| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,320,908 | G→A | 5.3% | intergenic (+313/+65) | U712_06725 → / ← U712_06730 | Hypothetical Protein/putative serine protease do‑like protein htrA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,320,908 | 0 | G | A | 5.3% | 258.8 / 2.7 | 75 | intergenic (+313/+65) | U712_06725/U712_06730 | Hypothetical Protein/putative serine protease do‑like protein htrA |
| Reads supporting (aligned to +/- strand): ref base G (44/27); new base A (2/2); total (46/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
GAAAAGCCAATCCTGCGCAGATCATACCCAGTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAATTTTTTTCGTCATTTCTTTG > CP006881/1320770‑1321027 | gaaaagCCAATCCTGCGCAGATCATACCCAGTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAg < 6:29149/139‑1 (MQ=255)gaaaagCCAATCCTGCGCAGATCATACCCAGTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAg < 8:255633/139‑1 (MQ=255) ccAATCCTGCGCAGATCATACCCAGTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAAt < 1:59348/139‑1 (MQ=255) aTCCTGCGCAGATCATACCCAGTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAg < 5:170261/139‑1 (MQ=255) cgcAGATCATACCCAGTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCttt > 8:191725/1‑139 (MQ=255) aGATCATACCCAGTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAAAGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTAt < 2:295691/139‑1 (MQ=255) aTCATACCCAGTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAAtt < 1:231832/126‑1 (MQ=255) aTCATACCCAGTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAAtt > 2:231832/1‑126 (MQ=255) cccAGTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATaaa < 4:91034/139‑1 (MQ=255) cccAGTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGAATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATaaa < 6:213438/139‑1 (MQ=255) gTCCCCCGGTTTTCAGGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGc > 8:249833/1‑139 (MQ=255) gTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGc > 6:275577/1‑139 (MQ=255) gTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGc > 6:347975/1‑139 (MQ=255) gTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGACAGAAAGTTTCATAg < 8:172102/109‑1 (MQ=255) gTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGACAGAAAGTTTCATAg > 7:172102/1‑109 (MQ=255) cACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTc > 8:70209/1‑138 (MQ=255) cGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGa > 1:19408/1‑139 (MQ=255) ggTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGAc < 2:323204/139‑1 (MQ=255) ttcatgttcatgCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCt > 1:7869/1‑139 (MQ=255) ttcatgttcatgCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCt > 6:13256/1‑139 (MQ=255) ttcatgttcatgCCTCCTAGCAAACGATGTTTCTAGCATCAGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCt > 5:229416/1‑139 (MQ=255) atgttcatgCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGGCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTATGTCTTTTATCTAATAAAAAGCCTCAGACCGCtttt < 6:313648/139‑1 (MQ=255) tgttcatgCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTa < 2:144421/139‑1 (MQ=255) tgttcatgCCTCCTAGCAAACGATGTATCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTa < 4:202326/139‑1 (MQ=255) catgCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGc > 3:238991/1‑139 (MQ=255) catgCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGc > 7:27227/1‑139 (MQ=255) catgCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGc > 5:100628/1‑139 (MQ=255) catgCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAAAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGc > 6:326822/1‑139 (MQ=255) catgCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAAAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGc > 6:332123/1‑139 (MQ=255) cctcctAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTg < 7:191725/138‑1 (MQ=255) cctcctAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTg < 6:123307/138‑1 (MQ=255) cctcctAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTg < 5:347975/138‑1 (MQ=255) cctcctAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTg < 5:151979/138‑1 (MQ=255) cctcctAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTg < 6:97359/138‑1 (MQ=255) cctcctAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTg < 3:335933/138‑1 (MQ=255) cctcctAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTg < 8:171408/138‑1 (MQ=255) cctcctAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAAAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTg < 5:332123/138‑1 (MQ=255) cctcctAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAAAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTg < 5:326822/138‑1 (MQ=255) ctAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATaaa > 7:220646/1‑108 (MQ=255) ctAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATaaa < 8:220646/108‑1 (MQ=255) ctAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCa > 5:168590/1‑139 (MQ=255) tttCTAGCATCTGATGTGAATGATGTCTATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACg < 3:134514/138‑1 (MQ=255) gCATCTGATGTGAATGATTTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACTGCCTGAGGCATTATTTCTTACTAAGtttt > 2:244677/1‑139 (MQ=255) cTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACg < 4:19462/128‑1 (MQ=255) cTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACg > 3:19462/1‑128 (MQ=255) cTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTctct > 5:38904/1‑139 (MQ=255) aaTGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTa < 1:28439/96‑1 (MQ=255) aaTGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTa > 2:28439/1‑96 (MQ=255) aaTGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCttttt > 6:49056/1‑138 (MQ=255) atttCAATCTGTATGATATACGGATATCTCGTCATAAAGTTTCATAGAACAATTATGTATTTTATATAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATc < 1:244677/135‑1 (MQ=255) atgTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATc < 7:70209/138‑1 (MQ=255) tgTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTa > 4:282934/1‑91 (MQ=255) tgTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTa < 3:282934/91‑1 (MQ=255) tgTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATc > 8:21674/1‑137 (MQ=255) tgTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATc > 6:116374/1‑137 (MQ=255) tgTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTATTCTTTTTGATc > 3:233262/1‑137 (MQ=255) gTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTg > 8:159499/1‑97 (MQ=255) gTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTg < 7:159499/97‑1 (MQ=255) aTCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGttt > 7:199419/1‑138 (MQ=255) tATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAAtttt > 2:250380/1‑139 (MQ=255) tATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAAtttt > 7:46057/1‑139 (MQ=255) tGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAAtttttt > 1:223899/1‑139 (MQ=255) tGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAAttttt < 6:100628/138‑1 (MQ=255) ataCGGATATATCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCAAGTTTAATTTTTTTCGt > 3:84761/1‑139 (MQ=255) taCGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAATTTTTTTCGt > 1:347684/1‑138 (MQ=255) aCGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAATTTTTTTCGtga > 3:206724/1‑137 (MQ=255) aCGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAATTTTTTTCGTCa > 8:63818/1‑139 (MQ=255) ggATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTATTTTTTTTCGTCAtt > 2:235210/1‑139 (MQ=255) ggATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAATTTTTTTCGTCAtt > 1:290416/1‑139 (MQ=255) ggATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAATTTTTTTCGTCAtt > 5:153598/1‑139 (MQ=255) atatCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAATTTTTTTCGTCATTTc > 8:121528/1‑139 (MQ=255) atCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAATTTTTTTCGTCATTTCtt > 4:160804/1‑139 (MQ=255) atCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAATTTTTTTCGTCATTTCtt > 3:281995/1‑139 (MQ=255) tctcGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGCCCGCTTTTACGCCCTGAGGCATTATGTATGTCGATGTTTTCTCATATTTTTTCTCCTGTTTAATTTTTTTCGTCATTTCttt > 6:48459/1‑139 (MQ=255) tctcGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAATTTTTTTCGTCATTTCttt > 5:267890/1‑139 (MQ=255) tctcGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAATTTTTTTCGTCATTTCttt > 7:341430/1‑139 (MQ=255) tctcGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAATTTTTTTCGTCATTTCtt < 3:160804/138‑1 (MQ=255) tctcGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAATTTATTTCGTCATTTCttt > 6:341109/1‑139 (MQ=255) ctcGTCAGAAGGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAATTTATTTAGTCATTTATTTg > 4:71293/1‑139 (MQ=255) | GAAAAGCCAATCCTGCGCAGATCATACCCAGTCCCACGGTTTTCATGTTCATGCCTCCTAGCAAACGATGTTTCTAGCATCTGATGTGAATGATGTCAATCTGTATGATATACGGATATCTCGTCAGAAAGTTTCATAGAACAATTAGGTCTTTTATCTAATAAAAAGCCTCAGACCGCTTTTACGGCCTGAGGCATTATGTCTTACGAAGTTTTCTCTTCTTTTTGATCCAGTTTAATTTTTTTCGTCATTTCTTTG > CP006881/1320770‑1321027 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |