| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009273 | 2,400,028 | Δ9 bp | coding (85‑93/939 nt) | lrhA ← | transcriptional repressor of flagellar, motility and chemotaxis genes |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009273 | 2400028 | 2400036 | 9 | 217 [0] | [0] 218 | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2400027 | 0 (0.000) | 198 (1.260) | 127/234 | 0.0 | 100% | coding (94/939 nt) | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes |
| ? | CP009273 | 2400037 = | 0 (0.000) | coding (84/939 nt) | lrhA | transcriptional repressor of flagellar, motility and chemotaxis genes | |||||
Only 100 of 218 total aligned reads displayed.
GTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGC > CP009273/2399913‑2400162 | gaatgccatgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcaa > 1:117658‑M2/125‑126 (MQ=255) catgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAgtgt > 1:255751‑M2/119‑126 (MQ=255) catgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccacacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAgtgt < 1:2158464‑M2/8‑1 (MQ=255) atgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGtt < 2:232397‑M2/9‑1 (MQ=255) atgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGtt < 2:2949902‑M2/9‑1 (MQ=255) atgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGtt < 2:699073‑M2/9‑1 (MQ=255) tgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcgcaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTATTc > 1:2645140‑M2/117‑126 (MQ=255) gttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCa > 2:921280‑M2/116‑126 (MQ=255) tcagttaacagtttgttgcgaccgcgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGa > 1:2622046‑M2/114‑126 (MQ=255) cagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGAt < 1:1731667‑M2/14‑1 (MQ=255) cagttaacagtttgttgcgaccgtgacgagcgaacagttctctcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGAt < 2:2087663‑M2/14‑1 (MQ=255) agttaacagtttgttgcgaccgtgacgagcgaacagttctttcgcaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATc < 2:1638198‑M2/15‑1 (MQ=255) agttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATc < 1:1365577‑M2/15‑1 (MQ=255) agttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATc < 1:2913185‑M2/15‑1 (MQ=255) gttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCg > 2:354664‑M2/111‑126 (MQ=255) aacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgca > 1:1420602‑M2/108‑126 (MQ=255) aacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgca > 1:278149‑M2/108‑126 (MQ=255) cagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaac < 2:1734271‑M2/21‑1 (MQ=255) cagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaac < 1:1375136‑M2/21‑1 (MQ=255) agtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaaca > 2:1147072‑M2/105‑126 (MQ=255) agtttgttgcaaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaaca > 2:397385‑M2/105‑126 (MQ=255) gtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacag < 2:1834726‑M2/23‑1 (MQ=255) tttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagc < 1:1443065‑M2/24‑1 (MQ=255) ttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagca < 2:677791‑M2/25‑1 (MQ=255) tgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagcaa > 2:3111013‑M2/101‑126 (MQ=255) gttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagcaac < 2:2109200‑M2/27‑1 (MQ=255) ttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagcaaca < 2:790720‑M2/28‑1 (MQ=255) tgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGcaacaa > 2:3179793‑M2/98‑126 (MQ=255) gcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACaaa < 2:488075‑M2/30‑1 (MQ=255) ccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGtt < 2:725895‑M2/34‑1 (MQ=255) cgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTtc > 1:3143792‑M2/92‑126 (MQ=255) gtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTtct < 1:1488313‑M2/36‑1 (MQ=255) acgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTcag > 2:28072‑M2/88‑126 (MQ=255) gagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAACGTGTTCAGATCGGCAACAGCAACAAATGTTCTcagca > 2:1429962‑M2/86‑126 (MQ=255) gagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTcagca < 1:201830‑M2/41‑1 (MQ=255) agcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTcagcag < 2:614235‑M2/42‑1 (MQ=255) agcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTcagcag < 1:323945‑M2/42‑1 (MQ=255) cgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAt < 2:2282707‑M2/44‑1 (MQ=255) aacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcg > 1:1968711‑M2/81‑126 (MQ=255) aacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcg < 2:2717709‑M2/46‑1 (MQ=255) aacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcg > 1:2966384‑M2/81‑126 (MQ=255) aacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcg < 1:631500‑M2/46‑1 (MQ=255) acagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcga < 1:937149‑M2/47‑1 (MQ=255) cagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgag < 2:255751‑M2/48‑1 (MQ=255) cagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgag < 1:2042233‑M2/48‑1 (MQ=255) cagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgag < 1:2081864‑M2/48‑1 (MQ=255) agttctttnccaacgagttgttccagacgccgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgagg > 1:2700539‑M2/78‑126 (MQ=255) ttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtc < 1:1077913‑M2/51‑1 (MQ=255) tttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtcgag > 2:560330‑M2/73‑126 (MQ=255) caacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgag > 1:604097‑M2/68‑115 (MQ=255) caacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTaa > 1:1778797‑M2/68‑126 (MQ=255) caacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTaa > 1:2035199‑M2/68‑126 (MQ=255) cgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTa > 2:197339‑M2/65‑126 (MQ=255) gttgttccagacgctgcatttgctgacttacggcggactgactacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCg < 2:2641343‑M2/65‑1 (MQ=255) ttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCgg < 1:194874‑M2/66‑1 (MQ=255) ccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGAt < 2:73997‑M2/71‑1 (MQ=255) cagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGAtt < 1:2810218‑M2/72‑1 (MQ=255) agacgctgcatttgctgacttacggcggactgagttcgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGAttt > 1:760921‑M2/54‑126 (MQ=255) gacgctgcatttgctgacttacggcggactgagtacgacacacagcggccgcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTg < 1:2199616‑M2/74‑1 (MQ=255) gacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTg > 1:2552283‑M2/53‑126 (MQ=255) acgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGc > 1:1628202‑M2/52‑126 (MQ=255) gctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCAc > 1:970679‑M2/50‑126 (MQ=255) ctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACt < 1:2881043‑M2/78‑1 (MQ=255) ctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACt < 2:192441‑M2/78‑1 (MQ=255) gcattcgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTa > 2:2647956‑M2/47‑126 (MQ=255) tttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCa < 1:3295701‑M2/83‑1 (MQ=255) tttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCa < 1:554739‑M2/83‑1 (MQ=255) tgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCata < 1:3355021‑M2/85‑1 (MQ=255) tgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCata > 2:1168488‑M2/42‑126 (MQ=255) gacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATAtatt < 2:1407895‑M2/89‑1 (MQ=255) gacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATAtatt < 2:2751379‑M2/89‑1 (MQ=255) acttacggcggactgagtacgacacacaccggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACTATTTGCACTTATCATAtatta < 2:5171‑M2/90‑1 (MQ=255) cttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGAGCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATAtattat < 2:1340976‑M2/91‑1 (MQ=255) tacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCa < 2:3308856‑M2/93‑1 (MQ=255) gcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTa > 2:1000817‑M2/30‑126 (MQ=255) ggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACt > 2:2120975‑M2/28‑126 (MQ=255) ggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACt > 1:1158871‑M2/28‑126 (MQ=255) ctgagtacgacacacagcggcagcAAAAGCGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTggc < 2:28483‑M2/102‑1 (MQ=255) tgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTggcg < 1:1147072‑M2/103‑1 (MQ=255) gtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCt < 2:1229504‑M2/106‑1 (MQ=255) cgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCAt > 1:732358‑M2/18‑126 (MQ=255) acacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATAc > 1:472819‑M2/16‑126 (MQ=255) acacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTg > 2:1612236‑M2/14‑126 (MQ=255) acacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTg > 2:3217562‑M2/14‑126 (MQ=255) acagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAg > 2:943168‑M2/12‑126 (MQ=255) agcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCt < 2:1048597‑M2/117‑1 (MQ=255) cggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTgg > 1:785461‑M2/8‑126 (MQ=255) cggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTgg < 1:351483‑M2/119‑1 (MQ=255) gcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGtt < 2:2957728‑M2/121‑1 (MQ=255) gcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGtt < 1:1260069‑M2/121‑1 (MQ=255) cagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGATTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTa < 2:2479097‑M2/122‑1 (MQ=255) agcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTaa > 2:1552204‑M2/4‑126 (MQ=255) agcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTaa > 1:408985‑M2/4‑126 (MQ=255) agcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTAAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTaa > 1:2176400‑M2/4‑126 (MQ=255) gcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTTATTATCGGACGATTTGCACTTATCATATATTACCACTTACTGGCGGCTCATACTGAGCTGGTTAAt > 2:2799449‑M2/3‑126 (MQ=255) gcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAAt < 1:3345114‑M2/124‑1 (MQ=255) cAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATg < 1:2353410‑M2/125‑1 (MQ=255) cAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATg < 1:1128174‑M2/125‑1 (MQ=255) aaaaGTGTTCAGATCGGCAATAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGc > 2:2206789/1‑126 (MQ=255) aaaaGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGc < 2:203949/126‑1 (MQ=255) | GTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGC > CP009273/2399913‑2400162 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |