BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	Exported	2,207	C→T	34.1%	intergenic (–/‑771)	– / → eryR	–//vntifkey=4

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	Exported	2,207	0	C	T	34.1%	10615.0 / inf	8285	intergenic (–/‑771)	–/eryR	–//vntifkey=4
Reads supporting (aligned to +/- strand): ref base C (2242/3172); new base T (1157/1658); total (3432/4853)
Fisher's exact test for biased strand distribution p-value = 7.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.79e-06

Only 100 of 8387 total aligned reads displayed.

TGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCATGCTTGGAAAGTGGGGATTATG  >  Exported/2068‑2344

  cTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCt                                                                                                                                          >  8:152675/1‑139 (MQ=255)

    atataAATCCTGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTTGTTTATTAACAATC‑TTTTATTATTAGCCGACAAATTTCTACCTCAt                                                                                                                                       >  1:71147/2‑139 (MQ=255)

          aTCCTGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt                                                                                                                                  <  7:106009/139‑1 (MQ=255)

          aTCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGt                                                                                                                                  <  2:316067/139‑1 (MQ=255)

          aTCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt                                                                                                                                  <  2:216391/139‑1 (MQ=255)

          aTCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt                                                                                                                                  <  3:351992/139‑1 (MQ=255)

          aTCCGGGAAACATTTTTACATAGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt                                                                                                                                  <  7:75506/139‑1 (MQ=255)

          aTCCGGGAAACATGTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGt                                                                                                                                  <  7:335969/139‑1 (MQ=255)

             cGGGAAACATTTTTACATCGTTAGAAGTGAAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTAACCCGAATCTCggcgc                                                                                                                               >  2:185775/1‑135 (MQ=255)

               ggAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCtt                                                                                                                             >  1:297266/1‑139 (MQ=255)

               ggAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATCTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCtt                                                                                                                             >  7:309023/1‑139 (MQ=255)

                 taaCATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTTCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTta                                                                                                                           <  5:30586/138‑1 (MQ=255)

                            cATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCtttattt                                                                                                                <  3:73811/139‑1 (MQ=255)

                              tCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCtttatttta                                                                                                              <  8:12981/139‑1 (MQ=255)

                              tCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTAGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCtttatttta                                                                                                              <  1:128297/139‑1 (MQ=255)

                               ctttAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTAAAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTATCTTTATATAtttatttta                                                                                                              >  6:366152/3‑138 (MQ=255)

                               cGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCtttattttat                                                                                                             >  3:95740/1‑139 (MQ=255)

                               cGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt                                                                                                                                  <  2:244553/118‑1 (MQ=255)

                               cGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCtttatttta                                                                                                              >  4:319783/1‑138 (MQ=255)

                               cGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCACTCATCTCGTCTCATTATATCtttatttta                                                                                                              >  1:271237/1‑138 (MQ=255)

                               cGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGACGTCAAATTTCTCCCTCAtctctt                                                                                                                                  >  1:244553/1‑116 (MQ=255)

                                    gAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATaa                                                                                                        <  3:134412/139‑1 (MQ=255)

                                    gAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATa                                                                                                         <  3:109243/138‑1 (MQ=255)

                                       gTGCAAGTCCAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAgg                                                                                                     <  6:170835/139‑1 (MQ=255)

                                       gTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCTAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAgg                                                                                                     <  6:22943/139‑1 (MQ=255)

                                       gTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAgg                                                                                                     <  5:196936/139‑1 (MQ=255)

                                       gTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAgg                                                                                                     <  1:160550/139‑1 (MQ=255)

                                         gCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAAATTCTACCTAAGCTCCTCTCATTATATATTTTTTTTATAATAAAGGAg                                                                                                   >  1:96050/1‑139 (MQ=255)

                                          caagtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCttt                                                                                                                            >  8:200741/1‑113 (MQ=255)

                                          caagtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATa                                                                                                         <  3:243394/132‑1 (MQ=255)

                                          caagtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAgg                                                                                                     <  6:110358/136‑1 (MQ=255)

                                          caagtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAg                                                                                                   >  7:257232/1‑138 (MQ=255)

                                                aagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTg                                                                                             >  4:61344/1‑138 (MQ=255)

                                                  gtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGt                                                                                                                                  <  3:213070/99‑1 (MQ=255)

                                                  gtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAgg                                                                                                     <  7:5138/128‑1 (MQ=255)

                                                     atatGTATCTATAATGATTTGTGGAAGGTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCTCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCg                                                                                        <  5:249519/138‑1 (MQ=255)

                                                        tGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcgcg                                                                                   <  1:100494/139‑1 (MQ=255)

                                                          tATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcgcg                                                                                   <  3:269911/138‑1 (MQ=255)

                                                            tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGt                                                                                                                                  <  4:227584/89‑1 (MQ=255)

                                                            tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATTTCTTTATTTTTTCATAAAGGAGTATTTGAACCGTCGCGCgg                                                                                >  6:254461/1‑139 (MQ=255)

                                                            tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCgg                                                                                >  2:87447/1‑139 (MQ=255)

                                                            tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCgg                                                                                >  8:176690/1‑139 (MQ=255)

                                                            tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGtc                                                                                                                                 >  2:64086/1‑90 (MQ=255)

                                                            tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATGTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCgg                                                                                >  8:321776/1‑139 (MQ=255)

                                                            tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAgg                                                                                                     <  4:17297/118‑1 (MQ=255)

                                                            tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcgcg                                                                                   >  8:71968/1‑136 (MQ=255)

                                                            tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCgg                                                                                >  7:226485/1‑139 (MQ=255)

                                                            tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCgg                                                                                >  3:299442/1‑139 (MQ=255)

                                                            tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCgg                                                                                >  1:42970/1‑139 (MQ=255)

                                                             cTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTTTTTTGTCATAAAGGAGTTTTTGATCCGTCGCGCggg                                                                               >  7:99586/1‑139 (MQ=255)

                                                             cTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGgggg                                                                               >  6:55436/1‑139 (MQ=255)

                                                             cTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCggg                                                                               >  5:112369/1‑139 (MQ=255)

                                                              tataATGATTTGTGGTAGTTTTGCGTCAACATTTGGGTTATTTTCAATCTTTTTTTTATTAGCCGTCATATTGCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAACGGATTATTTGAACCGTCGCGCGTGa                                                                              <  2:269092/139‑1 (MQ=255)

                                                               ataATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTACTTTATCATAAAGGAGTATTTGAACCGTCGCGAGGGa                                                                              <  4:146141/138‑1 (MQ=255)

                                                               ataATGATTTGTGGAAGCCTAGCCACAACAGTTGGTTTATTTACAATCTATTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGAc                                                                             <  5:363472/139‑1 (MQ=255)

                                                                taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCTCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGAc                                                                             <  1:349696/138‑1 (MQ=255)

                                                                taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa                                                                              <  5:274312/137‑1 (MQ=255)

                                                                taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa                                                                              >  5:141529/1‑137 (MQ=255)

                                                                  aTGATTTGTGGAAGTTTTGCCACAACAGTTGGATTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCtttatttta                                                                                                              >  5:225684/1‑103 (MQ=255)

                                                                     aTTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCTCGCGGGACAGGtt                                                                        >  2:125123/1‑138 (MQ=255)

                                                                      tttGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa                                                                              >  8:44622/1‑131 (MQ=255)

                                                                        tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa                                                                              <  7:283028/129‑1 (MQ=255)

                                                                        tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTAt                                                                     >  3:44806/1‑138 (MQ=255)

                                                                        tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAgg                                                                                                     <  7:180928/106‑1 (MQ=255)

