BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP009273	2,400,028	Δ9 bp	coding (85‑93/939 nt)	lrhA ←	transcriptional repressor of flagellar, motility and chemotaxis genes

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009273	2400028	2400036	9	217 [0]	[0] 218	lrhA	transcriptional repressor of flagellar, motility and chemotaxis genes

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 2400027	0 (0.000)	198 (1.260)	127/234	0.0	100%	coding (94/939 nt)	lrhA	transcriptional repressor of flagellar, motility and chemotaxis genes
*	?	CP009273	2400037 =	0 (0.000)	198 (1.260)	127/234	0.0	100%	coding (84/939 nt)	lrhA	transcriptional repressor of flagellar, motility and chemotaxis genes

Only 100 of 218 total aligned reads displayed.

GTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGC  >  CP009273/2399913‑2400162

gaatgccatgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcaa                                                                                                                              >  1:117658‑M2/125‑126 (MQ=255)

      catgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAgtgt                                                                                                                        >  1:255751‑M2/119‑126 (MQ=255)

      catgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccacacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAgtgt                                                                                                                        <  1:2158464‑M2/8‑1 (MQ=255)

       atgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGtt                                                                                                                       <  2:232397‑M2/9‑1 (MQ=255)

       atgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGtt                                                                                                                       <  2:2949902‑M2/9‑1 (MQ=255)

       atgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGtt                                                                                                                       <  2:699073‑M2/9‑1 (MQ=255)

        tgttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcgcaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTATTc                                                                                                                      >  1:2645140‑M2/117‑126 (MQ=255)

         gttcagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCa                                                                                                                     >  2:921280‑M2/116‑126 (MQ=255)

           tcagttaacagtttgttgcgaccgcgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGa                                                                                                                   >  1:2622046‑M2/114‑126 (MQ=255)

            cagttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGAt                                                                                                                  <  1:1731667‑M2/14‑1 (MQ=255)

            cagttaacagtttgttgcgaccgtgacgagcgaacagttctctcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGAt                                                                                                                  <  2:2087663‑M2/14‑1 (MQ=255)

             agttaacagtttgttgcgaccgtgacgagcgaacagttctttcgcaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATc                                                                                                                 <  2:1638198‑M2/15‑1 (MQ=255)

             agttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATc                                                                                                                 <  1:1365577‑M2/15‑1 (MQ=255)

             agttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATc                                                                                                                 <  1:2913185‑M2/15‑1 (MQ=255)

              gttaacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCg                                                                                                                >  2:354664‑M2/111‑126 (MQ=255)

                 aacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgca                                                                                                             >  1:1420602‑M2/108‑126 (MQ=255)

                 aacagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgca                                                                                                             >  1:278149‑M2/108‑126 (MQ=255)

                   cagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaac                                                                                                           <  2:1734271‑M2/21‑1 (MQ=255)

                   cagtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaac                                                                                                           <  1:1375136‑M2/21‑1 (MQ=255)

                    agtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaaca                                                                                                          >  2:1147072‑M2/105‑126 (MQ=255)

                    agtttgttgcaaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaaca                                                                                                          >  2:397385‑M2/105‑126 (MQ=255)

                     gtttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacag                                                                                                         <  2:1834726‑M2/23‑1 (MQ=255)

                      tttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagc                                                                                                        <  1:1443065‑M2/24‑1 (MQ=255)

                       ttgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagca                                                                                                       <  2:677791‑M2/25‑1 (MQ=255)

                        tgttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagcaa                                                                                                      >  2:3111013‑M2/101‑126 (MQ=255)

                         gttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagcaac                                                                                                     <  2:2109200‑M2/27‑1 (MQ=255)

                          ttgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGgcaacagcaaca                                                                                                    <  2:790720‑M2/28‑1 (MQ=255)

                           tgcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGcaacaa                                                                                                   >  2:3179793‑M2/98‑126 (MQ=255)

                            gcgaccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACaaa                                                                                                  <  2:488075‑M2/30‑1 (MQ=255)

