breseq  version 0.33.2  revision caddc01d3be9 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	1,706	G→C	5.4%	L39V (CTC→GTC)	parA ←	chromosome partition protein
RA	1,707	G→C	5.9%	D38E (GAC→GAG)	parA ←	chromosome partition protein
RA	4,977	C→T	6.5%	intergenic (‑596/+35)	trmF ← / ← trmE	tRNA uridine 5‑carboxymethylaminomethyl modification protein/GTPase
RA	4,980	A→G	6.7%	intergenic (‑599/+32)	trmF ← / ← trmE	tRNA uridine 5‑carboxymethylaminomethyl modification protein/GTPase
RA	6,332	C→A	6.2%	R17R (CGG→CGT)	trmE ←	GTPase
RA	6,339	T→A	7.5%	Q15L (CAG→CTG)	trmE ←	GTPase
RA	6,429	Δ1 bp	6.5%	intergenic (‑47/+42)	trmE ← / ← oxaA	GTPase/membrane protein insertase
RA	6,433:1	+T	6.8%	intergenic (‑51/+38)	trmE ← / ← oxaA	GTPase/membrane protein insertase
RA	27,581	C→T	10.0%	intergenic (‑428/+18)	PP_0022 ← / ← PP_0023	hypothetical protein/hypothetical protein
RA	27,584	A→G	10.6%	intergenic (‑431/+15)	PP_0022 ← / ← PP_0023	hypothetical protein/hypothetical protein
RA	39,490	C→A	8.1%	V73V (GTC→GTA)	PP_0036 →	transcriptional regulator
RA	39,491	T→G	8.2%	Y74D (TAC→GAC)	PP_0036 →	transcriptional regulator
RA	45,680	C→G	9.5%	intergenic (‑156/+47)	cadA‑I ← / ← PP_0042	cadmium translocating P‑type ATPase/hypothetical protein
RA	58,731	A→G	10.9%	intergenic (‑642/+46)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,747	T→A	18.5%	intergenic (‑658/+30)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,750	T→A	18.3%	intergenic (‑661/+27)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,766	C→T	8.5%	intergenic (‑677/+11)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	68,340	G→T	9.4%	intergenic (+28/+147)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,342	A→T	9.6%	intergenic (+30/+145)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,344	A→C	9.6%	intergenic (+32/+143)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,591	T→C	8.5%	I228V (ATT→GTT)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,598	T→G	14.9%	P225P (CCA→CCC)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,603	C→A	15.5%	G224W (GGG→TGG)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	74,066	G→A	5.0%	R181H (CGT→CAT)	PP_0063 →	lipid A biosynthesis lauroyl acyltransferase
RA	74,377	A→T	6.1%	K285* (AAG→TAG) ‡	PP_0063 →	lipid A biosynthesis lauroyl acyltransferase
RA	74,378	A→T	6.1%	K285M (AAG→ATG) ‡	PP_0063 →	lipid A biosynthesis lauroyl acyltransferase
RA	77,500	A→T	9.0%	L15H (CTC→CAC)	rsmB ←	ribosomal RNA small subunit methyltransferase B
RA	77,503	A→T	9.1%	V14E (GTG→GAG)	rsmB ←	ribosomal RNA small subunit methyltransferase B
RA	87,493	T→A	13.8%	N98I (AAT→ATT)	PP_0076 ←	choline betaine‑binding protein
RA	87,956	G→C	7.1%	R454R (CGC→CGG)	betC ←	choline‑sulfatase
RA	87,959	G→C	7.0%	R453R (CGC→CGG)	betC ←	choline‑sulfatase
RA	94,007	G→A	8.0%	G102S (GGC→AGC)	trpI →	HTH‑type transcriptional regulator TrpI
RA	95,664	G→A	6.9%	intergenic (+56/+16)	PP_0087 → / ← PP_0088	hypothetical protein/alkanal monooxygenase
RA	104,876	G→C	12.2%	P345P (CCG→CCC)	PP_0099 →	hypothetical protein
RA	124,515	T→A	8.8%	N40I (AAT→ATT)	znuC ←	zinc ABC transporter ATP‑binding protein
RA	126,115	A→G	11.5%	intergenic (+25/+25)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	126,116	C→T	11.1%	intergenic (+26/+24)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	132,463	G→A	9.7%	intergenic (+37/‑115)	cc → / → dsbA	cytochrome c4/thiol:disulfide interchange protein
RA	132,467	G→C	9.4%	intergenic (+41/‑111)	cc → / → dsbA	cytochrome c4/thiol:disulfide interchange protein
RA	141,785	A→G	5.1%	L21P (CTG→CCG)	algB ←	alginate biosynthesis transcriptional regulator AlgB
RA	160,310	C→T	5.9%	E27K (GAG→AAG)	PP_0149 ←	hypothetical protein
RA	160,311	A→G	6.0%	L26L (CTT→CTC)	PP_0149 ←	hypothetical protein
RA	162,281	A→T	9.0%	intergenic (‑315/+59)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	162,282	A→T	8.5%	intergenic (‑316/+58)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	165,929	G→T	10.9%	A326A (GCC→GCA)	pntAA ←	pyridine nucleotide transhydrogenase subunit alpha
RA	165,932	A→C	11.1%	D325E (GAT→GAG)	pntAA ←	pyridine nucleotide transhydrogenase subunit alpha
RA	182,034	G→A	7.2%	intergenic (+23/+42)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,035	A→T	6.2%	intergenic (+24/+41)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036	T→C	6.5%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036:1	+C	5.3%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	191,912	Δ1 bp	7.2%	coding (1606/2157 nt)	paxB ←	toxin secretion ATP‑binding protein
RA	191,916:1	+G	7.5%	coding (1602/2157 nt)	paxB ←	toxin secretion ATP‑binding protein
RA	195,559	C→A	29.3%	T355T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	195,628	C→T	6.7%	D378D (GAC→GAT)	PP_0168 →	putative surface adhesion protein
RA	195,629	A→G	6.6%	T379A (ACC→GCC)	PP_0168 →	putative surface adhesion protein
RA	195,634	C→T	40.2%	T380T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	196,306	T→C	29.1%	N604N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	196,327	A→C	34.2%	T611T (ACA→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,351	C→G	33.3%	T619T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	196,390	T→C	34.0%	D632D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,089	T→C	10.9%	N865N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	197,551	C→G	11.1%	T1019T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	197,572	G→A	19.0%	K1026K (AAG→AAA)	PP_0168 →	putative surface adhesion protein
RA	197,590	T→C	20.8%	D1032D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,632	T→C	12.0%	T1046T (ACT→ACC)	PP_0168 →	putative surface adhesion protein
RA	197,695	G→C	13.2%	T1067T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	198,367	G→C	8.5%	V1291V (GTG→GTC)	PP_0168 →	putative surface adhesion protein
RA	198,777	T→A	6.7%	L1428Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	199,681	G→C	7.4%	V1729V (GTG→GTC)	PP_0168 →	putative surface adhesion protein
RA	202,062	T→A	16.4%	L2523Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	206,064	T→A	7.8%	L3857Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	211,621	G→C	9.9%	V5709V (GTG→GTC)	PP_0168 →	putative surface adhesion protein
RA	212,034	T→A	16.7%	L5847Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	212,043	C→G	12.1%	T5850S (ACC→AGC)	PP_0168 →	putative surface adhesion protein
RA	213,220	G→C	9.1%	V6242V (GTG→GTC)	PP_0168 →	putative surface adhesion protein
RA	213,354	T→A	13.0%	L6287Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	220,561	A→T	7.1%	intergenic (+18/‑110)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	220,562	C→G	7.0%	intergenic (+19/‑109)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	220,563	A→T	7.0%	intergenic (+20/‑108)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	243,508	T→A	9.1%	*221C (TGA→TGT) ‡	fkl ←	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	243,510	A→T	9.3%	*221R (TGA→AGA) ‡	fkl ←	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	243,512	T→A	8.7%	D220V (GAC→GTC)	fkl ←	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	268,744	T→A	8.2%	intergenic (‑75/+25)	PP_0216 ← / ← desA	sensory box/GGDEF family protein/delta‑9 fatty acid desaturase
RA	268,746	G→C	9.5%	intergenic (‑77/+23)	PP_0216 ← / ← desA	sensory box/GGDEF family protein/delta‑9 fatty acid desaturase
RA	269,747	G→C	7.8%	A69A (GCC→GCG)	desA ←	delta‑9 fatty acid desaturase
RA	269,750	G→C	7.8%	T68T (ACC→ACG)	desA ←	delta‑9 fatty acid desaturase
RA	282,320	C→T	5.8%	intergenic (+39/‑231)	PP_0228 → / → betT‑II	serine acetyltransferase/choline/carnitine/betaine transporter
RA	282,321	A→T	10.1%	intergenic (+40/‑230)	PP_0228 → / → betT‑II	serine acetyltransferase/choline/carnitine/betaine transporter
RA	282,327	G→T	6.2%	intergenic (+46/‑224)	PP_0228 → / → betT‑II	serine acetyltransferase/choline/carnitine/betaine transporter
RA	282,329	T→C	7.6%	intergenic (+48/‑222)	PP_0228 → / → betT‑II	serine acetyltransferase/choline/carnitine/betaine transporter
RA	284,587	T→A	22.1%	intergenic (+33/+30)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,588	T→A	22.1%	intergenic (+34/+29)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,604:1	+G	8.1%	intergenic (+50/+13)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	292,607	C→G	6.6%	intergenic (+22/‑38)	ssuA → / → ssuD	aliphatic sulfonatesABC transporter substrate‑binding protein/alkanesulfonate monooxygenase
RA	294,515	A→C	5.6%	I238L (ATT→CTT)	ssuC →	aliphatic sulfonatesABC transporter permease
RA	295,976	G→T	5.9%	P151Q (CCG→CAG)	PP_0242 ←	TetR family transcriptional regulator
RA	295,979	A→C	6.2%	L150R (CTG→CGG)	PP_0242 ←	TetR family transcriptional regulator
RA	308,740	C→T	14.8%	intergenic (+1754/‑116)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	308,741	A→G	14.5%	intergenic (+1755/‑115)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	321,742	T→C	13.6%	intergenic (+27/+431)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	321,743	G→A	13.6%	intergenic (+28/+430)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,135	G→A	24.7%	intergenic (+420/+38)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,142	T→C	22.0%	intergenic (+427/+31)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	325,161	C→G	7.8%	P149A (CCA→GCA)	oprQ →	outer‑membrane porin D
RA	326,067	C→A	12.3%	*556Y (TAG→TAT)	PP_0269 ←	glutamate synthase large subunit
RA	326,070	T→G	11.9%	A555A (GCA→GCC)	PP_0269 ←	glutamate synthase large subunit
RA	337,828	G→T	13.2%	intergenic (‑75/+54)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	338,068	G→T	6.6%	A168A (GCC→GCA)	PP_0280 ←	amino acid ABC transporter permease
RA	338,071	A→C	6.8%	S167R (AGT→AGG)	PP_0280 ←	amino acid ABC transporter permease
RA	343,610	T→A	8.4%	intergenic (‑163/‑77)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	343,611	G→C	8.2%	intergenic (‑164/‑76)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	343,612	T→A	8.2%	intergenic (‑165/‑75)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	344,044	Δ1 bp	8.5%	intergenic (+130/+59)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,048:1	+T	8.2%	intergenic (+134/+55)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,665	T→A	6.4%	E314V (GAG→GTG)	mutY ←	A/G‑specific adenine glycosylase
RA	344,668	C→T	6.3%	G313D (GGC→GAC)	mutY ←	A/G‑specific adenine glycosylase
RA	344,674	G→C	6.4%	P311R (CCG→CGG)	mutY ←	A/G‑specific adenine glycosylase
RA	350,953	G→T	6.9%	L121L (CTG→CTT)	hisH →	imidazole glycerol phosphate synthase subunit HisH
RA	350,954	A→C	7.2%	K122Q (AAG→CAG)	hisH →	imidazole glycerol phosphate synthase subunit HisH
RA	367,365	C→A	7.7%	intergenic (‑48/+26)	PP_5442 ← / ← PP_0306	hypothetical protein/hypothetical protein
RA	367,370	T→G	7.3%	intergenic (‑53/+21)	PP_5442 ← / ← PP_0306	hypothetical protein/hypothetical protein
RA	381,859	T→A	11.8%	D230V (GAC→GTC)	PP_0317 ←	methyl‑accepting chemotaxis transducer
RA	384,786	C→G	6.2%	R421G (CGC→GGC)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	384,790	A→T	6.0%	N422I (AAT→ATT)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	384,794	C→G	6.2%	A423A (GCC→GCG)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	390,091	G→T	9.0%	S121I (AGC→ATC)	soxA →	sarcosine oxidase subunit alpha
RA	390,096	A→C	9.6%	M123L (ATG→CTG)	soxA →	sarcosine oxidase subunit alpha
RA	390,996	G→T	9.2%	G423C (GGT→TGT)	soxA →	sarcosine oxidase subunit alpha
RA	390,999	T→A	9.0%	Y424N (TAC→AAC)	soxA →	sarcosine oxidase subunit alpha
RA	391,002	A→C	8.8%	S425R (AGC→CGC)	soxA →	sarcosine oxidase subunit alpha
RA	395,849	Δ1 bp	11.1%	intergenic (+28/+176)	fdhA → / ← PP_0329	formaldehyde dehydrogenase/hypothetical protein
RA	395,851:1	+G	10.8%	intergenic (+30/+174)	fdhA → / ← PP_0329	formaldehyde dehydrogenase/hypothetical protein
RA	401,927	A→G	6.7%	V201A (GTC→GCC)	PP_0335 ←	glutathione S‑transferase family protein
RA	401,938	C→T	6.9%	R197R (CGG→CGA)	PP_0335 ←	glutathione S‑transferase family protein
RA	428,785	G→A	7.2%	S75S (AGC→AGT)	PP_0351 ←	transmembrane sensor
RA	429,115	C→G	6.9%	G137A (GGC→GCC)	PP_0352 ←	ECF family RNA polymerase sigma‑70 factor
RA	432,996	A→T	8.9%	intergenic (+18/+29)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	432,997	A→T	10.4%	intergenic (+19/+28)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	432,998	A→T	8.9%	intergenic (+20/+27)	PP_0355 → / ← glcB	two‑component system response regulator/malate synthase G
RA	438,270	C→T	7.2%	L31L (CTG→CTA) ‡	rdoA ←	serine/threonine protein kinase
RA	438,271	A→G	5.7%	L31P (CTG→CCG) ‡	rdoA ←	serine/threonine protein kinase
RA	441,740	G→T	7.9%	L206L (CTG→CTT)	bioF →	8‑amino‑7‑oxononanoate synthase
RA	444,595	T→A	5.8%	intergenic (+74/‑100)	bioD → / → PP_0367	dethiobiotin synthetase/hypothetical protein
RA	444,596	T→A	6.0%	intergenic (+75/‑99)	bioD → / → PP_0367	dethiobiotin synthetase/hypothetical protein
RA	459,913	A→G	5.8%	intergenic (‑56/+23)	pqqB ← / ← pqqA	coenzyme PQQ synthesis protein B/coenzyme PQQ synthesis protein A
RA	461,026	C→A	5.5%	R481L (CGG→CTG)	pqqF ←	coenzyme PQQ synthesis protein F
RA	461,033	C→G	7.6%	V479L (GTG→CTG)	pqqF ←	coenzyme PQQ synthesis protein F
RA	461,040	T→G	9.1%	P476P (CCA→CCC)	pqqF ←	coenzyme PQQ synthesis protein F
RA	473,705	T→C	13.7%	Q428R (CAG→CGG)	dnaG ←	DNA primase
RA	473,708	T→A	12.3%	Q427L (CAG→CTG)	dnaG ←	DNA primase
RA	473,711	G→A	12.3%	P426L (CCG→CTG)	dnaG ←	DNA primase
RA	476,700	A→C	6.8%	Q330P (CAG→CCG) ‡	tsaD →	tRNA N6‑adenosine(37)‑threonylcarbamoyltransferase complex transferase subunit TsaD
RA	476,701	G→T	6.8%	Q330H (CAG→CAT) ‡	tsaD →	tRNA N6‑adenosine(37)‑threonylcarbamoyltransferase complex transferase subunit TsaD
RA	482,090	G→A	7.5%	Q92* (CAA→TAA)	PP_0396 ←	hypothetical protein
RA	497,699	T→C	8.8%	L523P (CTG→CCG) ‡	PP_0409 →	two‑component system sensor histidine kinase
RA	497,700	G→T	8.0%	L523L (CTG→CTT) ‡	PP_0409 →	two‑component system sensor histidine kinase
RA	497,706	Δ1 bp	9.7%	coding (1575/2388 nt)	PP_0409 →	two‑component system sensor histidine kinase
RA	497,713	G→T	7.9%	D528Y (GAC→TAC) ‡	PP_0409 →	two‑component system sensor histidine kinase
RA	497,714	A→C	8.1%	D528A (GAC→GCC) ‡	PP_0409 →	two‑component system sensor histidine kinase
RA	503,595	T→C	11.3%	F208S (TTT→TCT) ‡	PP_0414 →	polyamine ABC transporter permease
RA	503,596	T→A	11.3%	F208L (TTT→TTA) ‡	PP_0414 →	polyamine ABC transporter permease
RA	503,597	G→A	10.9%	D209N (GAC→AAC)	PP_0414 →	polyamine ABC transporter permease
RA	516,282	A→T	5.6%	L238Q (CTG→CAG)	PP_0429 ←	short‑chain dehydrogenase/reductase family oxidoreductase
RA	516,285	A→T	5.7%	L237Q (CTG→CAG)	PP_0429 ←	short‑chain dehydrogenase/reductase family oxidoreductase
RA	519,340	C→G	7.4%	I242M (ATC→ATG)	argC →	N‑acetyl‑gamma‑glutamyl‑phosphate reductase
RA	519,341	C→G	7.4%	H243D (CAT→GAT)	argC →	N‑acetyl‑gamma‑glutamyl‑phosphate reductase
RA	524,352	G→C	16.9%	intergenic (+216/‑600)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,355	G→C	17.0%	intergenic (+219/‑597)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,368	C→T	20.9%	intergenic (+232/‑584)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	535,821	G→T	7.4%	E85* (GAA→TAA) ‡	rplA →	50S ribosomal protein L1
RA	535,822	A→C	7.6%	E85A (GAA→GCA) ‡	rplA →	50S ribosomal protein L1
RA	537,582	C→G	12.2%	intergenic (+109/‑44)	PP_mr07 → / → rpoB	P26 ncRNA/DNA‑directed RNA polymerase subunit beta
RA	541,440	A→G	10.9%	Q1272R (CAG→CGG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	541,443	C→T	10.3%	P1273L (CCG→CTG)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	543,730	A→G	8.5%	N656S (AAC→AGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,733	C→T	8.4%	A657V (GCT→GTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	546,005	G→A	8.6%	intergenic (+42/‑31)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,010	G→T	7.3%	intergenic (+47/‑26)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,011	A→T	7.6%	intergenic (+48/‑25)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,012	A→C	7.9%	intergenic (+49/‑24)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,017	T→C	7.7%	intergenic (+54/‑19)	rpoC → / → PP_mr08	DNA‑directed RNA polymerase subunit beta'/rpsL_psuedo ncRNA
RA	546,102	G→A	6.8%	noncoding (67/138 nt)	PP_mr08 →	rpsL_psuedo ncRNA
RA	550,552	C→G	13.8%	intergenic (+30/‑112)	tufB → / → rpsJ	elongation factor Tu‑B/30S ribosomal protein S10
RA	556,085	G→C	6.8%	D7H (GAC→CAC)	rplX →	50S ribosomal protein L24
RA	557,335	Δ1 bp	8.2%	intergenic (+75/‑134)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	557,339:1	+A	8.4%	intergenic (+79/‑130)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	562,663	C→A	6.7%	T129N (ACT→AAT)	rpsD →	30S ribosomal protein S4
RA	571,620	G→A	14.1%	intergenic (+43/+48)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	571,621	T→C	14.7%	intergenic (+44/+47)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	584,844	A→T	6.7%	L139M (TTG→ATG)	ansA ←	type 1 L‑asparaginase
RA	591,706	C→G	14.3%	intergenic (+17/+14)	PP_0501 → / ← PP_0502	NAD‑dependent epimerase/dehydratase family protein/hypothetical protein
RA	592,816	G→C	7.6%	G184A (GGC→GCC)	PP_0503 →	MFS transporter
RA	596,127	G→C	8.5%	S10R (AGC→AGG)	PP_0506 ←	ABC transporter permease
RA	603,439	G→T	5.3%	A314A (GCG→GCT)	ribAB‑I →	bifunctional 3,4‑dihydroxy‑2‑butanone 4‑phosphate synthase/GTP cyclohydrolase II
RA	612,749	G→A	8.1%	A479V (GCT→GTT)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase
RA	612,755	G→C	8.6%	P477R (CCG→CGG)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase
RA	612,761	T→C	8.6%	N475S (AAC→AGC)	dxs ←	1‑deoxyxylulose‑5‑phosphate synthase
RA	626,559	T→G	8.0%	K213Q (AAG→CAG)	dedA ←	inner membrane protein
RA	626,572	C→A	9.7%	L208L (CTG→CTT)	dedA ←	inner membrane protein
RA	638,745	A→T	11.7%	L16Q (CTG→CAG)	PP_0550 ←	hypothetical protein
RA	651,427	T→A	7.0%	K414* (AAG→TAG)	dsbD‑I ←	thiol/disulfide interchange protein 1
RA	655,063	G→A	8.3%	A428V (GCC→GTC)	PP_0563 ←	two‑component system response regulator
RA	655,070	T→C	6.9%	T426A (ACC→GCC)	PP_0563 ←	two‑component system response regulator
RA	664,889	C→T	15.4%	A584A (GCC→GCT)	yfhM →	lipoprotein
RA	664,890	A→G	15.7%	S585G (AGC→GGC)	yfhM →	lipoprotein
RA	668,266	G→T	8.6%	F87L (TTC→TTA) ‡	PP_0571 ←	membrane protein
RA	668,267	A→C	8.6%	F87C (TTC→TGC) ‡	PP_0571 ←	membrane protein
RA	683,826	T→C	7.1%	S10G (AGC→GGC)	PP_0585 ←	MerR family metal‑sensitive transcriptional regulator
RA	691,898	T→C	12.0%	E156G (GAA→GGA)	yigZ ←	ribosome‑binding factor
RA	697,206	T→C	10.7%	intergenic (+130/‑621)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,217	T→C	9.2%	intergenic (+141/‑610)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,228	C→G	8.2%	intergenic (+152/‑599)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,231	C→G	8.2%	intergenic (+155/‑596)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	699,725	A→G	47.7%	intergenic (+115/‑129)	PP_t06 → / → PP_23SD	tRNA‑Ala/23S ribosomal RNA
RA	702,766:1	+G	6.8%	intergenic (+11/‑121)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,769	Δ1 bp	6.8%	intergenic (+14/‑118)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	741,501	G→T	7.5%	intergenic (+98/‑402)	PP_t12 → / → PP_0635	tRNA‑Thr/group II intron‑encoding maturase
RA	741,504	A→C	7.5%	intergenic (+101/‑399)	PP_t12 → / → PP_0635	tRNA‑Thr/group II intron‑encoding maturase
RA	780,559	A→C	7.9%	intergenic (‑86/+36)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,561	T→A	7.7%	intergenic (‑88/+34)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,563	G→T	8.1%	intergenic (‑90/+32)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	789,075	C→T	9.8%	L104F (CTC→TTC)	gdhA →	NADP‑dependent glutamate dehydrogenase
RA	789,081	G→A	9.5%	V106M (GTG→ATG) ‡	gdhA →	NADP‑dependent glutamate dehydrogenase
RA	789,082	T→C	9.9%	V106A (GTG→GCG) ‡	gdhA →	NADP‑dependent glutamate dehydrogenase
RA	789,088	A→G	9.8%	K108R (AAG→AGG)	gdhA →	NADP‑dependent glutamate dehydrogenase
RA	790,960	T→A	9.8%	Q46L (CAG→CTG)	PP_0677 ←	lipoprotein
RA	795,305	G→C	6.5%	V482L (GTA→CTA)	PP_0680 →	ATP‑dependent protease‑like protein
RA	795,308	G→C	7.0%	A483P (GCG→CCG)	PP_0680 →	ATP‑dependent protease‑like protein
RA	806,330	T→C	9.1%	K335E (AAG→GAG)	PP_0693 ←	hypothetical protein
RA	806,331	G→A	9.1%	L334L (CTC→CTT)	PP_0693 ←	hypothetical protein
RA	838,006	Δ1 bp	9.1%	intergenic (‑39/+41)	pth ← / ← rplY	peptidyl‑tRNA hydrolase/50S ribosomal protein L25/general stress protein Ctc
RA	838,010:1	+C	9.1%	intergenic (‑43/+37)	pth ← / ← rplY	peptidyl‑tRNA hydrolase/50S ribosomal protein L25/general stress protein Ctc
RA	850,994	C→G	6.0%	intergenic (‑574/‑231)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	850,995	C→G	6.0%	intergenic (‑575/‑230)	pcs ← / → hemA	phosphatidylcholine synthase/glutamyl‑tRNA reductase
RA	856,081	G→A	7.4%	A9A (GCG→GCA)	pagL‑I →	lipid A 3‑O‑deacylase
RA	856,084	T→C	7.7%	A10A (GCT→GCC)	pagL‑I →	lipid A 3‑O‑deacylase
RA	863,379	A→T	8.1%	A170A (GCA→GCT)	hemH →	ferrochelatase
RA	863,901	T→A	18.3%	intergenic (+15/+21)	hemH → / ← uraA	ferrochelatase/uracil permease
RA	863,902	T→A	16.8%	intergenic (+16/+20)	hemH → / ← uraA	ferrochelatase/uracil permease
RA	863,903	T→A	17.2%	intergenic (+17/+19)	hemH → / ← uraA	ferrochelatase/uracil permease
RA	865,406	G→T	11.9%	A141A (GCC→GCA)	upp ←	uracil phosphoribosyltransferase
RA	865,409	A→C	11.4%	V140V (GTT→GTG)	upp ←	uracil phosphoribosyltransferase
RA	870,233	G→T	13.2%	R65S (CGC→AGC)	PP_5456 ←	hypothetical protein
RA	870,234	A→C	14.4%	A64A (GCT→GCG)	PP_5456 ←	hypothetical protein
RA	872,089	C→A	5.9%	W359L (TGG→TTG)	PP_0756 ←	hypothetical protein
RA	873,421	G→A	8.2%	G18S (GGC→AGC)	PP_5457 →	hypothetical protein
RA	873,428	T→C	8.9%	L20P (CTT→CCT)	PP_5457 →	hypothetical protein
RA	876,018	G→C	7.7%	noncoding (105/142 nt)	PP_mr65 ←	YybP‑YkoY
RA	876,021	G→C	7.7%	noncoding (102/142 nt)	PP_mr65 ←	YybP‑YkoY
RA	892,892	C→T	9.5%	A276T (GCA→ACA)	pta ←	phosphate acetyltransferase
RA	892,896	G→C	10.4%	S274R (AGC→AGG)	pta ←	phosphate acetyltransferase
RA	892,900	A→G	10.4%	V273A (GTC→GCC)	pta ←	phosphate acetyltransferase
RA	895,201	G→C	6.2%	intergenic (+38/+26)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,204	T→C	6.1%	intergenic (+41/+23)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,210	G→C	6.2%	intergenic (+47/+17)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	906,219	T→C	7.5%	V76A (GTG→GCG)	ampD →	N‑acetyl‑anhydromuramyl‑L‑alanine‑amidase
RA	914,193	T→G	5.4%	Y301D (TAT→GAT)	fruA →	PTS fructose transporter subunit IIBC
RA	914,647:1	+C	5.3%	coding (1355/1743 nt)	fruA →	PTS fructose transporter subunit IIBC
RA	924,322	Δ1 bp	9.8%	coding (874/2169 nt)	PP_0804 ←	protein secretion ABC transporter permease/ATP‑binding protein
RA	924,324:1	+A	9.7%	coding (872/2169 nt)	PP_0804 ←	protein secretion ABC transporter permease/ATP‑binding protein
RA	927,773	A→C	7.1%	L5951R (CTG→CGG) ‡	PP_0806 ←	surface adhesion protein
RA	927,774	G→T	6.9%	L5951M (CTG→ATG) ‡	PP_0806 ←	surface adhesion protein
RA	946,895	G→C	6.2%	T159T (ACC→ACG)	norR ←	DNA‑binding transcriptional regulator
RA	951,487	T→C	6.5%	A105A (GCT→GCC)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	953,232	A→G	5.8%	H13R (CAC→CGC) ‡	cyoC →	cytochrome bo terminal oxidase subunit III
RA	953,233	C→T	5.6%	H13H (CAC→CAT) ‡	cyoC →	cytochrome bo terminal oxidase subunit III
RA	955,079	Δ1 bp	14.3%	intergenic (+30/‑283)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,083	T→A	14.9%	intergenic (+34/‑279)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,085:1	+G	14.9%	intergenic (+36/‑277)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,586	C→G	9.6%	G75G (GGC→GGG)	alaC →	aminotransferase
RA	955,589	C→G	8.0%	I76M (ATC→ATG)	alaC →	aminotransferase
RA	961,583	T→A	7.3%	S279C (AGC→TGC)	selD ←	selenide, water dikinase
RA	966,598	A→T	9.8%	L41* (TTG→TAG) ‡	PP_0828 ←	membrane protein
RA	966,599	A→T	9.7%	L41M (TTG→ATG) ‡	PP_0828 ←	membrane protein
RA	968,878	G→T	15.0%	intergenic (‑308/+23)	PP_0831 ← / ← PP_t68	hypothetical protein/tRNA‑Leu
RA	968,881	A→C	12.9%	intergenic (‑311/+20)	PP_0831 ← / ← PP_t68	hypothetical protein/tRNA‑Leu
RA	970,240	T→G	15.2%	F29C (TTC→TGC) ‡	tgt →	queuine tRNA‑ribosyltransferase
RA	970,241	C→A	13.6%	F29L (TTC→TTA) ‡	tgt →	queuine tRNA‑ribosyltransferase
RA	972,118	T→A	7.9%	L136Q (CTG→CAG)	secD →	protein translocase subunit SecD
RA	972,121	T→A	7.9%	L137Q (CTG→CAG)	secD →	protein translocase subunit SecD
RA	975,173	G→A	7.1%	intergenic (+19/+150)	ycfJ → / ← suhB	flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase
RA	975,290	A→T	9.7%	intergenic (+136/+33)	ycfJ → / ← suhB	flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase
RA	975,291	A→T	10.2%	intergenic (+137/+32)	ycfJ → / ← suhB	flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase
RA	977,876	T→A	5.6%	intergenic (+39/‑141)	cysE → / → iscR	serine acetyltransferase/DNA‑binding transcriptional regulator IscR
RA	986,238	C→G	9.3%	A78G (GCC→GGC)	PP_0852 →	Cro/CI family transcriptional regulator
RA	986,241	C→G	9.3%	A79G (GCC→GGC)	PP_0852 →	Cro/CI family transcriptional regulator
RA	986,248	A→C	7.5%	V81V (GTA→GTC)	PP_0852 →	Cro/CI family transcriptional regulator
RA	987,603	C→G	6.5%	A196G (GCC→GGC)	ispG →	4‑hydroxy‑3‑methylbut‑2‑en‑1‑yl diphosphate synthase (flavodoxin)
RA	991,548	A→T	8.8%	D56V (GAC→GTC)	der →	GTPase Der
RA	991,557	G→A	17.4%	G59D (GGT→GAT)	der →	GTPase Der
RA	991,560	T→C	16.9%	I60T (ATC→ACC)	der →	GTPase Der
RA	991,569	A→T	9.2%	D63V (GAC→GTC)	der →	GTPase Der
RA	1,004,529	A→T	13.9%	Q184L (CAG→CTG)	PP_0866 →	transmembrane sensor
RA	1,011,776	A→T	10.0%	K62M (AAG→ATG)	prfC →	peptide chain release factor 3
RA	1,011,779	A→C	9.4%	Q63P (CAG→CCG)	prfC →	peptide chain release factor 3
RA	1,011,784	G→T	9.6%	G65C (GGC→TGC)	prfC →	peptide chain release factor 3
RA	1,011,787	A→T	9.6%	I66F (ATC→TTC)	prfC →	peptide chain release factor 3
RA	1,013,231	A→T	13.4%	intergenic (+56/+75)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,237	C→A	13.5%	intergenic (+62/+69)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,238	A→T	11.6%	intergenic (+63/+68)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,244	G→C	12.2%	intergenic (+69/+62)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,245	G→C	12.2%	intergenic (+70/+61)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,251	A→T	12.8%	intergenic (+76/+55)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,252	T→G	14.3%	intergenic (+77/+54)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,258	A→T	13.1%	intergenic (+83/+48)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,024,313	G→C	6.4%	S279R (AGC→AGG)	opdP ←	glycine‑glutamate dipeptide porin
RA	1,031,395	G→C	8.9%	S33T (AGC→ACC)	regA →	photosynthetic apparatus regulatory protein RegA
RA	1,034,080	T→C	8.8%	V38V (GTT→GTC)	PP_0892 →	phospholipase family protein
RA	1,034,081	G→A	8.6%	D39N (GAC→AAC)	PP_0892 →	phospholipase family protein
RA	1,043,276	C→A	6.4%	S361R (AGC→AGA)	colS →	integral membrane sensor signal transduction histidine kinase
RA	1,058,260	Δ1 bp	13.2%	intergenic (‑186/+34)	PP_0914 ← / ← sodB	GGDEF domain‑containing protein/superoxide dismutase
RA	1,058,264:1	+T	13.0%	intergenic (‑190/+30)	PP_0914 ← / ← sodB	GGDEF domain‑containing protein/superoxide dismutase
RA	1,068,948	T→A	7.7%	I36N (ATT→AAT)	aroP‑I →	aromatic amino acid transport protein
RA	1,070,236	T→C	6.3%	intergenic (+33/+111)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,241	G→A	12.7%	intergenic (+38/+106)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,242	G→T	12.7%	intergenic (+39/+105)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,265	G→C	23.1%	intergenic (+62/+82)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,268	G→C	23.1%	intergenic (+65/+79)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,438	C→T	6.8%	R318H (CGC→CAC)	PP_0928 ←	K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,076,841	G→C	7.2%	R72P (CGC→CCC)	mreC →	cell shape‑determining protein MreC
RA	1,089,301	A→T	8.5%	K53* (AAG→TAG) ‡	fumC‑I →	class 2 fumarate hydratase
RA	1,089,302	A→T	8.3%	K53M (AAG→ATG) ‡	fumC‑I →	class 2 fumarate hydratase
RA	1,097,043	G→C	6.6%	A150G (GCC→GGC)	PP_0954 ←	hypothetical protein
RA	1,110,374	G→T	7.4%	R132L (CGA→CTA) ‡	PP_0970 →	cyanate MFS transporter
RA	1,110,375	A→T	7.4%	R132R (CGA→CGT) ‡	PP_0970 →	cyanate MFS transporter
RA	1,110,376	A→C	7.4%	S133R (AGT→CGT)	PP_0970 →	cyanate MFS transporter
RA	1,114,354	T→A	13.2%	N153I (AAT→ATT)	rlmF ←	ribosomal RNA large subunit methyltransferase F
RA	1,121,449	C→T	9.3%	V295V (GTC→GTT)	PP_0982 →	YjgP/YjgQ family permease
RA	1,121,450	A→G	9.3%	N296D (AAC→GAC)	PP_0982 →	YjgP/YjgQ family permease
RA	1,121,458	C→A	9.1%	R298R (CGC→CGA)	PP_0982 →	YjgP/YjgQ family permease
RA	1,123,943	T→A	9.6%	intergenic (‑138/+83)	PP_mr13 ← / ← gcvT‑I	cspA regulatory region/aminomethyltransferase
RA	1,123,948	T→A	9.3%	intergenic (‑143/+78)	PP_mr13 ← / ← gcvT‑I	cspA regulatory region/aminomethyltransferase
RA	1,129,437	A→T	12.5%	A40A (GCT→GCA)	gcvP‑I ←	glycine dehydrogenase
RA	1,130,198	A→T	10.4%	intergenic (‑247/+57)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,145,439	C→T	16.7%	intergenic (‑100/+41)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,446	G→A	16.8%	intergenic (‑107/+34)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,447	T→C	16.1%	intergenic (‑108/+33)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,454	A→G	16.4%	intergenic (‑115/+26)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,148,799	G→T	5.8%	T151K (ACG→AAG)	PP_1007 ←	transmembrane sensor
RA	1,148,802	A→C	5.8%	L150R (CTT→CGT)	PP_1007 ←	transmembrane sensor
RA	1,151,972	C→T	7.1%	Q231* (CAG→TAG) ‡	edd →	phosphogluconate dehydratase
RA	1,151,973	A→G	7.1%	Q231R (CAG→CGG) ‡	edd →	phosphogluconate dehydratase
RA	1,152,620	C→T	5.8%	P447S (CCG→TCG)	edd →	phosphogluconate dehydratase
RA	1,183,456	T→C	9.4%	Y312C (TAC→TGC)	mltF ←	membrane‑bound lytic murein transglycosylase F
RA	1,183,462	A→T	8.0%	I310N (ATT→AAT)	mltF ←	membrane‑bound lytic murein transglycosylase F
RA	1,183,468	G→A	8.4%	A308V (GCA→GTA)	mltF ←	membrane‑bound lytic murein transglycosylase F
RA	1,184,591	G→C	26.6%	intergenic (‑201/‑211)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,594	G→C	23.9%	intergenic (‑204/‑208)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,184,611	C→T	11.7%	intergenic (‑221/‑191)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,189,041	A→G	7.3%	intergenic (+25/+17)	PP_1038 → / ← tatC‑I	hypothetical protein/Sec‑independent protein translocase protein
RA	1,189,042	C→T	6.2%	intergenic (+26/+16)	PP_1038 → / ← tatC‑I	hypothetical protein/Sec‑independent protein translocase protein
RA	1,196,274	Δ1 bp	7.7%	coding (329/1755 nt)	xcpQ →	type II secretion pathway protein XcpQ
RA	1,196,279:1	+G	7.8%	coding (334/1755 nt)	xcpQ →	type II secretion pathway protein XcpQ
RA	1,205,646	G→A	10.6%	P41L (CCC→CTC)	PP_1057 ←	PadR family transcriptional regulator
RA	1,205,649	T→A	10.9%	Q40L (CAG→CTG)	PP_1057 ←	PadR family transcriptional regulator
RA	1,205,652	T→C	11.7%	E39G (GAG→GGG)	PP_1057 ←	PadR family transcriptional regulator
RA	1,207,680	G→A	5.5%	L443L (CTG→TTG)	PP_1058 ←	hypothetical protein
RA	1,207,681	T→C	5.6%	Q442Q (CAA→CAG)	PP_1058 ←	hypothetical protein
RA	1,211,277	A→G	9.0%	V399A (GTG→GCG) ‡	PP_1060 ←	glutamate synthase large subunit
RA	1,211,278	C→T	9.1%	V399M (GTG→ATG) ‡	PP_1060 ←	glutamate synthase large subunit
RA	1,218,358	C→T	9.0%	V20M (GTG→ATG)	metR‑I ←	homocysteine‑binding DNA‑binding transcriptional regulator
RA	1,219,155	A→G	6.5%	D229G (GAC→GGC) ‡	PP_1064 →	alpha/beta family hydrolase
RA	1,219,156	C→T	6.7%	D229D (GAC→GAT) ‡	PP_1064 →	alpha/beta family hydrolase
RA	1,226,713	T→A	14.1%	intergenic (‑217/‑114)	gltI ← / → PP_1072	glutamate/aspartate ABC transporter substrate‑binding protein/leucine‑rich repeat‑containing protein
RA	1,226,716	T→A	14.1%	intergenic (‑220/‑111)	gltI ← / → PP_1072	glutamate/aspartate ABC transporter substrate‑binding protein/leucine‑rich repeat‑containing protein
RA	1,229,553	G→C	11.8%	Q909H (CAG→CAC)	PP_1072 →	leucine‑rich repeat‑containing protein
RA	1,241,533	A→G	7.8%	intergenic (+19/‑73)	PP_1080 → / → grxD	molybdopterin‑binding oxidoreductase/monothiol glutaredoxin
RA	1,241,535	G→C	8.2%	intergenic (+21/‑71)	PP_1080 → / → grxD	molybdopterin‑binding oxidoreductase/monothiol glutaredoxin
RA	1,241,537	C→T	8.2%	intergenic (+23/‑69)	PP_1080 → / → grxD	molybdopterin‑binding oxidoreductase/monothiol glutaredoxin
RA	1,244,374	A→G	12.0%	G39G (GGT→GGC) ‡	rnt ←	ribonuclease T
RA	1,244,375	C→G	12.0%	G39A (GGT→GCT) ‡	rnt ←	ribonuclease T
RA	1,244,376	C→T	11.7%	G39S (GGT→AGT) ‡	rnt ←	ribonuclease T
RA	1,245,336	G→C	7.6%	A66A (GCC→GCG)	pyrC ←	dihydroorotase
RA	1,245,340	G→C	7.9%	P65R (CCG→CGG)	pyrC ←	dihydroorotase
RA	1,245,344	G→C	9.2%	R64G (CGC→GGC)	pyrC ←	dihydroorotase
RA	1,249,755	A→T	9.0%	intergenic (+22/+49)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,249,757	C→G	10.2%	intergenic (+24/+47)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,249,759	A→T	9.2%	intergenic (+26/+45)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,261,542:1	+T	8.6%	coding (1099/1116 nt)	PP_1104 ←	AotO‑related protein
RA	1,261,548	T→A	8.3%	S365C (AGC→TGC)	PP_1104 ←	AotO‑related protein
RA	1,261,554	Δ1 bp	6.9%	coding (1087/1116 nt)	PP_1104 ←	AotO‑related protein
RA	1,273,350	A→T	5.3%	intergenic (+135/+33)	PP_1113 → / ← PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
RA	1,275,093	G→C	9.1%	intergenic (‑284/+28)	PP_5462 ← / ← PP_5463	hypothetical protein/hypothetical protein
RA	1,289,852	Δ1 bp	8.9%	coding (1119/2349 nt)	PP_1126 →	hydrolase
RA	1,289,857	A→T	9.3%	N375I (AAT→ATT)	PP_1126 →	hydrolase
RA	1,289,861:1	+A	8.9%	coding (1128/2349 nt)	PP_1126 →	hydrolase
RA	1,308,560	T→A	8.2%	L25Q (CTG→CAG)	PP_1143 →	3‑hydroxyisobutyrate dehydrogenase
RA	1,308,833	T→A	9.5%	L116Q (CTG→CAG)	PP_1143 →	3‑hydroxyisobutyrate dehydrogenase
RA	1,310,124	A→T	12.6%	L472Q (CTG→CAG)	PP_1144 ←	membrane protein
RA	1,310,130	A→T	12.0%	L470Q (CTG→CAG)	PP_1144 ←	membrane protein
RA	1,310,136	A→T	11.8%	L468Q (CTG→CAG)	PP_1144 ←	membrane protein
RA	1,310,449	G→C	9.4%	L364V (CTG→GTG)	PP_1144 ←	membrane protein
RA	1,310,451	T→A	9.4%	D363V (GAC→GTC)	PP_1144 ←	membrane protein
RA	1,310,453	G→C	9.1%	H362Q (CAC→CAG)	PP_1144 ←	membrane protein
RA	1,317,344	G→C	7.7%	Q252H (CAG→CAC)	PP_1150 →	membrane protein
RA	1,327,127	C→T	56.6%	intergenic (+97/‑196)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,354,271	G→T	12.1%	S371Y (TCC→TAC) ‡	nrdA ←	ribonucleoside‑diphosphate reductase subunit alpha
RA	1,354,272	A→C	12.8%	S371A (TCC→GCC) ‡	nrdA ←	ribonucleoside‑diphosphate reductase subunit alpha
RA	1,355,475	Δ1 bp	10.8%	intergenic (‑93/‑1)	nrdA ← / → PP_1180	ribonucleoside‑diphosphate reductase subunit alpha/hypothetical protein
RA	1,355,480:1	+T	11.5%	coding (5/264 nt)	PP_1180 →	hypothetical protein
RA	1,356,411	G→C	12.5%	G94A (GGC→GCC)	PP_1181 →	two‑component system response regulator
RA	1,364,664	A→T	7.5%	intergenic (+28/+121)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,665	A→T	7.5%	intergenic (+29/+120)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,364,666	A→T	7.5%	intergenic (+30/+119)	dctA‑I → / ← PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
RA	1,365,284	G→C	6.6%	A67G (GCC→GGC)	PP_1189 ←	hypothetical protein
RA	1,365,290	T→A	7.0%	H65L (CAC→CTC)	PP_1189 ←	hypothetical protein
RA	1,380,752	C→A	13.7%	intergenic (‑134/+1)	PP_t67 ← / ← PP_t66	tRNA‑Met/tRNA‑Met
RA	1,381,721	G→C	11.3%	D156H (GAC→CAC)	dinB →	DNA polymerase IV
RA	1,382,332	A→T	8.1%	intergenic (+12/+15)	dinB → / ← PP_1204	DNA polymerase IV/lipoprotein
MC JC	1,385,534	Δ69 bp	100%	coding (861‑929/1266 nt)	oprD ←	basic amino acid specific porin OprD
RA	1,403,596	G→A	21.2%	intergenic (‑56/+25)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,403,597	T→C	21.3%	intergenic (‑57/+24)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,404,891	A→T	8.5%	L266Q (CTG→CAG)	PP_1228 ←	methyl‑accepting chemotaxis transducer
RA	1,404,894	A→T	8.5%	L265Q (CTG→CAG)	PP_1228 ←	methyl‑accepting chemotaxis transducer
RA	1,416,940	A→C	8.1%	H61P (CAC→CCC)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,942	G→A	8.1%	V62M (GTG→ATG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,947	T→C	7.8%	H63H (CAT→CAC)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,416,949	G→T	8.0%	G64V (GGG→GTG)	PP_1239 →	metallo‑beta‑lactamase family protein
RA	1,425,657	T→C	7.0%	intergenic (+52/‑453)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,425,662	C→T	7.2%	intergenic (+57/‑448)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,425,663	A→G	7.1%	intergenic (+58/‑447)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,425,668	G→A	6.9%	intergenic (+63/‑442)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,429,581	G→A	7.5%	intergenic (+91/‑389)	mqo‑II → / → PP_1252	malate:quinone oxidoreductase/group II intron‑encoding maturase
RA	1,435,822	A→T	6.2%	L50Q (CTG→CAG)	PP_1256 ←	alpha‑ketoglutarate semialdehyde dehydrogenase
RA	1,435,829	A→T	8.3%	C48S (TGC→AGC)	PP_1256 ←	alpha‑ketoglutarate semialdehyde dehydrogenase
RA	1,443,122	A→T	10.4%	intergenic (‑53/+123)	ghrB ← / ← PP_1262	2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator
RA	1,443,123	A→T	10.4%	intergenic (‑54/+122)	ghrB ← / ← PP_1262	2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator
RA	1,445,792	T→C	8.2%	V470A (GTC→GCC)	PP_1263 →	fusaric acid resistance protein
RA	1,445,797	G→A	7.8%	A472T (GCC→ACC)	PP_1263 →	fusaric acid resistance protein
RA	1,445,801	T→A	9.0%	L473Q (CTG→CAG)	PP_1263 →	fusaric acid resistance protein
RA	1,447,253	G→C	6.4%	M448I (ATG→ATC)	PP_1264 →	fusaric acid resistance protein
RA	1,449,146	T→C	12.4%	*287R (TGA→CGA)	PP_1266 →	fusaric acid resistance protein
RA	1,463,031	A→T	7.9%	intergenic (‑100/+42)	algI ← / ← algL	alginate O‑acetylase AlgI/alginate lyase
RA	1,463,032	A→T	8.3%	intergenic (‑101/+41)	algI ← / ← algL	alginate O‑acetylase AlgI/alginate lyase
RA	1,465,879	T→A	9.2%	K440M (AAG→ATG) ‡	algG ←	poly(beta‑D‑mannuronate) C5 epimerase
RA	1,465,880	T→A	9.4%	K440* (AAG→TAG) ‡	algG ←	poly(beta‑D‑mannuronate) C5 epimerase
RA	1,467,833	T→A	6.1%	Q289L (CAG→CTG)	algE ←	alginate production protein AlgE
RA	1,467,839	T→C	7.4%	D287G (GAC→GGC)	algE ←	alginate production protein AlgE
RA	1,468,175	A→T	6.6%	V175D (GTC→GAC)	algE ←	alginate production protein AlgE
RA	1,471,402	G→T	8.8%	R478R (CGG→AGG)	alg8 ←	glycosyltransferase Alg8
RA	1,471,405	A→C	8.8%	S477A (TCG→GCG)	alg8 ←	glycosyltransferase Alg8
RA	1,475,032	T→C	10.8%	E259G (GAG→GGG)	PP_1289 ←	DUF328 domain‑containing protein
RA	1,488,056	T→A	7.6%	N92Y (AAC→TAC)	degS ←	serine endoprotease DegS
RA	1,488,064	T→A	9.2%	K89M (AAG→ATG) ‡	degS ←	serine endoprotease DegS
RA	1,488,065	T→A	9.4%	K89* (AAG→TAG) ‡	degS ←	serine endoprotease DegS
RA	1,488,073	T→A	8.3%	Y86F (TAC→TTC)	degS ←	serine endoprotease DegS
RA	1,489,374	C→T	13.3%	intergenic (+166/‑37)	ybgI → / → cysD	metal‑binding hydrolase/oxidase/sulfate adenylyltransferase subunit 2
RA	1,489,377	A→G	13.3%	intergenic (+169/‑34)	ybgI → / → cysD	metal‑binding hydrolase/oxidase/sulfate adenylyltransferase subunit 2
RA	1,491,144	G→C	7.4%	S267T (AGT→ACT)	cysNC →	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase
RA	1,506,932	A→G	9.6%	intergenic (+44/‑73)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,939	T→C	8.5%	intergenic (+51/‑66)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,943	C→T	8.3%	intergenic (+55/‑62)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,508,087	G→A	7.8%	intergenic (+17/+45)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,089	A→C	7.8%	intergenic (+19/+43)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,090	T→C	7.8%	intergenic (+20/+42)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,521,288	T→G	10.1%	F168C (TTC→TGC) ‡	murD →	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
RA	1,521,289	C→G	10.1%	F168L (TTC→TTG) ‡	murD →	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
RA	1,521,290	C→A	11.7%	Q169K (CAG→AAG)	murD →	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
RA	1,523,406	T→A	10.0%	L23Q (CTG→CAG)	murG →	UDP‑N‑acetylglucosamine‑‑N‑acetylmuramyl‑ (pentapeptide) pyrophosphoryl‑undecaprenol N‑acetylglucosamine transferase
RA	1,523,411	T→A	11.0%	C25S (TGC→AGC)	murG →	UDP‑N‑acetylglucosamine‑‑N‑acetylmuramyl‑ (pentapeptide) pyrophosphoryl‑undecaprenol N‑acetylglucosamine transferase
RA	1,526,613	G→T	7.2%	C253F (TGC→TTC)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,622	T→A	15.3%	I256N (ATT→AAT)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,631	A→C	9.7%	E259A (GAA→GCA)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,531,396:1	+C	7.2%	coding (522/630 nt)	PP_1344 ←	hypothetical protein
RA	1,531,400	T→G	8.1%	E173A (GAG→GCG)	PP_1344 ←	hypothetical protein
RA	1,538,604	C→G	5.5%	V670L (GTG→CTG)	PP_1350 ←	two‑component system sensor histidine kinase/response regulator
RA	1,538,607	C→G	5.5%	A669P (GCG→CCG)	PP_1350 ←	two‑component system sensor histidine kinase/response regulator
RA	1,538,610	C→G	5.6%	A668P (GCG→CCG)	PP_1350 ←	two‑component system sensor histidine kinase/response regulator
RA	1,538,777	G→C	6.3%	T612S (ACC→AGC)	PP_1350 ←	two‑component system sensor histidine kinase/response regulator
RA	1,543,049	G→T	8.8%	G263W (GGG→TGG)	PP_1353 →	membrane protein
RA	1,547,118	A→G	6.0%	E138G (GAG→GGG)	PP_1357 →	hypothetical protein
RA	1,549,937	A→T	10.4%	I99F (ATC→TTC)	groL →	chaperonin GroEL
RA	1,549,942	C→T	8.7%	V100V (GTC→GTT)	groL →	chaperonin GroEL
RA	1,549,943	A→G	8.2%	N101D (AAC→GAC)	groL →	chaperonin GroEL
RA	1,549,948	A→T	7.8%	E102D (GAA→GAT)	groL →	chaperonin GroEL
RA	1,551,324	G→T	12.2%	intergenic (+41/+85)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,551,327	A→C	13.1%	intergenic (+44/+82)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,563,870	A→C	5.1%	intergenic (+94/+28)	PP_1372 → / ← pitB	hypothetical protein/phosphate transporter
RA	1,564,973	A→T	5.5%	L133Q (CTG→CAG)	pitB ←	phosphate transporter
RA	1,592,024	C→A	21.7%	intergenic (‑89/‑114)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,592,029	T→G	22.9%	intergenic (‑94/‑109)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,592,046	G→C	7.6%	intergenic (‑111/‑92)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,594,103	T→C	8.7%	intergenic (‑259/+42)	PP_1399 ← / ← kgtP	hypothetical protein/alpha‑ketoglutarate permease
RA	1,594,115	G→A	10.6%	intergenic (‑271/+30)	PP_1399 ← / ← kgtP	hypothetical protein/alpha‑ketoglutarate permease
RA	1,594,526	A→C	17.8%	R313R (CGT→CGG)	kgtP ←	alpha‑ketoglutarate permease
RA	1,594,529	G→C	18.1%	R312R (CGC→CGG)	kgtP ←	alpha‑ketoglutarate permease
RA	1,594,532	G→T	18.2%	G311G (GGC→GGA)	kgtP ←	alpha‑ketoglutarate permease
RA	1,606,449	A→T	13.8%	intergenic (‑157/+54)	PP_1407 ← / ← PP_t64	sulfate transporter/tRNA‑Gly
RA	1,606,450	A→T	13.8%	intergenic (‑158/+53)	PP_1407 ← / ← PP_t64	sulfate transporter/tRNA‑Gly
RA	1,623,425	G→A	7.9%	intergenic (‑27/+23)	PP_1422 ← / ← PP_1423	hypothetical protein/hypothetical protein
RA	1,625,249	G→T	5.9%	intergenic (+30/+27)	PP_1425 → / ← nadB	hypothetical protein/L‑aspartate oxidase
RA	1,625,250	A→C	7.7%	intergenic (+31/+26)	PP_1425 → / ← nadB	hypothetical protein/L‑aspartate oxidase
RA	1,632,135	C→T	12.7%	P283S (CCT→TCT) ‡	lepA →	elongation factor 4
RA	1,632,137	T→A	11.7%	P283P (CCT→CCA) ‡	lepA →	elongation factor 4
RA	1,632,139	A→G	11.9%	E284G (GAG→GGG)	lepA →	elongation factor 4
RA	1,637,367	A→T	12.3%	intergenic (+34/+32)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,368	A→T	12.3%	intergenic (+35/+31)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,378	G→A	9.2%	intergenic (+45/+21)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,638,429	A→C	8.1%	F118C (TTT→TGT)	PP_1437 ←	heavy metal sensor histidine kinase
RA	1,639,617	C→T	6.9%	intergenic (‑165/‑146)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,622	G→A	6.7%	intergenic (‑170/‑141)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,623	T→C	7.1%	intergenic (‑171/‑140)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,627	A→C	8.0%	intergenic (‑175/‑136)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,642,306	G→A	7.2%	intergenic (‑92/+60)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,313	G→C	7.9%	intergenic (‑99/+53)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,327	G→C	7.1%	intergenic (‑113/+39)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,334	T→C	8.0%	intergenic (‑120/+32)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,343	G→A	8.6%	intergenic (‑129/+23)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,345	C→T	5.6%	intergenic (‑131/+21)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,648,991	G→A	5.8%	intergenic (‑228/+68)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,648,999	T→A	5.1%	intergenic (‑236/+60)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,649,001	C→G	5.1%	intergenic (‑238/+58)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,649,002	C→G	5.1%	intergenic (‑239/+57)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,649,008	A→G	5.2%	intergenic (‑245/+51)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,649,009	T→G	5.2%	intergenic (‑246/+50)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,649,012	T→C	5.1%	intergenic (‑249/+47)	oprB‑II ← / ← PP_1446	carbohydrate‑selective porin/TonB‑dependent receptor
RA	1,649,531	T→C	7.7%	H524R (CAT→CGT)	PP_1446 ←	TonB‑dependent receptor
RA	1,655,216	G→C	7.2%	T532R (ACG→AGG)	PP_1449 ←	hypothetical protein
RA	1,656,528	C→G	7.0%	A95P (GCC→CCC)	PP_1449 ←	hypothetical protein
RA	1,683,290	C→G	8.2%	intergenic (+57/‑174)	recJ → / → PP_1478	ssDNA‑specific exonuclease RecJ/xenobiotic reductase
RA	1,683,293	C→G	7.8%	intergenic (+60/‑171)	recJ → / → PP_1478	ssDNA‑specific exonuclease RecJ/xenobiotic reductase
RA	1,683,555	A→T	6.1%	D31V (GAT→GTT)	PP_1478 →	xenobiotic reductase
RA	1,683,561	T→A	5.3%	L33Q (CTG→CAG)	PP_1478 →	xenobiotic reductase
RA	1,683,567	A→T	5.3%	N35I (AAC→ATC)	PP_1478 →	xenobiotic reductase
RA	1,691,814	T→C	12.8%	intergenic (+39/‑132)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,815	C→G	13.8%	intergenic (+40/‑131)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,825	C→A	14.7%	intergenic (+50/‑121)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,828	T→G	13.5%	intergenic (+53/‑118)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,838	C→G	10.9%	intergenic (+63/‑108)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,839	G→A	10.8%	intergenic (+64/‑107)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,693,727	C→G	7.6%	P52A (CCT→GCT) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,693,728	C→G	7.3%	P52R (CCT→CGT) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,703,263	T→C	6.3%	intergenic (+70/‑97)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,290	A→G	7.9%	intergenic (+97/‑70)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,292	G→C	8.0%	intergenic (+99/‑68)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294	C→T	7.9%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294:1	+T	14.4%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,321	G→A	6.9%	intergenic (+128/‑39)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,326	A→G	7.1%	intergenic (+133/‑34)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,706,378	Δ1 bp	10.0%	coding (401/924 nt)	PP_1500 →	lipoprotein
RA	1,706,382:1	+A	10.0%	coding (405/924 nt)	PP_1500 →	lipoprotein
RA	1,707,330:1	+A	7.0%	intergenic (+106/+36)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,335	Δ1 bp	7.3%	intergenic (+111/+31)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,710,203	T→A	10.2%	A260A (GCT→GCA)	ppc →	phosphoenolpyruvate carboxylase
RA	1,712,993	T→A	8.9%	intergenic (+34/‑106)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,712,994	T→A	7.6%	intergenic (+35/‑105)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,713,554	G→T	6.3%	P152P (CCG→CCT)	tsaB →	endopeptidase
RA	1,713,557	A→C	5.8%	A153A (GCA→GCC)	tsaB →	endopeptidase
RA	1,714,509	T→G	10.9%	L104R (CTG→CGG)	PP_1509 →	hypothetical protein
RA	1,718,111	G→C	14.5%	L256F (TTG→TTC)	rsmJ →	ribosomal RNA small subunit methyltransferase J
RA	1,721,939	T→C	7.1%	V177A (GTC→GCC)	PP_1517 →	RND family transporter
RA	1,721,945	T→A	7.4%	L179Q (CTG→CAG)	PP_1517 →	RND family transporter
RA	1,722,400	G→A	6.8%	A331T (GCC→ACC)	PP_1517 →	RND family transporter
RA	1,725,151	A→C	8.9%	S20R (AGT→AGG)	PP_1518 ←	hypothetical protein
RA	1,725,886	G→T	6.1%	Q774K (CAG→AAG)	plsB ←	glycerol‑3‑phosphate acyltransferase
RA	1,725,887	A→C	6.2%	L773L (CTT→CTG)	plsB ←	glycerol‑3‑phosphate acyltransferase
RA	1,726,527	A→T	5.3%	L560Q (CTG→CAG)	plsB ←	glycerol‑3‑phosphate acyltransferase
RA	1,726,530	A→T	5.3%	L559Q (CTG→CAG)	plsB ←	glycerol‑3‑phosphate acyltransferase
RA	1,728,698	A→G	9.1%	intergenic (+50/+73)	cspA‑I → / ← PP_1523	major cold shock protein/hypothetical protein
RA	1,728,699	C→T	8.0%	intergenic (+51/+72)	cspA‑I → / ← PP_1523	major cold shock protein/hypothetical protein
RA	1,731,570	G→C	11.4%	P781R (CCG→CGG)	PP_1526 ←	beta‑(1‑3)‑glucosyl transferase
RA	1,731,573	G→A	11.3%	T780M (ACG→ATG) ‡	PP_1526 ←	beta‑(1‑3)‑glucosyl transferase
RA	1,731,574	T→C	10.9%	T780A (ACG→GCG) ‡	PP_1526 ←	beta‑(1‑3)‑glucosyl transferase
RA	1,731,577	G→C	11.5%	R779G (CGC→GGC)	PP_1526 ←	beta‑(1‑3)‑glucosyl transferase
RA	1,731,927	A→T	6.8%	L662Q (CTG→CAG)	PP_1526 ←	beta‑(1‑3)‑glucosyl transferase
RA	1,731,930	A→T	6.8%	L661Q (CTG→CAG)	PP_1526 ←	beta‑(1‑3)‑glucosyl transferase
RA	1,751,022	C→G	8.9%	D113E (GAC→GAG)	PP_1551 →	replication protein O
RA	1,776,194	C→T	6.4%	G76G (GGC→GGT)	PP_1583 →	structural protein P5
RA	1,780,108	G→A	18.3%	intergenic (+25/+81)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,786,064	T→A	10.0%	intergenic (+38/‑148)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,786,065	T→A	10.0%	intergenic (+39/‑147)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,786,066	T→A	10.0%	intergenic (+40/‑146)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,786,986	A→G	8.5%	T259A (ACC→GCC)	tsf →	elongation factor Ts
RA	1,786,994	C→T	13.2%	F261F (TTC→TTT)	tsf →	elongation factor Ts
RA	1,786,995	A→G	15.0%	K262E (AAA→GAA)	tsf →	elongation factor Ts
RA	1,787,003	C→T	15.0%	G264G (GGC→GGT)	tsf →	elongation factor Ts
RA	1,796,969	G→A	10.0%	R39H (CGT→CAT)	fabZ →	3‑hydroxyacyl‑ACP dehydratase FabZ
RA	1,808,650	C→G	8.1%	T220S (ACT→AGT)	kdsA‑I →	2‑dehydro‑3‑deoxyphosphooctonate aldolase
RA	1,810,377	T→G	10.8%	intergenic (+96/‑73)	eno → / → ftsB	enolase/cell division protein
RA	1,810,378	C→A	10.8%	intergenic (+97/‑72)	eno → / → ftsB	enolase/cell division protein
RA	1,818,526	A→G	16.0%	Y209C (TAC→TGC)	PP_1622 →	M23B subfamily metallopeptidase
RA	1,818,531	C→T	15.7%	H211Y (CAT→TAT)	PP_1622 →	M23B subfamily metallopeptidase
RA	1,818,534	A→G	12.6%	N212D (AAC→GAC)	PP_1622 →	M23B subfamily metallopeptidase
RA	1,818,539	C→T	14.2%	R213R (CGC→CGT)	PP_1622 →	M23B subfamily metallopeptidase
RA	1,825,133	G→C	10.2%	R55G (CGC→GGC)	mutS ←	DNA mismatch repair protein MutS
RA	1,843,613	T→C	100%	N408S (AAC→AGC)	gacS ←	sensor protein GacS
RA	1,846,339	Δ1 bp	12.0%	coding (588/1377 nt)	pfeS‑II →	histidine kinase