                                                                        tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGaa                                                                                           <  4:198724/116‑1 (MQ=255)

                                                                        tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGAc                                                                             <  4:87512/130‑1 (MQ=255)

                                                                        tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTAt                                                                     >  4:371573/1‑138 (MQ=255)

                                                                          tgGAAGTTTTGCCACAACAGTTGTTTTATTTACAATCTTTTTTTTATTAGCAGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCTGGACAGGTTTATGa                                                                   <  8:349328/138‑1 (MQ=255)

                                                                          tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGAt                                                                  >  7:132463/1‑139 (MQ=255)

                                                                          tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcgcg                                                                                   >  2:373171/1‑122 (MQ=255)

                                                                          tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa                                                                              <  8:271771/127‑1 (MQ=255)

                                                                          tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTAGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAAcct                                                                                        >  1:192767/1‑116 (MQ=255)

                                                                          tgGAAGTGTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGa                                                                   <  6:280154/138‑1 (MQ=255)

                                                                            gAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAg                                                                <  4:341619/139‑1 (MQ=255)

                                                                              aGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAggg                                                              <  8:297213/139‑1 (MQ=255)

                                                                                       acaacaGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTAt                                                     <  3:190248/139‑1 (MQ=255)

                                                                                         aacaGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTAtt                                                    >  5:81645/1‑138 (MQ=255)

                                                                                                  tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                          <  6:8157/139‑1 (MQ=255)

                                                                                                  tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                          <  5:16832/139‑1 (MQ=255)

                                                                                                  tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                          <  3:326134/139‑1 (MQ=255)

                                                                                                  tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                          <  7:155495/139‑1 (MQ=255)

                                                                                                  tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                          <  7:20358/139‑1 (MQ=255)

                                                                                                  tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                          <  2:293680/139‑1 (MQ=255)

                                                                                                  tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                          <  6:137532/139‑1 (MQ=255)

                                                                                                  tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                          <  4:122597/139‑1 (MQ=255)

                                                                                                  tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                          <  1:319397/139‑1 (MQ=255)

                                                                                                  tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                          <  8:25130/139‑1 (MQ=255)

                                                                                                   ttatttaCTATCTTTTTTTTTTTAGCCGTCTATTTTCTCCCTCATCTCGTCTGTTTTTATCTTTATTTTATCATAAATGAGTTTTTGAAGCGTCGCGAGTTATTGGTTTTTGATAGGTATATTTTATTGAATAtttta                                          <  6:336172/138‑3 (MQ=255)

                                                                                                   ttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGAt                                         >  1:221441/1‑139 (MQ=255)

                                                                                                   ttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                          >  7:360408/1‑138 (MQ=255)

                                                                                                   ttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                          <  4:258596/138‑1 (MQ=255)

                                                                                                           aaTCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTTTTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAg                                 >  2:158396/1‑139 (MQ=255)

                                                                                                           aaTCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAg                                 >  5:333124/1‑139 (MQ=255)

                                                                                                            aTCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGa                                                                   <  5:5573/104‑1 (MQ=255)

                                                                                                            aTCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAgg                                <  3:162858/139‑1 (MQ=255)

                                                                                                                tttttttATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACt                            >  8:225271/1‑139 (MQ=255)

                                                                                                                 ttttttATTAGCCGTCAAATTTCTCCTTCAACTCGTCTCTTTATATCTGTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATTTTTTTTTGTATATTTTATGGTATAATGGACtt                           >  6:305435/1‑139 (MQ=255)

                                                                                                                 tattttATTAGCCCTCAAATTTCTCCTTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGa                              <  2:347284/134‑1 (MQ=255)

                                                                                                                   ttttATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACttt                          <  6:202336/138‑1 (MQ=255)

                                                                                                                     ttattaGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCa                        <  4:290871/138‑1 (MQ=255)

TGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCATGCTTGGAAAGTGGGGATTATG  >  Exported/2068‑2344

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`