                                ccgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGtt                                                                                              <  2:725895‑M2/34‑1 (MQ=255)

                                 cgtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTtc                                                                                             >  1:3143792‑M2/92‑126 (MQ=255)

                                  gtgacgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTtct                                                                                            <  1:1488313‑M2/36‑1 (MQ=255)

                                     acgagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTcag                                                                                         >  2:28072‑M2/88‑126 (MQ=255)

                                       gagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAACGTGTTCAGATCGGCAACAGCAACAAATGTTCTcagca                                                                                       >  2:1429962‑M2/86‑126 (MQ=255)

                                       gagcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTcagca                                                                                       <  1:201830‑M2/41‑1 (MQ=255)

                                        agcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTcagcag                                                                                      <  2:614235‑M2/42‑1 (MQ=255)

                                        agcgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTcagcag                                                                                      <  1:323945‑M2/42‑1 (MQ=255)

                                          cgaacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAt                                                                                    <  2:2282707‑M2/44‑1 (MQ=255)

                                            aacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcg                                                                                  >  1:1968711‑M2/81‑126 (MQ=255)

                                            aacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcg                                                                                  <  2:2717709‑M2/46‑1 (MQ=255)

                                            aacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcg                                                                                  >  1:2966384‑M2/81‑126 (MQ=255)

                                            aacagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcg                                                                                  <  1:631500‑M2/46‑1 (MQ=255)

                                             acagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcga                                                                                 <  1:937149‑M2/47‑1 (MQ=255)

                                              cagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgag                                                                                <  2:255751‑M2/48‑1 (MQ=255)

                                              cagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgag                                                                                <  1:2042233‑M2/48‑1 (MQ=255)

                                              cagttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgag                                                                                <  1:2081864‑M2/48‑1 (MQ=255)

                                               agttctttnccaacgagttgttccagacgccgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgagg                                                                               >  1:2700539‑M2/78‑126 (MQ=255)

                                                 ttctttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtc                                                                             <  1:1077913‑M2/51‑1 (MQ=255)

                                                    tttcccaacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgaggtcgag                                                                          >  2:560330‑M2/73‑126 (MQ=255)

                                                         caacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGAtcgag                                                                                >  1:604097‑M2/68‑115 (MQ=255)

                                                         caacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTaa                                                                     >  1:1778797‑M2/68‑126 (MQ=255)

                                                         caacgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTaa                                                                     >  1:2035199‑M2/68‑126 (MQ=255)

                                                            cgagttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTa                                                                  >  2:197339‑M2/65‑126 (MQ=255)

                                                               gttgttccagacgctgcatttgctgacttacggcggactgactacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCg                                                               <  2:2641343‑M2/65‑1 (MQ=255)

                                                                ttgttccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCgg                                                              <  1:194874‑M2/66‑1 (MQ=255)

                                                                     ccagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGAt                                                         <  2:73997‑M2/71‑1 (MQ=255)

                                                                      cagacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGAtt                                                        <  1:2810218‑M2/72‑1 (MQ=255)

                                                                       agacgctgcatttgctgacttacggcggactgagttcgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGAttt                                                       >  1:760921‑M2/54‑126 (MQ=255)

                                                                        gacgctgcatttgctgacttacggcggactgagtacgacacacagcggccgcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTg                                                      <  1:2199616‑M2/74‑1 (MQ=255)

                                                                        gacgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTg                                                      >  1:2552283‑M2/53‑126 (MQ=255)

                                                                         acgctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGc                                                     >  1:1628202‑M2/52‑126 (MQ=255)

                                                                           gctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCAc                                                   >  1:970679‑M2/50‑126 (MQ=255)

                                                                            ctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACt                                                  <  1:2881043‑M2/78‑1 (MQ=255)

                                                                            ctgcatttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACt                                                  <  2:192441‑M2/78‑1 (MQ=255)

                                                                              gcattcgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTa                                                >  2:2647956‑M2/47‑126 (MQ=255)

                                                                                 tttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCa                                             <  1:3295701‑M2/83‑1 (MQ=255)

                                                                                 tttgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCa                                             <  1:554739‑M2/83‑1 (MQ=255)

                                                                                   tgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCata                                           <  1:3355021‑M2/85‑1 (MQ=255)

                                                                                   tgctgacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCata                                           >  2:1168488‑M2/42‑126 (MQ=255)

                                                                                       gacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATAtatt                                       <  2:1407895‑M2/89‑1 (MQ=255)

                                                                                       gacttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATAtatt                                       <  2:2751379‑M2/89‑1 (MQ=255)

                                                                                        acttacggcggactgagtacgacacacaccggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACTATTTGCACTTATCATAtatta                                      <  2:5171‑M2/90‑1 (MQ=255)

                                                                                         cttacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGAGCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATAtattat                                     <  2:1340976‑M2/91‑1 (MQ=255)

                                                                                           tacggcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCa                                   <  2:3308856‑M2/93‑1 (MQ=255)

                                                                                               gcggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTa                               >  2:1000817‑M2/30‑126 (MQ=255)

                                                                                                 ggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACt                             >  2:2120975‑M2/28‑126 (MQ=255)

                                                                                                 ggactgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACt                             >  1:1158871‑M2/28‑126 (MQ=255)

                                                                                                    ctgagtacgacacacagcggcagcAAAAGCGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTggc                          <  2:28483‑M2/102‑1 (MQ=255)

                                                                                                     tgagtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTggcg                         <  1:1147072‑M2/103‑1 (MQ=255)

                                                                                                        gtacgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCt                      <  2:1229504‑M2/106‑1 (MQ=255)

                                                                                                           cgacacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCAt                   >  1:732358‑M2/18‑126 (MQ=255)

                                                                                                             acacacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATAc                 >  1:472819‑M2/16‑126 (MQ=255)

                                                                                                               acacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTg               >  2:1612236‑M2/14‑126 (MQ=255)

                                                                                                               acacagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTg               >  2:3217562‑M2/14‑126 (MQ=255)

                                                                                                                 acagcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAg             >  2:943168‑M2/12‑126 (MQ=255)

                                                                                                                   agcggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCt           <  2:1048597‑M2/117‑1 (MQ=255)

                                                                                                                     cggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTgg         >  1:785461‑M2/8‑126 (MQ=255)

                                                                                                                     cggcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTgg         <  1:351483‑M2/119‑1 (MQ=255)

                                                                                                                       gcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGtt       <  2:2957728‑M2/121‑1 (MQ=255)

                                                                                                                       gcagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGtt       <  1:1260069‑M2/121‑1 (MQ=255)

                                                                                                                        cagcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGATTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTa      <  2:2479097‑M2/122‑1 (MQ=255)

                                                                                                                         agcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTaa     >  2:1552204‑M2/4‑126 (MQ=255)

                                                                                                                         agcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTaa     >  1:408985‑M2/4‑126 (MQ=255)

                                                                                                                         agcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTAAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTaa     >  1:2176400‑M2/4‑126 (MQ=255)

                                                                                                                          gcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTTATTATCGGACGATTTGCACTTATCATATATTACCACTTACTGGCGGCTCATACTGAGCTGGTTAAt    >  2:2799449‑M2/3‑126 (MQ=255)

                                                                                                                          gcAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAAt    <  1:3345114‑M2/124‑1 (MQ=255)

                                                                                                                           cAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATg   <  1:2353410‑M2/125‑1 (MQ=255)

                                                                                                                           cAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATg   <  1:1128174‑M2/125‑1 (MQ=255)

                                                                                                                            aaaaGTGTTCAGATCGGCAATAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGc  >  2:2206789/1‑126 (MQ=255)

                                                                                                                            aaaaGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGc  <  2:203949/126‑1 (MQ=255)

GTTCAGTTAACAGTTTGTTGCGACCGTGACGAGCGAACAGTTCTTTCCCAACGAGTTGTTCCAGACGCTGCATTTGCTGACTTACGGCGGACTGAGTACGACACACAGCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGC  >  CP009273/2399913‑2400162

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`