| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,183,703 | C→T | 5.5% | P274L (CCG→CTG) | U712_05870 → | Oligopeptide‑binding protein oppA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,183,703 | 0 | C | T | 5.5% | 288.9 / 3.7 | 90 | P274L (CCG→CTG) | U712_05870 | Oligopeptide‑binding protein oppA |
| Reads supporting (aligned to +/- strand): ref base C (47/38); new base T (2/3); total (49/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TATTACTCTCGAAAAAAATGACCAGTATTGGGATAAAGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCAACACTGAAGCTAAGCCATTAGACAACGTCAATATCCGTAAAGC > CP006881/1183566‑1183841 | tATTACTCTCGAAAAAAATGACCAGTATTGGGATAAAGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCg > 6:213302/1‑139 (MQ=255) aCTCTCGAAAAAAATGACCAGTATTGGGATAAAGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTAGATTGGGCCGGTATGCCGCTCg > 2:234571/1‑139 (MQ=255) ctcGAAAAAAATGACCAGTATTGGGATAAAGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGAc > 7:255931/1‑139 (MQ=255) tcGAAAAAAATGACCAGTATTGGGATAAAGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGa < 1:4189/137‑1 (MQ=255) tcGAAAAAAATGACCAGTATTGGGATAAAGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGa < 6:274633/137‑1 (MQ=255) gAAAAAAATGACCAGTATTGGGATAAAGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGc > 7:219834/1‑139 (MQ=255) gAAAAAAATGACCAGTATTGGGATAAAGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGc > 6:261267/1‑139 (MQ=255) aaaaaTGACCAGTATTGGGATAAAGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTc < 8:255931/139‑1 (MQ=255) tGACCAGTATTGGGATAAAGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGa > 8:71031/1‑137 (MQ=255) aCCAGTATTGGGATAAAGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAg > 8:122232/1‑138 (MQ=255) tATTGGGATAAAGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATccc > 8:186450/1‑139 (MQ=255) ggATAAAGACAAAGTCAAACTGAAGAATATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCg > 3:356890/1‑139 (MQ=255) aTAAATACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTCGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCTACAGAATCCCTGCAGAc > 5:120450/1‑139 (MQ=255) aTAAAGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGAc > 8:186288/1‑139 (MQ=255) tAAAGACAAAGTCAAACTGATTAAAATCTATTTGGTTATGATCAACAATTAAAATCCGTAACTAAAAAAATTCCAAGCTGGCGAAATTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGAAAGAATCCCTGCCGAcc < 6:320590/139‑1 (MQ=255) tAAAGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGAcc < 7:186450/139‑1 (MQ=255) aaaGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGAccc < 7:300553/139‑1 (MQ=255) aaaGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGAccc > 1:25469/1‑139 (MQ=255) aaGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGACCTTGATTGTGCCGGTATGCCGCTCGGCCAGCTTCCGCCAGCATCCCTGCCGACCCt > 6:104300/1‑139 (MQ=255) aaGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGAc < 6:175313/121‑1 (MQ=255) aaGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGAc > 5:175313/1‑121 (MQ=255) aaGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCt > 5:227535/1‑139 (MQ=255) aaGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCt > 6:334598/1‑139 (MQ=255) aaGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCt > 1:116347/1‑139 (MQ=255) aaGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCt > 4:137924/1‑139 (MQ=255) aaGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCt > 3:308358/1‑139 (MQ=255) aaGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCt > 1:137449/1‑139 (MQ=255) aaGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCt > 1:21169/1‑139 (MQ=255) aaGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATAGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCt > 7:366216/1‑139 (MQ=255) aaaGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCGGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGCCCCTGaaa > 4:295611/1‑138 (MQ=255) aaaGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGaaa > 1:38281/1‑138 (MQ=255) aGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAg > 7:168693/1‑106 (MQ=255) aGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAg < 8:168693/106‑1 (MQ=255) aGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGaaaa > 2:26093/1‑137 (MQ=255) cAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGa < 5:334598/138‑1 (MQ=255) aagaaAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGa > 7:55133/1‑131 (MQ=255) aagaaAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGa < 8:55133/131‑1 (MQ=255) atatGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGa > 3:132582/1‑139 (MQ=255) tatGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAg < 5:261267/139‑1 (MQ=255) tGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGcc < 1:26093/139‑1 (MQ=255) ggTTATCATCAACAAAAACATTACGTAAATAAAAAAATTCCACGCTGGCCAACTTGTTGGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGcc < 4:356890/138‑1 (MQ=255) tATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGa < 1:67771/114‑1 (MQ=255) tATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGa > 2:67771/1‑114 (MQ=255) tGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTg < 7:186288/138‑1 (MQ=255) aTCAACAATAACAATACGGACCTAAAAAATTTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCGCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAg < 1:234571/139‑1 (MQ=255) aTCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTCGGCCGGTATGCCGATCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAg > 3:235541/1‑139 (MQ=255) aTCAACAATAACAATACGCAACTAAAAAAATTCCAAGCTGGCGAACTTGAGTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAg < 8:187928/139‑1 (MQ=255) aTCAACAATAAAAAAACGTAACTAAAAAAATACCAAGCTGGCGAACTTTATTGGGCGGGTATGCCGGTCGTACAGCTTCCGAATGAATCGGTGCGGACCCTTAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAg < 6:227535/139‑1 (MQ=255) tCAAAAAAAACAATACGTAAATAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGTACTGCTTCCGACATAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAg < 4:132582/138‑1 (MQ=255) caacaaTAACAATACGCAAAAAAAAAAATTCCAAGCGGGCGAACTTGCTGGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGa < 8:212328/139‑1 (MQ=255) aacaataacaatACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAg < 7:122232/139‑1 (MQ=255) aaaaataacaataCGTAAATAAAAAAATTCCCAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAg < 3:101947/136‑1 (MQ=255) acaataacaataCGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAgt > 6:50305/1‑139 (MQ=255) caataacaataCGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCTGCTCGGACAGCTTCCGa > 7:12690/1‑77 (MQ=255) caataacaataCGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCTGCTCGGACAGCTTCCGa > 7:18089/1‑77 (MQ=255) caataacaataCGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCTGCTCGGACAGCTTCCGa < 8:18089/77‑1 (MQ=255) caataacaataCGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCTGCTCGGACAGCTTCCGa < 8:12690/77‑1 (MQ=255) caataacaataCGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAgtg > 2:216974/1‑139 (MQ=255) caataCGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTgg > 1:138217/1‑139 (MQ=255) taCGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTa > 2:372441/1‑138 (MQ=255) taCGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTa > 4:344137/1‑138 (MQ=255) aaCGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTAGGACAGCTTCCTACAGAATCCCTGCCGACCCTGAAAAAAGACTGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTAc < 3:166108/138‑1 (MQ=255) aCGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTAc > 6:299875/1‑138 (MQ=255) aCGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTAc > 3:207154/1‑138 (MQ=255) cGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCttt < 7:134179/103‑1 (MQ=255) cGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCttt > 8:134179/1‑103 (MQ=255) cGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACa > 6:355017/1‑138 (MQ=255) cGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACa > 6:322083/1‑138 (MQ=255) aaCTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTc > 4:217491/1‑50 (MQ=255) aaCTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTc < 3:217491/50‑1 (MQ=255) aaCTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAAtt > 1:354474/1‑139 (MQ=255) aaCTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAAt > 3:25526/1‑138 (MQ=255) aCTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTc < 3:137924/139‑1 (MQ=255) aCTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTc < 5:299875/139‑1 (MQ=255) tAAAAAAATTCCAAGCTGGCGAACTTGATAGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAACAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCaa < 8:366216/139‑1 (MQ=255) aaaaaaTTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCAaca < 2:38281/139‑1 (MQ=255) aaaaTTCCAAGCTGGCGAACTTTATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCAACACt < 5:79791/139‑1 (MQ=255) aaaaTTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCAACACt < 4:308358/139‑1 (MQ=255) aTTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCAACACTg > 3:194195/1‑137 (MQ=255) tCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCAACACTGAAGc > 5:281997/1‑139 (MQ=255) ctttcTGTCGAAGTTTATTGGTCCGGTTTCGTGCTGGGACTGCTTCCTAGTGAATCCCTGGCGTTCATGAAAAAAGAGTTTTCTTTACATGTTGAGGCGATTGCAGGAGTGTATTGGTACAAATTCAACACTGAAGCTa < 6:120450/135‑1 (MQ=255) cacgCTGGCTAAGTTGATGGGGCCGGAATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAACGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCAACACTGAAGCTa < 5:213302/136‑1 (MQ=255) aCTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAAATCAACACTGAAGCTAAGCCATTAGAc < 1:216974/139‑1 (MQ=255) cTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCAACACTGAAGCTAAGCCATTAGACa < 2:21169/139‑1 (MQ=255) cTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCAACACTGAAGCTAAGCCATTAGACa < 4:194195/139‑1 (MQ=255) cTTGATTGGGCCGGTAGGCCGCGCGGACCGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCAACACTGAAGCTAAGCCATTAGACa < 6:332213/139‑1 (MQ=255) ggCCGGAATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAAATCAACACTGAAGCTAAGCCATTAGACAACGTCAat < 2:137449/139‑1 (MQ=255) gTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCAACACTGAAGCTAAGCCATTAGACAACGTCAATATCCg > 3:132523/1‑139 (MQ=255) tATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCAACACTGAAGCTAAGCCATTAGACAACGTCAATATCCg > 8:345328/1‑138 (MQ=255) tGCCGCGCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCAACACTGAAGCTAAGCCATTAGACAACGTCAATATCCGTa < 5:100561/138‑1 (MQ=255) cGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTCCAAATTCAACACTGAAGCTAAGCCATTAGACAACGTCAATATCCGTAAAGc > 5:194044/1‑139 (MQ=255) | TATTACTCTCGAAAAAAATGACCAGTATTGGGATAAAGACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGAACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATGTTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCAACACTGAAGCTAAGCCATTAGACAACGTCAATATCCGTAAAGC > CP006881/1183566‑1183841 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |