| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 260,580 | A→G | 6.4% | S299P (TCA→CCA) | U712_01220 ← | putative amino acid permease YbgF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 260,580 | 0 | A | G | 6.4% | 226.0 / 3.6 | 77 | S299P (TCA→CCA) | U712_01220 | putative amino acid permease YbgF |
| Reads supporting (aligned to +/- strand): ref base A (36/36); new base G (3/2); total (39/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
ACGTATACAGTGTCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGCGTATGGTACACCGACTCTGTCAAAGACAGCGACAAACGGG > CP006881/260444‑260713 | aCGTATTCAGTGTCTTGCGAAAATACGAGGGACAGCAACTACATAAAGCAGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTTCAAATGTCGGATGAAGCGTTTTTTCTTTTtata < 2:260878/139‑1 (MQ=255) taCAGTGTCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGAc > 2:67171/1‑139 (MQ=255) taCAGTGTCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGAc > 2:68049/1‑139 (MQ=255) taCAGTGTCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTATTTTGATAAAGAc > 6:235431/1‑139 (MQ=255) taCAGTGTCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTAGTTTGAAAAAGAc > 1:134256/1‑139 (MQ=255) aCAGTGTCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGAc > 4:46497/1‑138 (MQ=255) aCAGTGTCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGAc > 4:10615/1‑138 (MQ=255) cAGTGTCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCTTTTTTTCTTTTGATAAAGACca < 8:189162/139‑1 (MQ=255) gtgtCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACcaca > 1:175225/1‑139 (MQ=255) gtgtCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACcaca > 5:214807/1‑139 (MQ=255) gtgtCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACca > 8:361628/1‑137 (MQ=255) gtgtCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACca > 6:19080/1‑137 (MQ=255) gtgtCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACca < 5:19080/137‑1 (MQ=255) tgtCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTATTTTGATAAAGACcaacg > 6:227438/1‑136 (MQ=255) gtCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTGTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTGTTTTGATAAAGCCCACAg > 5:234802/1‑138 (MQ=255) tCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGCCGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTGTTTTTGTAAAGACCACAg > 1:168587/1‑137 (MQ=255) tCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGCAGCGTTTTTTCTTTTGATAAAGACCACAGc > 3:266219/1‑138 (MQ=255) tCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGGTAAAGACCACAGCa > 6:362023/1‑139 (MQ=255) tCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAATACCACAGc > 5:254908/1‑138 (MQ=255) tCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGCCCACAg > 5:216931/1‑137 (MQ=255) tCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACcacatc > 5:31886/1‑136 (MQ=255) tCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCa > 6:167019/1‑139 (MQ=255) tCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCa > 7:247657/1‑139 (MQ=255) tCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCa > 7:25521/1‑139 (MQ=255) tCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTATTTTGATAAAGACCACAGCa > 3:217009/1‑139 (MQ=255) tCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCAGATCATGCTGAACACCAGCGCGTTAAAAGGGCTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCa > 5:82862/1‑139 (MQ=255) cgggCGCAAAACCCCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGACGCGTTTTTTCTTTTGATAAAGACCACAGCAt < 2:147376/137‑1 (MQ=255) gcAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCggg < 8:247657/139‑1 (MQ=255) aaaaACGCTGGCCAGCAACGACCGATTGCCGCCGATCATGCTGAACACCAGCTCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGGGTTTTTTCTTTTGAAAAAGACCACAGCATCCGGgaa < 3:228610/139‑1 (MQ=255) aaaTACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTGTTTTCTTTTGATAAAGGCCACAACATCCGGgaa > 4:228610/1‑139 (MQ=255) aTACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGGTAAAGACCACAGCATCCGGgaag > 3:138051/1‑138 (MQ=255) aTACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTAGGATGAAGCGTTTTTTCTATTGATAAAGACCACAGCAGCCGGgaag > 4:356720/1‑138 (MQ=255) cTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCg > 4:315951/1‑138 (MQ=255) cTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCg > 4:361468/1‑138 (MQ=255) aCAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTa > 3:252107/1‑127 (MQ=255) aCAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTa < 4:252107/127‑1 (MQ=255) aCAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAAt > 2:231910/1‑138 (MQ=255) ccgATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACa < 6:254908/139‑1 (MQ=255) aaCACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGGTAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGt < 4:138051/137‑1 (MQ=255) gcgcGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATaa > 4:101870/1‑138 (MQ=255) cgcgTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGTATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACa < 3:315951/139‑1 (MQ=255) cgcgTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACa < 7:361628/139‑1 (MQ=255) cgcgTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACa < 3:46497/139‑1 (MQ=255) cgcgTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACa < 3:361468/139‑1 (MQ=255) aaaGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGTATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTc < 1:337757/138‑1 (MQ=255) aaaGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTc < 8:25521/138‑1 (MQ=255) gTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCggg > 6:331971/1‑73 (MQ=255) gTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCggg < 5:331971/73‑1 (MQ=255) gTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGAt < 3:328451/110‑1 (MQ=255) gTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGAt > 4:328451/1‑110 (MQ=255) gTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACa < 7:289472/126‑1 (MQ=255) gTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACa > 8:289472/1‑126 (MQ=255) gTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGata > 4:188646/1‑138 (MQ=255) gTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCAGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGatat > 5:18465/1‑139 (MQ=255) ttCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATc > 3:301215/1‑139 (MQ=255) tCCTTTTGACGTCAGCATTGCAAATGTCGGATGAAGCGTTTTTTCAATTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTAAGGATAACAAAGTTCATGATATCg > 7:58174/1‑139 (MQ=255) cTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCgg < 5:167019/138‑1 (MQ=255) cTTTTGACGTCAGCTTTCCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGTAAGAAGCGTAGAGTCCGGAATTAGCCGCTTACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCgt < 6:82862/138‑2 (MQ=255) ttttACGTCAGTTTTGCAATTGTCTGATGAATCTTTTTTTATTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCt < 6:31886/138‑1 (MQ=255) ttGACGTCAGCTTTGCAATTGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCt < 5:227438/137‑1 (MQ=255) ttGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCt < 5:254787/137‑1 (MQ=255) tGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACa > 6:329892/1‑118 (MQ=255) tGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACa < 5:329892/118‑1 (MQ=255) tGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGc < 1:68049/138‑1 (MQ=255) gACGTCAGCTTTGCAATTGTTGGATGAAGCGTTTTTTCTTTTGATAATGACCACAGCATCCGGGAAGTAGCGTAGAGTCCGGAATTTGCCGCTGACAGGATCGGTGTCAGGATAACAAAGTTCTTGATATCGGCTgag < 8:58174/138‑3 (MQ=255) aCGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGCGTa < 4:301215/139‑1 (MQ=255) cGTCAGCTTTGCAAATGTGGGATGAAGCGTTTTTTCTTTTGAAAACGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGCGTAt < 6:216931/139‑1 (MQ=255) cGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGCGTAt < 1:231910/139‑1 (MQ=255) cGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGCGTAt < 3:101870/139‑1 (MQ=255) cGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGCGTAt < 6:214807/139‑1 (MQ=255) gTCAGTTTTGCAAATGTGGGATGAAGAGTTTTTTATTATTATAAAGACCACAGCATCGGGGAAGAAGCGTAGAGTCAGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGCGTAt < 2:134256/138‑1 (MQ=255) tCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGGTAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGCGTATgg < 5:362023/139‑1 (MQ=255) cAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGGCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGCGTATGGTACACCGa < 5:301428/138‑1 (MQ=255) cAAATGTCGGATGAAGCGGTTTTTGTTTTGAAAAAGACCACAGCATCCGGGAAGACGCGTAGAGTCCGGAATTAGCCGCGGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGCGTATGGTACACCGAc < 5:8523/139‑1 (MQ=255) aaTGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGCGTATGGTACACCGActc < 7:291682/139‑1 (MQ=255) gggTTTTATCTTTTCAAAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGCGTATGGTACACCGACTCTGTCAAAGACAGc < 5:235431/137‑1 (MQ=255) attttGATACAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGCGTATGGTACACCGACTCTGTCAAAGACAGCGACAAACg < 6:234802/137‑1 (MQ=255) tttCATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGCGTATGGTACACCGACTCTGTCAAAGACAGCGACAAACggg < 4:217009/138‑1 (MQ=255) | ACGTATACAGTGTCTGGCGCAAATACGCTGGACAGCAACGACAGAATGCCGCCGATCATGCTGAACACCAGCGCGTTAAAAGGGGTTCCTTTTGACGTCAGCTTTGCAAATGTCGGATGAAGCGTTTTTTCTTTTGATAAAGACCACAGCATCCGGGAAGAAGCGTAGAGTCCGGAATTAGCCGCTGACAGGATCGCTGTCAGGATAACAAAGTTCATGATATCGGCTGCGTATGGTACACCGACTCTGTCAAAGACAGCGACAAACGGG > CP006881/260444‑260713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |