| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 186,066 | T→G | 30.5% | K126N (AAA→AAC) | U712_00845 ← | Uncharacterized protein ybbC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 186,066 | 0 | T | G | 30.5% | 79.0 / 21.3 | 64 | K126N (AAA→AAC) | U712_00845 | Uncharacterized protein ybbC |
| Reads supporting (aligned to +/- strand): ref base T (8/36); new base G (18/2); total (26/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.73e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAGGGCCGAATAAAGCTGTCAGTTTGATATCCGGG > CP006881/185933‑186204 | tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGGCATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGtttttt > 7:154023/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAATCATTTCTGGAGTCGGgttttt > 4:259539/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGCGTCGGtttttt > 5:184543/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGtttttt > 4:86694/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGtttttt > 8:45779/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGtttttt > 8:369856/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGtttttt > 7:230817/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGtttttt > 6:81973/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGtttttt > 1:10341/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGtttttt > 2:235834/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGtttttt > 1:69254/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGgttttt > 1:166300/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGgttttt > 6:85667/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGgttttt > 2:194190/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGgttttt > 3:311586/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGgtgttt > 6:118451/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGggtttt > 2:255341/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGggtttt > 5:25636/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTATGGAGTCGGtttttt > 4:285282/1‑139 (MQ=255)tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACAGTTTTAAGCATTTCTGGAGTCGGtttttt > 8:160243/1‑139 (MQ=255)tAAATGGAATGCCGTATTCTTTAGCGGCTTCCATAGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTATGCATTTCTGGAGTCGGgttttt > 2:30318/1‑139 (MQ=255) aaTGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCg < 6:372708/139‑1 (MQ=255) gAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGtttt < 6:188057/139‑1 (MQ=255) gAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGttt < 2:367271/138‑1 (MQ=255) cggtttCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTa < 8:154023/136‑1 (MQ=255) cGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTa < 8:230817/139‑1 (MQ=255) cGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTa < 5:245324/139‑1 (MQ=255) tCTTTTGCGGCTTCCTTTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTTGATTATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAgg < 4:294941/138‑1 (MQ=255) tCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGTTACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTagatg < 7:117373/138‑3 (MQ=255) tCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAgg < 1:235834/138‑1 (MQ=255) tCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAgg < 2:166300/138‑1 (MQ=255) tCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAgg < 3:285282/138‑1 (MQ=255) tCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAgg < 7:369856/138‑1 (MQ=255) tCTTTAGCGGCTTCCATTGAGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTACCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTCGTTTTTCCGTAGAgg < 8:223628/138‑1 (MQ=255) tCTTTAGCGGCGTCCATTGAGTATGCCATTGTATAAATGTACGTGTAGAACCGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAgg < 3:242959/138‑1 (MQ=255) tAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTAAAACATTAGAATATCGACATTTTTAAGCATTTCTGGATTCGGGTTTTTTGTTTTTTCGTTGTGGCTGtt > 2:303063/1‑138 (MQ=255) cGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTTGTTTTTGCGGAGAGGCTGTT‑T‑AAGTGA‑ACCCCggg > 4:215365/1‑138 (MQ=255) aTTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGt < 8:253903/139‑1 (MQ=255) aTTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGt < 3:40953/139‑1 (MQ=255) aTTGTATAAATGTACGTGTAGAAACGGGGCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGt < 2:227729/139‑1 (MQ=255) tGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGtttt < 2:336570/99‑1 (MQ=255) tGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAgg < 8:310683/109‑1 (MQ=255) tGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAgg > 7:310683/1‑109 (MQ=255) tGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTACGTTTTGGGGGTT‑T‑TAGGGG‑ACCCCGGGTTTTTCggg > 2:116613/1‑136 (MQ=255) tGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTGGTTTTTTCGGAGCGGCTGTT‑T‑ACGGGC‑GCCCCGGGTGTTTGGTc > 7:343860/1‑138 (MQ=255) tGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTGGTTTTTGCGTATAGGCTGTA‑T‑AAGGGG‑ACCCCGCGTTTTTGGtg > 4:166803/1‑137 (MQ=255) tGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTCGtttt > 1:336570/1‑99 (MQ=255) tGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATAGACATTTATAAGCATTTCTGGAGTCGGGTGTTTCGATTTTGCGTTGAGAGTGGA‑T‑AGGGGACGCCCCGGttttagggag > 2:116611/1‑133 (MQ=255) aaTGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTaa < 3:9603/139‑1 (MQ=255) aTGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAag < 3:215365/139‑1 (MQ=255) aCGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGGTTTTGCGTTTTGGCTGTA‑T‑TCGGGG‑ACCCCGGGTGTTTGGTCAATGGTAGAGcc > 5:325146/1‑139 (MQ=255) cGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGttt < 5:86421/86‑1 (MQ=255) cGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTTGTTTTTTCTTAGAGGGTGTT‑T‑ACGGGG‑ACCCCCGGTTTTTGGGGAATGTTAGAGcc > 7:319561/1‑138 (MQ=255) cGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTTGTTTTTGCGTAGAGGCGGTT‑T‑TCGGGG‑ACCCCGGGTGTTTGGTCAATGTTagaggc > 5:295706/1‑136 (MQ=255) cGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTTGTTTTTACGTAGACGCTGTT‑T‑TAGGGA‑ACCCCCGTGTTTTGGTGAATTTAAGATcc > 5:67986/1‑138 (MQ=255) cGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTTGTTTTTACGGTGAGGCGGTA‑T‑ACCGGC‑TCCCCCGGTTTTTGGTGAATGTaatggcc > 3:174200/1‑133 (MQ=255) cGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTGTTTTTTTGGTTTGGGGTGTT‑T‑TAGGGG‑ACCCCGGGTTTTTTGGGAATGTAagaggc > 1:193711/1‑136 (MQ=255) cGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTCGttt > 6:86421/1‑86 (MQ=255) cGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTCGGTTTTGCGTATAGGCTGTA‑T‑ACGGGC‑ATACCGGGTTTTTGGTCAATGTAAGAGcc > 7:360212/1‑138 (MQ=255) cGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTAGTTTTTACGTTTATGGACTATT‑ACGGGA‑ACCCC‑GTTTTATGTTAAAAGTAAGAGcc > 5:61123/1‑138 (MQ=255) tAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACtt < 5:221832/139‑1 (MQ=255) tAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACtt < 2:69254/139‑1 (MQ=255) accGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGtc < 3:133857/137‑1 (MQ=255) cgtgTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGtctc < 5:327781/136‑1 (MQ=255) gTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTCGTTTTTGCGTAGCGGCTGTA‑T‑ACGGGT‑CCCCCGGGTTTTTCGTCAATGTAAGAGCCTACGTCGTCTcccg > 5:131525/1‑137 (MQ=255) tCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGc < 1:79928/139‑1 (MQ=255) tCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCgg < 7:366419/138‑1 (MQ=255) cAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTGGTTTTTACGTAGAGGCTGTT‑T‑AAGGGA‑ACCCCGGGTTTTTCGTGAATGTTATAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCgggc > 8:366419/1‑137 (MQ=255) cAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTAGTTTTTGCGTTTAGGCTGTT‑TAAAGGTA‑ACCCCGG‑TTTTTAGTCAAATTTATAGCCTAACTCGTAGCCAGCCTGGGCGTGACcgcccgc > 4:91865/1‑135 (MQ=255) aaaGATTACACTATCGACATTTTAACGCAGATCTGGATGCGGTTTTATCGTTTTTCCGTAGCGGCTGTA‑A‑ACGGGA‑CCCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACg < 2:368735/139‑1 (MQ=255) aaaCATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACg < 2:325881/139‑1 (MQ=255) aaaCATTAGAATATCGACATTTTTAAGCATGTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACg < 4:278039/139‑1 (MQ=255) aaCATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGGGGTA‑T‑ACGGGA‑ACCCCGGTTTTTTGGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGGGACCGCGGACGc > 7:199097/1‑139 (MQ=255) aaCATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGGTTTTAGTTTTTAGGTTGAGGGTTTA‑T‑ACGGGG‑ACCCCGGTTTTTTCGTGAAAGTTATAGGCGTCATCGTCGGCAGCCTGGGCGGCACCGCGGgcgc > 2:317185/1‑139 (MQ=255) aCATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGcc < 6:349462/139‑1 (MQ=255) aCATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGcc < 2:284013/139‑1 (MQ=255) tAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCgtgt > 3:362677/1‑139 (MQ=255) gAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGtt < 5:201205/138‑1 (MQ=255) cGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTACGTTGAGGCTGTA‑T‑AAGGGA‑ACCCCGGTTTTTTCGTCAAATTAAAAGCCTAATTCGTCTCCAGCCAGGGCGTCACCGCGGCCGCCCTGTTAAGGGcc > 6:156354/1‑139 (MQ=255) aCATTTTTAAGCATTTCTGGAGTCGGTTTTTTAGTTTTTGCGTTTAGGCGGTA‑T‑ACGGGAGACCCCGG‑TTTTTAGTAAAATTAAGAGCCTAAATAGTCGCCACCCGGGGCGTCACCCCGGCCGCCGGGTTGAGGGcag > 4:369724/1‑136 (MQ=255) aTTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAGGGCCGAAt < 2:211352/139‑1 (MQ=255) ttttAAGCATTTCTGGAGTCGGGGTTTTGGTTTTTGGGGTTAGGGGGTT‑T‑TCGGGG‑AGCCCGGGTTTTTGGTGAATGTTAGGGGCTACTTCGTGTGCCGGCGGGGGGGCCCCGCGGGCGCCGGGGTGAGGGCCGAATa > 4:304892/1‑138 (MQ=255) gCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAGGGCCGAATAAAGCTGt < 6:67986/139‑1 (MQ=255) cTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAGGGCCGAATAAAGCTGTCAGtt < 6:180547/138‑1 (MQ=255) cTGGAGTCGGGTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAGGGCCGAATAAAGCTGTCAGtt < 4:273235/138‑1 (MQ=255) ttttttCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAGGGCCGAATAAAGCTGTCAGTTTGATATCCggg < 3:166803/139‑1 (MQ=255) | TAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGTTTTTTCGTTTTTCCGTAGAGGCTGTA‑T‑ACGGGA‑ACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAGGGCCGAATAAAGCTGTCAGTTTGATATCCGGG > CP006881/185933‑186204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |