New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4034082	101 (0.600)	8 (0.000) +G	8/248	25.1	0.80%	intergenic (+86/+184)	rrfA/mobB	5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B
	?	KX077536	33 =	1900 (0.240)					intergenic (–/‑1066)	–/unknown	–/BLA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/4034036‑4034082 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAATGGCTTACGAACGGGGCGGAGATTTCCTGGAAGATGCC  >  KX077536/33‑154                                                |                                                                                                                           CGTTCTATCTGTTGTTTGGCGGTGTACGCTCTCCTGAGTAGGACAAAGCTGCCGCACTAAACCTACGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAG                                              <  1:2212966/126‑1   TTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAGAGCCGCCGCCCTATACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTTGGTCGTTCGACTGCGGCGAGCG                                            <  2:468310/126‑1       ATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAAGCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAA                                        <  2:3288974/126‑1        TCTGTTGTTTGTCGGTGTACGCTCTCCTGAGTAGGANAAAGCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCGACGCTCGGTCGTTCGACTGCGGCAAGCGGAAAT                                       <  2:2661121/126‑1              tTTTGTCGGTGAACGCACTCCGGAGTAGGACAAAGCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCCCTCACTGCCTCGCTACGCTCGGTCGCTCGACGGCGGCGAGCGGAAATGGCTTA                                 <  2:4507/125‑1                                    GAGTAGGACAAAGCAGCCGCCCTAGACCTAGGGATATATCCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAATGGCTTACGAACGGGGCGGAGATTTCCTG           >  2:1098268/1‑126                                        AGGACAAAGCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAATGGCTTACGAACGGGGCGGAGATTTCCTGGAAG       <  1:2735375/126‑1                                             AAAGCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAATGGCTTACGAACGGGGCGGAGATTTCCTGGAAGATGCC  <  2:1962592/126‑1                                                |                                                                                                                           CGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/4034036‑4034082 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAATGGCTTACGAACGGGGCGGAGATTTCCTGGAAGATGCC  >  KX077536/33‑154

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.