| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,653,809 | C→A | 48.6% | intergenic (‑209/‑104) | U712_18820 ← / → U712_18825 | putative beta‑barrel protein ywiB/Subtilosin‑A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,653,809 | 0 | C | A | 48.6% | 13.9 / 106.6 | 80 | intergenic (‑209/‑104) | U712_18820/U712_18825 | putative beta‑barrel protein ywiB/Subtilosin‑A |
| Reads supporting (aligned to +/- strand): ref base C (22/19); new base A (20/19); total (42/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.68e-01 | |||||||||||
ACCATCATTGCTCATCAGATTTGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTATGAAAAAAGCTGTCATTGTAGAAAACAAAG > CP006881/3653682‑3653943 | aCCATCATTGCTCATCAGATTTGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACAttttttt < 3:20823/138‑1 (MQ=255)aCCATCATTGCTCATCAGATTTGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACAttttttt < 4:144605/138‑1 (MQ=255)aCCATCATTGCTCATCAGATTTGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACAttttttt < 2:160427/138‑1 (MQ=255) ccATCATTGCTCATCAGATTTGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCa < 6:276415/139‑1 (MQ=255) catcatTGCTCATCAGATTTGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCaa < 6:329043/139‑1 (MQ=255) tcatTGCTCATCAGATTTGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCaaaa < 4:305905/139‑1 (MQ=255) tcatTGCTCATCAGATTTGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCaaaa > 4:27020/1‑139 (MQ=255) atTGCTCATCAGATTTGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAActa > 4:224273/1‑139 (MQ=255) atTGCTCATCAGATTTGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAata > 8:279795/1‑139 (MQ=255) ttGCTCATCAGATTTGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGGAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAatat < 8:305233/139‑1 (MQ=255) ttGCTCATCAGATTAGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAatat < 4:99895/139‑1 (MQ=255) caGATTTGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCATTTTCACATTTTTTTCAAAATATATGTAtt > 5:280690/1‑138 (MQ=255) aTTTGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAAt > 5:300917/1‑139 (MQ=255) tGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCaa > 7:360644/1‑120 (MQ=255) tGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCaa < 8:360644/120‑1 (MQ=255) aaCCTCATAAAAATCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTACGAAATGTTTCATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGa < 1:242565/139‑1 (MQ=255) aaCCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGa < 1:150192/139‑1 (MQ=255) tCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGt > 4:215807/1‑139 (MQ=255) cATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGtt > 5:277586/1‑139 (MQ=255) tAAAAAGCATTTCCTTTTATAGAAGAGAAAATCATATCAGTAATTACGTTTATGAAATGTTACATTTTTCGGAAATATTTCATTTCCTTTTCACATTTTTTTAAAAATATATTTATTGATTTATAAATTTGATTGttt > 8:161156/1‑138 (MQ=255) aGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGAt < 1:14484/139‑1 (MQ=255) aGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGAt < 6:277586/139‑1 (MQ=255) gCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCTTTTACTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATTGTTTTAAGAt > 8:187919/1‑138 (MQ=255) cATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATaa < 8:116135/139‑1 (MQ=255) tttCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATaa > 8:72495/1‑137 (MQ=255) tttCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATaa > 8:282803/1‑137 (MQ=255) tttCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATGGAATTAGTATTTTGATAGTTTTAAGATaaat > 4:199156/1‑138 (MQ=255) tttACTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATaa < 7:72495/137‑1 (MQ=255) tCCTTATATAGTAGATAAAATCCTATCCCTAAATACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGACTTAGTAATTTGATAGTTTTAAGATAAAAg < 4:273955/138‑1 (MQ=255) cTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTa < 4:152249/138‑1 (MQ=255) cTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTa < 7:279795/138‑1 (MQ=255) cTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTa < 3:283647/138‑1 (MQ=255) cTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTa < 3:27020/138‑1 (MQ=255) cagagAAAATCATATCACTTATTACCTTTAGGATATGTTACATTTTTACGAATTCTATCATTTCCTTTTAACATTTTTTTCAAAATATTTGTATTCAATTAGTAATTTGATAGTTTTAAGATAAAAGTacaaca > 8:127308/2‑134 (MQ=255) aagaGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACTGTTTTTTCAAAATAAATGTATTGATTTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGAt > 3:53663/1‑139 (MQ=255) aagaGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATaaaa > 8:239403/1‑126 (MQ=255) aagaGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATaaaa < 7:239403/126‑1 (MQ=255) aagaGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTacaaca > 7:244325/1‑134 (MQ=255) aagaGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTaaaaca > 2:285894/1‑134 (MQ=255) aagaGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTa < 4:362946/129‑1 (MQ=255) aagaGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTa > 3:362946/1‑129 (MQ=255) aagaGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTacaaca > 8:114341/1‑134 (MQ=255) aagaGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTacaaca > 2:339201/1‑134 (MQ=255) aagaGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTacaaca > 2:158887/1‑134 (MQ=255) aagaGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTATTTTCAAAATATATGTATTGAATTATTAATTTGATAGTTTTAAGATAAAAGAACAACATAGa > 8:148795/1‑138 (MQ=255) agagAAAATCATATCACTAATTACATTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGAt > 6:264624/1‑138 (MQ=255) gagaAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCt > 8:230105/1‑139 (MQ=255) aaaaTCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGc > 8:225732/1‑138 (MQ=255) aaTCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGc > 5:273348/1‑136 (MQ=255) atatCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGaaa < 6:94873/138‑1 (MQ=255) atCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTacaac < 3:304964/120‑1 (MQ=255) atCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTacaac > 4:304964/1‑120 (MQ=255) atCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTa > 5:290200/1‑116 (MQ=255) atCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTa < 6:290200/116‑1 (MQ=255) cACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACa > 1:39258/1‑138 (MQ=255) aTTACCTTTAGGAATTGTTACATTTTTACGAATTCTATCATTTCCTTTTAACAATTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGAGCTGATAGAAAAACaaaaa > 6:61522/1‑137 (MQ=255) aCCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAgg > 1:275734/1‑138 (MQ=255) tAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGAt > 2:185391/1‑139 (MQ=255) tAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGAt > 1:3870/1‑139 (MQ=255) tAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGAt > 2:50987/1‑139 (MQ=255) tAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGAt > 2:221819/1‑139 (MQ=255) aTGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAAtt < 3:346435/139‑1 (MQ=255) tGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTa > 7:327271/1‑139 (MQ=255) tGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTa > 2:236057/1‑139 (MQ=255) tGTTACATTTTTCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTa > 4:139958/1‑139 (MQ=255) tttttCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTATGaaaaa < 3:278551/139‑1 (MQ=255) tttttCCGAAATCTATCATTTCCTTTTAACATTTTTTTCAAAATATATCTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATATATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTATGaaaaa < 7:127308/139‑1 (MQ=255) tCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTATGAAAAAAGc < 3:262225/138‑1 (MQ=255) aaaTCTATCATTTCCTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTATGAAAAAAGCTGTCa < 7:230105/139‑1 (MQ=255) tATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTATGAAAAAAGCTGTCATTGTa < 1:185391/139‑1 (MQ=255) tCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTATGAAAAAAGCTGTCATTGTAg < 3:133355/138‑1 (MQ=255) tCAATTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTATGAAAAAAGCTGTCATTGTa < 3:261356/137‑1 (MQ=255) aTTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTATGAAAAAAGCTGTCATTGTAGaa < 1:236057/138‑1 (MQ=255) tCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTATGAAAAAAGCTGTCATTGTAGAAAAc < 7:204563/138‑1 (MQ=255) ccTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTAt < 6:8449/112‑1 (MQ=255) ccTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTAt > 5:8449/1‑112 (MQ=255) ccTTTTAACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTATGAAAAAAGCTGTCATTGTAGAAAACa < 7:218268/138‑1 (MQ=255) cTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTATGAAAAAAGCTGTCATTGTAGAAAACaa < 4:199040/138‑1 (MQ=255) ttttCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTATGAAAAAAGCTGTCATTGTAGAAAACAAAg > 7:70692/1‑139 (MQ=255) ttttCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTATGAAAAAAGCTGTCATTGTAGAAAACAAAg > 1:148207/1‑139 (MQ=255) | ACCATCATTGCTCATCAGATTTGAAGATAAACCTCATAAAAAGCATTTCCTTATATAGAAGAGAAAATCATATCACTAATTACCTTTAGGAAATGTTACATTTTTCCGAAATCTATCATTTCCTTTTCACATTTTTTTCAAAATATATGTATTGAATTAGTAATTTGATAGTTTTAAGATAAAAGTACAACATAGATCTGCTAGAAAAACAAAAAAAGGGAGGATTCAATTATGAAAAAAGCTGTCATTGTAGAAAACAAAG > CP006881/3653682‑3653943 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |