Tue Dec  8 14:56:50 2020

/usr/bin/breseq-0.35.4-Linux-x86_64/bin/breseq -j 1 --consensus-frequency-cutoff=0.75 --require-match-fraction=0.95 -o breseq_processes/0 -r /var/data/NC_000913.3.gb -r /var/data/BN000925.1.gb /var/alemutpipe-outputs/good/ERR1957960_R1.good.fq.gz /var/alemutpipe-outputs/good/ERR1957960_R2.good.fq.gz