Thu Jun 16 22:47:20 2022

/usr/bin/breseq-0.35.4-Linux-x86_64/bin/breseq -p -j 2 --consensus-frequency-cutoff=0.75 --require-match-fraction=0.95 -o breseq_processes/0 -r /var/data/BW25113.gb /var/alemutpipe-outputs/good/PAL228_S226_L001_R1_001.good.fq.gz /var/alemutpipe-outputs/good/PAL228_S226_L001_R2_001.good.fq.gz