| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,345,152 | A→G | 14.4% | P32P (CCA→CCG) | U712_06865 → | Organic hydroperoxide resistance protein ohrB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,345,152 | 0 | A | G | 14.4% | 263.7 / 35.4 | 104 | P32P (CCA→CCG) | U712_06865 | Organic hydroperoxide resistance protein ohrB |
| Reads supporting (aligned to +/- strand): ref base A (45/44); new base G (7/8); total (52/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
GAAATATAACAACTAGATACAAATAAGGAGGTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAAGAGCAGAATATCGAAATTGATTCGGAGATTGAAGGG > CP006881/1345017‑1345287 | gAATTATAACAACTAGATACAAATAAGGAGGTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGAGTTTGATATTGTCatgccaaat > 3:84225/1‑139 (MQ=255)gAAATATAACAACTAGATACAAATAAGGAGGTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCatgccaaat > 3:148997/1‑139 (MQ=255)gAAATATAACAACTAGATACAAATAAGGAGGTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCatgccaaat > 7:19201/1‑139 (MQ=255) caacTAGATACAAATAAGGAGGTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCaaaaaa > 2:275315/1‑139 (MQ=255) aGATACAAATAAGGAGGTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAaagaag > 3:172383/1‑138 (MQ=255) gATACAAATAAGGAGGTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCGAATGCCAAAAAAGAAGGa > 5:107258/1‑139 (MQ=255) gATACAAATAAGGAGGTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGa < 7:233995/139‑1 (MQ=255) gATACAAATAAGGAGGTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGa < 7:71039/139‑1 (MQ=255) tACAAATAAGGAGGTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGAc > 5:106821/1‑138 (MQ=255) aaaTAAGGAGGTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAAc > 6:138049/1‑139 (MQ=255) aaaTAAGGAGGTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAAc > 5:50723/1‑139 (MQ=255) aTAAGGAGGTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCg > 7:42449/1‑139 (MQ=255) ggaggTTGGGAAATATGGCACTATTTACATCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCGAATGCCAAAAAAGAAGGACAAACCGGcac < 3:299912/139‑1 (MQ=255) ggaggTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCGAATGCCAAAAAAGAAGGACAAACCGGcac < 2:262703/139‑1 (MQ=255) ggaggTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGcac < 5:252712/139‑1 (MQ=255) gaggTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGcac < 7:145610/138‑1 (MQ=255) gTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGa > 4:115422/1‑124 (MQ=255) gTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGa < 3:115422/124‑1 (MQ=255) gTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAAt > 7:4332/1‑139 (MQ=255) gTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAAt > 7:112420/1‑139 (MQ=255) gTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAAt > 7:42126/1‑139 (MQ=255) gTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAAt > 1:49319/1‑139 (MQ=255) atGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGc > 4:370294/1‑139 (MQ=255) atGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGc > 4:75562/1‑139 (MQ=255) ggCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGctc > 6:41822/1‑139 (MQ=255) ggCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGctc > 6:36928/1‑139 (MQ=255) tttACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCgg < 8:350601/139‑1 (MQ=255) tttACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCgg > 7:273963/1‑139 (MQ=255) tttACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCg < 1:275315/138‑1 (MQ=255) tttACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCg < 3:370294/138‑1 (MQ=255) ttACAGCAAACGTAACCGCGCGAGGCGTACGATCAGCACATATTACATCAGATGACGGTGTTCTGGATTTTGATATTGTCATGCCAACTGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGc < 6:335993/139‑1 (MQ=255) tACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGc < 8:42449/138‑1 (MQ=255) tACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGc < 5:36928/138‑1 (MQ=255) tACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGc < 5:41822/138‑1 (MQ=255) tACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGc < 2:50372/138‑1 (MQ=255) aCAGCAAAAGCAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGCCGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAACAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAg < 1:300839/139‑1 (MQ=255) cAGCAAAAGTACCCGCGCGCGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCAAGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAg < 3:237011/138‑1 (MQ=255) cAGCAAAAGTACCCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAgg < 5:297668/139‑1 (MQ=255) cAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATTCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAgg < 3:75562/139‑1 (MQ=255) cAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAgg < 6:27390/139‑1 (MQ=255) gCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCGAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGt < 6:107258/139‑1 (MQ=255) aaGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCGAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTAtgc > 7:259347/1‑139 (MQ=255) aaGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGc < 3:157214/130‑1 (MQ=255) aaGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGc < 3:162786/130‑1 (MQ=255) aaGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGc > 4:162786/1‑130 (MQ=255) aaGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGc > 4:157214/1‑130 (MQ=255) aaGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTAtgc > 1:291375/1‑139 (MQ=255) aaGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTAtgc > 1:372662/1‑139 (MQ=255) tAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGAC‑AACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCa < 3:93033/139‑1 (MQ=255) aCCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCGAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCa < 8:259347/138‑1 (MQ=255) aCCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCa < 4:85012/138‑1 (MQ=255) aCCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCa < 4:148997/138‑1 (MQ=255) cgcgcgAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACTAATCCGGAACAGCTCTTTGCGGCAGCGTATGCTGCATGc > 7:336219/1‑139 (MQ=255) cgAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTcg > 2:147978/1‑139 (MQ=255) gCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTcggcgg < 6:50723/139‑1 (MQ=255) ggACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGgcggcg > 4:82201/1‑139 (MQ=255) ggACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGgcggcg < 8:112420/139‑1 (MQ=255) gCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCg < 4:172383/139‑1 (MQ=255) ggACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGGAGGACAAACCGCCACAAATCCGGAACAGATCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGacc > 1:18633/1‑137 (MQ=255) ggACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGaa > 3:177281/1‑138 (MQ=255) gaaatatTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAaca < 5:227223/136‑1 (MQ=255) atTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTcggcgg > 8:171977/1‑122 (MQ=255) atTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTcggcgg < 7:171977/122‑1 (MQ=255) atTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAg > 1:328285/1‑139 (MQ=255) atTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAg > 1:131299/1‑139 (MQ=255) atTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAg > 8:21145/1‑139 (MQ=255) atTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAg > 3:271960/1‑139 (MQ=255) cATGAGATGACGGTGTTCTTGATTTTGATATTGTCATGACAAATGCCAAAAAAGCAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATTCTGCATGCTGCGGCGGCGAGCTCGAACACGTAGACa < 7:216933/138‑1 (MQ=255) cATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCa < 4:174645/138‑1 (MQ=255) aTCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCGAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCtt > 2:93440/1‑87 (MQ=255) aTCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCGAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCtt < 1:93440/87‑1 (MQ=255) aTCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAgg > 8:150937/1‑96 (MQ=255) cAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCGAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCa < 1:162709/135‑1 (MQ=255) cAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCGAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCa > 6:92045/1‑135 (MQ=255) cAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCGAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCa > 2:162709/1‑135 (MQ=255) cAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCGAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCa < 5:92045/135‑1 (MQ=255) cAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCa < 6:312808/104‑1 (MQ=255) cAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCa > 5:312808/1‑104 (MQ=255) cAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCg < 3:337359/123‑1 (MQ=255) cAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCg > 4:337359/1‑123 (MQ=255) aGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAagag < 6:106821/139‑1 (MQ=255) aGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAaga < 2:131299/138‑1 (MQ=255) gATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAagag > 7:42564/1‑138 (MQ=255) aTGACGGTGTTCTTGATTTTGATATTGTCATGCCGAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCa < 6:324387/132‑1 (MQ=255) aTGACGGTGTTCTTGATTTTGATATTGTCATGCCGAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGAAGCCa > 5:324387/1‑132 (MQ=255) aTGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAagag > 5:94494/1‑137 (MQ=255) aTGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCAAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAGCACGTAGCCAAagag > 4:330890/1‑137 (MQ=255) tGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAAGAGCAg < 8:273963/139‑1 (MQ=255) aCGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAAGAGCAGa < 3:82201/138‑1 (MQ=255) ttCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAACTCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAAGAGCAGAATATCg > 5:141979/1‑138 (MQ=255) ttCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAAGAGCAGAATATCg > 8:34288/1‑138 (MQ=255) ttGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGctct > 7:123822/1‑63 (MQ=255) ttGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGctct < 8:123822/63‑1 (MQ=255) gATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCGCGAACACGTAGCCAAAGAGCAGAATATCGAAATTGATTCg < 2:291375/138‑1 (MQ=255) gTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCa < 7:167638/75‑1 (MQ=255) gccaaatgccaaaAAAGAAGGACAAACCTGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAAGAGCAGAATATCGAAATTGATTCGGAGATTg < 8:332478/134‑1 (MQ=255) gccaaatgccaaaAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAagag > 3:123287/1‑106 (MQ=255) gccaaatgccaaaAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAagag < 4:123287/106‑1 (MQ=255) gccaaatgccaaaAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAAGAGCAGAATATCGAAATTGATTCGGAGATTg > 7:332478/1‑134 (MQ=255) gccaaatgccaaaAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAAGAGCAGAATATCGAAATTGATTCGGAGATTGAAggg > 3:81117/1‑139 (MQ=255) | GAAATATAACAACTAGATACAAATAAGGAGGTTGGGAAATATGGCACTATTTACAGCAAAAGTAACCGCGCGAGGCGGACGAGCAGGACATATTACATCAGATGACGGTGTTCTTGATTTTGATATTGTCATGCCAAATGCCAAAAAAGAAGGACAAACCGGCACAAATCCGGAACAGCTCTTTGCGGCAGGGTATGCTGCATGCTTCGGCGGCGCGCTCGAACACGTAGCCAAAGAGCAGAATATCGAAATTGATTCGGAGATTGAAGGG > CP006881/1345017‑1345287 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |