New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 416177052 (0.310)14 (0.000)
+G		 14/248 21.2 1.4% intergenic (+86/‑215) rrfB/murB 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding
?KX077536 33 = 1900 (0.240)intergenic (–/‑1066) –/unknown –/BLA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/4161684‑4161770
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAATGGCTTACGAACGGGGCGGAGATTTCCTGGAAGATGCC  >  KX077536/33‑154
                                                                                       |                                                                                                                          
TCAAATAAAACGAAAGGCTCAGTCGAAAGTCTGGTCCTTTCGTTTTATCTGTTGGTTGTCGGTGAACGCTCTCCTGAGTAGGACAAAGCCGCCGCCCTAGACCTAGTGATATATTCCGCTTCCTCG                                                                                      <  2:1284986/126‑1
   AATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAAGCCGCNGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTC                                                                                   <  1:2767469/126‑1
                GCTCAGTCGAAAGACTGGGCCTTTCGCTTTATCTGTTGCTTGTCGGAGAACGCTCTCCTGAGTACGACAAAGCCGCCGCCCTAGACCTAGGGATATATTCCCCTTCCTCCCTCACTGACTCGCTAC                                                                      <  1:3134901/126‑1
                 CTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAAGCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACG                                                                     <  2:1710107/126‑1
                  TCATTCGAAAGACTGGGCCTTTCGATTTGCCTGATATTTGTGGATGAATGGTCTCCAGAGTAGGACAAAGCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGC                                                                    >  2:2873091/1‑126
                    AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAAGCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTC                                                                  >  2:2273665/1‑126
                                        CGTTCTATCTGTTGTTTGGCGGTGTACGCTCTCCTGAGTAGGACAAAGCTGCCGCACTAAACCTACGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAG                                              <  1:2212966/126‑1
                                          TTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAGAGCCGCCGCCCTATACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTTGGTCGTTCGACTGCGGCGAGCG                                            <  2:468310/126‑1
                                              ATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAAGCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAA                                        <  2:3288974/126‑1
                                               TCTGTTGTTTGTCGGTGTACGCTCTCCTGAGTAGGANAAAGCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCGACGCTCGGTCGTTCGACTGCGGCAAGCGGAAAT                                       <  2:2661121/126‑1
                                                     tTTTGTCGGTGAACGCACTCCGGAGTAGGACAAAGCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCCCTCACTGCCTCGCTACGCTCGGTCGCTCGACGGCGGCGAGCGGAAATGGCTTA                                 <  2:4507/125‑1
                                                                           GAGTAGGACAAAGCAGCCGCCCTAGACCTAGGGATATATCCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAATGGCTTACGAACGGGGCGGAGATTTCCTG           >  2:1098268/1‑126
                                                                               AGGACAAAGCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAATGGCTTACGAACGGGGCGGAGATTTCCTGGAAG       <  1:2735375/126‑1
                                                                                    AAAGCCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAATGGCTTACGAACGGGGCGGAGATTTCCTGGAAGATGCC  <  2:1962592/126‑1
                                                                                       |                                                                                                                          
TCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/4161684‑4161770
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGCCGCCCTAGACCTAGGGATATATTCCGCTTCCTCGCTCACTGACTCGCTACGCTCGGTCGTTCGACTGCGGCGAGCGGAAATGGCTTACGAACGGGGCGGAGATTTCCTGGAAGATGCC  >  KX077536/33‑154

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.