RA	1,846,345:1	+A	11.1%	coding (594/1377 nt)	pfeS‑II →	histidine kinase
RA	1,848,831	G→C	6.1%	G77A (GGC→GCC)	cysM →	cysteine synthase B
RA	1,848,839	C→A	6.1%	L80M (CTG→ATG) ‡	cysM →	cysteine synthase B
RA	1,848,840	T→G	6.3%	L80R (CTG→CGG) ‡	cysM →	cysteine synthase B
JC	1,852,158	+TGGCC	100%	coding (1202/2241 nt)	relA →	ATP:GTP 3'‑pyrophosphotransferase
RA	1,853,769	C→G	6.3%	T150S (ACC→AGC)	mazG →	modified nucleoside triphosphate pyrophosphohydrolase
RA	1,854,598	G→A	7.3%	A140T (GCC→ACC)	PP_1658 →	hypothetical protein
RA	1,858,489	C→G	6.4%	P542P (CCC→CCG)	PP_1661 →	dehydrogenase
RA	1,859,150	C→G	11.0%	intergenic (+28/+73)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,156	A→T	11.4%	intergenic (+34/+67)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,162	C→G	9.4%	intergenic (+40/+61)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,569	A→C	10.0%	intergenic (‑119/+37)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,571	T→A	8.4%	intergenic (‑121/+35)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,573	G→T	8.0%	intergenic (‑123/+33)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,863,282	T→A	9.7%	L309Q (CTG→CAG)	PP_1666 →	hypothetical protein
RA	1,863,320	G→C	7.2%	A322P (GCG→CCG)	PP_1666 →	hypothetical protein
RA	1,866,154	T→A	13.3%	M206K (ATG→AAG)	PP_1669 →	NLP/P60 family protein
RA	1,871,462	C→T	5.5%	Q232* (CAG→TAG) ‡	cobC →	adenosylcobinamide‑phosphate synthase subunit beta
RA	1,871,463	A→G	5.2%	Q232R (CAG→CGG) ‡	cobC →	adenosylcobinamide‑phosphate synthase subunit beta
RA	1,897,181	T→A	7.1%	noncoding (9/52 nt)	PP_mr24 ←	mini‑ykkC regulatory region
RA	1,897,184	T→A	7.1%	noncoding (6/52 nt)	PP_mr24 ←	mini‑ykkC regulatory region
RA	1,897,227	C→T	7.9%	intergenic (‑38/+106)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,230	G→A	6.4%	intergenic (‑41/+103)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,231	A→C	6.5%	intergenic (‑42/+102)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,245	G→T	16.4%	intergenic (‑56/+88)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,249	T→A	16.7%	intergenic (‑60/+84)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,253	A→C	15.3%	intergenic (‑64/+80)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,899,259	C→T	6.3%	intergenic (+287/‑233)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,899,320	A→G	8.5%	intergenic (+348/‑172)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,899,384	A→G	7.5%	intergenic (+412/‑108)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,899,389	C→T	6.0%	intergenic (+417/‑103)	PP_t18 → / → PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
RA	1,899,849	A→T	12.3%	K120* (AAG→TAG) ‡	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,899,850	A→T	13.9%	K120M (AAG→ATG) ‡	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,900,744	G→A	6.9%	G418D (GGC→GAC)	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,901,074	T→C	6.6%	L528S (TTG→TCG)	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,903,567	G→C	17.9%	intergenic (+50/‑221)	PP_1703 → / → nirB	assimilatory nitrate reductase/sulfite reductase/nitrite reductase large subunit
RA	1,903,568	G→C	17.4%	intergenic (+51/‑220)	PP_1703 → / → nirB	assimilatory nitrate reductase/sulfite reductase/nitrite reductase large subunit
RA	1,907,549	T→C	7.5%	T78A (ACC→GCC)	PP_1707 ←	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
RA	1,907,550	G→A	7.2%	G77G (GGC→GGT)	PP_1707 ←	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
RA	1,909,160	G→A	12.7%	Q45* (CAG→TAG)	PP_1709 ←	fumarylacetoacetate hydrolase family protein
RA	1,909,167	C→G	11.3%	A42A (GCG→GCC)	PP_1709 ←	fumarylacetoacetate hydrolase family protein
RA	1,909,174	T→C	8.5%	Y40C (TAC→TGC)	PP_1709 ←	fumarylacetoacetate hydrolase family protein
RA	1,921,591	T→A	14.2%	intergenic (+24/+37)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,921,592	T→A	14.1%	intergenic (+25/+36)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,924,567	A→T	8.6%	F115Y (TTT→TAT)	PP_1724 ←	2‑aminoethylphosphonate ABC transporter permease
RA	1,933,707	G→T	9.2%	R30R (CGC→CGA)	minD ←	MinC‑MinD‑MinE system ATPase
RA	1,933,712	G→C	9.5%	L29V (CTG→GTG)	minD ←	MinC‑MinD‑MinE system ATPase
RA	1,933,717	A→C	9.5%	L27R (CTC→CGC)	minD ←	MinC‑MinD‑MinE system ATPase
RA	1,940,454	G→C	21.1%	A289G (GCC→GGC)	PP_1740 ←	beta (1‑6) glucans synthase
RA	1,941,426	G→A	7.0%	intergenic (‑107/‑76)	PP_1740 ← / → betX	beta (1‑6) glucans synthase/choline/betaine/carnitine ABC transporter substrate‑binding protein BetX
RA	1,955,252	T→A	11.8%	intergenic (+39/‑154)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,955,253	T→A	11.8%	intergenic (+40/‑153)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,967,204	T→A	5.6%	intergenic (+31/+88)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,205	T→A	5.6%	intergenic (+32/+87)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,967,284	A→G	7.0%	intergenic (+111/+8)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,976,324	C→G	9.0%	intergenic (+109/‑56)	pheA → / → PP_1770	bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase
RA	1,981,135	T→G	13.7%	intergenic (+31/‑269)	rpsA → / → ihfB	30S ribosomal protein S1/integration host factor subunit beta
RA	1,981,136	C→A	13.6%	intergenic (+32/‑268)	rpsA → / → ihfB	30S ribosomal protein S1/integration host factor subunit beta
RA	1,993,644:1	+T	8.5%	intergenic (+39/+59)	PP_1780 → / ← PP_1781	mannosyltransferase/acyltransferase
RA	1,993,647	Δ1 bp	8.5%	intergenic (+42/+56)	PP_1780 → / ← PP_1781	mannosyltransferase/acyltransferase
RA	1,998,723	A→T	7.0%	L267H (CTT→CAT)	rffG ←	dTDP‑glucose 4,6‑dehydratase
RA	2,000,456	A→C	11.1%	K118N (AAA→AAC)	PP_1786 →	glycosyl transferase
RA	2,000,461	G→C	11.1%	G120A (GGC→GCC)	PP_1786 →	glycosyl transferase
RA	2,000,466	G→T	11.1%	V122F (GTT→TTT)	PP_1786 →	glycosyl transferase
RA	2,004,613	G→A	10.2%	intergenic (+60/+90)	PP_1787 → / ← PP_1788	hypothetical protein/hypothetical protein
RA	2,004,616	T→C	10.2%	intergenic (+63/+87)	PP_1787 → / ← PP_1788	hypothetical protein/hypothetical protein
RA	2,019,126	C→A	7.4%	L120M (CTG→ATG) ‡	PP_1797 →	HlyD family secretion protein
RA	2,019,127	T→G	7.1%	L120R (CTG→CGG) ‡	PP_1797 →	HlyD family secretion protein
RA	2,021,530	G→C	9.0%	intergenic (+24/‑415)	PP_1798 → / → gmd	outer membrane efflux protein/GDP‑mannose 4,6‑dehydratase
RA	2,021,531	G→C	9.0%	intergenic (+25/‑414)	PP_1798 → / → gmd	outer membrane efflux protein/GDP‑mannose 4,6‑dehydratase
RA	2,021,532	G→C	8.5%	intergenic (+26/‑413)	PP_1798 → / → gmd	outer membrane efflux protein/GDP‑mannose 4,6‑dehydratase
RA	2,057,853	G→T	6.0%	intergenic (+26/+102)	PP_1832 → / ← PP_1833	oxidase/hypothetical protein
RA	2,057,854	A→C	6.1%	intergenic (+27/+101)	PP_1832 → / ← PP_1833	oxidase/hypothetical protein
RA	2,062,881	G→C	6.8%	A585P (GCT→CCT)	PP_1838 →	membrane protein
RA	2,068,194	A→T	26.9%	intergenic (‑96/+25)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,068,195	A→T	26.9%	intergenic (‑97/+24)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,087,376	C→G	8.9%	intergenic (+146/+772)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,377	C→G	8.9%	intergenic (+147/+771)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,092,469	T→A	6.9%	intergenic (+72/+19)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,092,470	T→A	6.9%	intergenic (+73/+18)	deaD → / ← ygiD	ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase
RA	2,095,713	G→A	6.2%	L270L (CTG→TTG)	alaA ←	glutamate‑pyruvate aminotransferase
RA	2,097,506	G→C	9.6%	S137T (AGT→ACT)	gpx →	hydroperoxy fatty acid reductase Gpx1
RA	2,097,512	A→G	10.4%	Q139R (CAG→CGG)	gpx →	hydroperoxy fatty acid reductase Gpx1
RA	2,099,993	G→C	5.9%	intergenic (‑61/‑144)	PP_1875 ← / → PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
RA	2,099,995	G→C	6.9%	intergenic (‑63/‑142)	PP_1875 ← / → PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
RA	2,100,001	T→G	7.5%	intergenic (‑69/‑136)	PP_1875 ← / → PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
RA	2,100,002	G→C	7.2%	intergenic (‑70/‑135)	PP_1875 ← / → PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
RA	2,103,203	C→G	27.0%	noncoding (35/76 nt)	PP_t24 →	tRNA‑Gly
RA	2,119,214	G→A	7.3%	G108R (GGG→AGG)	PP_1885 →	hypothetical protein
RA	2,119,217	T→C	7.7%	L109L (TTG→CTG)	PP_1885 →	hypothetical protein
RA	2,119,220	C→A	6.9%	L110I (CTC→ATC) ‡	PP_1885 →	hypothetical protein
RA	2,119,221	T→G	7.7%	L110R (CTC→CGC) ‡	PP_1885 →	hypothetical protein
RA	2,119,224	G→A	6.9%	S111N (AGC→AAC)	PP_1885 →	hypothetical protein
RA	2,119,227	T→C	7.2%	L112P (CTG→CCG)	PP_1885 →	hypothetical protein
RA	2,127,894	G→T	7.3%	L1074F (TTG→TTT)	PP_1887 →	hypothetical protein
RA	2,134,321	G→T	7.9%	intergenic (‑44/+25)	PP_1892 ← / ← fadE	hypothetical protein/medium‑long chain acyl‑CoA dehydrogenase
RA	2,138,452	T→G	8.3%	L171R (CTG→CGG)	yadG →	ABC transporter ATP‑binding protein
RA	2,138,457	C→A	8.5%	R173S (CGC→AGC)	yadG →	ABC transporter ATP‑binding protein
RA	2,146,919	C→T	8.5%	Q269* (CAG→TAG)	murB →	UDP‑N‑acetylenolpyruvoylglucosamine reductase
RA	2,154,429	T→G	7.8%	Q129P (CAG→CCG)	PP_1909 ←	septum formation protein
RA	2,154,434	T→A	7.7%	Q127H (CAA→CAT)	PP_1909 ←	septum formation protein
RA	2,173,052	T→A	9.2%	Q165H (CAA→CAT) ‡	PP_1925 ←	monooxygenase
RA	2,173,053	T→A	9.2%	Q165L (CAA→CTA) ‡	PP_1925 ←	monooxygenase
RA	2,189,684	A→C	6.6%	N170H (AAC→CAC)	PP_1937 →	helicase
RA	2,189,689	G→T	6.9%	V171V (GTG→GTT)	PP_1937 →	helicase
RA	2,210,278	C→A	7.7%	V160V (GTC→GTA)	PP_1953 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	2,224,873	C→T	5.8%	E601E (GAG→GAA) ‡	PP_1963 ←	hypothetical protein
RA	2,224,875	C→G	5.6%	E601Q (GAG→CAG) ‡	PP_1963 ←	hypothetical protein
RA	2,224,877	A→G	6.0%	I600T (ATT→ACT)	PP_1963 ←	hypothetical protein
RA	2,232,826	C→T	7.0%	Q108* (CAG→TAG)	PP_1971 →	hypothetical protein
RA	2,241,886	G→C	12.3%	noncoding (35/76 nt)	PP_t27 →	tRNA‑Ala
RA	2,242,141	G→C	13.5%	noncoding (35/76 nt)	PP_t29 →	tRNA‑Ala
RA	2,246,284	C→T	16.8%	intergenic (+30/+61)	ibpA → / ← PP_1983	small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
RA	2,246,285	A→G	21.5%	intergenic (+31/+60)	ibpA → / ← PP_1983	small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
RA	2,256,241	G→C	14.0%	intergenic (+258/‑446)	asd → / → PP_1990	aspartate‑semialdehyde dehydrogenase/transposase
RA	2,256,242	G→C	14.0%	intergenic (+259/‑445)	asd → / → PP_1990	aspartate‑semialdehyde dehydrogenase/transposase
RA	2,263,483	C→A	5.6%	P78Q (CCG→CAG)	trpF →	N‑(5'‑phosphoribosyl)anthranilate isomerase
RA	2,263,486	T→G	5.3%	L79R (CTG→CGG)	trpF →	N‑(5'‑phosphoribosyl)anthranilate isomerase
RA	2,273,095	A→G	10.1%	intergenic (+17/+274)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,105	C→G	18.7%	intergenic (+27/+264)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,109	A→T	17.7%	intergenic (+31/+260)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,113	C→G	17.8%	intergenic (+35/+256)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,123	C→T	10.5%	intergenic (+45/+246)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,702	C→G	7.1%	R236R (CGG→CGC)	PP_2004 ←	AraC family transcriptional regulator
RA	2,273,705	C→G	6.3%	T235T (ACG→ACC)	PP_2004 ←	AraC family transcriptional regulator
RA	2,281,073	T→A	11.2%	intergenic (+88/‑149)	fadH → / → PP_2009	2,4‑dienoyl‑CoA reductase/1‑aminocyclopropane‑1‑carboxylate deaminase
RA	2,282,780	T→G	8.0%	intergenic (‑129/+100)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,813	T→G	33.8%	intergenic (‑162/+67)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,817	G→C	30.5%	intergenic (‑166/+63)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,818	G→C	30.6%	intergenic (‑167/+62)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,822	C→A	28.9%	intergenic (‑171/+58)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,855	C→A	10.1%	intergenic (‑204/+25)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,862	G→A	9.3%	intergenic (‑211/+18)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,283,014	A→T	5.8%	W282R (TGG→AGG)	PP_2011 ←	hypothetical protein
RA	2,305,255	G→A	11.7%	L449L (CTG→TTG)	PP_2028 ←	TPR repeat‑containing protein
RA	2,305,256	T→C	10.6%	Q448Q (CAA→CAG)	PP_2028 ←	TPR repeat‑containing protein
RA	2,307,312	T→C	9.6%	K121E (AAG→GAG)	PP_2029 ←	von Willebrand factor type A domain‑containing protein
RA	2,307,317	A→T	9.4%	L119Q (CTG→CAG)	PP_2029 ←	von Willebrand factor type A domain‑containing protein
RA	2,307,322	G→A	9.7%	L117L (CTC→CTT)	PP_2029 ←	von Willebrand factor type A domain‑containing protein
RA	2,315,535	T→C	5.7%	K154E (AAG→GAG)	PP_2037 ←	aldolase
RA	2,315,536	G→A	5.6%	L153L (CTC→CTT)	PP_2037 ←	aldolase
RA	2,336,540	C→T	5.7%	intergenic (‑41/+39)	PP_2052 ← / ← PP_5500	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein
RA	2,336,541	A→T	5.8%	intergenic (‑42/+38)	PP_2052 ← / ← PP_5500	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein
RA	2,336,542	A→G	5.8%	intergenic (‑43/+37)	PP_2052 ← / ← PP_5500	bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein
RA	2,356,554	C→A	8.3%	G104V (GGC→GTC)	PP_2070 ←	AraC family transcriptional regulator
RA	2,356,557	T→G	7.1%	D103A (GAC→GCC)	PP_2070 ←	AraC family transcriptional regulator
RA	2,360,340	G→A	9.1%	A287V (GCA→GTA)	PP_2075 ←	membrane protein
RA	2,361,762	C→G	6.2%	G720R (GGC→CGC)	PP_2076 ←	hypothetical protein
RA	2,361,767	C→G	6.4%	R718P (CGG→CCG)	PP_2076 ←	hypothetical protein
RA	2,371,656	G→T	8.1%	A1477A (GCG→GCT)	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,371,663	A→C	11.0%	S1480R (AGC→CGC)	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,376,114	T→A	6.2%	L142Q (CTG→CAG)	PP_2083 →	lipase
RA	2,380,790	T→C	10.0%	A137A (GCT→GCC)	oprF →	porin F
RA	2,380,791	G→A	10.1%	G138S (GGC→AGC)	oprF →	porin F
RA	2,381,445	T→G	16.3%	intergenic (+31/+56)	oprF → / ← cobA	porin F/uroporphyrinogen‑III C‑methyltransferase
RA	2,381,446	C→A	13.9%	intergenic (+32/+55)	oprF → / ← cobA	porin F/uroporphyrinogen‑III C‑methyltransferase
RA	2,382,118	C→T	8.9%	V42M (GTG→ATG)	cobA ←	uroporphyrinogen‑III C‑methyltransferase
RA	2,383,964	G→A	7.5%	T407T (ACC→ACT)	nasA ←	nitrate transporter
RA	2,383,967	G→C	7.6%	V406V (GTC→GTG)	nasA ←	nitrate transporter
RA	2,383,970	T→C	7.7%	A405A (GCA→GCG)	nasA ←	nitrate transporter
RA	2,385,520	Δ1 bp	10.5%	coding (401/576 nt)	PP_2093 ←	two‑component system response regulator NasT
RA	2,385,526:1	+A	10.7%	coding (395/576 nt)	PP_2093 ←	two‑component system response regulator NasT
RA	2,388,295	A→T	7.1%	M338L (ATG→TTG)	pyrD →	dihydroorotate dehydrogenase
RA	2,395,626	G→C	20.1%	intergenic (‑191/+52)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,395,628	A→T	19.9%	intergenic (‑193/+50)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,395,630	G→C	21.1%	intergenic (‑195/+48)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,402,354	A→T	5.3%	L19Q (CTG→CAG)	PP_2103 ←	hypothetical protein
RA	2,403,353	T→A	10.5%	intergenic (‑249/‑64)	PP_2105 ← / → PP_2106	hypothetical protein/ammonium transporter
RA	2,407,007	A→G	5.5%	intergenic (+219/+35)	PP_2110 → / ← PP_2111	ribosomal large subunit pseudouridine synthase/aerotaxis receptor
RA	2,407,008	G→C	6.6%	intergenic (+220/+34)	PP_2110 → / ← PP_2111	ribosomal large subunit pseudouridine synthase/aerotaxis receptor
RA	2,410,904	T→G	6.7%	E196A (GAG→GCG)	acnA‑I ←	aconitate hydratase
RA	2,412,919	G→C	7.1%	intergenic (+140/‑281)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,412,920	G→C	6.7%	intergenic (+141/‑280)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,412,937:1	+C	6.5%	intergenic (+158/‑263)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,412,947	G→C	9.5%	intergenic (+168/‑253)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,412,948	G→C	8.3%	intergenic (+169/‑252)	rlmM → / → PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
RA	2,416,597	A→T	7.3%	intergenic (+87/+28)	pdxB → / ← PP_2118	erythronate‑4‑phosphate dehydrogenase/hypothetical protein
RA	2,416,598	A→T	7.3%	intergenic (+88/+27)	pdxB → / ← PP_2118	erythronate‑4‑phosphate dehydrogenase/hypothetical protein
RA	2,420,641	Δ1 bp	17.5%	intergenic (+81/+26)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,420,645:1	+T	16.9%	intergenic (+85/+22)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,422,671	A→T	5.1%	N306Y (AAC→TAC)	moeA →	molybdenum::molybdopterin ligase
RA	2,426,659	T→C	10.9%	E93G (GAG→GGG)	PP_2127 ←	sensor histidine kinase
RA	2,426,664:1	+G	11.6%	coding (273/942 nt)	PP_2127 ←	sensor histidine kinase
RA	2,426,669	Δ1 bp	11.6%	coding (268/942 nt)	PP_2127 ←	sensor histidine kinase
RA	2,426,675	G→A	10.9%	P88S (CCG→TCG)	PP_2127 ←	sensor histidine kinase
RA	2,434,537	G→A	9.1%	H38Y (CAC→TAC)	PP_2132 ←	universal stress protein
RA	2,444,458	A→C	21.2%	*159G (TGA→GGA)	sulA ←	cell division inhibitor SulA
RA	2,444,462	G→T	19.7%	L157L (CTC→CTA) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,463	A→C	20.0%	L157R (CTC→CGC) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,467	G→T	19.7%	R156S (CGC→AGC)	sulA ←	cell division inhibitor SulA
RA	2,445,401	G→C	6.7%	R52G (CGC→GGC)	lexA‑I ←	transcriptional repressor
RA	2,445,402	G→C	6.7%	A51A (GCC→GCG)	lexA‑I ←	transcriptional repressor
RA	2,468,304	G→C	10.0%	intergenic (‑25/+98)	PP_2161 ← / ← PP_2162	hypothetical protein/phosphonoacetaldehyde phosphonohydrolase‑like protein
RA	2,471,531	C→T	7.0%	A351A (GCC→GCT)	PP_2165 →	two‑component system response regulator
RA	2,483,440	G→A	11.8%	R88H (CGC→CAC)	puuA‑I →	glutamate‑putrescine ligase
RA	2,483,443	T→A	11.5%	L89Q (CTG→CAG)	puuA‑I →	glutamate‑putrescine ligase
RA	2,483,446	T→C	13.4%	V90A (GTG→GCG)	puuA‑I →	glutamate‑putrescine ligase
RA	2,499,449	C→A	6.3%	P436Q (CCG→CAG)	PP_2193 →	ferric siderophore receptor
RA	2,509,938	T→A	7.0%	Q40L (CAG→CTG)	copB‑I ←	copper resistance protein B
RA	2,509,944	C→G	6.8%	G38A (GGC→GCC)	copB‑I ←	copper resistance protein B
RA	2,509,950	T→A	6.9%	Q36L (CAG→CTG)	copB‑I ←	copper resistance protein B
RA	2,529,043	G→C	10.3%	intergenic (+127/‑280)	PP_2217 → / → PP_2218	enoyl‑CoA hydratase/transposase
RA	2,529,044	G→C	10.4%	intergenic (+128/‑279)	PP_2217 → / → PP_2218	enoyl‑CoA hydratase/transposase
RA	2,532,698	C→A	7.3%	Q143K (CAG→AAG)	PP_2223 →	hypothetical protein
RA	2,540,852	T→A	14.0%	intergenic (+22/+27)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,540,853	G→C	13.6%	intergenic (+23/+26)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,540,854	T→A	13.7%	intergenic (+24/+25)	PP_2232 → / ← PP_2233	XRE family transcriptional regulator/isochorismatase family hydrolase
RA	2,560,505	T→A	7.9%	W142R (TGG→AGG) ‡	PP_2243 →	hypothetical protein
RA	2,560,507	G→C	7.9%	W142C (TGG→TGC) ‡	PP_2243 →	hypothetical protein
RA	2,560,509	T→A	7.9%	L143Q (CTG→CAG)	PP_2243 →	hypothetical protein
RA	2,567,124	Δ1 bp	8.2%	coding (847/879 nt)	PP_2250 ←	LysR family transcriptional regulator
RA	2,567,128:1	+C	8.7%	coding (843/879 nt)	PP_2250 ←	LysR family transcriptional regulator
RA	2,576,513	G→T	7.8%	W549C (TGG→TGT)	PP_2258 →	sensory box protein
RA	2,576,516	A→C	9.3%	A550A (GCA→GCC)	PP_2258 →	sensory box protein
RA	2,601,118	G→A	13.3%	A184A (GCG→GCA)	PP_2279 →	head‑to‑tail joining protein
RA	2,601,123	T→C	12.9%	L186P (CTG→CCG)	PP_2279 →	head‑to‑tail joining protein
RA	2,601,223	C→T	6.5%	L219L (CTC→CTT)	PP_2279 →	head‑to‑tail joining protein
RA	2,601,224	A→G	7.6%	K220E (AAG→GAG)	PP_2279 →	head‑to‑tail joining protein
RA	2,628,429	A→C	7.0%	A16A (GCA→GCC)	clpP →	ATP‑dependent Clp protease proteolytic subunit
RA	2,628,430	G→T	7.8%	G17C (GGC→TGC)	clpP →	ATP‑dependent Clp protease proteolytic subunit
RA	2,633,500	T→G	11.4%	intergenic (+100/‑82)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,633,501	C→A	11.6%	intergenic (+101/‑81)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,640,261	G→A	5.8%	L147L (CTG→TTG)	PP_2310 ←	methyl‑accepting chemotaxis transducer
RA	2,650,203	A→T	8.5%	intergenic (+99/+35)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,650,204	A→T	7.8%	intergenic (+100/+34)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,664,179	T→C	7.8%	intergenic (+161/‑2)	prpC → / → acnA‑II	methylcitrate synthase/aconitate hydratase
RA	2,669,714	T→G	23.8%	intergenic (+38/+37)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,669,717	C→A	22.3%	intergenic (+41/+34)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,673,220	A→C	6.3%	D164A (GAT→GCT)	PP_2340 →	hypothetical protein
RA	2,673,225	A→C	6.1%	M166L (ATG→CTG) ‡	PP_2340 →	hypothetical protein
RA	2,673,226	T→A	6.2%	M166K (ATG→AAG) ‡	PP_2340 →	hypothetical protein
RA	2,685,639	T→A	7.1%	Q709L (CAG→CTG)	PP_2354 ←	two‑component system sensor histidine kinase/response regulator
RA	2,693,846	G→A	18.6%	A32T (GCC→ACC)	PP_2362 →	usher protein
RA	2,708,585	A→G	8.7%	W223R (TGG→CGG)	cysI ←	sulfite reductase hemoprotein subunit beta
RA	2,708,586	C→T	8.6%	P222P (CCG→CCA)	cysI ←	sulfite reductase hemoprotein subunit beta
RA	2,709,508	T→C	6.4%	L15P (CTG→CCG) ‡	PP_2372 →	sugar‑binding protein
RA	2,709,509	G→A	6.4%	L15L (CTG→CTA) ‡	PP_2372 →	sugar‑binding protein
RA	2,711,029	T→G	7.8%	intergenic (+289/+25)	PP_2373 → / ← PP_2374	hypothetical protein/hypothetical protein
RA	2,711,030	C→A	7.9%	intergenic (+290/+24)	PP_2373 → / ← PP_2374	hypothetical protein/hypothetical protein
RA	2,718,027	G→A	10.5%	P68P (CCG→CCA)	PP_2377 →	acyltransferase
RA	2,719,298	Δ1 bp	5.7%	coding (382/585 nt)	nfuA →	Fe/S biogenesis protein NfuA
RA	2,719,306:1	+T	5.7%	coding (390/585 nt)	nfuA →	Fe/S biogenesis protein NfuA
RA	2,722,986	G→A	5.0%	P217S (CCA→TCA)	PP_2383 ←	AraC family transcriptional regulator
RA	2,730,937	C→G	13.1%	R77R (CGC→CGG)	polB →	DNA polymerase II
RA	2,730,938	C→G	10.9%	P78A (CCG→GCG)	polB →	DNA polymerase II
RA	2,745,132	G→A	5.5%	D210N (GAT→AAT)	PP_2399 →	hypothetical protein
RA	2,749,325	C→T	6.6%	H98Y (CAC→TAC) ‡	PP_2405 →	hypothetical protein
RA	2,749,326	A→G	6.5%	H98R (CAC→CGC) ‡	PP_2405 →	hypothetical protein
RA	2,753,616	T→A	9.1%	L377Q (CTG→CAG)	czcB‑II →	cobalt‑zinc‑cadmium resistance protein
RA	2,755,723	C→T	6.6%	P669L (CCG→CTG)	czcA‑II →	cation efflux system protein
RA	2,755,726	T→A	6.7%	I670N (ATT→AAT)	czcA‑II →	cation efflux system protein
RA	2,755,729	A→G	6.9%	Q671R (CAG→CGG)	czcA‑II →	cation efflux system protein
RA	2,760,361	T→C	6.9%	N209D (AAC→GAC)	PP_2413 ←	GGDEF domain‑containing protein
RA	2,764,407	G→A	10.2%	A213V (GCC→GTC)	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,764,415	T→G	10.2%	A210A (GCA→GCC) ‡	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,764,416	G→A	10.5%	A210V (GCA→GTA) ‡	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,782,257	T→G	6.1%	N51T (AAC→ACC)	iscS‑II ←	cysteine desulfurase
RA	2,782,260	C→A	8.0%	G50V (GGT→GTT)	iscS‑II ←	cysteine desulfurase
RA	2,789,637	G→C	6.1%	*63S (TGA→TCA)	PP_2441 →	hypothetical protein
RA	2,790,100	T→A	6.4%	Q64L (CAG→CTG)	PP_2442 ←	DUF480 domain‑containing protein
RA	2,790,103	C→T	6.7%	G63D (GGC→GAC)	PP_2442 ←	DUF480 domain‑containing protein
RA	2,790,106	A→G	6.7%	V62A (GTC→GCC)	PP_2442 ←	DUF480 domain‑containing protein
RA	2,790,109	T→A	6.7%	Q61L (CAG→CTG)	PP_2442 ←	DUF480 domain‑containing protein
RA	2,791,129	C→G	6.6%	L154F (TTG→TTC)	sstT ←	serine/threonine transporter SstT
RA	2,799,214	A→G	13.6%	intergenic (‑185/+31)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,220	C→T	12.3%	intergenic (‑191/+25)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,223	A→G	11.9%	intergenic (‑194/+22)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,229	C→T	12.7%	intergenic (‑200/+16)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,812,772	G→A	11.9%	intergenic (+23/‑87)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,774	T→C	11.6%	intergenic (+25/‑85)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,781	G→A	11.9%	intergenic (+32/‑78)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,783	T→C	11.9%	intergenic (+34/‑76)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,826,868	G→C	10.7%	A80P (GCA→CCA)	PP_2479 →	cytochrome c family protein
RA	2,826,873	G→C	11.1%	W81C (TGG→TGC)	PP_2479 →	cytochrome c family protein
RA	2,831,323	T→C	6.8%	K84R (AAA→AGA)	PP_2484 ←	ArsR family transcriptional regulator
RA	2,841,978	T→A	10.2%	intergenic (‑114/+138)	yqhD ← / ← PP_2493	NAD(P)‑dependent alcohol dehydrogenase/RadC family protein
RA	2,841,979	T→A	10.2%	intergenic (‑115/+137)	yqhD ← / ← PP_2493	NAD(P)‑dependent alcohol dehydrogenase/RadC family protein
RA	2,852,440	T→A	14.4%	Q312L (CAG→CTG)	PP_2505 ←	GAF domain/GGDEF domain‑containing protein
RA	2,873,690	G→A	6.8%	V143M (GTG→ATG) ‡	cigR →	membrane protein
RA	2,873,691	T→C	7.0%	V143A (GTG→GCG) ‡	cigR →	membrane protein
RA	2,884,855	C→G	7.1%	P93A (CCG→GCG) ‡	PP_2540 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	2,884,856	C→G	8.8%	P93R (CCG→CGG) ‡	PP_2540 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	2,894,029	G→A	10.6%	G326S (GGC→AGC)	PP_2548 →	sugar MFS transporter
RA	2,894,035	G→A	10.6%	V328M (GTG→ATG) ‡	PP_2548 →	sugar MFS transporter
RA	2,894,036	T→C	11.1%	V328A (GTG→GCG) ‡	PP_2548 →	sugar MFS transporter
RA	2,894,650	G→A	6.9%	G89E (GGG→GAG)	PP_2549 →	hypothetical protein
RA	2,896,846	G→A	5.3%	R41Q (CGG→CAG)	PP_2551 →	LysR family transcriptional regulator
RA	2,896,849	A→T	5.3%	Q42L (CAG→CTG)	PP_2551 →	LysR family transcriptional regulator
RA	2,896,852	T→C	5.2%	L43P (CTG→CCG)	PP_2551 →	LysR family transcriptional regulator
RA	2,899,207:1	+C	9.1%	coding (1389/1413 nt)	PP_2552 →	DOPA decarboxylase
RA	2,899,213	Δ1 bp	9.4%	coding (1395/1413 nt)	PP_2552 →	DOPA decarboxylase
RA	2,900,775	A→G	11.6%	intergenic (‑103/‑187)	PP_2553 ← / → quiC	MFS transporter/3‑dehydroshikimate dehydratase
RA	2,900,784	C→T	11.6%	intergenic (‑112/‑178)	PP_2553 ← / → quiC	MFS transporter/3‑dehydroshikimate dehydratase
RA	2,909,327	T→C	8.9%	Q385R (CAG→CGG) ‡	aprDA ←	alkaline protease secretion ABC transporter ATP‑binding protein
RA	2,909,328	G→A	9.2%	Q385* (CAG→TAG) ‡	aprDA ←	alkaline protease secretion ABC transporter ATP‑binding protein
RA	2,951,377	G→C	14.9%	intergenic (‑113/+48)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,384	A→C	17.6%	intergenic (‑120/+41)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,385	G→T	17.4%	intergenic (‑121/+40)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,392	G→C	16.3%	intergenic (‑128/+33)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,958,833	T→C	16.1%	intergenic (+56/+86)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,842	G→C	18.2%	intergenic (+65/+77)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,843	T→C	17.6%	intergenic (+66/+76)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,846	G→C	16.6%	intergenic (+69/+73)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,849	G→A	16.9%	intergenic (+72/+70)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,850	G→C	15.3%	intergenic (+73/+69)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,859	G→A	14.3%	intergenic (+82/+60)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,966,460	T→A	6.1%	R70R (CGA→CGT)	PP_2595 ←	ABC transporter permease/ATP‑binding protein
RA	2,982,740	C→G	6.9%	R161P (CGC→CCC)	PP_2608 ←	shikimate dehydrogenase family protein
RA	2,989,258	G→T	6.5%	R43R (CGG→AGG)	PP_2613 ←	hypothetical protein
RA	2,989,261	A→C	6.9%	Y42D (TAT→GAT)	PP_2613 ←	hypothetical protein
RA	2,998,971	T→C	10.9%	R20R (CGA→CGG)	PP_2622 ←	hypothetical protein
RA	2,998,974	G→A	7.8%	S19S (TCC→TCT)	PP_2622 ←	hypothetical protein
RA	2,998,983	T→C	8.1%	R16R (CGA→CGG)	PP_2622 ←	hypothetical protein
RA	2,998,986	G→A	8.0%	R15R (CGC→CGT)	PP_2622 ←	hypothetical protein
RA	3,001,858	C→G	10.0%	A180G (GCC→GGC)	PP_2625 →	hypothetical protein
RA	3,001,864	G→A	11.5%	R182Q (CGG→CAG)	PP_2625 →	hypothetical protein
RA	3,001,867	G→C	12.7%	G183A (GGC→GCC)	PP_2625 →	hypothetical protein
RA	3,001,870	T→C	11.9%	L184P (CTG→CCG)	PP_2625 →	hypothetical protein
RA	3,001,876	C→G	10.3%	A186G (GCC→GGC)	PP_2625 →	hypothetical protein
RA	3,012,112	A→T	7.9%	D377V (GAC→GTC)	bcsG →	endoglucanase
RA	3,018,013	A→T	10.7%	A631A (GCA→GCT)	bcsB →	cellulose synthase and translocator subunit
RA	3,018,014	A→T	9.9%	S632C (AGC→TGC)	bcsB →	cellulose synthase and translocator subunit
RA	3,024,250	G→C	9.3%	intergenic (+22/+132)	dapA‑II → / ← PP_2640	4‑hydroxy‑tetrahydrodipicolinate synthase/GNAT family acetyltransferase
RA	3,024,924	T→G	6.0%	P585P (CCA→CCC)	PP_2641 ←	iron‑sulfur cluster‑binding protein
RA	3,030,147	A→C	9.1%	intergenic (+104/‑590)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,150	G→T	9.3%	intergenic (+107/‑587)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,456	C→G	6.3%	intergenic (+413/‑281)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,460	G→C	5.4%	intergenic (+417/‑277)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,463	G→C	5.4%	intergenic (+420/‑274)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,762	C→T	12.5%	P9L (CCG→CTG)	mgtA →	ATP‑dependent magnesium transporter
RA	3,030,765	A→G	12.8%	Q10R (CAG→CGG)	mgtA →	ATP‑dependent magnesium transporter
RA	3,031,125	A→T	11.8%	K130M (AAG→ATG)	mgtA →	ATP‑dependent magnesium transporter
RA	3,031,132	C→G	10.5%	I132M (ATC→ATG)	mgtA →	ATP‑dependent magnesium transporter
RA	3,031,135	C→G	10.5%	I133M (ATC→ATG)	mgtA →	ATP‑dependent magnesium transporter
RA	3,031,138	C→G	11.6%	I134M (ATC→ATG)	mgtA →	ATP‑dependent magnesium transporter
RA	3,031,145	A→T	8.1%	M137L (ATG→TTG)	mgtA →	ATP‑dependent magnesium transporter
RA	3,032,688:1	+G	14.3%	coding (1952/2763 nt)	mgtA →	ATP‑dependent magnesium transporter
RA	3,047,960	C→G	13.2%	P224A (CCC→GCC) ‡	PP_2660 →	hypothetical protein
RA	3,047,961	C→G	13.6%	P224R (CCC→CGC) ‡	PP_2660 →	hypothetical protein
RA	3,048,625	T→C	9.1%	intergenic (+37/‑259)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,628	T→C	9.6%	intergenic (+40/‑256)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,633	A→G	9.1%	intergenic (+45/‑251)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,050,084:1	+C	7.8%	intergenic (+13/‑128)	PP_2662 → / → PP_2663	hypothetical protein/hypothetical protein
RA	3,050,088	Δ1 bp	7.7%	intergenic (+17/‑124)	PP_2662 → / → PP_2663	hypothetical protein/hypothetical protein
RA	3,051,881	T→A	10.5%	Y180N (TAC→AAC) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,051,882	A→G	10.5%	Y180C (TAC→TGC) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,051,887	C→T	11.5%	L182L (CTG→TTG) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,051,888	T→A	11.5%	L182Q (CTG→CAG) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,064,422	C→G	8.4%	T83R (ACG→AGG)	PP_2676 →	substrate‑binding protein
RA	3,100,605:1	+C	8.2%	coding (1341/1470 nt)	PP_2709 →	long‑chain fatty acid‑‑CoA ligase
RA	3,116,213	T→C	9.3%	L303P (CTG→CCG)	PP_2732 →	hypothetical protein
RA	3,116,218	G→A	9.3%	G305S (GGC→AGC)	PP_2732 →	hypothetical protein
RA	3,126,899	G→C	7.6%	A190G (GCC→GGC)	PP_2744 ←	ribose‑phosphate pyrophosphokinase family protein
RA	3,137,695	C→T	14.6%	intergenic (+80/‑210)	PP_2753 → / → PP_2754	ABC transporter ATP‑binding protein/OprD family outer membrane porin
RA	3,137,696	A→G	13.2%	intergenic (+81/‑209)	PP_2753 → / → PP_2754	ABC transporter ATP‑binding protein/OprD family outer membrane porin
RA	3,143,613	Δ1 bp	8.3%	coding (494/1539 nt)	rbsA‑II →	ribose ABC transporter ‑ ATP‑binding subunit
RA	3,146,621	G→C	9.4%	intergenic (+14/+52)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,622	G→C	9.1%	intergenic (+15/+51)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,158,080	G→T	12.1%	R19L (CGG→CTG)	opuA →	glycine betaine ABC transporter ATP‑binding protein/permease
RA	3,175,679	G→A	9.5%	V313M (GTG→ATG)	PP_2787 →	transporter
RA	3,189,321	G→C	14.5%	L458V (CTG→GTG)	PP_2799 ←	class III aminotransferase
RA	3,189,322	G→C	13.3%	H457Q (CAC→CAG)	PP_2799 ←	class III aminotransferase
RA	3,198,945	A→T	8.7%	intergenic (‑246/+31)	ethA ← / ← PP_2806	FAD‑containing monooxygenase EthA/TetR family transcriptional regulator
RA	3,198,949	A→T	8.1%	intergenic (‑250/+27)	ethA ← / ← PP_2806	FAD‑containing monooxygenase EthA/TetR family transcriptional regulator
RA	3,198,953	A→T	8.2%	intergenic (‑254/+23)	ethA ← / ← PP_2806	FAD‑containing monooxygenase EthA/TetR family transcriptional regulator
RA	3,209,603	G→A	7.0%	A262T (GCC→ACC)	PP_2813 →	BNR domain‑containing protein
RA	3,213,020	T→A	8.2%	M15K (ATG→AAG)	mexC →	multidrug RND transporter membrane fusion protein MexC
RA	3,213,031	T→A	7.1%	L19M (TTG→ATG)	mexC →	multidrug RND transporter membrane fusion protein MexC
RA	3,236,191	G→T	14.6%	G415C (GGT→TGT) ‡	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,236,193	T→A	12.3%	G415G (GGT→GGA) ‡	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,236,195	A→C	14.0%	Q416P (CAG→CCG)	PP_2834 →	D‑galactarate dehydratase/altronate dehydratase
RA	3,238,188	T→G	11.1%	L195R (CTG→CGG)	PP_2836 →	2‑keto‑3‑deoxyxylonate dehydratase
RA	3,238,190	T→A	11.1%	S196T (TCC→ACC) ‡	PP_2836 →	2‑keto‑3‑deoxyxylonate dehydratase
RA	3,238,192	C→A	11.8%	S196S (TCC→TCA) ‡	PP_2836 →	2‑keto‑3‑deoxyxylonate dehydratase
RA	3,240,243	G→A	7.0%	intergenic (+20/‑105)	PP_2837 → / → PP_2838	uronate transporter/hypothetical protein
RA	3,252,535	G→A	8.9%	intergenic (+22/+221)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,252,540	T→C	8.5%	intergenic (+27/+216)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,252,594	T→A	7.6%	intergenic (+81/+162)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,252,595	T→A	8.0%	intergenic (+82/+161)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,253,880	A→G	9.6%	V634A (GTG→GCG) ‡	PP_2852 ←	sulfatase domain‑containing protein
RA	3,253,881	C→T	9.0%	V634M (GTG→ATG) ‡	PP_2852 ←	sulfatase domain‑containing protein
RA	3,257,523	G→C	7.4%	A158G (GCC→GGC)	PP_2854 ←	hypothetical protein
RA	3,268,580	G→C	6.1%	Y292* (TAC→TAG)	PP_2867 ←	pyridine nucleotide‑disulphide oxidoreductase family protein
RA	3,268,583	G→C	6.3%	A291A (GCC→GCG)	PP_2867 ←	pyridine nucleotide‑disulphide oxidoreductase family protein
RA	3,276,380	G→T	7.1%	intergenic (+39/+8)	PP_2874 → / ← PP_2875	hypothetical protein/hypothetical protein
RA	3,276,383	A→C	7.4%	intergenic (+42/+5)	PP_2874 → / ← PP_2875	hypothetical protein/hypothetical protein
RA	3,280,602	Δ1 bp	5.2%	coding (71/564 nt)	PP_2880 ←	TetR family transcriptional regulator
RA	3,280,607:1	+A	5.1%	coding (66/564 nt)	PP_2880 ←	TetR family transcriptional regulator
RA	3,282,323	Δ1 bp	8.6%	coding (86/300 nt)	PP_2883 ←	hypothetical protein
RA	3,282,330	C→T	8.1%	E27K (GAG→AAG)	PP_2883 ←	hypothetical protein
RA	3,282,331	A→G	8.0%	L26L (CTT→CTC)	PP_2883 ←	hypothetical protein
RA	3,282,337:1	+C	7.1%	coding (72/300 nt)	PP_2883 ←	hypothetical protein
RA	3,285,003	G→A	7.1%	A302V (GCC→GTC)	PP_2887 ←	catalase‑like peroxidase
RA	3,285,852	A→T	5.6%	I19N (ATT→AAT)	PP_2887 ←	catalase‑like peroxidase
RA	3,286,493	T→G	13.2%	N154K (AAT→AAG)	PP_2888 →	ECF family RNA polymerase sigma factor PrtI
RA	3,286,496	C→A	13.1%	A155A (GCC→GCA)	PP_2888 →	ECF family RNA polymerase sigma factor PrtI
RA	3,303,940	C→T	6.4%	P178L (CCG→CTG)	cysS →	cysteine‑‑tRNA ligase
RA	3,304,806	A→G	7.9%	intergenic (+16/+16)	cysS → / ← PP_2906	cysteine‑‑tRNA ligase/sensor histidine kinase
RA	3,304,807	C→G	7.7%	intergenic (+17/+15)	cysS → / ← PP_2906	cysteine‑‑tRNA ligase/sensor histidine kinase
RA	3,304,808	C→T	7.7%	intergenic (+18/+14)	cysS → / ← PP_2906	cysteine‑‑tRNA ligase/sensor histidine kinase
RA	3,308,146	G→C	10.4%	D104H (GAC→CAC)	csiD →	carbon starvation induced protein
RA	3,312,732	T→A	11.1%	intergenic (+30/‑132)	PP_2912 → / → hemB	hypothetical protein/5‑aminolevulinate dehydratase
RA	3,313,868	C→A	14.7%	intergenic (+30/‑129)	hemB → / → proP	5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease
RA	3,313,871	T→G	14.8%	intergenic (+33/‑126)	hemB → / → proP	5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease
RA	3,315,627	A→C	9.3%	L192R (CTC→CGC)	PP_2915 ←	membrane protein
RA	3,322,007	C→G	10.0%	P301R (CCG→CGG)	PP_2921 →	hypothetical protein
RA	3,333,397	G→A	10.6%	P151L (CCG→CTG)	PP_2931 ←	hypothetical protein
RA	3,339,251	C→T	5.7%	intergenic (‑210/+33)	PP_2935 ← / ← ybiT	membrane protein/ABC‑F family ATPase
RA	3,344,629	G→A	6.5%	D181D (GAC→GAT)	PP_2941 ←	hypothetical protein
RA	3,368,464	G→A	8.7%	R576H (CGC→CAC)	PP_2964 →	transposase
RA	3,368,482	T→C	19.5%	V582A (GTG→GCG)	PP_2964 →	transposase
RA	3,380,579	A→G	5.8%	N70D (AAC→GAC)	tnpT‑I →	cointegrate resolution protein T
RA	3,380,583	T→A	5.8%	L71Q (CTG→CAG)	tnpT‑I →	cointegrate resolution protein T
RA	3,423,575	C→G	6.5%	P564A (CCA→GCA)	PP_3038 →	TraC domain‑containing protein
RA	3,424,932:1	+G	5.4%	intergenic (+477/‑35)	PP_3039 → / → PP_3040	hypothetical protein/holin
RA	3,424,935	T→A	5.5%	intergenic (+480/‑32)	PP_3039 → / → PP_3040	hypothetical protein/holin
RA	3,426,925	G→T	8.1%	E277D (GAG→GAT)	PP_3042 →	terminase large subunit
RA	3,430,392	G→C	6.2%	S189S (TCG→TCC)	PP_3045 →	ATP‑dependent protease ClpP
RA	3,436,589	C→A	6.1%	L161M (CTG→ATG)	gpI →	tail formation protein
RA	3,442,347	C→A	12.0%	L355M (CTG→ATG) ‡	PP_3062 →	tail length determination protein
RA	3,442,348	T→G	11.6%	L355R (CTG→CGG) ‡	PP_3062 →	tail length determination protein
RA	3,453,506	C→T	11.3%	intergenic (‑17/+96)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,453,523	A→G	6.5%	intergenic (‑34/+79)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,456,354	T→G	9.3%	E51A (GAG→GCG) ‡	eco ←	ecotin
RA	3,456,355	C→A	8.2%	E51* (GAG→TAG) ‡	eco ←	ecotin
RA	3,457,102	T→G	7.7%	E77A (GAG→GCG)	hbdH ←	3‑hydroxybutyrate dehydrogenase
RA	3,457,105	C→A	6.9%	R76L (CGC→CTC)	hbdH ←	3‑hydroxybutyrate dehydrogenase
RA	3,466,101	G→C	6.0%	noncoding (102/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,480,757	A→T	5.3%	W169R (TGG→AGG)	PP_3090 ←	OmpA domain‑containing protein
RA	3,485,238	G→T	6.0%	A243A (GCC→GCA)	PP_3091 ←	membrane protein
RA	3,489,983	G→T	6.0%	A484D (GCC→GAC)	clpV ←	protein ClpV1
RA	3,490,620	G→A	9.1%	L272L (CTG→TTG)	clpV ←	protein ClpV1
RA	3,493,695	A→C	10.3%	L184R (CTG→CGG) ‡	PP_3097 ←	hypothetical protein
RA	3,493,696	G→T	10.3%	L184M (CTG→ATG) ‡	PP_3097 ←	hypothetical protein
RA	3,507,790	C→A	12.9%	F32L (TTC→TTA)	PP_3105 →	membrane protein
RA	3,528,036	A→G	11.2%	S402G (AGC→GGC)	imuB →	DNA repair DNA linked protein
RA	3,528,039	C→T	10.2%	R403C (CGC→TGC)	imuB →	DNA repair DNA linked protein
RA	3,528,544	G→C	6.8%	R106R (CGG→CGC)	dnaEB →	error‑prone DNA polymerase
RA	3,528,547	G→C	6.8%	R107R (CGG→CGC)	dnaEB →	error‑prone DNA polymerase
RA	3,528,609	T→A	10.1%	L128Q (CTG→CAG)	dnaEB →	error‑prone DNA polymerase
RA	3,528,612	T→A	10.1%	L129Q (CTG→CAG)	dnaEB →	error‑prone DNA polymerase
RA	3,533,408	C→T	6.9%	L15F (CTC→TTC)	atoA →	3‑oxoacid CoA‑transferase subunit A
RA	3,533,413	A→G	6.8%	E16E (GAA→GAG)	atoA →	3‑oxoacid CoA‑transferase subunit A
RA	3,536,587	C→G	8.8%	A61G (GCC→GGC)	PP_3125 →	Cro/CI family transcriptional regulator
RA	3,542,361	A→G	9.2%	Y135Y (TAT→TAC)	galE ←	UDP‑glucose 4‑epimerase
RA	3,542,364	C→T	9.0%	P134P (CCG→CCA)	galE ←	UDP‑glucose 4‑epimerase
RA	3,571,717	Δ1 bp	12.8%	coding (703/867 nt)	yneJ →	LysR family DNA‑binding transcriptional regulator
RA	3,571,720:1	+G	13.5%	coding (706/867 nt)	yneJ →	LysR family DNA‑binding transcriptional regulator
RA	3,584,941	G→T	9.5%	intergenic (+45/‑90)	benC → / → benD	benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
RA	3,584,942	A→C	10.0%	intergenic (+46/‑89)	benC → / → benD	benzoate 1,2‑dioxygenase electron transfer component/1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
RA	3,590,225	G→A	10.8%	G235S (GGC→AGC)	nicP‑I →	porin‑like protein
RA	3,590,228	T→C	11.1%	F236L (TTT→CTT)	nicP‑I →	porin‑like protein
RA	3,591,619	T→A	7.8%	L258M (TTG→ATG) ‡	PP_3169 →	membrane protein
RA	3,591,620	T→A	7.8%	L258* (TTG→TAG) ‡	PP_3169 →	membrane protein
RA	3,591,768	G→T	9.0%	V307V (GTG→GTT)	PP_3169 →	membrane protein
RA	3,593,935	G→C	8.0%	A310P (GCG→CCG)	PP_3171 →	hypothetical protein
RA	3,593,940	G→C	7.6%	R311R (CGG→CGC)	PP_3171 →	hypothetical protein
RA	3,610,902	Δ1 bp	6.5%	coding (2825/3396 nt)	mcoA ←	Mn(II) copper oxidase A
RA	3,610,907:1	+A	9.7%	coding (2820/3396 nt)	mcoA ←	Mn(II) copper oxidase A
RA	3,612,162	A→T	10.1%	I522N (ATT→AAT)	mcoA ←	Mn(II) copper oxidase A
RA	3,624,901	C→T	11.7%	L210L (CTG→CTA) ‡	PP_3195 ←	hypothetical protein
RA	3,624,902	A→G	11.6%	L210P (CTG→CCG) ‡	PP_3195 ←	hypothetical protein
RA	3,630,365	T→C	9.2%	W315R (TGG→CGG) ‡	PP_3200 →	hypothetical protein
RA	3,630,366	G→A	9.2%	W315* (TGG→TAG) ‡	PP_3200 →	hypothetical protein
RA	3,638,699	T→G	9.6%	L218V (TTG→GTG)	PP_3205 →	fumarylacetoacetate hydrolase family protein
RA	3,638,703	C→A	9.1%	P219Q (CCG→CAG)	PP_3205 →	fumarylacetoacetate hydrolase family protein
RA	3,638,706	T→G	9.5%	L220R (CTG→CGG)	PP_3205 →	fumarylacetoacetate hydrolase family protein
RA	3,638,710	C→A	9.3%	H221Q (CAC→CAA)	PP_3205 →	fumarylacetoacetate hydrolase family protein
RA	3,639,903	C→G	8.3%	A291A (GCC→GCG)	PP_3206 →	hypothetical protein
RA	3,639,904	C→G	8.1%	R292G (CGC→GGC)	PP_3206 →	hypothetical protein
RA	3,644,991	C→T	10.6%	intergenic (‑43/+23)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,644,994	A→G	10.8%	intergenic (‑46/+20)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,645,945	A→T	6.7%	L32Q (CTG→CAG)	PP_3212 ←	Rieske 2Fe‑2S family protein
RA	3,645,948	A→T	7.9%	L31Q (CTG→CAG)	PP_3212 ←	Rieske 2Fe‑2S family protein
RA	3,659,949	C→G	6.4%	intergenic (‑41/+34)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,951	G→A	6.2%	intergenic (‑43/+32)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,952	T→C	6.5%	intergenic (‑44/+31)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,954	C→G	8.2%	intergenic (‑46/+29)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,680,780	C→G	7.6%	intergenic (+23/+21)	crtZ → / ← PP_3247	beta‑carotene hydroxylase/bile acid/Na+ symporter family transporter
RA	3,680,781	C→G	7.6%	intergenic (+24/+20)	crtZ → / ← PP_3247	beta‑carotene hydroxylase/bile acid/Na+ symporter family transporter
RA	3,686,477	A→C	16.1%	D281A (GAC→GCC)	PP_3251 →	hypothetical protein
RA	3,686,479	C→T	13.7%	L282L (CTG→TTG)	PP_3251 →	hypothetical protein
RA	3,686,484	A→G	13.5%	Q283Q (CAA→CAG)	PP_3251 →	hypothetical protein
RA	3,686,486	G→T	16.5%	G284V (GGC→GTC)	PP_3251 →	hypothetical protein
RA	3,701,700	G→A	6.6%	S29S (TCG→TCA)	PP_3267 →	Clp protease
RA	3,711,678	A→T	5.6%	V19D (GTC→GAC)	paaC ←	ring 1,2‑phenylacetyl‑CoA epoxidase subunit beta
RA	3,713,436	C→G	7.0%	S374T (AGT→ACT)	paaK ←	phenylacetate‑CoA ligase
RA	3,715,401	A→T	9.1%	D166E (GAT→GAA)	paaJ ←	3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase
RA	3,716,176	G→C	9.2%	T52T (ACC→ACG) ‡	paaI ←	hydroxyphenylacetyl‑CoA thioesterase
RA	3,716,177	G→C	9.1%	T52S (ACC→AGC) ‡	paaI ←	hydroxyphenylacetyl‑CoA thioesterase
RA	3,726,458	T→G	10.0%	F356L (TTT→TTG)	PP_3291 →	metallo‑beta‑lactamase family protein
RA	3,726,459	C→A	10.2%	Q357K (CAA→AAA)	PP_3291 →	metallo‑beta‑lactamase family protein
RA	3,741,995	G→A	14.5%	intergenic (‑20/+393)	PP_3305 ← / ← PP_3306	TerC family membrane protein/hypothetical protein
RA	3,742,002	A→T	14.3%	intergenic (‑27/+386)	PP_3305 ← / ← PP_3306	TerC family membrane protein/hypothetical protein
RA	3,742,003	A→T	12.7%	intergenic (‑28/+385)	PP_3305 ← / ← PP_3306	TerC family membrane protein/hypothetical protein
RA	3,742,010	T→C	12.2%	intergenic (‑35/+378)	PP_3305 ← / ← PP_3306	TerC family membrane protein/hypothetical protein
RA	3,762,985	A→T	10.7%	N62I (AAC→ATC)	PP_3326 →	hypothetical protein
RA	3,762,990	A→T	10.7%	I64F (ATC→TTC)	PP_3326 →	hypothetical protein
RA	3,763,532	A→C	5.7%	intergenic (+9/+1666)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,545	A→G	8.2%	intergenic (+22/+1653)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,547	G→C	8.2%	intergenic (+24/+1651)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,549	C→T	8.3%	intergenic (+26/+1649)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,768,318	C→A	11.3%	P97Q (CCG→CAG)	PP_5600 →	hypothetical protein
RA	3,774,290	C→G	9.4%	A317G (GCC→GGC)	PP_5743 →	TonB‑dependent receptor protein
RA	3,786,381	C→T	7.5%	G291S (GGC→AGC)	mhpT ←	3‑(3‑hydroxy‑phenyl)propionate transporter MhpT
RA	3,787,761	C→A	10.2%	S306I (AGC→ATC) ‡	PP_3350 ←	hypothetical protein
RA	3,787,762	T→G	10.3%	S306R (AGC→CGC) ‡	PP_3350 ←	hypothetical protein
RA	3,788,441	G→C	7.6%	Y79* (TAC→TAG)	PP_3350 ←	hypothetical protein
RA	3,788,444	G→C	6.5%	R78R (CGC→CGG)	PP_3350 ←	hypothetical protein
RA	3,793,712	G→T	5.5%	P285H (CCC→CAC)	PP_3355 ←	beta‑ketothiolase
RA	3,793,935	A→T	11.6%	L211M (TTG→ATG)	PP_3355 ←	beta‑ketothiolase
RA	3,793,940	A→T	13.1%	I209N (ATT→AAT)	PP_3355 ←	beta‑ketothiolase
RA	3,796,174	A→C	9.0%	L108R (CTG→CGG)	fcs ←	feruloyl‑CoA‑synthetase
RA	3,796,177	G→T	9.3%	P107Q (CCG→CAG)	fcs ←	feruloyl‑CoA‑synthetase
RA	3,811,899	G→A	7.8%	A60A (GCG→GCA)	PP_3368 →	MFS transporter
RA	3,811,902	T→C	7.8%	Y61Y (TAT→TAC)	PP_3368 →	MFS transporter
RA	3,812,195	C→G	12.4%	P159R (CCG→CGG)	PP_3368 →	MFS transporter
RA	3,812,702	A→G	16.7%	D328G (GAC→GGC)	PP_3368 →	MFS transporter
RA	3,812,705	T→A	17.0%	I329N (ATT→AAT)	PP_3368 →	MFS transporter
RA	3,812,708	C→T	17.1%	A330V (GCC→GTC)	PP_3368 →	MFS transporter
RA	3,853,162	T→A	18.9%	I169N (ATT→AAT)	alkB →	alpha‑ketoglutarate‑ and Fe(II)‑dependent dioxygenase
RA	3,853,809	C→T	7.2%	intergenic (+48/+34)	PP_3401 → / ← PP_3402	hypothetical protein/hypothetical protein
RA	3,865,939	Δ1 bp	9.8%	coding (983/1020 nt)	PP_3415 ←	LacI family transcriptional regulator
JC	3,866,735	Δ8 bp	6.0%	coding (180‑187/1020 nt)	PP_3415 ←	LacI family transcriptional regulator
RA	3,866,834	G→A	10.2%	R30C (CGC→TGC)	PP_3415 ←	LacI family transcriptional regulator
RA	3,866,973	C→A	21.0%	intergenic (‑52/‑155)	PP_3415 ← / → gnuK	LacI family transcriptional regulator/D‑gluconate kinase
RA	3,876,562	Δ1 bp	7.8%	coding (1010/1212 nt)	xcpS →	type II secretion pathway protein XcpS
RA	3,876,566:1	+A	8.0%	coding (1014/1212 nt)	xcpS →	type II secretion pathway protein XcpS
RA	3,880,419	C→G	9.2%	A737G (GCC→GGC)	mexF →	multidrug RND transporter MexF
RA	3,882,291:1	+G	6.2%	coding (906/1416 nt)	oprN →	multidrug RND transporter outer membrane protein OprN
RA	3,882,857	A→G	14.0%	intergenic (+56/‑169)	oprN → / → PP_3428	multidrug RND transporter outer membrane protein OprN/TPR repeat‑containing protein
RA	3,882,868	C→T	13.9%	intergenic (+67/‑158)	oprN → / → PP_3428	multidrug RND transporter outer membrane protein OprN/TPR repeat‑containing protein
RA	3,883,615	C→G	11.3%	A197G (GCC→GGC) ‡	PP_3428 →	TPR repeat‑containing protein
RA	3,883,616	C→G	11.3%	A197A (GCC→GCG) ‡	PP_3428 →	TPR repeat‑containing protein
RA	3,896,127	T→G	9.4%	Q221P (CAG→CCG)	PP_3439 ←	AraC family transcriptional regulator
RA	3,900,160	C→A	9.3%	P175Q (CCG→CAG)	PP_3443 →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	3,900,163	T→G	9.1%	L176R (CTG→CGG)	PP_3443 →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	3,900,169	T→C	7.6%	V178A (GTG→GCG)	PP_3443 →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	3,908,447	C→T	10.5%	L118L (CTG→TTG)	PP_3450 →	TPR repeat‑containing protein
RA	3,908,460	A→G	9.8%	N122S (AAC→AGC)	PP_3450 →	TPR repeat‑containing protein
RA	3,916,544	C→G	5.9%	A94A (GCC→GCG)	mexB →	multidrug resistance protein MexB
RA	3,920,314	A→G	15.3%	L499P (CTG→CCG)	acs ←	acyl‑CoA synthetase
RA	3,920,317	C→T	15.0%	R498Q (CGG→CAG)	acs ←	acyl‑CoA synthetase
RA	3,934,031	A→T	16.4%	C476S (TGC→AGC)	PP_3467 ←	sigma‑54 dependent transcriptional regulator
RA	3,934,036	A→T	14.1%	L474Q (CTG→CAG)	PP_3467 ←	sigma‑54 dependent transcriptional regulator
RA	3,943,054	G→A	5.4%	L295F (CTC→TTC)	PP_3478 ←	secretion protein
RA	3,958,227	A→T	9.1%	L734L (CTT→CTA) ‡	mnxG ←	manganese‑oxidizing multicopper oxidase
RA	3,958,228	A→T	9.1%	L734H (CTT→CAT) ‡	mnxG ←	manganese‑oxidizing multicopper oxidase
RA	3,960,435	C→A	5.7%	intergenic (‑7/‑322)	mnxG ← / → PP_3491	manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein
RA	3,960,659	T→A	10.1%	intergenic (‑231/‑98)	mnxG ← / → PP_3491	manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein
RA	3,960,661	G→A	10.6%	intergenic (‑233/‑96)	mnxG ← / → PP_3491	manganese‑oxidizing multicopper oxidase/enoly‑coenzyme A hydratase/isomerase family protein
RA	3,975,312	A→C	6.2%	V170G (GTG→GGG)	PP_3505 ←	hypothetical protein
RA	3,975,315	G→T	6.3%	P169H (CCC→CAC)	PP_3505 ←	hypothetical protein
RA	3,976,352	G→T	6.6%	A187D (GCC→GAC)	PP_3506 ←	magnesium chelatase subunit ChII
RA	3,980,198	T→A	6.6%	Q159H (CAA→CAT)	cobN ←	aerobic cobaltochelatase subunit CobN
RA	3,982,879	G→T	8.8%	G118G (GGG→GGT)	PP_3510 →	hypothetical protein
RA	3,982,882	T→A	7.2%	H119Q (CAT→CAA)	PP_3510 →	hypothetical protein
RA	3,982,885	A→C	8.4%	*120C (TGA→TGC)	PP_3510 →	hypothetical protein
RA	4,021,409	C→G	5.8%	*314S (TGA→TCA)	PP_3547 ←	NAD(P)‑binding oxidoreductase
RA	4,027,194	T→A	11.2%	D427V (GAC→GTC)	PP_3552 ←	two‑component system sensor histidine kinase
RA	4,030,468	C→A	6.0%	P29P (CCC→CCA)	PP_3554 →	acyl‑CoA dehydrogenase family protein
RA	4,033,085	A→C	7.2%	M227L (ATG→CTG)	PP_3555 →	transmembrane sensor
RA	4,033,545	G→C	9.3%	T401T (ACC→ACG) ‡	PP_3556 ←	membrane protein
RA	4,033,546	G→C	9.2%	T401S (ACC→AGC) ‡	PP_3556 ←	membrane protein
RA	4,038,610	C→G	9.8%	A122G (GCC→GGC) ‡	PP_3559 →	glycine betaine ABC transporter permease
RA	4,038,611	C→G	9.8%	A122A (GCC→GCG) ‡	PP_3559 →	glycine betaine ABC transporter permease
RA	4,044,721	C→G	13.3%	G344A (GGG→GCG) ‡	PP_3566 ←	MFS transporter
RA	4,044,722	C→G	13.3%	G344R (GGG→CGG) ‡	PP_3566 ←	MFS transporter
RA	4,049,646	A→T	6.7%	K718M (AAG→ATG)	quiA →	quinate dehydrogenase
RA	4,049,951	A→G	17.5%	intergenic (+40/‑61)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,954	C→G	18.5%	intergenic (+43/‑58)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,957	C→T	18.4%	intergenic (+46/‑55)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,061,434	C→A	8.7%	L107M (CTG→ATG) ‡	PP_3579 →	membrane protein
RA	4,061,435	T→G	7.7%	L107R (CTG→CGG) ‡	PP_3579 →	membrane protein
RA	4,073,161:1	+G	7.1%	coding (346/1308 nt)	mdtA ←	multidrug transporter membrane fusion protein
RA	4,073,163	T→G	7.2%	K115T (AAG→ACG)	mdtA ←	multidrug transporter membrane fusion protein
RA	4,073,165	G→C	7.2%	V114V (GTC→GTG) ‡	mdtA ←	multidrug transporter membrane fusion protein
RA	4,073,167	C→A	7.4%	V114F (GTC→TTC) ‡	mdtA ←	multidrug transporter membrane fusion protein
RA	4,073,169	Δ1 bp	7.3%	coding (338/1308 nt)	mdtA ←	multidrug transporter membrane fusion protein
RA	4,080,963	A→T	10.2%	intergenic (‑143/+20)	amaC ← / ← dpkA	D‑lysine aminotransferase/delta 1‑piperideine‑2‑carboxylate reductase
RA	4,080,964	A→T	10.2%	intergenic (‑144/+19)	amaC ← / ← dpkA	D‑lysine aminotransferase/delta 1‑piperideine‑2‑carboxylate reductase
RA	4,090,100	C→G	11.3%	S36C (TCC→TGC) ‡	gudP →	glucarate transporter
RA	4,090,101	C→G	11.3%	S36S (TCC→TCG) ‡	gudP →	glucarate transporter
RA	4,128,188	C→G	9.3%	A171A (GCC→GCG)	htrG →	signal transduction protein
RA	4,128,189	C→G	7.8%	R172G (CGC→GGC)	htrG →	signal transduction protein
RA	4,132,635	C→T	5.4%	L190L (CTG→CTA)	PP_3636 ←	sulfonate ABC transporter substrate‑binding protein
RA	4,134,023	C→G	5.0%	A351P (GCA→CCA)	PP_3638 ←	acyl‑CoA dehydrogenase
RA	4,151,982	A→T	9.3%	intergenic (+128/+23)	PP_3655 → / ← PP_3656	cytosine/purine/uracil/thiamine/allantoin permease family protein/aromatic compound‑specific porin
RA	4,151,986	Δ1 bp	9.5%	intergenic (+132/+19)	PP_3655 → / ← PP_3656	cytosine/purine/uracil/thiamine/allantoin permease family protein/aromatic compound‑specific porin
RA	4,160,676	T→C	6.1%	*458R (TGA→CGA)	PP_3662 →	hypothetical protein
RA	4,160,705	G→C	9.7%	intergenic (+27/+94)	PP_3662 → / ← PP_3663	hypothetical protein/GGDEF domain‑containing protein
RA	4,160,706	G→C	9.7%	intergenic (+28/+93)	PP_3662 → / ← PP_3663	hypothetical protein/GGDEF domain‑containing protein
RA	4,162,143	T→C	12.8%	intergenic (‑43/+34)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,147	T→A	13.7%	intergenic (‑47/+30)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,148	T→A	14.0%	intergenic (‑48/+29)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,152	G→A	15.2%	intergenic (‑52/+25)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,163,250	T→A	6.1%	R86W (AGG→TGG)	pssA ←	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,170,489	T→G	8.2%	L56R (CTG→CGG)	PP_3669 →	LysR family transcriptional regulator
RA	4,170,494	C→A	9.5%	R58S (CGC→AGC)	PP_3669 →	LysR family transcriptional regulator
RA	4,185,604	C→G	16.6%	L446L (CTC→CTG)	PP_3681 →	putative Helicase
RA	4,188,015:1	+A	16.0%	intergenic (+76/‑134)	PP_3683 → / → PP_3684	hypothetical protein/hypothetical protein
RA	4,188,018	Δ1 bp	16.0%	intergenic (+79/‑131)	PP_3683 → / → PP_3684	hypothetical protein/hypothetical protein
RA	4,208,705	A→T	7.3%	Q205L (CAG→CTG)	PP_3692 →	hypothetical protein
RA	4,220,867	G→A	5.6%	Q463Q (CAG→CAA)	PP_3699 →	hypothetical protein
RA	4,224,539	G→A	6.5%	intergenic (‑607/+214)	PP_3703 ← / ← PP_3704	hypothetical protein/hypothetical protein
RA	4,224,545	C→A	7.0%	intergenic (‑613/+208)	PP_3703 ← / ← PP_3704	hypothetical protein/hypothetical protein
RA	4,224,546	T→G	7.3%	intergenic (‑614/+207)	PP_3703 ← / ← PP_3704	hypothetical protein/hypothetical protein
RA	4,231,527	C→T	8.7%	V86V (GTG→GTA)	PP_3709 ←	hypothetical protein
RA	4,239,364	C→G	7.4%	intergenic (+63/+70)	catR → / ← PP_3717	HTH‑type transcriptional regulator/LuxR family transcriptional regulator
RA	4,239,367	C→G	7.4%	intergenic (+66/+67)	catR → / ← PP_3717	HTH‑type transcriptional regulator/LuxR family transcriptional regulator
RA	4,244,402	G→C	15.2%	S221R (AGC→AGG)	aruH ←	arginine‑‑pyruvate transaminase AruH
RA	4,246,229	C→G	9.3%	M30I (ATG→ATC)	alr ←	alanine racemase
RA	4,246,232	C→G	6.9%	S29S (TCG→TCC)	alr ←	alanine racemase
RA	4,248,398	C→T	9.0%	R558H (CGC→CAC)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,403	C→A	7.5%	Q556H (CAG→CAT)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,553	A→G	9.9%	S506S (AGT→AGC)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,556	C→G	8.6%	L505L (CTG→CTC)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,559	C→T	8.5%	V504V (GTG→GTA)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,947	C→G	6.1%	G375A (GGC→GCC)	PP_3724 ←	acyl‑CoA synthetase
RA	4,278,746	G→A	12.8%	R111Q (CGG→CAG)	PP_3749 →	hypothetical protein
RA	4,278,748	C→A	12.4%	L112I (CTC→ATC) ‡	PP_3749 →	hypothetical protein
RA	4,278,749	T→G	12.3%	L112R (CTC→CGC) ‡	PP_3749 →	hypothetical protein
RA	4,278,751	T→C	12.2%	*113R (TGA→CGA)	PP_3749 →	hypothetical protein
RA	4,281,630	A→T	6.3%	intergenic (‑163/+555)	PP_3751 ← / ← PP_3753	cyanate transporter/AraC family transcriptional regulator
RA	4,284,687	C→T	6.3%	N16N (AAC→AAT)	hbd →	3‑hydroxybutyryl‑CoA dehydrogenase
RA	4,284,689	G→C	6.4%	G17A (GGC→GCC)	hbd →	3‑hydroxybutyryl‑CoA dehydrogenase
RA	4,284,691	A→G	6.3%	I18V (ATT→GTT)	hbd →	3‑hydroxybutyryl‑CoA dehydrogenase
RA	4,288,998	Δ1 bp	5.7%	coding (169/822 nt)	PP_3760 ←	methyltransferase
RA	4,289,002:1	+G	5.7%	coding (165/822 nt)	PP_3760 ←	methyltransferase
RA	4,296,910	A→G	8.9%	intergenic (+33/‑65)	gloA → / → PP_3767	lactoylglutathione lyase/hypothetical protein
RA	4,296,911	C→T	8.9%	intergenic (+34/‑64)	gloA → / → PP_3767	lactoylglutathione lyase/hypothetical protein
RA	4,298,936	T→A	9.7%	intergenic (+47/+44)	PP_3770 → / ← PP_3771	hypothetical protein/hypothetical protein
RA	4,301,102	A→G	7.4%	T75A (ACG→GCG)	PP_3774 →	hypothetical protein
RA	4,301,115	C→T	8.8%	A79V (GCC→GTC)	PP_3774 →	hypothetical protein
RA	4,311,358	T→A	20.0%	F12I (TTT→ATT) ‡	PP_3784 →	hypothetical protein
RA	4,311,359	T→A	20.2%	F12Y (TTT→TAT) ‡	PP_3784 →	hypothetical protein
RA	4,315,011	C→A	9.9%	S390Y (TCC→TAC)	aspC →	aminotransferase
RA	4,315,014	A→T	9.8%	N391I (AAT→ATT)	aspC →	aminotransferase
RA	4,315,017	T→G	10.0%	V392G (GTA→GGA)	aspC →	aminotransferase
RA	4,316,057	A→G	8.3%	P32P (CCA→CCG)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,316,066	A→C	16.7%	A35A (GCA→GCC)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,316,069	G→T	16.0%	A36A (GCG→GCT)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,316,702	C→T	10.0%	H247H (CAC→CAT)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,316,707	T→A	11.3%	V249D (GTC→GAC)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,316,712	A→G	11.4%	M251V (ATG→GTG)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,327,296	A→T	10.8%	N74Y (AAC→TAC) ‡	PP_3797 →	membrane protein
RA	4,327,297	A→T	9.6%	N74I (AAC→ATC) ‡	PP_3797 →	membrane protein
RA	4,338,437	T→A	7.6%	intergenic (+13/+129)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,447	T→C	7.0%	intergenic (+23/+119)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,448	G→A	7.3%	intergenic (+24/+118)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,537	A→T	6.6%	intergenic (+113/+29)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,538	A→T	6.6%	intergenic (+114/+28)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,342,600	C→A	12.4%	L89M (CTG→ATG) ‡	PP_3816 →	polyamine ABC transporter permease
RA	4,342,601	T→G	10.0%	L89R (CTG→CGG) ‡	PP_3816 →	polyamine ABC transporter permease
RA	4,348,162	T→G	23.9%	E173A (GAG→GCG) ‡	PP_3820 ←	group II intron‑encoding maturase
RA	4,348,163	C→A	24.3%	E173* (GAG→TAG) ‡	PP_3820 ←	group II intron‑encoding maturase
RA	4,348,749	A→G	45.1%	intergenic (‑70/+404)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,355,090	Δ1 bp	13.0%	coding (246/681 nt)	modB →	molybdate ABC transporter permease ModB
RA	4,355,094:1	+C	13.4%	coding (250/681 nt)	modB →	molybdate ABC transporter permease ModB
RA	4,357,790	T→C	8.4%	intergenic (+92/‑162)	PP_3831 → / → PP_3832	hypothetical protein/CsrA‑like carbon storage regulator
RA	4,357,791	G→A	8.4%	intergenic (+93/‑161)	PP_3831 → / → PP_3832	hypothetical protein/CsrA‑like carbon storage regulator
RA	4,375,367	G→T	7.0%	V71V (GTC→GTA)	PP_5637 ←	hypothetical protein
RA	4,375,486	C→A	9.5%	A32S (GCG→TCG)	PP_5637 ←	hypothetical protein
RA	4,375,488	A→T	10.0%	V31D (GTC→GAC)	PP_5637 ←	hypothetical protein
RA	4,375,490	T→G	10.0%	R30R (CGA→CGC)	PP_5637 ←	hypothetical protein
RA	4,377,518	C→T	9.3%	G33D (GGC→GAC)	PP_3852 ←	BNR domain‑containing protein
RA	4,383,558	G→C	6.9%	T114S (ACT→AGT)	PP_3858 ←	tail fiber protein
RA	4,399,561	G→A	7.0%	L125F (CTC→TTC)	PP_3878 ←	minor capsid protein C
RA	4,399,566	A→T	6.9%	I123N (ATT→AAT)	PP_3878 ←	minor capsid protein C
RA	4,442,672	C→G	12.6%	intergenic (‑98/+40)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,442,673	C→G	10.9%	intergenic (‑99/+39)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,450,173	C→G	5.8%	A68G (GCC→GGC)	nicA →	nicotinate dehydrogenase subunit A
RA	4,458,791	A→T	8.3%	intergenic (+39/‑229)	pcaJ → / → trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
RA	4,458,794	C→T	8.0%	intergenic (+42/‑226)	pcaJ → / → trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
RA	4,458,795	A→G	8.0%	intergenic (+43/‑225)	pcaJ → / → trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
RA	4,458,798	A→T	7.2%	intergenic (+46/‑222)	pcaJ → / → trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
RA	4,463,997	A→T	8.1%	*139C (TGA→TGT)	PP_3956 →	hypothetical protein
RA	4,464,000	G→C	8.3%	intergenic (+3/+25)	PP_3956 → / ← betT‑III	hypothetical protein/choline/carnitine/betaine transporter BetTC
RA	4,464,003	A→T	8.2%	intergenic (+6/+22)	PP_3956 → / ← betT‑III	hypothetical protein/choline/carnitine/betaine transporter BetTC
RA	4,471,732	T→A	7.8%	intergenic (‑499/‑395)	PP_3961 ← / → PP_3962	transporter/hypothetical protein
RA	4,475,136	C→G	8.8%	P148P (CCG→CCC)	PP_3964 ←	transposase
RA	4,478,916	A→T	10.0%	T75S (ACC→TCC)	ybdR →	Zn‑dependent oxidoreductase
RA	4,479,221	G→C	8.3%	W176C (TGG→TGC)	ybdR →	Zn‑dependent oxidoreductase
RA	4,484,768	A→T	10.5%	intergenic (+368/‑101)	PP_3976 → / → PP_3977	isochorismatase family hydrolase/hypothetical protein
RA	4,484,771	A→T	10.5%	intergenic (+371/‑98)	PP_3976 → / → PP_3977	isochorismatase family hydrolase/hypothetical protein
RA	4,486,259	G→T	9.2%	A29A (GCG→GCT)	PP_3978 →	hypothetical protein
RA	4,486,260	A→C	7.5%	S30R (AGC→CGC)	PP_3978 →	hypothetical protein
RA	4,497,350	T→C	10.5%	E215G (GAA→GGA)	PP_5651 ←	hypothetical protein
RA	4,512,506	C→A	10.9%	G9V (GGT→GTT)	lolA ←	outer membrane lipoprotein carrier protein
RA	4,512,509	T→G	10.6%	N8T (AAC→ACC)	lolA ←	outer membrane lipoprotein carrier protein
RA	4,521,849	G→A	7.7%	intergenic (‑68/‑347)	icd ← / → idh	NADP(+)‑specific isocitrate dehydrogenase/isocitrate dehydrogenase
RA	4,524,526	T→C	6.2%	intergenic (+105/‑88)	idh → / → PP_4013	isocitrate dehydrogenase/MutT/nudix family protein
RA	4,528,397	T→A	15.8%	intergenic (+28/‑48)	purB → / → PP_4017	adenylosuccinate lyase/hypothetical protein
RA	4,530,053	T→C	6.5%	intergenic (+15/‑153)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,530,069	T→A	18.0%	intergenic (+31/‑137)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,530,070	T→A	18.0%	intergenic (+32/‑136)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,534,041	A→T	9.7%	Q89L (CAG→CTG)	cpo →	non‑heme chloroperoxidase
RA	4,545,350	G→C	8.5%	A167G (GCC→GGC)	hyuC ←	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
RA	4,545,353	T→A	8.6%	D166V (GAT→GTT)	hyuC ←	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
RA	4,545,353:1	+G	8.6%	coding (497/1284 nt)	hyuC ←	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
RA	4,545,358	C→A	8.5%	K164N (AAG→AAT)	hyuC ←	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
RA	4,545,360	Δ1 bp	8.1%	coding (490/1284 nt)	hyuC ←	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
RA	4,545,362	G→C	8.0%	A163G (GCC→GGC)	hyuC ←	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
RA	4,554,034	C→T	5.2%	L312L (CTG→CTA)	PP_4041 ←	glycoside hydrolase
RA	4,561,287	G→C	6.8%	I102M (ATC→ATG)	PP_4048 ←	hypothetical protein
RA	4,564,768	C→T	9.7%	intergenic (‑864/‑34)	vgrG‑III ← / → glgA	type VI secretion system protein/glycogen synthase
RA	4,564,769	A→G	9.9%	intergenic (‑865/‑33)	vgrG‑III ← / → glgA	type VI secretion system protein/glycogen synthase
RA	4,573,716	T→C	6.7%	L115P (CTG→CCG)	glgX →	glycogen debranching enzyme
RA	4,589,941	G→A	8.9%	A193T (GCG→ACG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,589,948	T→C	8.9%	V195A (GTG→GCG)	mccB →	methylcrotonyl‑CoA carboxylase biotin‑containing subunit beta
RA	4,598,544	C→G	6.6%	A437A (GCG→GCC)	PP_4071 ←	membrane protein
RA	4,598,547	C→G	6.8%	K436N (AAG→AAC)	PP_4071 ←	membrane protein
RA	4,610,342	C→G	8.2%	I261M (ATC→ATG)	PP_4081 →	type IV/VI secretion system protein
RA	4,610,345	C→G	8.2%	A262A (GCC→GCG)	PP_4081 →	type IV/VI secretion system protein
RA	4,614,851	G→A	7.8%	E392E (GAG→GAA)	PP_4085 →	rhs family protein
RA	4,614,854	C→A	7.7%	D393E (GAC→GAA)	PP_4085 →	rhs family protein
RA	4,638,919	T→A	5.3%	L530Q (CTG→CAG)	PP_4103 →	low‑affinity inorganic phosphate transporter
RA	4,638,924	T→A	5.3%	W532R (TGG→AGG)	PP_4103 →	low‑affinity inorganic phosphate transporter
RA	4,647,896	T→G	5.8%	D430A (GAC→GCC) ‡	PP_4112 ←	sulfate transporter
RA	4,647,897	C→A	6.4%	D430Y (GAC→TAC) ‡	PP_4112 ←	sulfate transporter
RA	4,666,358	G→C	5.8%	S26S (TCG→TCC)	nuoL →	NADH‑quinone oxidoreductase subunit L
RA	4,668,461	G→A	5.5%	G96D (GGC→GAC)	nuoM →	NADH‑quinone oxidoreductase subunit M
RA	4,693,502	T→C	5.7%	V444A (GTG→GCG)	PP_4154 →	class 3 aminotransferase
RA	4,703,552	A→T	5.4%	L553H (CTT→CAT)	kdpA ←	potassium‑transporting ATPase subunit A
RA	4,705,448	T→C	17.0%	intergenic (‑140/+37)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,449	C→T	15.6%	intergenic (‑141/+36)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,459	T→A	31.3%	intergenic (‑151/+26)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,460	T→A	31.2%	intergenic (‑152/+25)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,470	A→G	19.6%	intergenic (‑162/+15)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,471	G→A	19.2%	intergenic (‑163/+14)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,710,768	T→C	6.9%	N274D (AAC→GAC)	gpsA ←	glycerol‑3‑phosphate dehydrogenase
RA	4,710,769	G→A	8.0%	V273V (GTC→GTT)	gpsA ←	glycerol‑3‑phosphate dehydrogenase
RA	4,730,172	T→C	9.1%	S440G (AGT→GGT)	lpdG ←	dihydrolipoyl dehydrogenase
RA	4,730,173	G→A	9.6%	T439T (ACC→ACT)	lpdG ←	dihydrolipoyl dehydrogenase
RA	4,731,726	T→C	6.1%	N361D (AAT→GAT)	sucB ←	2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
RA	4,731,727	G→A	6.0%	I360I (ATC→ATT)	sucB ←	2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
RA	4,740,841	T→G	20.7%	intergenic (+32/+720)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,842	C→A	20.1%	intergenic (+33/+719)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,273:1	+C	71.4%	intergenic (+464/+288)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,274	A→C	28.5%	intergenic (+465/+287)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,275	A→G	71.4%	intergenic (+466/+286)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,277	C→T	100%	intergenic (+468/+284)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,280	C→T	100%	intergenic (+471/+281)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,283	C→G	100%	intergenic (+474/+278)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,285	2 bp→CT	100%	intergenic (+476/+275)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,298:1	+T	50.0%	intergenic (+489/+263)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,299	C→T	50.0%	intergenic (+490/+262)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,301	A→C	49.8%	intergenic (+492/+260)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,302	A→G	49.1%	intergenic (+493/+259)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,304	C→G	50.0%	intergenic (+495/+257)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,305	A→C	50.0%	intergenic (+496/+256)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,744,652	G→T	10.0%	G73G (GGC→GGA)	PP_4198 ←	OmpA family protein
RA	4,754,404	T→G	7.2%	V260G (GTG→GGG)	pvdR →	ABC transporter permease
RA	4,754,409	C→A	8.7%	Q262K (CAG→AAG) ‡	pvdR →	ABC transporter permease
RA	4,754,410	A→C	8.3%	Q262P (CAG→CCG) ‡	pvdR →	ABC transporter permease
RA	4,769,888	C→G	8.2%	V3142L (GTT→CTT)	pvdD ←	non‑ribosomal peptide synthetase
RA	4,769,889	C→G	8.2%	K3141N (AAG→AAC)	pvdD ←	non‑ribosomal peptide synthetase
RA	4,779,856	A→G	8.7%	N2501N (AAT→AAC)	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,780,166	A→G	10.4%	V2398A (GTG→GCG) ‡	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,780,167	C→T	10.4%	V2398M (GTG→ATG) ‡	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,783,595	C→A	5.3%	W1255L (TGG→TTG)	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,783,598	T→G	5.3%	Q1254P (CAA→CCA)	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,783,733	A→G	7.1%	L1209P (CTG→CCG)	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,783,736	C→T	8.6%	R1208Q (CGG→CAG)	pvdJ ←	non‑ribosomal peptide synthetase
RA	4,793,912	C→T	6.9%	intergenic (‑28/+128)	pvdI ← / ← PP_4222	non‑ribosomal peptide synthetase/protein SyrP
RA	4,796,649	A→G	14.3%	intergenic (‑162/+56)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,657	C→T	18.0%	intergenic (‑170/+48)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,659	G→C	17.8%	intergenic (‑172/+46)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,662	G→C	16.9%	intergenic (‑175/+43)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,664	A→G	17.2%	intergenic (‑177/+41)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,672	C→T	18.4%	intergenic (‑185/+33)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,798,241	G→C	7.8%	A156G (GCC→GGC)	qseB ←	two‑component system DNA‑binding transcriptional activator QseB
RA	4,803,225	T→G	6.5%	N45T (AAC→ACC)	PP_4231 ←	xanthine dehydrogenase accessory factor
RA	4,803,227	C→G	5.5%	V44V (GTG→GTC) ‡	PP_4231 ←	xanthine dehydrogenase accessory factor
RA	4,803,229	C→A	5.6%	V44L (GTG→TTG) ‡	PP_4231 ←	xanthine dehydrogenase accessory factor
RA	4,803,381	G→C	6.7%	A398G (GCC→GGC)	PP_4232 ←	cytochrome c family protein
RA	4,822,151	C→G	6.3%	W3028C (TGG→TGC) ‡	pvdL ←	non‑ribosomal peptide synthetase
RA	4,822,152	C→G	6.3%	W3028S (TGG→TCG) ‡	pvdL ←	non‑ribosomal peptide synthetase
RA	4,823,390	C→A	6.0%	L2615F (TTG→TTT)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,830,735	T→A	13.1%	D167V (GAC→GTC)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,842,941	Δ1 bp	25.8%	intergenic (+40/‑257)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,842,949:1	+G	29.1%	intergenic (+48/‑249)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,851,736	T→A	8.6%	intergenic (+83/+36)	apt → / ← recR	adenine phosphoribosyltransferase/recombination protein RecR
RA	4,851,737	T→A	8.7%	intergenic (+84/+35)	apt → / ← recR	adenine phosphoribosyltransferase/recombination protein RecR
RA	4,852,981	A→G	5.5%	L9P (CTG→CCG)	ybaB ←	nucleoid‑associated broad specificity regulator
RA	4,857,969	A→C	9.7%	T4T (ACT→ACG) ‡	PP_4272 ←	membrane protein
RA	4,857,970	G→T	11.0%	T4N (ACT→AAT) ‡	PP_4272 ←	membrane protein
RA	4,858,086	G→C	6.0%	G31A (GGG→GCG)	PP_4273 →	MerR family transcriptional regulator
RA	4,858,089	G→C	6.0%	R32P (CGC→CCC)	PP_4273 →	MerR family transcriptional regulator
RA	4,860,854	G→T	6.4%	L81M (CTG→ATG)	ligA ←	DNA ligase
RA	4,860,858	G→C	5.1%	L79L (CTC→CTG)	ligA ←	DNA ligase
RA	4,876,537	C→T	7.5%	intergenic (+330/+107)	PP_4284 → / ← pucM	transporter/5‑hydroxyisourate hydrolase
RA	4,884,419	A→T	8.1%	intergenic (+40/+89)	PP_4293 → / ← yedI	hypothetical protein/inner membrane protein
RA	4,884,420	A→T	7.9%	intergenic (+41/+88)	PP_4293 → / ← yedI	hypothetical protein/inner membrane protein
RA	4,895,944	C→G	8.9%	V118V (GTC→GTG)	PP_4304 →	VIC family cation transporter
RA	4,895,946	T→C	7.9%	I119T (ATC→ACC)	PP_4304 →	VIC family cation transporter
RA	4,896,422	C→T	6.3%	intergenic (+10/‑198)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,900,083	G→T	7.4%	*146L (TGA→TTA)	PP_4308 →	AsnC family transcriptional regulator
RA	4,900,096	G→A	9.8%	intergenic (+12/‑486)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,110	A→G	23.6%	intergenic (+26/‑472)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,114	G→A	24.1%	intergenic (+30/‑468)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,115	T→C	24.1%	intergenic (+31/‑467)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,119	C→T	24.2%	intergenic (+35/‑463)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,133	T→C	7.8%	intergenic (+49/‑449)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,902,716	G→A	5.9%	V196M (GTG→ATG) ‡	PP_4310 →	hydantoin racemase
RA	4,902,717	T→C	6.9%	V196A (GTG→GCG) ‡	PP_4310 →	hydantoin racemase
RA	4,906,508	A→T	7.7%	L112Q (CTG→CAG)	PP_4315 ←	epimerase
RA	4,906,511	A→T	7.6%	L111Q (CTG→CAG)	PP_4315 ←	epimerase
RA	4,908,340:2	+A	17.4%	intergenic (‑271/‑11)	PP_4317 ← / → PP_4318	hypothetical protein/transposase
RA	4,908,342	G→T	17.4%	intergenic (‑273/‑9)	PP_4317 ← / → PP_4318	hypothetical protein/transposase
RA	4,908,345	A→G	17.4%	intergenic (‑276/‑6)	PP_4317 ← / → PP_4318	hypothetical protein/transposase
RA	4,909,956	Δ1 bp	6.2%	intergenic (+304/+175)	PP_4318 → / ← PP_4319	transposase/hypothetical protein
RA	4,909,966	C→G	7.7%	intergenic (+314/+165)	PP_4318 → / ← PP_4319	transposase/hypothetical protein
RA	4,909,967	C→G	7.7%	intergenic (+315/+164)	PP_4318 → / ← PP_4319	transposase/hypothetical protein
RA	4,918,010	G→A	8.5%	V122I (GTC→ATC) ‡	PP_4328 →	hypothetical protein
RA	4,918,011	T→C	9.8%	V122A (GTC→GCC) ‡	PP_4328 →	hypothetical protein
RA	4,931,240	A→G	10.5%	S59P (TCC→CCC)	cheY ←	two‑component system response regulator
RA	4,931,245	C→T	10.3%	G57D (GGC→GAC)	cheY ←	two‑component system response regulator
RA	4,936,109	T→C	9.6%	I176V (ATC→GTC)	flhA ←	flagellar export pore protein
RA	4,945,292	G→A	8.2%	intergenic (+607/+191)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,310	A→G	8.7%	intergenic (+625/+173)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,325	C→G	8.8%	intergenic (+640/+158)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,327	C→G	8.8%	intergenic (+642/+156)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,329	T→C	8.8%	intergenic (+644/+154)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,331	C→T	8.9%	intergenic (+646/+152)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,332	A→G	8.9%	intergenic (+647/+151)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,333	C→T	9.1%	intergenic (+648/+150)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,342	T→C	8.2%	intergenic (+657/+141)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,945,346	C→T	8.0%	intergenic (+661/+137)	PP_5673 → / ← flhB	D‑alanine‑‑D‑alanine ligase/flagellin export apparatus substrate specificity protein
RA	4,951,017	T→G	11.3%	intergenic (‑122/+35)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,951,018	C→A	10.4%	intergenic (‑123/+34)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,958,639	T→G	9.4%	M36L (ATG→CTG)	fliG ←	flagellar motor switch protein
RA	4,958,644	C→T	10.5%	R34Q (CGG→CAG)	fliG ←	flagellar motor switch protein
RA	4,958,647	A→G	10.6%	L33P (CTG→CCG)	fliG ←	flagellar motor switch protein
RA	4,958,652	C→A	10.5%	Q31H (CAG→CAT)	fliG ←	flagellar motor switch protein
RA	4,970,038	T→G	10.2%	T84P (ACT→CCT)	fliC ←	flagellin
RA	4,970,049	C→A	10.5%	G80V (GGC→GTC)	fliC ←	flagellin
RA	4,974,081	T→A	7.9%	K523M (AAG→ATG) ‡	flgK ←	flagellar hook‑associated protein FlgK
RA	4,974,082	T→A	8.2%	K523* (AAG→TAG) ‡	flgK ←	flagellar hook‑associated protein FlgK
RA	4,980,399	T→G	5.2%	intergenic (‑145/+16)	flgF ← / ← PP_4387	flagellar basal‑body rod protein FlgF/hypothetical protein
RA	4,980,637	T→A	12.7%	intergenic (‑31/+40)	PP_4387 ← / ← flgE	hypothetical protein/flagellar hook protein FlgE
RA	4,980,638	T→A	12.7%	intergenic (‑32/+39)	PP_4387 ← / ← flgE	hypothetical protein/flagellar hook protein FlgE
RA	4,980,639	T→A	12.7%	intergenic (‑33/+38)	PP_4387 ← / ← flgE	hypothetical protein/flagellar hook protein FlgE
RA	4,993,162	C→G	11.0%	V357V (GTC→GTG)	bkdAA →	branched‑chain alpha‑keto acid dehydrogenase complex subunit alpha
RA	4,997,649	C→A	8.0%	R167L (CGG→CTG)	PP_4405 ←	sensory box protein
RA	4,997,652	T→G	7.8%	Q166P (CAG→CCG)	PP_4405 ←	sensory box protein
RA	4,998,219	G→T	9.5%	intergenic (‑71/‑145)	PP_4405 ← / → PP_4406	sensory box protein/hypothetical protein
RA	4,998,988	G→A	7.9%	intergenic (+97/‑208)	PP_4406 → / → PP_4407	hypothetical protein/gamma‑aminobutyrate transporter
RA	5,002,722	C→A	7.4%	P153P (CCC→CCA)	PP_4409 →	site‑specific recombinase
RA	5,013,331	T→C	16.4%	V35A (GTG→GCG)	PP_5678 →	hypothetical protein
RA	5,013,335	G→C	15.3%	L36L (CTG→CTC)	PP_5678 →	hypothetical protein
RA	5,013,339	G→A	12.5%	A38T (GCG→ACG)	PP_5678 →	hypothetical protein
RA	5,015,960	A→T	10.8%	intergenic (‑175/+59)	PP_5679 ← / ← PP_4421	hypothetical protein/aminotransferase
RA	5,015,961	A→T	10.5%	intergenic (‑176/+58)	PP_5679 ← / ← PP_4421	hypothetical protein/aminotransferase
RA	5,029,037	C→T	9.3%	intergenic (+66/‑373)	PP_4432 → / → PP_4433	Xaa‑Pro aminopeptidase/amino acid MFS transporter
RA	5,029,042	A→G	12.9%	intergenic (+71/‑368)	PP_4432 → / → PP_4433	Xaa‑Pro aminopeptidase/amino acid MFS transporter
RA	5,030,796	A→G	18.5%	intergenic (+34/‑461)	PP_4433 → / → dadA‑I	amino acid MFS transporter/D‑amino acid dehydrogenase small subunit
RA	5,030,799	C→T	18.4%	intergenic (+37/‑458)	PP_4433 → / → dadA‑I	amino acid MFS transporter/D‑amino acid dehydrogenase small subunit
RA	5,039,903	C→A	7.7%	E217* (GAG→TAG)	PP_4446 ←	group II intron‑encoding maturase
RA	5,041,297	T→A	8.9%	intergenic (+227/‑435)	PP_5680 → / → PP_4447	Cro/CI family transcriptional regulator/hypothetical protein
RA	5,041,300	T→A	8.9%	intergenic (+230/‑432)	PP_5680 → / → PP_4447	Cro/CI family transcriptional regulator/hypothetical protein
RA	5,078,444	G→T	10.6%	A120A (GCC→GCA)	mgtE ←	magnesium transporter
RA	5,078,925	G→C	9.8%	intergenic (‑122/+275)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,079,174	T→A	15.6%	intergenic (‑371/+26)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,079,177	T→A	16.3%	intergenic (‑374/+23)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,080,879	C→G	8.5%	P236P (CCG→CCC)	lysC ←	aspartokinase
RA	5,083,466	G→C	8.2%	A283G (GCC→GGC)	alaS ←	alanine‑‑tRNA ligase
RA	5,115,751	T→G	7.6%	H28P (CAC→CCC)	PP_4500 ←	TrpH family protein
RA	5,119,243	G→C	6.3%	L323L (CTG→CTC)	PP_4505 →	sensor histidine kinase
RA	5,119,244	G→C	6.3%	E324Q (GAG→CAG)	PP_4505 →	sensor histidine kinase
RA	5,125,765	C→A	7.9%	G170G (GGC→GGA)	PP_4512 →	DMT superfamily permease
RA	5,125,766	T→G	7.9%	S171A (TCC→GCC)	PP_4512 →	DMT superfamily permease
RA	5,165,415	Δ1 bp	9.1%	coding (2513/3906 nt)	hrpA ←	ATP‑dependent helicase HrpA
RA	5,165,419:1	+A	9.4%	coding (2509/3906 nt)	hrpA ←	ATP‑dependent helicase HrpA
RA	5,169,775	T→A	6.1%	W449R (TGG→AGG)	PP_4547 →	glutamine synthetase
RA	5,169,782	T→A	5.9%	L451Q (CTG→CAG)	PP_4547 →	glutamine synthetase
RA	5,169,785	A→G	6.0%	H452R (CAC→CGC)	PP_4547 →	glutamine synthetase
RA	5,171,255	T→A	15.8%	intergenic (+128/+55)	PP_4548 → / ← fadD‑I	oxidoreductase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,172,353	T→C	10.9%	T219A (ACC→GCC)	fadD‑I ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,172,360	G→A	9.2%	G216G (GGC→GGT)	fadD‑I ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,292	T→C	24.6%	intergenic (‑285/+47)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,295	G→C	25.4%	intergenic (‑288/+44)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,296	G→C	25.8%	intergenic (‑289/+43)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,299	G→A	25.4%	intergenic (‑292/+40)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,176,881	C→G	8.2%	Q384H (CAG→CAC)	PP_4553 ←	ECF family RNA polymerase sigma‑70 factor
RA	5,176,885	T→G	7.0%	Q383P (CAG→CCG)	PP_4553 ←	ECF family RNA polymerase sigma‑70 factor
RA	5,176,889	A→T	7.0%	W382R (TGG→AGG)	PP_4553 ←	ECF family RNA polymerase sigma‑70 factor
RA	5,176,893	C→A	8.2%	A380A (GCG→GCT)	PP_4553 ←	ECF family RNA polymerase sigma‑70 factor
RA	5,176,897	C→G	7.0%	R379P (CGT→CCT)	PP_4553 ←	ECF family RNA polymerase sigma‑70 factor
RA	5,182,107	G→T	21.1%	intergenic (‑117/+37)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,113	T→G	21.2%	intergenic (‑123/+31)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,114	C→A	20.9%	intergenic (‑124/+30)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,605	T→C	6.0%	L16P (CTG→CCG)	PP_4562 →	hypothetical protein
RA	5,182,610	C→G	6.1%	R18G (CGG→GGG)	PP_4562 →	hypothetical protein
RA	5,182,615	G→A	6.4%	P19P (CCG→CCA)	PP_4562 →	hypothetical protein
RA	5,182,769	A→C	7.2%	K71Q (AAG→CAG)	PP_4562 →	hypothetical protein
RA	5,184,158	A→C	17.6%	M83L (ATG→CTG)	PP_4564 →	lipoprotein
RA	5,184,165	C→T	13.3%	A85V (GCC→GTC)	PP_4564 →	lipoprotein
RA	5,184,168	A→G	13.3%	D86G (GAC→GGC)	PP_4564 →	lipoprotein
RA	5,184,175	G→T	14.0%	Q88H (CAG→CAT)	PP_4564 →	lipoprotein
RA	5,194,935	T→G	6.8%	intergenic (+29/+24)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,199,693	G→C	6.0%	intergenic (+20/+53)	PP_4579 → / ← PP_4580	LysR family transcriptional regulator/hypothetical protein
RA	5,199,728	G→C	8.1%	intergenic (+55/+18)	PP_4579 → / ← PP_4580	LysR family transcriptional regulator/hypothetical protein
RA	5,227,322	Δ1 bp	5.6%	coding (1785/2391 nt)	PP_4606 ←	ferric siderophore receptor
RA	5,232,102	C→G	13.5%	A214A (GCG→GCC)	PP_4610 ←	PepSY‑associated TM helix domain‑containing protein
RA	5,232,105	C→G	13.5%	P213P (CCG→CCC)	PP_4610 ←	PepSY‑associated TM helix domain‑containing protein
RA	5,233,591	T→C	8.7%	V136A (GTC→GCC)	PP_4611 →	ECF family RNA polymerase sigma‑70 factor
RA	5,233,594	A→T	8.3%	D137V (GAC→GTC)	PP_4611 →	ECF family RNA polymerase sigma‑70 factor
RA	5,233,597	G→A	6.9%	G138D (GGC→GAC)	PP_4611 →	ECF family RNA polymerase sigma‑70 factor
RA	5,239,932	G→A	13.2%	A144V (GCG→GTG)	ldh ←	leucine dehydrogenase
RA	5,239,937	T→C	12.8%	P142P (CCA→CCG)	ldh ←	leucine dehydrogenase
RA	5,253,931	G→A	5.2%	R251C (CGC→TGC)	PP_4630 ←	MerR family transcriptional regulator
RA	5,253,935	G→C	5.2%	F249L (TTC→TTG)	PP_4630 ←	MerR family transcriptional regulator
RA	5,264,338:1	+T	12.8%	intergenic (‑44/+40)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,264,341	T→G	13.6%	intergenic (‑47/+37)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,264,344	C→A	12.0%	intergenic (‑50/+34)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,264,347	Δ1 bp	11.1%	intergenic (‑53/+31)	zinU ← / ← PP_4640	P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein
RA	5,268,999	T→A	12.3%	intergenic (+19/+17)	PP_4643 → / ← radA	xanthine/uracil permease family protein/DNA repair enzyme
RA	5,269,000	T→A	12.0%	intergenic (+20/+16)	PP_4643 → / ← radA	xanthine/uracil permease family protein/DNA repair enzyme
RA	5,291,289	T→A	7.7%	L280* (TTG→TAG)	PP_4664 →	LysR family transcriptional regulator
RA	5,291,293	G→C	8.5%	P281P (CCG→CCC)	PP_4664 →	LysR family transcriptional regulator
RA	5,291,297	T→A	7.6%	Y283N (TAT→AAT)	PP_4664 →	LysR family transcriptional regulator
RA	5,299,083	A→G	6.0%	V356A (GTC→GCC) ‡	recD ←	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease
RA	5,299,084	C→T	6.0%	V356I (GTC→ATC) ‡	recD ←	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease
RA	5,313,324	C→G	13.8%	intergenic (‑595/+119)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,313,327	C→G	15.4%	intergenic (‑598/+116)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,336,227	G→A	10.0%	R870H (CGC→CAC)	PP_4695 →	two‑component system sensor histidine kinase
RA	5,344,509:1	+C	6.5%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,509:2	+T	6.5%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,515	C→G	7.9%	intergenic (+42/‑136)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,519	C→T	10.5%	intergenic (+46/‑132)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,528	A→G	12.7%	intergenic (+55/‑123)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,532	C→G	10.7%	intergenic (+59/‑119)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,537	Δ1 bp	8.2%	intergenic (+64/‑114)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,538	Δ1 bp	8.2%	intergenic (+65/‑113)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,350,531	C→T	8.9%	intergenic (+20/+62)	PP_4704 → / ← PP_4705	hypothetical protein/glyoxalase
RA	5,350,540	C→T	7.4%	intergenic (+29/+53)	PP_4704 → / ← PP_4705	hypothetical protein/glyoxalase
RA	5,350,548	C→G	6.7%	intergenic (+37/+45)	PP_4704 → / ← PP_4705	hypothetical protein/glyoxalase
RA	5,350,549	T→G	6.7%	intergenic (+38/+44)	PP_4704 → / ← PP_4705	hypothetical protein/glyoxalase
RA	5,350,550	Δ1 bp	6.6%	intergenic (+39/+43)	PP_4704 → / ← PP_4705	hypothetical protein/glyoxalase
RA	5,351,390	A→C	9.3%	intergenic (+21/+55)	PP_4706 → / ← PP_4707	hypothetical protein/OsmY‑like protein
RA	5,351,393	G→T	10.5%	intergenic (+24/+52)	PP_4706 → / ← PP_4707	hypothetical protein/OsmY‑like protein
RA	5,364,611	A→T	11.7%	V24D (GTC→GAC)	folP ←	dihydropteroate synthase
RA	5,367,830	A→T	9.5%	K102* (AAG→TAG) ‡	PP_4720 →	RNA‑binding protein
RA	5,367,831	A→T	9.5%	K102M (AAG→ATG) ‡	PP_4720 →	RNA‑binding protein
RA	5,378,308	A→T	7.1%	intergenic (‑37/‑156)	grpE ← / → recN	heat shock protein GrpE/DNA repair/recombination protein
RA	5,381,315	T→C	10.0%	intergenic (+32/+33)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,381,316	T→A	10.4%	intergenic (+33/+32)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,381,317	G→A	10.5%	intergenic (+34/+31)	bamE → / ← PP_4732	outer membrane protein assembly factor BamE/hypothetical protein
RA	5,384,575	G→C	9.9%	G331R (GGC→CGC) ‡	lldP →	L‑lactate permease
RA	5,384,576	G→C	9.8%	G331A (GGC→GCC) ‡	lldP →	L‑lactate permease
RA	5,390,631	C→A	9.7%	intergenic (+672/‑50)	PP_4738 → / → PP_mr56	hypothetical protein/C4 ncRNA
RA	5,390,633	C→G	10.8%	intergenic (+674/‑48)	PP_4738 → / → PP_mr56	hypothetical protein/C4 ncRNA
RA	5,390,635	T→G	10.7%	intergenic (+676/‑46)	PP_4738 → / → PP_mr56	hypothetical protein/C4 ncRNA
RA	5,417,434	C→G	7.7%	A100P (GCG→CCG)	gudD ←	bifunctional D‑glucarate dehydratase/L‑idarate epimerase
RA	5,417,437	A→G	7.4%	S99P (TCG→CCG)	gudD ←	bifunctional D‑glucarate dehydratase/L‑idarate epimerase
RA	5,418,374	A→T	11.2%	S249T (TCG→ACG)	PP_4758 ←	MFS transporter
RA	5,424,538	Δ1 bp	8.8%	coding (89/915 nt)	PP_4764 →	histone deacetylase family protein
RA	5,427,329	G→A	12.9%	I274I (ATC→ATT)	rhlE‑I ←	ATP‑dependent RNA helicase
RA	5,427,336	T→A	12.6%	D272V (GAC→GTC)	rhlE‑I ←	ATP‑dependent RNA helicase
RA	5,427,343	T→C	13.7%	N270D (AAT→GAT)	rhlE‑I ←	ATP‑dependent RNA helicase
RA	5,430,474	C→T	9.6%	intergenic (‑108/+53)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,445,740	C→G	5.3%	S216R (AGC→AGG)	thiD →	phosphomethylpyrimidine kinase
RA	5,458,940:1	+A	14.5%	intergenic (+17/‑45)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,458,946	Δ1 bp	15.7%	intergenic (+23/‑39)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,460,669	Δ1 bp	5.3%	intergenic (+2/‑215)	holA → / → PP_4797	DNA polymerase III subunit delta/hypothetical protein
RA	5,468,121:1	+A	8.6%	coding (819/1047 nt)	mltB ←	membrane‑bound lytic murein transglycosylase B
RA	5,468,126	Δ1 bp	8.5%	coding (814/1047 nt)	mltB ←	membrane‑bound lytic murein transglycosylase B
RA	5,472,204	T→A	11.1%	K95M (AAG→ATG) ‡	rlmH ←	23S rRNA (pseudouridine(1915)‑N(3))‑methyltransferase RlmH
RA	5,472,205	T→A	11.3%	K95* (AAG→TAG) ‡	rlmH ←	23S rRNA (pseudouridine(1915)‑N(3))‑methyltransferase RlmH
RA	5,477,164	A→T	13.5%	intergenic (+29/+83)	PP_4813 → / ← PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
RA	5,477,165	A→T	13.5%	intergenic (+30/+82)	PP_4813 → / ← PP_4814	PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein
RA	5,482,349	G→C	8.6%	G76A (GGC→GCC)	dusB →	tRNA dihydrouridine synthase DusB
RA	5,486,551	C→G	8.0%	A421A (GCC→GCG)	purD →	phosphoribosylamine‑‑glycine ligase
RA	5,486,554	C→G	8.2%	I422M (ATC→ATG)	purD →	phosphoribosylamine‑‑glycine ligase
RA	5,486,759	T→A	6.9%	L14M (TTG→ATG) ‡	PP_4824 →	two‑component system sensor histidine kinase/response regulator
RA	5,486,760	T→A	7.0%	L14* (TTG→TAG) ‡	PP_4824 →	two‑component system sensor histidine kinase/response regulator
RA	5,490,780	G→C	9.8%	S17R (AGC→AGG)	PP_5714 ←	hypothetical protein
RA	5,503,183	C→A	6.1%	L29M (CTG→ATG) ‡	oprC →	copper receptor OprC
RA	5,503,184	T→G	6.2%	L29R (CTG→CGG) ‡	oprC →	copper receptor OprC
RA	5,503,190	C→G	6.4%	A31G (GCC→GGC)	oprC →	copper receptor OprC
RA	5,503,196	C→A	6.6%	P33H (CCT→CAT) ‡	oprC →	copper receptor OprC
RA	5,503,197	T→G	6.7%	P33P (CCT→CCG) ‡	oprC →	copper receptor OprC
RA	5,507,652	G→C	11.3%	A289P (GCG→CCG)	cycA →	D‑alanine/beta‑alanine/D‑serine/glycine permease
RA	5,507,655	G→C	10.9%	A290P (GCG→CCG)	cycA →	D‑alanine/beta‑alanine/D‑serine/glycine permease
RA	5,509,493	A→T	10.9%	A350A (GCA→GCT)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,509,497	G→C	10.6%	A352P (GCC→CCC)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,509,502	G→C	11.0%	G353G (GGG→GGC)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,509,506	A→T	10.9%	S355C (AGC→TGC)	urtA →	urea ABC transporter substrate‑binding protein
RA	5,512,951	C→G	9.2%	A180G (GCC→GGC)	urtD →	ABC transporter ATP‑binding protein
RA	5,512,958	C→G	7.3%	R182R (CGC→CGG)	urtD →	ABC transporter ATP‑binding protein
RA	5,518,601	A→T	14.3%	C10S (TGC→AGC)	PP_4850 ←	membrane protein
RA	5,531,058	A→C	7.2%	R421R (CGT→CGG)	braE ←	high‑affinity branched‑chain amino acid ABC transporter permease BraE
RA	5,541,768	T→A	9.2%	I327F (ATC→TTC)	dnaB ←	replicative DNA helicase
RA	5,541,769	T→A	7.7%	E326D (GAA→GAT)	dnaB ←	replicative DNA helicase
RA	5,546,501	G→A	8.9%	H11Y (CAC→TAC)	rlmB ←	23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
RA	5,546,502	T→C	8.9%	V10V (GTA→GTG)	rlmB ←	23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
RA	5,548,747	T→G	6.0%	M119L (ATG→CTG)	rnr ←	exoribonuclease R
RA	5,550,709	T→A	7.3%	S301S (TCT→TCA)	PP_4881 →	iron ABC transporter substrate‑binding protein
RA	5,550,711	A→G	8.0%	D302G (GAC→GGC)	PP_4881 →	iron ABC transporter substrate‑binding protein
RA	5,550,718	C→T	6.8%	G304G (GGC→GGT)	PP_4881 →	iron ABC transporter substrate‑binding protein
RA	5,550,720	T→A	6.7%	L305Q (CTG→CAG)	PP_4881 →	iron ABC transporter substrate‑binding protein
RA	5,566,464	T→A	15.2%	Q358L (CAG→CTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,566,467	T→A	15.2%	Q357L (CAG→CTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,570,228	Δ1 bp	7.9%	coding (72/861 nt)	nnrD ←	ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase
RA	5,570,230:1	+A	7.9%	coding (70/861 nt)	nnrD ←	ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase
RA	5,574,838:1	+T	7.0%	coding (507/1041 nt)	motB ←	flagellar motor rotation protein
RA	5,574,842	Δ1 bp	7.3%	coding (503/1041 nt)	motB ←	flagellar motor rotation protein
RA	5,582,067	C→A	7.4%	L351M (CTG→ATG) ‡	PP_4910 →	hypothetical protein
RA	5,582,068	T→G	7.1%	L351R (CTG→CGG) ‡	PP_4910 →	hypothetical protein
RA	5,609,045	G→C	8.7%	R202G (CGC→GGC)	waaA ←	3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,609,048	C→G	8.0%	E201Q (GAG→CAG)	waaA ←	3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,609,051	G→C	8.0%	P200A (CCT→GCT)	waaA ←	3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,610,676	G→A	100%	E14K (GAA→AAA)	emrE →	small multidrug resistance protein
RA	5,625,483	A→C	9.2%	L110R (CTG→CGG) ‡	PP_4943 ←	glycosyl transferase
RA	5,625,484	G→T	9.0%	L110M (CTG→ATG) ‡	PP_4943 ←	glycosyl transferase
RA	5,634,508	T→G	12.1%	intergenic (+33/+350)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,634,509	C→A	12.0%	intergenic (+34/+349)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,645,727	A→G	7.8%	A343A (GCA→GCG)	PP_4954 →	membrane protein
RA	5,648,260	G→C	15.0%	intergenic (+16/+8)	elaA → / ← PP_4957	acetyltransferase/hypothetical protein
RA	5,651,425	T→G	17.6%	intergenic (‑182/+31)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,651,428	C→A	17.6%	intergenic (‑185/+28)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,655,682	T→G	10.9%	intergenic (‑86/+66)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,687	C→A	10.7%	intergenic (‑91/+61)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,692	Δ1 bp	7.5%	intergenic (‑96/+56)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,660,233	G→T	14.7%	intergenic (+35/‑194)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,660,236	A→C	15.0%	intergenic (+38/‑191)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,667,309	G→T	8.4%	intergenic (+36/+35)	nhaP → / ← PP_4975	NhaP‑type Na+(K+)/H+ antiporter/acyl‑CoA thioesterase
RA	5,667,310	A→C	6.7%	intergenic (+37/+34)	nhaP → / ← PP_4975	NhaP‑type Na+(K+)/H+ antiporter/acyl‑CoA thioesterase
RA	5,688,376	A→C	6.6%	F216V (TTC→GTC)	pilJ ←	twitching motility protein PilJ
RA	5,688,378	G→C	6.9%	A215G (GCC→GGC)	pilJ ←	twitching motility protein PilJ
RA	5,688,380	G→T	8.2%	D214E (GAC→GAA)	pilJ ←	twitching motility protein PilJ
RA	5,697,372	G→C	5.7%	intergenic (+26/‑51)	hslV → / → hslU	ATP‑dependent HslVU protease peptidase subunit/protease HslVU ATPase subunit
RA	5,697,374	T→G	6.7%	intergenic (+28/‑49)	hslV → / → hslU	ATP‑dependent HslVU protease peptidase subunit/protease HslVU ATPase subunit
RA	5,701,276	G→C	18.6%	intergenic (+18/‑45)	phaA → / → phaB	poly(3‑hydroxyalkanoate) polymerase/poly(3‑hydroxyalkanoate) depolymerase
RA	5,701,278	C→G	19.1%	intergenic (+20/‑43)	phaA → / → phaB	poly(3‑hydroxyalkanoate) polymerase/poly(3‑hydroxyalkanoate) depolymerase
RA	5,701,283	C→G	20.5%	intergenic (+25/‑38)	phaA → / → phaB	poly(3‑hydroxyalkanoate) polymerase/poly(3‑hydroxyalkanoate) depolymerase
RA	5,701,285	G→C	20.5%	intergenic (+27/‑36)	phaA → / → phaB	poly(3‑hydroxyalkanoate) polymerase/poly(3‑hydroxyalkanoate) depolymerase
RA	5,706,643	T→A	6.4%	L202Q (CTG→CAG)	PP_5009 →	hypothetical protein
RA	5,718,230	T→G	6.1%	V291V (GTT→GTG)	PP_5020 →	methyl‑accepting chemotaxis protein
RA	5,718,233	C→A	6.1%	A292A (GCC→GCA)	PP_5020 →	methyl‑accepting chemotaxis protein
RA	5,725,702	T→G	10.6%	K440N (AAA→AAC)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,725,708	C→G	10.8%	P438P (CCG→CCC)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,725,714	C→A	11.3%	P436P (CCG→CCT)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,740,513	G→A	12.8%	intergenic (+22/+49)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,523	T→G	19.5%	intergenic (+32/+39)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,526	A→T	20.5%	intergenic (+35/+36)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,527	A→T	20.3%	intergenic (+36/+35)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,530	C→A	20.0%	intergenic (+39/+32)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,743,377	A→G	8.2%	intergenic (‑154/+93)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,387	G→A	8.0%	intergenic (‑164/+83)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,903	A→C	13.6%	L673R (CTC→CGC)	glgP ←	glycogen phosphorylase
RA	5,743,906	G→T	15.4%	A672E (GCG→GAG)	glgP ←	glycogen phosphorylase
RA	5,750,363	G→A	8.0%	A419V (GCC→GTC)	thiI ←	tRNA sulfurtransferase
RA	5,753,541	T→G	13.8%	intergenic (+46/‑320)	glnA → / → glnL	glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,753,542	C→A	13.2%	intergenic (+47/‑319)	glnA → / → glnL	glutamine synthetase/two‑component system sensor histidine kinase/phosphatase GlnL/GlnG
RA	5,761,357	T→A	7.5%	L118Q (CTG→CAG)	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,761,360	T→A	7.5%	L119Q (CTG→CAG)	gpmI →	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase
RA	5,764,854	C→T	10.1%	A260V (GCC→GTC)	ctpA →	carboxy‑terminal‑processing protease
RA	5,764,857	A→G	10.3%	D261G (GAC→GGC)	ctpA →	carboxy‑terminal‑processing protease
RA	5,777,456:1	+T	7.8%	intergenic (+19/+24)	betA‑II → / ← PP_5065	choline dehydrogenase/hypothetical protein
RA	5,777,459	Δ1 bp	7.8%	intergenic (+22/+21)	betA‑II → / ← PP_5065	choline dehydrogenase/hypothetical protein
RA	5,777,620	T→G	7.0%	K671Q (AAG→CAG)	PP_5065 ←	hypothetical protein
RA	5,777,621	C→A	7.0%	L670L (CTG→CTT)	PP_5065 ←	hypothetical protein
RA	5,790,676	A→T	9.8%	intergenic (‑24/+33)	PP_5073 ← / ← hemE	hypothetical protein/uroporphyrinogen decarboxylase
RA	5,790,681	A→T	10.2%	intergenic (‑29/+28)	PP_5073 ← / ← hemE	hypothetical protein/uroporphyrinogen decarboxylase
RA	5,792,273	G→A	6.5%	P372S (CCT→TCT)	gltD ←	glutamate synthase subunit beta
RA	5,797,363	A→C	8.9%	L198R (CTC→CGC)	gltB ←	L‑glutamate synthase subunit alpha
RA	5,797,368	G→T	9.4%	R196R (CGC→CGA)	gltB ←	L‑glutamate synthase subunit alpha
RA	5,815,587	C→T	12.7%	intergenic (+15/+76)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,816,899	C→T	10.5%	intergenic (+29/+100)	PP_5092 → / ← pilT	NLP/P60 protein/twitching motility protein
RA	5,835,598	T→G	7.8%	P110P (CCT→CCG)	PP_5114 →	adenine methyltransferase
RA	5,835,601	C→A	7.6%	R111R (CGC→CGA)	PP_5114 →	adenine methyltransferase
RA	5,840,511	C→T	6.8%	L42L (CTG→CTA) ‡	sseA ←	3‑mercaptopyruvate sulfurtransferase
RA	5,840,512	A→G	6.1%	L42P (CTG→CCG) ‡	sseA ←	3‑mercaptopyruvate sulfurtransferase
RA	5,846,239	T→C	7.2%	T217A (ACC→GCC)	mutM ←	formamidopyrimidine‑DNA glycosylase
RA	5,846,246	G→A	6.8%	G214G (GGC→GGT)	mutM ←	formamidopyrimidine‑DNA glycosylase
RA	5,851,227	T→A	9.5%	intergenic (+34/+34)	ilvD → / ← PP_5129	dihydroxy‑acid dehydratase/hypothetical protein
RA	5,856,836	T→G	6.3%	V236G (GTG→GGG)	PP_5133 →	membrane protein
RA	5,856,842	A→G	7.3%	D238G (GAC→GGC)	PP_5133 →	membrane protein
RA	5,857,758	A→C	6.4%	E84A (GAG→GCG) ‡	PP_5134 →	hypothetical protein
RA	5,857,759	G→T	6.8%	E84D (GAG→GAT) ‡	PP_5134 →	hypothetical protein
RA	5,873,945	G→C	5.5%	P198P (CCG→CCC)	PP_5147 →	haloacid dehalogenase‑like family hydrolase
RA	5,883,651	C→G	13.5%	A60G (GCC→GGC)	PP_5157 →	hypothetical protein
RA	5,896,391	A→G	7.0%	intergenic (‑160/+25)	cysU ← / ← sbp‑II	sulfate ABC transporter permease CysT/sulfate ABC transporter substrate‑binding protein
RA	5,896,392	C→T	7.5%	intergenic (‑161/+24)	cysU ← / ← sbp‑II	sulfate ABC transporter permease CysT/sulfate ABC transporter substrate‑binding protein
RA	5,897,826	A→G	12.5%	intergenic (‑170/+64)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,829	G→A	12.8%	intergenic (‑173/+61)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,834	C→G	13.4%	intergenic (‑178/+56)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,835	G→C	12.5%	intergenic (‑179/+55)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,838	G→C	12.7%	intergenic (‑182/+52)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,839	C→G	12.8%	intergenic (‑183/+51)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,844	T→C	11.7%	intergenic (‑188/+46)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,847	C→T	12.7%	intergenic (‑191/+43)	PP_5172 ← / ← PP_5173	hypothetical protein/RND family transporter
RA	5,897,995	G→C	7.0%	Y983* (TAC→TAG)	PP_5173 ←	RND family transporter
RA	5,897,998	G→C	7.3%	A982A (GCC→GCG)	PP_5173 ←	RND family transporter
RA	5,903,201	C→T	9.0%	intergenic (‑109/‑159)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,903,204	G→A	13.5%	intergenic (‑112/‑156)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,903,220	G→T	14.5%	intergenic (‑128/‑140)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,903,221	A→C	14.2%	intergenic (‑129/‑139)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,906,204	G→A	7.9%	T218I (ACC→ATC) ‡	spuF ←	spermidine/putrescine ABC transporter ATP binding protein
RA	5,906,205	T→C	6.4%	T218A (ACC→GCC) ‡	spuF ←	spermidine/putrescine ABC transporter ATP binding protein
RA	5,914,180	C→T	13.3%	intergenic (+16/+137)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,914,182	C→G	13.0%	intergenic (+18/+135)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,914,184	A→G	13.4%	intergenic (+20/+133)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,914,197	T→C	10.6%	intergenic (+33/+120)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,928,771	G→A	7.6%	R112C (CGC→TGC)	fbpA ←	iron ABC transporter substrate‑binding protein
RA	5,943,898	G→C	6.7%	N131K (AAC→AAG)	PP_5211 ←	ChaC‑related protein
RA	5,948,729	A→G	6.8%	intergenic (‑54/+28)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,948,738	T→A	8.2%	intergenic (‑63/+19)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,948,739	T→A	8.2%	intergenic (‑64/+18)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,951,645	T→C	11.5%	Q456Q (CAA→CAG)	ppk ←	polyphosphate kinase
RA	5,951,650	G→A	10.4%	L455L (CTG→TTG)	ppk ←	polyphosphate kinase
RA	5,960,051	A→T	11.3%	noncoding (74/103 nt)	PP_mr63 ←	rnk_pseudo ncRNA
RA	5,960,052	A→T	11.3%	noncoding (73/103 nt)	PP_mr63 ←	rnk_pseudo ncRNA
RA	5,962,329	A→C	11.2%	D390A (GAC→GCC)	lysA‑II →	diaminopimelate decarboxylase
RA	5,962,332	G→T	10.1%	G391V (GGC→GTC)	lysA‑II →	diaminopimelate decarboxylase
RA	5,963,902	T→G	10.3%	Y216D (TAT→GAT)	PP_5229 →	hypothetical protein
RA	5,963,907	C→A	10.0%	I217I (ATC→ATA)	PP_5229 →	hypothetical protein
RA	5,967,943	G→T	10.5%	A64D (GCC→GAC)	glnK ←	NRII(GlnL/NtrB) phosphatase activator
RA	5,967,946	A→C	10.5%	V63G (GTC→GGC)	glnK ←	NRII(GlnL/NtrB) phosphatase activator
RA	5,978,158	T→A	14.8%	D9V (GAC→GTC)	PP_5240 ←	two‑component system response regulator
RA	5,982,858	C→G	7.3%	G1149G (GGC→GGG)	PP_5242 →	GAF domain‑containing sensor histidine kinase
RA	5,982,861	C→G	7.4%	F1150L (TTC→TTG)	PP_5242 →	GAF domain‑containing sensor histidine kinase
RA	5,982,864	C→G	7.4%	N1151K (AAC→AAG)	PP_5242 →	GAF domain‑containing sensor histidine kinase
RA	5,984,492	T→C	11.9%	intergenic (+32/+57)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,498	G→A	10.4%	intergenic (+38/+51)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,500	T→C	12.1%	intergenic (+40/+49)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,503	G→A	11.1%	intergenic (+43/+46)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,505	T→C	11.4%	intergenic (+45/+44)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,511	G→A	11.7%	intergenic (+51/+38)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,988,865	G→A	36.3%	intergenic (+103/‑443)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,875	T→C	38.4%	intergenic (+113/‑433)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,880	C→T	38.0%	intergenic (+118/‑428)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,881	G→T	37.7%	intergenic (+119/‑427)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,882	C→T	37.8%	intergenic (+120/‑426)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,885	A→G	36.3%	intergenic (+123/‑423)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,891	G→C	36.9%	intergenic (+129/‑417)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,893	C→G	37.3%	intergenic (+131/‑415)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,896	C→T	37.3%	intergenic (+134/‑412)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,900	C→G	36.2%	intergenic (+138/‑408)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,904	C→T	35.4%	intergenic (+142/‑404)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,906	C→T	35.9%	intergenic (+144/‑402)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,945	C→A	44.6%	intergenic (+183/‑363)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,950	C→T	45.1%	intergenic (+188/‑358)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,951	A→G	45.4%	intergenic (+189/‑357)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,961	T→C	44.4%	intergenic (+199/‑347)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,967	Δ1 bp	41.5%	intergenic (+205/‑341)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,994,817	G→C	7.3%	V496V (GTG→GTC)	PP_5251 →	transporter
RA	5,997,245:1	+G	24.5%	intergenic (‑158/+42)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	5,997,250	Δ1 bp	25.0%	intergenic (‑163/+37)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	6,002,274	G→C	9.2%	A28G (GCC→GGC)	amaA ←	L‑pipecolate oxidase
RA	6,002,280	G→C	9.2%	A26G (GCC→GGC)	amaA ←	L‑pipecolate oxidase
RA	6,005,043	T→G	9.6%	intergenic (+25/‑151)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,050	G→C	13.2%	intergenic (+32/‑144)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,053	A→T	12.3%	intergenic (+35/‑141)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,056	G→C	12.8%	intergenic (+38/‑138)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,063	C→A	9.4%	intergenic (+45/‑131)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,008,238	C→A	8.2%	R156R (CGC→CGA)	norM →	multidrug resistance protein NorM
RA	6,008,239	T→G	8.2%	S157A (TCG→GCG)	norM →	multidrug resistance protein NorM
RA	6,011,545	T→G	6.6%	I114S (ATC→AGC)	rep →	single‑stranded DNA dependent ATPase
RA	6,011,549	G→C	6.4%	K115N (AAG→AAC)	rep →	single‑stranded DNA dependent ATPase
RA	6,011,552	G→C	6.2%	A116A (GCG→GCC)	rep →	single‑stranded DNA dependent ATPase
RA	6,021,757	C→A	14.7%	intergenic (‑52/‑92)	PP_5272 ← / → PP_5273	hypothetical protein/oxidoreductase
RA	6,023,215	G→A	9.8%	intergenic (+74/+70)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,023,216	T→C	9.8%	intergenic (+75/+69)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,049,348	G→A	10.3%	V52M (GTG→ATG) ‡	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,049,349	T→C	10.9%	V52A (GTG→GCG) ‡	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,049,498	A→T	6.3%	K102* (AAG→TAG) ‡	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,049,499	A→T	6.3%	K102M (AAG→ATG) ‡	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,050,543	C→G	8.2%	P450R (CCG→CGG)	spoT →	bifunctional (p)ppGpp synthase/hydrolase
RA	6,067,956	C→G	6.5%	A181A (GCC→GCG)	PP_5322 →	metal ion transporter
RA	6,070,833	A→T	15.7%	intergenic (‑133/+30)	PP_5324 ← / ← phoU	two‑component system response regulator/phosphate transport‑associated protein
RA	6,070,834	A→T	15.7%	intergenic (‑134/+29)	PP_5324 ← / ← phoU	two‑component system response regulator/phosphate transport‑associated protein
RA	6,077,989	A→T	5.7%	intergenic (‑235/+3)	PP_5329 ← / ← PP_5330	phosphate ABC transporter substrate‑binding protein/MFS transporter
RA	6,081,044	T→A	30.2%	intergenic (+35/+27)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,081,045	T→A	30.2%	intergenic (+36/+26)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,089,270	T→C	8.3%	Y131Y (TAT→TAC)	potF‑IV →	putrescine‑binding protein
RA	6,089,273	G→A	8.3%	M132I (ATG→ATA)	potF‑IV →	putrescine‑binding protein
RA	6,097,807	T→C	10.5%	L289L (TTG→CTG)	PP_5348 →	LysR family transcriptional regulator
RA	6,104,816	G→A	6.9%	H567Y (CAC→TAC)	PP_5355 ←	sodium/proton antiporter
RA	6,108,391	G→C	10.9%	W23C (TGG→TGC)	PP_5358 →	hypothetical protein
RA	6,108,759	G→C	7.4%	A312G (GCG→GGG)	PP_5359 ←	CobW/P47K family protein
RA	6,125,913	G→T	9.7%	G218W (GGG→TGG)	PP_5374 →	choline/carnitine/betaine transporter family protein
RA	6,125,918	G→C	9.8%	L219L (CTG→CTC)	PP_5374 →	choline/carnitine/betaine transporter family protein
RA	6,125,923	A→C	9.4%	Q221P (CAG→CCG)	PP_5374 →	choline/carnitine/betaine transporter family protein
RA	6,129,216	A→C	14.0%	intergenic (+22/+45)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,129,226	C→T	13.9%	intergenic (+32/+35)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,129,229	A→T	14.1%	intergenic (+35/+32)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,129,232	A→G	14.3%	intergenic (+38/+29)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,129,242	G→T	13.7%	intergenic (+48/+19)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,132,191	C→G	9.6%	G573A (GGC→GCC)	copA‑II ←	copper resistance protein A
RA	6,138,499	T→A	7.5%	F300I (TTC→ATC) ‡	czcC →	CzcC family metal RND transporter outer membrane protein
RA	6,138,500	T→A	7.6%	F300Y (TTC→TAC) ‡	czcC →	CzcC family metal RND transporter outer membrane protein
RA	6,171,910	C→A	6.1%	A150S (GCG→TCG)	glmS ←	L‑glutamine/D‑fructose‑6‑phosphate aminotransferase
RA	6,174,764	G→T	10.9%	intergenic (‑70/+49)	glmU ← / ← atpC	bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/ATP synthase subunit epsilon
RA	6,174,765	A→C	10.9%	intergenic (‑71/+48)	glmU ← / ← atpC	bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/ATP synthase subunit epsilon

Unassigned missing coverage evidence
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4808205	4808218	14	48 [0]	[0] 42	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1425 =	49 (0.930)	3 (0.060)	3/232	NT	6.0%	coding (396/792 nt)	parA	chromosome partition protein
	?	NC_002947	1453 =	48 (0.970)					coding (368/792 nt)	parA	chromosome partition protein
*	?	NC_002947	= 15123	36 (0.680)	6 (0.120)	4/232	NT	14.5%	coding (1794/2421 nt)	gyrB	DNA gyrase subunit B
	?	NC_002947	= 15128	37 (0.750)					coding (1799/2421 nt)	gyrB	DNA gyrase subunit B
*	?	NC_002947	= 42650	38 (0.720)	7 (0.140)	6/232	NT	15.6%	coding (594/1026 nt)	PP_0039	hypothetical protein
	?	NC_002947	= 42663	40 (0.810)					coding (607/1026 nt)	PP_0039	hypothetical protein
*	?	NC_002947	90359 =	82 (1.560)	6 (0.130)	5/214	NT	7.9%	intergenic (+34/+88)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
	?	NC_002947	90414 =	69 (1.510)					intergenic (+89/+33)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
*	?	NC_002947	= 95630	43 (0.820)	18 (0.370)	11/228	NT	29.1%	intergenic (+22/+50)	PP_0087/PP_0088	hypothetical protein/alkanal monooxygenase
	?	NC_002947	= 95664	48 (0.990)					intergenic (+56/+16)	PP_0087/PP_0088	hypothetical protein/alkanal monooxygenase
*	?	NC_002947	= 109557	76 (1.450)	4 (0.080)	4/246	NT	5.2%	coding (748/1128 nt)	PP_0103	cytochrome c oxidase subunit 2
	?	NC_002947	= 109591	70 (1.330)					coding (782/1128 nt)	PP_0103	cytochrome c oxidase subunit 2
*	?	NC_002947	= 110027	63 (1.200)	7 (0.140)	5/236	NT	10.0%	coding (47/1590 nt)	ctaD	cytochrome c oxidase subunit 1
	?	NC_002947	= 110047	65 (1.290)					coding (67/1590 nt)	ctaD	cytochrome c oxidase subunit 1
*	?	NC_002947	133223 =	45 (0.860)	5 (0.100)	4/236	NT	9.8%	coding (1/855 nt)	PP_0128	hypothetical protein
	?	NC_002947	133252 =	49 (0.970)					coding (30/855 nt)	PP_0128	hypothetical protein
*	?	NC_002947	141714 =	60 (1.140)	3 (0.060)	3/230	NT	5.0%	coding (133/1347 nt)	algB	alginate biosynthesis transcriptional regulator AlgB
	?	NC_002947	141770 =	57 (1.160)					coding (77/1347 nt)	algB	alginate biosynthesis transcriptional regulator AlgB
*	?	NC_002947	= 145221	46 (0.880)	6 (0.120)	4/236	NT	11.6%	coding (455/1329 nt)	gltP	glutamate/aspartate‑proton DAACS transporter
	?	NC_002947	= 145235	47 (0.930)					coding (469/1329 nt)	gltP	glutamate/aspartate‑proton DAACS transporter
*	?	NC_002947	146277 =	61 (1.160)	4 (0.080)	4/234	NT	6.7%	coding (35/1230 nt)	PP_0138	membrane protein
	?	NC_002947	146295 =	53 (1.060)					coding (53/1230 nt)	PP_0138	membrane protein
*	?	NC_002947	152820 =	41 (0.780)	6 (0.120)	4/230	NT	12.6%	coding (787/1407 nt)	PP_0144	insulinase family metalloprotease
	?	NC_002947	152876 =	45 (0.920)					coding (731/1407 nt)	PP_0144	insulinase family metalloprotease
*	?	NC_002947	= 160985	37 (0.700)	4 (0.080)	4/232	NT	10.0%	coding (51/294 nt)	PP_0151	hypothetical protein
	?	NC_002947	= 160992	37 (0.750)					coding (44/294 nt)	PP_0151	hypothetical protein
*	?	NC_002947	= 161086	40 (0.760)	6 (0.120)	5/230	NT	12.9%	intergenic (‑51/+39)	PP_0151/PP_0152	hypothetical protein/hypothetical protein
	?	NC_002947	= 161100	44 (0.900)					intergenic (‑65/+25)	PP_0151/PP_0152	hypothetical protein/hypothetical protein
*	?	NC_002947	172511 =	NA (NA)	3 (0.060)	3/238	NT	NA	noncoding (1123/1522 nt)	PP_16SA	16S ribosomal RNA
	?	NC_002947	172531 =	NA (NA)					noncoding (1143/1522 nt)	PP_16SA	16S ribosomal RNA
*	?	NC_002947	= 176374	NA (NA)	44 (0.920)	20/224	NT	NA	intergenic (+18/‑445)	PP_5SA/PP_16SB	5S ribosomal RNA/16S ribosomal RNA
	?	NC_002947	= 176388	NA (NA)					intergenic (+32/‑431)	PP_5SA/PP_16SB	5S ribosomal RNA/16S ribosomal RNA
*	?	NC_002947	= 189929	40 (0.760)	3 (0.060)	3/230	NT	7.4%	intergenic (+91/+66)	PP_0165/PP_0166	GGDEF domain‑containing protein/HlyD family secretion protein
	?	NC_002947	= 189935	38 (0.770)					intergenic (+97/+60)	PP_0165/PP_0166	GGDEF domain‑containing protein/HlyD family secretion protein
*	?	NC_002947	208432 =	NA (NA)	10 (0.200)	5/234	NT	NA	coding (13938/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	209747 =	NA (NA)					coding (15253/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	= 208935	NA (NA)	3 (0.060)	3/236	NT	5.0%	coding (14441/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 210907	59 (1.120)					coding (16413/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	235331 =	69 (1.310)	8 (0.180)	8/214	NT	11.9%	intergenic (+28/+97)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
	?	NC_002947	235390 =	59 (1.290)					intergenic (+87/+38)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
*	?	NC_002947	= 264723	42 (0.800)	4 (0.080)	4/232	NT	10.1%	intergenic (+31/‑47)	gabD‑I/PP_mr03	succinate‑semialdehyde dehydrogenase/gabT regulatory region
	?	NC_002947	= 264742	32 (0.650)					intergenic (+50/‑28)	gabD‑I/PP_mr03	succinate‑semialdehyde dehydrogenase/gabT regulatory region
*	?	NC_002947	= 277249	87 (1.660)	5 (0.100)	5/232	NT	7.1%	intergenic (‑82/+15)	PP_0223/PP_0224	DszC family monooxygenase/DszC family monooxygenase
	?	NC_002947	= 5538647	48 (0.970)					intergenic (+89/+32)	PP_4871/PP_4872	lysine decarboxylase family protein/hypothetical protein
*	?	NC_002947	279183 =	61 (1.160)	4 (0.080)	4/234	NT	6.0%	coding (396/759 nt)	sctC	sulfur compound ABC transporter ATP‑binding protein
	?	NC_002947	279228 =	67 (1.340)					coding (351/759 nt)	sctC	sulfur compound ABC transporter ATP‑binding protein
*	?	NC_002947	= 282335	79 (1.500)	6 (0.130) +TTGGTATGTTCT	6/222	NT	8.1%	intergenic (+54/‑216)	PP_0228/betT‑II	serine acetyltransferase/choline/carnitine/betaine transporter
	?	NC_002947	= 4282157	71 (1.350)					intergenic (‑690/+28)	PP_3751/PP_3753	cyanate transporter/AraC family transcriptional regulator
*	?	NC_002947	295700 =	87 (1.660)	9 (0.190)	9/218	NT	11.8%	intergenic (+47/+95)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
	?	NC_002947	295759 =	57 (1.230)					intergenic (+106/+36)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
*	?	NC_002947	= 298452	58 (1.100)	5 (0.100)	5/236	NT	7.7%	coding (90/384 nt)	PP_0244	hypothetical protein
	?	NC_002947	= 298489	64 (1.270)					coding (53/384 nt)	PP_0244	hypothetical protein
*	?	NC_002947	= 304450	52 (0.990)	4 (0.080)	4/236	NT	7.6%	coding (321/621 nt)	PP_0249	hypothetical protein
	?	NC_002947	= 304473	47 (0.930)					coding (298/621 nt)	PP_0249	hypothetical protein
*	?	NC_002947	316005 =	61 (1.160)	8 (0.180)	8/210	NT	13.9%	intergenic (+17/+66)	cysQ/PP_0262	3'(2'),5'‑bisphosphate nucleotidase CysQ/hypothetical protein
	?	NC_002947	316053 =	47 (1.050)					intergenic (+65/+18)	cysQ/PP_0262	3'(2'),5'‑bisphosphate nucleotidase CysQ/hypothetical protein
*	?	NC_002947	321952 =	68 (1.290)	4 (0.080)	4/232	NT	6.0%	intergenic (+237/+221)	aguA/PP_0267	agmatine deiminase/ferric siderophore receptor
	?	NC_002947	321978 =	62 (1.250)					intergenic (+263/+195)	aguA/PP_0267	agmatine deiminase/ferric siderophore receptor
*	?	NC_002947	356087 =	74 (1.410)	17 (0.350)	12/230	NT	19.9%	coding (120/948 nt)	cbcX	choline/betaine/carnitine ABC transporter substrate‑binding protein
	?	NC_002947	356108 =	68 (1.380)					coding (99/948 nt)	cbcX	choline/betaine/carnitine ABC transporter substrate‑binding protein
*	?	NC_002947	359677 =	69 (1.310)	10 (0.200)	9/232	NT	13.7%	intergenic (+34/+86)	gbdR/PP_0299	AraC family transcriptional regulator/hypothetical protein
	?	NC_002947	359721 =	61 (1.230)					intergenic (+78/+42)	gbdR/PP_0299	AraC family transcriptional regulator/hypothetical protein
*	?	NC_002947	363530 =	60 (1.140)	4 (0.090)	4/212	NT	7.4%	intergenic (‑45/+122)	lcdH/PP_0303	L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme
	?	NC_002947	363623 =	49 (1.080)					intergenic (‑138/+29)	lcdH/PP_0303	L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme
*	?	NC_002947	372617 =	76 (1.450)	9 (0.180)	8/238	NT	11.3%	intergenic (+34/‑145)	dgcA/dgcB	dimethylglycine dehydrogenase subunit/dimethylglycine dehydrogenase subunit
	?	NC_002947	372704 =	68 (1.340)					intergenic (+121/‑58)	dgcA/dgcB	dimethylglycine dehydrogenase subunit/dimethylglycine dehydrogenase subunit
*	?	NC_002947	380836 =	66 (1.260)	7 (0.160)	6/200	NT	12.8%	intergenic (+23/+86)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
	?	NC_002947	380916 =	42 (0.980)					intergenic (+103/+6)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
*	?	NC_002947	= 400649	NA (NA)	4 (0.080)	4/236	NT	100%	coding (232/1059 nt)	PP_0334	transposase
	?	NC_002947	= 400667	0 (0.000)					coding (250/1059 nt)	PP_0334	transposase
*	?	NC_002947	401767 =	77 (1.460)	8 (0.170)	5/220	NT	10.1%	intergenic (+291/+138)	PP_0334/PP_0335	transposase/glutathione S‑transferase family protein
	?	NC_002947	401825 =	73 (1.550)					intergenic (+349/+80)	PP_0334/PP_0335	transposase/glutathione S‑transferase family protein
*	?	NC_002947	403254 =	60 (1.140)	4 (0.090)	3/216	NT	7.3%	intergenic (‑54/+115)	msrA/PP_0337	peptide methionine sulfoxide reductase MsrA/sensory box protein
	?	NC_002947	= 5162628	49 (1.060)					intergenic (+103/+98)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
*	?	NC_002947	= 414024	39 (0.740)	16 (0.400)	14/190	NT	29.3%	intergenic (+41/‑162)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
	?	NC_002947	= 414054	47 (1.160)					intergenic (+71/‑132)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
*	?	NC_002947	445062 =	39 (0.740)	6 (0.150)	6/192	NT	16.8%	intergenic (+32/‑256)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
	?	NC_002947	445155 =	29 (0.710)					intergenic (+125/‑163)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
*	?	NC_002947	= 445088	36 (0.680)	10 (0.240)	8/192	NT	26.0%	intergenic (+58/‑230)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
	?	NC_002947	= 445127	29 (0.710)					intergenic (+97/‑191)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
*	?	NC_002947	447140 =	53 (1.010)	6 (0.150) +28 bp	4/190	NT	11.7%	intergenic (+17/‑285)	PP_0368/PP_0369	acyl‑CoA dehydrogenase/diguanylate cyclase
	?	NC_002947	= 3252686	64 (1.220)					intergenic (+173/+70)	ureG/PP_2851	urease accessory protein/hypothetical protein
*	?	NC_002947	449293 =	60 (1.140)	4 (0.080)	4/236	NT	6.7%	coding (461/1779 nt)	PP_0370	acyl‑CoA dehydrogenase family protein
	?	NC_002947	449326 =	53 (1.050)					coding (494/1779 nt)	PP_0370	acyl‑CoA dehydrogenase family protein
*	?	NC_002947	462721 =	56 (1.070)	7 (0.140)	7/234	NT	11.8%	coding (682/795 nt)	davA	5‑aminopentanamidase
	?	NC_002947	462754 =	51 (1.020)					coding (649/795 nt)	davA	5‑aminopentanamidase
*	?	NC_002947	478264 =	83 (1.580)	4 (0.100)	4/186	NT	7.8%	intergenic (+9/+101)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	478359 =	32 (0.810)					intergenic (+104/+6)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
*	?	NC_002947	482080 =	64 (1.220)	10 (0.200)	9/238	NT	14.7%	coding (284/1272 nt)	PP_0396	hypothetical protein
	?	NC_002947	482100 =	54 (1.060)					coding (264/1272 nt)	PP_0396	hypothetical protein
*	?	NC_002947	497681 =	52 (0.990)	6 (0.120)	6/236	NT	11.2%	coding (1550/2388 nt)	PP_0409	two‑component system sensor histidine kinase
	?	NC_002947	497744 =	45 (0.890)					coding (1613/2388 nt)	PP_0409	two‑component system sensor histidine kinase
*	?	NC_002947	499197 =	94 (1.790)	7 (0.170)	6/198	NT	8.7%	intergenic (+38/‑258)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
	?	NC_002947	499284 =	71 (1.680)					intergenic (+125/‑171)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
*	?	NC_002947	= 507040	81 (1.540)	5 (0.110)	4/220	NT	5.9%	intergenic (+49/+84)	trpE/estP	anthranilate synthase component 1/esterase EstP
	?	NC_002947	= 507074	86 (1.830)					intergenic (+83/+50)	trpE/estP	anthranilate synthase component 1/esterase EstP
*	?	NC_002947	= 529666	NA (NA)	15 (0.300)	9/238	NT	NA	noncoding (2901/2902 nt)	PP_23SC	23S ribosomal RNA
	?	NC_002947	= 529693	NA (NA)					intergenic (+26/‑94)	PP_23SC/PP_5SC	23S ribosomal RNA/5S ribosomal RNA
*	?	NC_002947	= 535046	43 (0.820)	9 (0.190)	5/226	NT	18.3%	intergenic (+28/‑92)	nusG/rplK	transcription antipausing factor NusG/50S ribosomal protein L11
	?	NC_002947	= 535053	41 (0.850)					intergenic (+35/‑85)	nusG/rplK	transcription antipausing factor NusG/50S ribosomal protein L11
*	?	NC_002947	561384 =	60 (1.140)	4 (0.080)	4/224	NT	7.0%	intergenic (+18/‑49)	rpmJ/PP_mr09	50S ribosomal protein L36/Alpha_RBS regulatory region
	?	NC_002947	561412 =	51 (1.070)					intergenic (+46/‑21)	rpmJ/PP_mr09	50S ribosomal protein L36/Alpha_RBS regulatory region
*	?	NC_002947	582184 =	67 (1.270)	5 (0.100)	4/240	NT	7.0%	coding (47/1923 nt)	selB	selenocysteyl‑tRNA‑specific translation elongation factor
	?	NC_002947	582224 =	67 (1.310)					coding (87/1923 nt)	selB	selenocysteyl‑tRNA‑specific translation elongation factor
*	?	NC_002947	= 589980	44 (0.840)	5 (0.100)	5/234	NT	9.8%	coding (101/885 nt)	PP_0500	dTDP‑4‑rhamnose reductase‑like protein
	?	NC_002947	= 589994	50 (1.000)					coding (115/885 nt)	PP_0500	dTDP‑4‑rhamnose reductase‑like protein
*	?	NC_002947	608696 =	56 (1.070)	5 (0.100)	5/236	NT	8.4%	coding (564/813 nt)	PP_0524	cobalamin‑binding protein HutB
	?	NC_002947	608718 =	55 (1.090)					coding (586/813 nt)	PP_0524	cobalamin‑binding protein HutB
*	?	NC_002947	614270 =	40 (0.760)	5 (0.130)	6/184	NT	16.7%	intergenic (‑86/+92)	dxs/ispA	1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase
	?	NC_002947	614348 =	20 (0.510)					intergenic (‑164/+14)	dxs/ispA	1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase
*	?	NC_002947	= 615344	44 (0.840)	5 (0.100)	4/232	NT	10.3%	coding (145/243 nt)	xseB	exodeoxyribonuclease 7 small subunit
	?	NC_002947	= 615356	46 (0.930)					coding (133/243 nt)	xseB	exodeoxyribonuclease 7 small subunit
*	?	NC_002947	623084 =	24 (0.460)	5 (0.100)	4/230	NT	18.4%	intergenic (+33/+129)	PP_0535/PP_0536	ferric siderophore receptor/hypothetical protein
	?	NC_002947	623115 =	22 (0.450)					intergenic (+64/+98)	PP_0535/PP_0536	ferric siderophore receptor/hypothetical protein
*	?	NC_002947	639354 =	62 (1.180)	4 (0.080)	4/240	NT	6.2%	coding (1394/1929 nt)	PP_0551	MORN domain‑containing protein
	?	NC_002947	639380 =	61 (1.190)					coding (1368/1929 nt)	PP_0551	MORN domain‑containing protein
*	?	NC_002947	= 652785	44 (0.840)	32 (0.730)	21/206	NT	63.5%	coding (1961/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	= 4808204	0 (0.000)					intergenic (‑268/‑287)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
*	?	NC_002947	653522 =	76 (1.450)	6 (0.120)	6/234	NT	7.7%	coding (1224/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	653570 =	72 (1.440)					coding (1176/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
*	?	NC_002947	660879 =	52 (0.990)	6 (0.120)	6/228	NT	11.4%	intergenic (+8/‑159)	speA/PP_0568	biosynthetic arginine decarboxylase/hypothetical protein
	?	NC_002947	660923 =	45 (0.920)					intergenic (+52/‑115)	speA/PP_0568	biosynthetic arginine decarboxylase/hypothetical protein
*	?	NC_002947	= 661596	74 (1.410)	5 (0.100)	4/236	NT	6.4%	intergenic (+103/+24)	PP_0568/PP_0569	hypothetical protein/MATE efflux family protein
	?	NC_002947	= 661622	76 (1.510)					coding (1336/1338 nt)	PP_0569	MATE efflux family protein
*	?	NC_002947	668061 =	29 (0.550)	3 (0.070)	3/198	NT	8.9%	intergenic (+22/+130)	yfhM/PP_0571	lipoprotein/membrane protein
	?	NC_002947	668178 =	38 (0.900)					intergenic (+139/+13)	yfhM/PP_0571	lipoprotein/membrane protein
*	?	NC_002947	= 668084	33 (0.630)	4 (0.090)	4/198	NT	11.0%	intergenic (+45/+107)	yfhM/PP_0571	lipoprotein/membrane protein
	?	NC_002947	= 668153	38 (0.900)					intergenic (+114/+38)	yfhM/PP_0571	lipoprotein/membrane protein
*	?	NC_002947	= 675411	55 (1.050)	6 (0.130)	6/224	NT	11.0%	coding (291/696 nt)	PP_0577	hypothetical protein
	?	NC_002947	= 675439	47 (0.980)					coding (263/696 nt)	PP_0577	hypothetical protein
*	?	NC_002947	= 688284	50 (0.950)	4 (0.080)	4/236	NT	7.8%	coding (1146/1182 nt)	ydgK	Bcr/CflA family multidrug resistance transporter
	?	NC_002947	= 688348	46 (0.910)					coding (24/183 nt)	PP_5446	hypothetical protein
*	?	NC_002947	706865 =	45 (0.860)	9 (0.200)	9/214	NT	19.1%	intergenic (+38/+208)	PP_0599/rpsT	paraquat‑inducible protein B/30S ribosomal protein S20
	?	NC_002947	706982 =	37 (0.810)					intergenic (+155/+91)	PP_0599/rpsT	paraquat‑inducible protein B/30S ribosomal protein S20
*	?	NC_002947	= 706880	46 (0.880)	3 (0.070)	3/214	NT	7.2%	intergenic (+53/+193)	PP_0599/rpsT	paraquat‑inducible protein B/30S ribosomal protein S20
	?	NC_002947	= 706965	37 (0.810)					intergenic (+138/+108)	PP_0599/rpsT	paraquat‑inducible protein B/30S ribosomal protein S20
*	?	NC_002947	= 728969	55 (1.050)	6 (0.120)	6/234	NT	10.2%	coding (455/963 nt)	rluD	23S rRNA pseudouridine(1911/1915/1917) synthase
	?	NC_002947	= 728995	53 (1.060)					coding (481/963 nt)	rluD	23S rRNA pseudouridine(1911/1915/1917) synthase
*	?	NC_002947	= 738369	49 (0.930)	5 (0.100)	5/232	NT	9.6%	coding (184/624 nt)	coaE	dephospho‑CoA kinase
	?	NC_002947	= 738398	48 (0.970)					coding (155/624 nt)	coaE	dephospho‑CoA kinase
*	?	NC_002947	= 741601	4 (0.080)	5 (0.100)	4/240	NT	56.2%	intergenic (+198/‑302)	PP_t12/PP_0635	tRNA‑Thr/group II intron‑encoding maturase
	?	NC_002947	= 741676	NA (NA)					intergenic (+273/‑227)	PP_t12/PP_0635	tRNA‑Thr/group II intron‑encoding maturase
*	?	NC_002947	= 742473	NA (NA)	2 (0.040)	4/234	NT	NA	coding (571/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	= 742487	NA (NA)					coding (585/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	742918 =	NA (NA)	11 (0.220)	8/234	NT	NA	coding (1016/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	742948 =	NA (NA)					coding (1046/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	= 743371	NA (NA)	12 (0.240)	9/236	NT	NA	intergenic (+47/+227)	PP_0635/PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
	?	NC_002947	= 743379	NA (NA)					intergenic (+55/+219)	PP_0635/PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
*	?	NC_002947	= 832322	53 (1.010)	6 (0.120)	6/232	NT	10.8%	coding (82/1098 nt)	PP_0716	HlyD family secretion protein
	?	NC_002947	= 832338	49 (0.990)					coding (98/1098 nt)	PP_0716	HlyD family secretion protein
*	?	NC_002947	= 856608	57 (1.080)	4 (0.080)	4/222	NT	7.1%	intergenic (+35/+81)	pagL‑I/PP_0738	lipid A 3‑O‑deacylase/hypothetical protein
	?	NC_002947	= 856642	54 (1.140)					intergenic (+69/+47)	pagL‑I/PP_0738	lipid A 3‑O‑deacylase/hypothetical protein
*	?	NC_002947	861555 =	46 (0.880)	3 (0.060)	3/238	NT	6.3%	coding (210/987 nt)	PP_0742	hypothetical protein
	?	NC_002947	861590 =	45 (0.890)					coding (175/987 nt)	PP_0742	hypothetical protein
*	?	NC_002947	= 867935	67 (1.270)	8 (0.170)	7/220	NT	9.9%	intergenic (+30/+147)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
	?	NC_002947	= 867999	85 (1.810)					intergenic (+94/+83)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
*	?	NC_002947	874287 =	70 (1.330)	3 (0.070)	3/202	NT	5.3%	intergenic (+21/‑138)	PP_0758/PP_0759	hypothetical protein/hypothetical protein
	?	NC_002947	874351 =	50 (1.160)					intergenic (+85/‑74)	PP_0758/PP_0759	hypothetical protein/hypothetical protein
*	?	NC_002947	884638 =	85 (1.620)	5 (0.100)	5/240	NT	5.8%	coding (546/2718 nt)	PP_0767	LuxR family transcriptional regulator
	?	NC_002947	884681 =	79 (1.540)					coding (589/2718 nt)	PP_0767	LuxR family transcriptional regulator
*	?	NC_002947	= 885137	56 (1.070)	3 (0.060)	3/230	NT	5.5%	coding (1045/2718 nt)	PP_0767	LuxR family transcriptional regulator
	?	NC_002947	= 885162	51 (1.040)					coding (1070/2718 nt)	PP_0767	LuxR family transcriptional regulator
*	?	NC_002947	= 929163	73 (1.390)	5 (0.100)	5/240	NT	6.6%	coding (16462/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	= 929197	70 (1.370)					coding (16428/18933 nt)	PP_0806	surface adhesion protein
*	?	NC_002947	948683 =	63 (1.200)	4 (0.080)	4/232	NT	6.8%	coding (1157/1179 nt)	hmp	flavohemoprotein
	?	NC_002947	948725 =	51 (1.030)					intergenic (+20/‑437)	hmp/dsbB	flavohemoprotein/disulfide bond formation protein B
*	?	NC_002947	= 970022	70 (1.330)	6 (0.120)	5/236	NT	8.0%	coding (932/1050 nt)	queA	S‑adenosylmethionine:tRNA ribosyltransferase‑isomerase
	?	NC_002947	= 970059	71 (1.410)					coding (969/1050 nt)	queA	S‑adenosylmethionine:tRNA ribosyltransferase‑isomerase
*	?	NC_002947	975170 =	69 (1.310)	10 (0.200)	10/240	NT	12.6%	intergenic (+16/+153)	ycfJ/suhB	flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase
	?	NC_002947	975250 =	71 (1.380)					intergenic (+96/+73)	ycfJ/suhB	flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase
*	?	NC_002947	1011399 =	79 (1.500)	4 (0.080)	4/226	NT	5.9%	intergenic (‑334/‑193)	PP_0871/prfC	glycine betaine/carnitine/choline ABC transporter permease/peptide chain release factor 3
	?	NC_002947	1011505 =	54 (1.120)					intergenic (‑440/‑87)	PP_0871/prfC	glycine betaine/carnitine/choline ABC transporter permease/peptide chain release factor 3
*	?	NC_002947	1029045 =	56 (1.070)	4 (0.080)	3/232	NT	7.5%	intergenic (‑303/+78)	dppA‑III/PP_0886	dipeptide ABC transporter substrate‑binding protein/hypothetical protein
	?	NC_002947	1029098 =	46 (0.930)					intergenic (‑356/+25)	dppA‑III/PP_0886	dipeptide ABC transporter substrate‑binding protein/hypothetical protein
*	?	NC_002947	= 1037796	51 (0.970)	8 (0.190)	6/200	NT	15.0%	intergenic (+38/+78)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	= 1037828	49 (1.150)					intergenic (+70/+46)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
*	?	NC_002947	1094116 =	57 (1.080)	8 (0.160)	7/234	NT	13.5%	coding (56/465 nt)	ptsN	phosphotransferase system subunit IIA
	?	NC_002947	1094145 =	48 (0.960)					coding (27/465 nt)	ptsN	phosphotransferase system subunit IIA
*	?	NC_002947	= 1102893	52 (0.990)	6 (0.120)	5/230	NT	10.9%	intergenic (+27/‑91)	ttg2E/ttg2F	toluene‑tolerance protein/BolA family protein
	?	NC_002947	= 1102923	49 (1.000)					intergenic (+57/‑61)	ttg2E/ttg2F	toluene‑tolerance protein/BolA family protein
*	?	NC_002947	1103269 =	34 (0.650)	6 (0.120)	5/238	NT	14.5%	coding (23/1266 nt)	murA	UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase
	?	NC_002947	1103298 =	38 (0.750)					coding (52/1266 nt)	murA	UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase
*	?	NC_002947	= 1128317	63 (1.200)	4 (0.080)	4/234	NT	6.2%	coding (1240/2856 nt)	gcvP‑I	glycine dehydrogenase
	?	NC_002947	= 1128332	61 (1.220)					coding (1225/2856 nt)	gcvP‑I	glycine dehydrogenase
*	?	NC_002947	1146416 =	45 (0.860)	3 (0.060)	3/236	NT	7.1%	coding (1653/2589 nt)	PP_1006	heme receptor
	?	NC_002947	1146533 =	35 (0.690)					coding (1536/2589 nt)	PP_1006	heme receptor
*	?	NC_002947	= 1149932	53 (1.010)	6 (0.120) +C	4/244	NT	11.4%	intergenic (‑173/+84)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	2071211 =	41 (0.780)					intergenic (+120/+107)	PP_1846/PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor
*	?	NC_002947	= 1168587	62 (1.180)	3 (0.070)	3/210	NT	5.6%	intergenic (+98/+155)	eda/leuA	KHG/KDPG aldolase/2‑isopropylmalate synthase
	?	NC_002947	= 1168660	49 (1.090)					intergenic (+171/+82)	eda/leuA	KHG/KDPG aldolase/2‑isopropylmalate synthase
*	?	NC_002947	1171724 =	71 (1.350)	4 (0.080)	4/230	NT	6.2%	coding (1335/1380 nt)	xseA	exodeoxyribonuclease 7 large subunit
	?	NC_002947	1171785 =	55 (1.120)					coding (1274/1380 nt)	xseA	exodeoxyribonuclease 7 large subunit
*	?	NC_002947	1181777 =	62 (1.180)	3 (0.060)	3/238	NT	5.2%	coding (824/1407 nt)	cumA	multicopper oxidase
	?	NC_002947	1181813 =	49 (0.960)					coding (860/1407 nt)	cumA	multicopper oxidase
*	?	NC_002947	= 1187301	45 (0.860)	3 (0.060)	3/224	NT	6.8%	coding (2500/3900 nt)	purL	phosphoribosylformylglycinamidine synthase
	?	NC_002947	= 1187350	41 (0.860)					coding (2549/3900 nt)	purL	phosphoribosylformylglycinamidine synthase
*	?	NC_002947	= 1190141	43 (0.820)	4 (0.080)	4/236	NT	8.2%	coding (199/234 nt)	tatA‑I	twin arginine protein export complex subunit
	?	NC_002947	= 1190161	48 (0.950)					coding (179/234 nt)	tatA‑I	twin arginine protein export complex subunit
*	?	NC_002947	1273256 =	92 (1.750)	7 (0.150)	7/216	NT	9.2%	intergenic (+41/+127)	PP_1113/PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
	?	NC_002947	1273345 =	57 (1.240)					intergenic (+130/+38)	PP_1113/PP_1114	pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein
*	?	NC_002947	= 1285024	60 (1.140)	10 (0.190)	10/244	NT	15.0%	coding (249/795 nt)	PP_1122	OmpA family protein
	?	NC_002947	= 1285063	54 (1.040)					coding (288/795 nt)	PP_1122	OmpA family protein
*	?	NC_002947	1297204 =	NA (NA)	12 (0.240)	9/236	NT	NA	coding (386/1329 nt)	PP_1133	transposase
	?	NC_002947	1297224 =	NA (NA)					coding (406/1329 nt)	PP_1133	transposase
*	?	NC_002947	1303123 =	48 (0.910)	5 (0.100)	4/236	NT	9.3%	coding (259/702 nt)	livF‑I	ABC transporter ATP‑binding protein
	?	NC_002947	1303149 =	52 (1.030)					coding (233/702 nt)	livF‑I	ABC transporter ATP‑binding protein
*	?	NC_002947	1311713 =	41 (0.780)	6 (0.130)	6/220	NT	15.7%	intergenic (‑175/+103)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
	?	NC_002947	1311798 =	28 (0.600)					intergenic (‑260/+18)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
*	?	NC_002947	= 1311725	40 (0.760)	8 (0.170)	8/220	NT	20.1%	intergenic (‑187/+91)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
	?	NC_002947	= 1311784	28 (0.600)					intergenic (‑246/+32)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
*	?	NC_002947	1330943 =	NA (NA)	4 (0.080)	3/236	NT	NA	coding (162/1644 nt)	PP_1157	acetolactate synthase
	?	NC_002947	1330987 =	NA (NA)					coding (206/1644 nt)	PP_1157	acetolactate synthase
*	?	NC_002947	1340973 =	54 (1.030)	8 (0.160)	8/238	NT	13.4%	coding (302/870 nt)	PP_1165	hypothetical protein
	?	NC_002947	1340994 =	51 (1.000)					coding (281/870 nt)	PP_1165	hypothetical protein
*	?	NC_002947	1341983 =	52 (0.990)	6 (0.120)	4/236	NT	10.6%	coding (240/924 nt)	PP_1166	DMT superfamily permease
	?	NC_002947	1342010 =	51 (1.010)					coding (213/924 nt)	PP_1166	DMT superfamily permease
*	?	NC_002947	1364735 =	51 (0.970)	3 (0.060)	3/240	NT	6.2%	intergenic (+99/+50)	dctA‑I/PP_1189	C4‑dicarboxylate transport protein/hypothetical protein
	?	NC_002947	1364793 =	41 (0.800)					coding (691/699 nt)	PP_1189	hypothetical protein
*	?	NC_002947	1380493 =	49 (0.930)	5 (0.100) +CTGAC	5/236	NT	11.2%	intergenic (‑213/+49)	PP_1202/PP_t67	phospholipids modification protein/tRNA‑Met
	?	NC_002947	1380748 =	34 (0.650)					intergenic (‑130/+5)	PP_t67/PP_t66	tRNA‑Met/tRNA‑Met
*	?	NC_002947	= 1392920	26 (0.490)	4 (0.110)	4/172	NT	14.3%	intergenic (+84/‑102)	PP_1214/ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
	?	NC_002947	= 1392946	30 (0.820)					intergenic (+110/‑76)	PP_1214/ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
*	?	NC_002947	= 1418455	42 (0.800)	6 (0.120)	6/232	NT	12.6%	intergenic (+16/+83)	PP_t14/PP_1241	tRNA‑Ser/hypothetical protein
	?	NC_002947	= 1418473	44 (0.890)					intergenic (+34/+65)	PP_t14/PP_1241	tRNA‑Ser/hypothetical protein
*	?	NC_002947	1419553 =	16 (0.300)	7 (0.180)	6/182	NT	38.0%	intergenic (‑36/+101)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	1419647 =	11 (0.280)					intergenic (‑130/+7)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1419584	14 (0.270)	6 (0.150)	6/182	NT	36.0%	intergenic (‑67/+70)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	= 1419614	11 (0.280)					intergenic (‑97/+40)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	1426817 =	NA (NA)	4 (0.080)	3/236	NT	NA	coding (708/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	1426858 =	NA (NA)					coding (749/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	= 1426821	NA (NA)	23 (0.460)	10/236	NT	NA	coding (712/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	= 1426852	NA (NA)					coding (743/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	1432037 =	69 (1.310)	4 (0.080)	4/230	NT	5.8%	coding (110/1092 nt)	xenA	protein XenA
	?	NC_002947	1432078 =	65 (1.320)					coding (151/1092 nt)	xenA	protein XenA
*	?	NC_002947	1436018 =	56 (1.070)	5 (0.100)	5/234	NT	9.5%	intergenic (‑48/+105)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
	?	NC_002947	1436109 =	42 (0.840)					intergenic (‑139/+14)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
*	?	NC_002947	1437236 =	65 (1.240)	4 (0.080)	3/238	NT	6.0%	coding (804/927 nt)	prpA	4‑hydroxyproline epimerase
	?	NC_002947	1437267 =	62 (1.220)					coding (773/927 nt)	prpA	4‑hydroxyproline epimerase
*	?	NC_002947	= 1455740	58 (1.100)	5 (0.100)	5/232	NT	8.5%	coding (1267/1455 nt)	PP_1273	multidrug MFS transporter outer membrane protein
	?	NC_002947	= 1455758	53 (1.070)					coding (1285/1455 nt)	PP_1273	multidrug MFS transporter outer membrane protein
*	?	NC_002947	= 1456932	87 (1.660)	6 (0.120)	6/240	NT	6.9%	coding (58/813 nt)	PP_1274	short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	= 1456953	77 (1.500)					coding (37/813 nt)	PP_1274	short‑chain dehydrogenase/reductase family oxidoreductase
*	?	NC_002947	1487013 =	53 (1.010)	6 (0.150)	6/186	NT	17.7%	intergenic (+22/+108)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	1487103 =	16 (0.400)					intergenic (+112/+18)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	1518118 =	52 (0.990)	3 (0.060)	3/236	NT	5.8%	coding (1266/1491 nt)	murE	UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase
	?	NC_002947	1518189 =	48 (0.950)					coding (1337/1491 nt)	murE	UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase
*	?	NC_002947	= 1561261	61 (1.160)	4 (0.080)	4/236	NT	6.5%	coding (872/1875 nt)	pctA	methyl‑accepting chemotaxis protein PctA
	?	NC_002947	= 1561282	56 (1.110)					coding (851/1875 nt)	pctA	methyl‑accepting chemotaxis protein PctA
*	?	NC_002947	1579281 =	41 (0.780)	3 (0.060)	3/238	NT	6.9%	coding (2158/3153 nt)	ttgB	efflux pump membrane protein TtgB
	?	NC_002947	1579308 =	41 (0.810)					coding (2131/3153 nt)	ttgB	efflux pump membrane protein TtgB
*	?	NC_002947	1598856 =	68 (1.290)	8 (0.170)	7/218	NT	14.3%	intergenic (‑53/+78)	dctB/bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
	?	NC_002947	1598894 =	36 (0.770)					intergenic (‑91/+40)	dctB/bglX	C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase
*	?	NC_002947	1623420 =	51 (0.970)	3 (0.060)	3/236	NT	5.7%	intergenic (‑22/+28)	PP_1422/PP_1423	hypothetical protein/hypothetical protein
	?	NC_002947	1623441 =	51 (1.010)					intergenic (‑43/+7)	PP_1422/PP_1423	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1635736	50 (0.950)	5 (0.110)	5/212	NT	8.8%	intergenic (+40/‑130)	era/recO	GTPase Era/DNA repair protein RecO
	?	NC_002947	= 1635806	60 (1.330)					intergenic (+110/‑60)	era/recO	GTPase Era/DNA repair protein RecO
*	?	NC_002947	= 1636094	43 (0.820)	4 (0.080)	4/228	NT	8.8%	coding (229/684 nt)	recO	DNA repair protein RecO
	?	NC_002947	= 1636104	43 (0.880)					coding (239/684 nt)	recO	DNA repair protein RecO
*	?	NC_002947	1650443 =	48 (0.910)	3 (0.060)	3/232	NT	5.4%	coding (659/2043 nt)	PP_1446	TonB‑dependent receptor
	?	NC_002947	1650490 =	59 (1.190)					coding (612/2043 nt)	PP_1446	TonB‑dependent receptor
*	?	NC_002947	1657077 =	50 (0.950)	3 (0.060)	3/230	NT	6.5%	coding (1459/1698 nt)	PP_1450	TPS family activation/secretion protein
	?	NC_002947	1657116 =	40 (0.810)					coding (1420/1698 nt)	PP_1450	TPS family activation/secretion protein
*	?	NC_002947	1666584 =	61 (1.160)	4 (0.080)	4/236	NT	6.0%	coding (187/852 nt)	PP_1460	membrane protein
	?	NC_002947	1666643 =	66 (1.310)					coding (128/852 nt)	PP_1460	membrane protein
*	?	NC_002947	= 1700018	53 (1.010)	6 (0.120)	6/236	NT	10.9%	coding (662/1008 nt)	PP_1494	GGDEF domain‑containing response regulator
	?	NC_002947	= 1700047	47 (0.930)					coding (691/1008 nt)	PP_1494	GGDEF domain‑containing response regulator
*	?	NC_002947	= 1717406	51 (0.970)	7 (0.140)	7/234	NT	11.2%	coding (63/777 nt)	rsmJ	ribosomal RNA small subunit methyltransferase J
	?	NC_002947	= 1717427	63 (1.260)					coding (84/777 nt)	rsmJ	ribosomal RNA small subunit methyltransferase J
*	?	NC_002947	= 1722077	49 (0.930)	3 (0.060)	3/238	NT	6.0%	coding (668/3066 nt)	PP_1517	RND family transporter
	?	NC_002947	= 1722118	47 (0.920)					coding (709/3066 nt)	PP_1517	RND family transporter
*	?	NC_002947	= 1727885	63 (1.200)	5 (0.100)	4/236	NT	7.4%	coding (321/2487 nt)	plsB	glycerol‑3‑phosphate acyltransferase
	?	NC_002947	= 1727900	65 (1.290)					coding (306/2487 nt)	plsB	glycerol‑3‑phosphate acyltransferase
*	?	NC_002947	1731205 =	54 (1.030)	10 (0.250)	7/190	NT	22.8%	intergenic (‑76/+115)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	1731297 =	26 (0.640)					intergenic (‑168/+23)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	= 1739830	53 (1.010)	5 (0.100)	5/234	NT	9.0%	intergenic (‑22/+35)	PP_1534/PP_1535	hypothetical protein/putative Methyltransferase
	?	NC_002947	= 1739838	51 (1.020)					intergenic (‑30/+27)	PP_1534/PP_1535	hypothetical protein/putative Methyltransferase
*	?	NC_002947	1780096 =	28 (0.530)	12 (0.250)	9/222	NT	30.7%	intergenic (+13/+93)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
	?	NC_002947	1780184 =	29 (0.610)					intergenic (+101/+5)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
*	?	NC_002947	= 1780127	31 (0.590)	10 (0.230)	10/208	NT	25.9%	intergenic (+44/+62)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
	?	NC_002947	= 1780151	31 (0.700)					intergenic (+68/+38)	PP_1587/dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
*	?	NC_002947	= 1799915	82 (1.560)	9 (0.210)	6/200	NT	11.4%	intergenic (+43/‑144)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
	?	NC_002947	= 1799957	73 (1.710)					intergenic (+85/‑102)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
*	?	NC_002947	= 1811143	58 (1.100)	3 (0.060)	3/238	NT	5.1%	coding (416/708 nt)	ispD	2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase
	?	NC_002947	= 1811178	55 (1.080)					coding (451/708 nt)	ispD	2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase
*	?	NC_002947	1838113 =	50 (0.950)	3 (0.060)	3/226	NT	5.7%	intergenic (+18/+86)	PP_1642/PP_1643	hypothetical protein/membrane protein
	?	NC_002947	1838195 =	54 (1.120)					intergenic (+100/+4)	PP_1642/PP_1643	hypothetical protein/membrane protein
*	?	NC_002947	= 1862545	53 (1.010)	5 (0.100)	4/238	NT	9.0%	coding (189/1068 nt)	PP_1666	hypothetical protein
	?	NC_002947	= 1862562	50 (0.980)					coding (206/1068 nt)	PP_1666	hypothetical protein
*	?	NC_002947	1899260 =	56 (1.070)	16 (0.350)	10/216	NT	25.2%	intergenic (+288/‑232)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	1899320 =	46 (1.000)					intergenic (+348/‑172)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	= 1899274	56 (1.070)	9 (0.200)	6/216	NT	15.9%	intergenic (+302/‑218)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	= 1899304	46 (1.000)					intergenic (+332/‑188)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	= 1899422	49 (0.930)	7 (0.150)	6/226	NT	13.3%	intergenic (+450/‑70)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	= 1899456	46 (0.950)					intergenic (+484/‑36)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	1906724 =	57 (1.080)	8 (0.190)	7/194	NT	18.4%	intergenic (+22/+106)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
	?	NC_002947	1906818 =	26 (0.630)					intergenic (+116/+12)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
*	?	NC_002947	1908671 =	57 (1.080)	5 (0.100)	4/232	NT	8.7%	coding (622/711 nt)	PP_1709	fumarylacetoacetate hydrolase family protein
	?	NC_002947	1908701 =	51 (1.030)					coding (592/711 nt)	PP_1709	fumarylacetoacetate hydrolase family protein
*	?	NC_002947	1917264 =	60 (1.140)	6 (0.130)	4/224	NT	11.3%	coding (1003/1083 nt)	PP_1718	EAL domain‑containing diguanylate phosphodiesterase
	?	NC_002947	1917343 =	40 (0.840)					coding (924/1083 nt)	PP_1718	EAL domain‑containing diguanylate phosphodiesterase
*	?	NC_002947	1919930 =	48 (0.910)	3 (0.060)	3/232	NT	6.1%	coding (569/2115 nt)	prc	tail‑specific protease Prc
	?	NC_002947	1919965 =	47 (0.950)					coding (534/2115 nt)	prc	tail‑specific protease Prc
*	?	NC_002947	1920762 =	64 (1.220)	7 (0.140)	5/232	NT	11.1%	coding (158/963 nt)	PP_1720	alcohol dehydrogenase
	?	NC_002947	1920783 =	52 (1.050)					coding (179/963 nt)	PP_1720	alcohol dehydrogenase
*	?	NC_002947	1923519 =	68 (1.290)	4 (0.080)	4/240	NT	5.9%	coding (563/795 nt)	PP_1723	2‑aminoethylphosphonate ABC transporter permease
	?	NC_002947	1923543 =	62 (1.210)					coding (539/795 nt)	PP_1723	2‑aminoethylphosphonate ABC transporter permease
*	?	NC_002947	= 1928307	53 (1.010)	4 (0.080)	4/236	NT	7.6%	coding (1827/2154 nt)	PP_1728	membrane protein
	?	NC_002947	= 1928327	46 (0.910)					coding (1807/2154 nt)	PP_1728	membrane protein
*	?	NC_002947	1930420 =	22 (0.420)	9 (0.210)	7/204	NT	38.9%	intergenic (‑45/+60)	PP_1729/apeB	hypothetical protein/M18 family aminopeptidase
	?	NC_002947	1930478 =	10 (0.230)					intergenic (‑103/+2)	PP_1729/apeB	hypothetical protein/M18 family aminopeptidase
*	?	NC_002947	= 1947843	50 (0.950)	3 (0.070)	3/194	NT	6.9%	intergenic (‑61/+109)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
	?	NC_002947	= 1947910	42 (1.020)					intergenic (‑128/+42)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
*	?	NC_002947	1967188 =	11 (0.210)	20 (0.520)	14/180	NT	70.1%	intergenic (+15/+104)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	1967284 =	9 (0.230)					intergenic (+111/+8)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	= 1967220	8 (0.150)	10 (0.260)	6/180	NT	57.4%	intergenic (+47/+72)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	= 1967250	9 (0.230)					intergenic (+77/+42)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	2021755 =	41 (0.780)	4 (0.080)	4/232	NT	9.6%	intergenic (+249/‑190)	PP_1798/gmd	outer membrane efflux protein/GDP‑mannose 4,6‑dehydratase
	?	NC_002947	2021785 =	37 (0.750)					intergenic (+279/‑160)	PP_1798/gmd	outer membrane efflux protein/GDP‑mannose 4,6‑dehydratase
*	?	NC_002947	2048837 =	67 (1.270)	5 (0.110)	5/212	NT	9.0%	intergenic (+33/+106)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	2048928 =	43 (0.950)					intergenic (+124/+15)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
*	?	NC_002947	= 2050638	26 (0.490)	6 (0.160)	5/172	NT	22.2%	intergenic (‑88/+87)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	= 2050674	24 (0.660)					intergenic (‑124/+51)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
*	?	NC_002947	2056006 =	72 (1.370)	3 (0.070)	3/214	NT	5.2%	intergenic (+12/‑131)	aroC/PP_1831	chorismate synthase/membrane protein
	?	NC_002947	2056112 =	47 (1.030)					intergenic (+118/‑25)	aroC/PP_1831	chorismate synthase/membrane protein
*	?	NC_002947	2057843 =	57 (1.080)	4 (0.090)	3/198	NT	7.7%	intergenic (+16/+112)	PP_1832/PP_1833	oxidase/hypothetical protein
	?	NC_002947	2057931 =	50 (1.180)					intergenic (+104/+24)	PP_1832/PP_1833	oxidase/hypothetical protein
*	?	NC_002947	= 2057866	53 (1.010)	6 (0.140)	6/198	NT	11.5%	intergenic (+39/+89)	PP_1832/PP_1833	oxidase/hypothetical protein
	?	NC_002947	= 2057906	50 (1.180)					intergenic (+79/+49)	PP_1832/PP_1833	oxidase/hypothetical protein
*	?	NC_002947	= 2061681	65 (1.240)	8 (0.160)	7/234	NT	11.4%	coding (553/2058 nt)	PP_1838	membrane protein
	?	NC_002947	= 2061693	63 (1.260)					coding (565/2058 nt)	PP_1838	membrane protein
*	?	NC_002947	2071205 =	41 (0.780)	5 (0.110)	4/210	NT	12.5%	intergenic (+114/+113)	PP_1846/PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor
	?	NC_002947	2071278 =	35 (0.780)					intergenic (+187/+40)	PP_1846/PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor
*	?	NC_002947	2071951 =	73 (1.390)	6 (0.120)	5/232	NT	8.5%	coding (1500/2133 nt)	PP_1847	TonB‑dependent ferric siderophore receptor
	?	NC_002947	2071986 =	60 (1.210)					coding (1465/2133 nt)	PP_1847	TonB‑dependent ferric siderophore receptor
*	?	NC_002947	2078275 =	55 (1.050)	6 (0.120)	6/232	NT	11.0%	intergenic (+17/+98)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
	?	NC_002947	2078372 =	45 (0.910)					intergenic (+114/+1)	PP_1853/PP_1854	LysR family transcriptional regulator/hypothetical protein
*	?	NC_002947	2086286 =	NA (NA)	7 (0.140)	7/230	NT	NA	coding (358/1302 nt)	PP_1865	transposase
	?	NC_002947	2086348 =	NA (NA)					coding (420/1302 nt)	PP_1865	transposase
*	?	NC_002947	= 2086293	NA (NA)	4 (0.080)	4/230	NT	NA	coding (365/1302 nt)	PP_1865	transposase
	?	NC_002947	= 2086339	NA (NA)					coding (411/1302 nt)	PP_1865	transposase
*	?	NC_002947	= 2087064	NA (NA)	11 (0.220)	10/236	NT	NA	coding (1136/1302 nt)	PP_1865	transposase
	?	NC_002947	= 2087083	NA (NA)					coding (1155/1302 nt)	PP_1865	transposase
*	?	NC_002947	= 2087819	63 (1.200)	10 (0.190)	7/244	NT	13.8%	intergenic (+589/+329)	PP_1865/aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
	?	NC_002947	= 2087842	NA (NA)					intergenic (+612/+306)	PP_1865/aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
*	?	NC_002947	= 2087843	64 (1.220)	8 (0.150)	3/246	NT	11.1%	intergenic (+613/+305)	PP_1865/aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
	?	NC_002947	= 4022425	NA (NA)					intergenic (‑76/+592)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
*	?	NC_002947	2100003 =	37 (0.700)	7 (0.160)	6/200	NT	17.9%	intergenic (‑71/‑134)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	2100098 =	34 (0.800)					intergenic (‑166/‑39)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	= 2100025	37 (0.700)	13 (0.300)	12/200	NT	28.9%	intergenic (‑93/‑112)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	= 2100074	34 (0.800)					intergenic (‑142/‑63)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	2130430 =	42 (0.800)	4 (0.080)	4/230	NT	9.4%	coding (1812/2496 nt)	fimD	type I pili subunit FimD
	?	NC_002947	2130464 =	38 (0.770)					coding (1778/2496 nt)	fimD	type I pili subunit FimD
*	?	NC_002947	= 2138020	50 (0.950)	4 (0.080)	4/242	NT	7.5%	coding (80/933 nt)	yadG	ABC transporter ATP‑binding protein
	?	NC_002947	= 2138037	50 (0.970)					coding (97/933 nt)	yadG	ABC transporter ATP‑binding protein
*	?	NC_002947	2143400 =	52 (0.990)	4 (0.080)	4/234	NT	7.4%	coding (137/435 nt)	PP_1899	ExbD/TolR family protein
	?	NC_002947	2143445 =	51 (1.020)					coding (182/435 nt)	PP_1899	ExbD/TolR family protein
*	?	NC_002947	= 2145840	44 (0.840)	5 (0.100)	5/232	NT	10.1%	coding (151/465 nt)	etp	phosphotyrosine‑protein phosphatase
	?	NC_002947	= 2145863	48 (0.970)					coding (174/465 nt)	etp	phosphotyrosine‑protein phosphatase
*	?	NC_002947	2229043 =	51 (0.970)	3 (0.060)	3/228	NT	6.6%	coding (136/783 nt)	ycfH	tRNA D‑aminoacylase
	?	NC_002947	2229110 =	38 (0.780)					coding (203/783 nt)	ycfH	tRNA D‑aminoacylase
*	?	NC_002947	= 2255163	55 (1.050)	6 (0.120)	6/238	NT	10.2%	coding (293/1113 nt)	asd	aspartate‑semialdehyde dehydrogenase
	?	NC_002947	= 2255188	52 (1.020)					coding (318/1113 nt)	asd	aspartate‑semialdehyde dehydrogenase
*	?	NC_002947	= 2266226	44 (0.840)	4 (0.080)	4/240	NT	8.6%	coding (1243/1311 nt)	folC	bifunctional folypolyglutamate synthase/dihydrofolate synthase
	?	NC_002947	= 2266255	42 (0.820)					coding (1272/1311 nt)	folC	bifunctional folypolyglutamate synthase/dihydrofolate synthase
*	?	NC_002947	= 2283063	67 (1.270)	6 (0.120)	5/238	NT	8.2%	coding (795/978 nt)	PP_2011	hypothetical protein
	?	NC_002947	= 2283074	70 (1.380)					coding (784/978 nt)	PP_2011	hypothetical protein
*	?	NC_002947	2295818 =	38 (0.720)	5 (0.120)	3/198	NT	12.4%	intergenic (+21/+112)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	2295903 =	40 (0.950)					intergenic (+106/+27)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	= 2295841	36 (0.680)	9 (0.210)	6/198	NT	20.7%	intergenic (+44/+89)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	= 2295878	40 (0.950)					intergenic (+81/+52)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	2308081 =	74 (1.410)	5 (0.100)	5/234	NT	7.0%	coding (79/495 nt)	PP_2030	hypothetical protein
	?	NC_002947	2308104 =	62 (1.240)					coding (56/495 nt)	PP_2030	hypothetical protein
*	?	NC_002947	= 2314872	67 (1.270)	5 (0.100)	5/234	NT	7.2%	coding (296/888 nt)	PP_2036	4‑hydroxy‑tetrahydrodipicolinate synthase
	?	NC_002947	= 2314907	66 (1.320)					coding (261/888 nt)	PP_2036	4‑hydroxy‑tetrahydrodipicolinate synthase
*	?	NC_002947	2340035 =	40 (0.760)	3 (0.060)	3/232	NT	7.1%	coding (634/1308 nt)	dctA‑II	C4‑dicarboxylate transport protein
	?	NC_002947	2340072 =	41 (0.830)					coding (671/1308 nt)	dctA‑II	C4‑dicarboxylate transport protein
*	?	NC_002947	= 2346852	60 (1.140)	5 (0.100)	5/234	NT	7.5%	coding (110/1098 nt)	PP_2064	multidrug RND transporter membrane fusion protein
	?	NC_002947	= 2346870	66 (1.320)					coding (128/1098 nt)	PP_2064	multidrug RND transporter membrane fusion protein
*	?	NC_002947	2361857 =	57 (1.080)	4 (0.080)	3/236	NT	6.9%	coding (2063/2724 nt)	PP_2076	hypothetical protein
	?	NC_002947	2361885 =	54 (1.070)					coding (2035/2724 nt)	PP_2076	hypothetical protein
*	?	NC_002947	= 2365763	49 (0.930)	3 (0.060)	3/236	NT	5.7%	coding (156/906 nt)	lysR	transcriptional regulator LysR
	?	NC_002947	= 2365793	52 (1.030)					coding (186/906 nt)	lysR	transcriptional regulator LysR
*	?	NC_002947	= 2407020	67 (1.270)	4 (0.090) +GTTCCGCGTTGCCTGC	3/214	NT	5.9%	intergenic (+232/+22)	PP_2110/PP_2111	ribosomal large subunit pseudouridine synthase/aerotaxis receptor
	?	NC_002947	4266629 =	80 (1.520)					intergenic (‑127/+19)	PP_3738/galP‑IV	transcriptional regulator VanR/porin‑like protein
*	?	NC_002947	2410758 =	50 (0.950)	3 (0.060)	3/232	NT	6.2%	coding (733/2742 nt)	acnA‑I	aconitate hydratase
	?	NC_002947	2410803 =	44 (0.890)					coding (688/2742 nt)	acnA‑I	aconitate hydratase
*	?	NC_002947	= 2412899	74 (1.410)	6 (0.120)	5/236	NT	8.3%	intergenic (+120/‑301)	rlmM/PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
	?	NC_002947	4909938 =	61 (1.210)					intergenic (+286/+193)	PP_4318/PP_4319	transposase/hypothetical protein
*	?	NC_002947	2414780 =	37 (0.700)	8 (0.160)	6/230	NT	16.1%	intergenic (+279/‑66)	PP_2114/PP_2115	transposase/hypothetical protein
	?	NC_002947	= 4908042	49 (1.000)					coding (28/198 nt)	PP_4317	hypothetical protein
*	?	NC_002947	= 2431225	47 (0.890)	6 (0.120)	6/236	NT	12.4%	coding (775/1974 nt)	PP_2130	lytic transglycosylase
	?	NC_002947	= 2431246	40 (0.790)					coding (754/1974 nt)	PP_2130	lytic transglycosylase
*	?	NC_002947	= 2436663	56 (1.070)	3 (0.060)	3/226	NT	5.1%	intergenic (+198/‑461)	PP_2134/fadB	transposase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase
	?	NC_002947	= 2436698	61 (1.260)					intergenic (+233/‑426)	PP_2134/fadB	transposase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase
*	?	NC_002947	2471529 =	48 (0.910)	6 (0.120)	5/242	NT	11.3%	coding (1051/1182 nt)	PP_2165	two‑component system response regulator
	?	NC_002947	2471558 =	47 (0.910)					coding (1080/1182 nt)	PP_2165	two‑component system response regulator
*	?	NC_002947	2472145 =	20 (0.380)	4 (0.110)	4/168	NT	20.7%	intergenic (+6/+143)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
	?	NC_002947	2472269 =	17 (0.480)					intergenic (+130/+19)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
*	?	NC_002947	= 2472183	18 (0.340)	12 (0.340)	8/168	NT	45.1%	intergenic (+44/+105)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
	?	NC_002947	= 2472229	17 (0.480)					intergenic (+90/+59)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
*	?	NC_002947	2494230 =	33 (0.630)	3 (0.060)	3/224	NT	9.4%	coding (451/864 nt)	PP_2187	universal stress protein family protein
	?	NC_002947	2494274 =	28 (0.590)					coding (407/864 nt)	PP_2187	universal stress protein family protein
*	?	NC_002947	2505907 =	54 (1.030)	7 (0.140)	7/228	NT	12.8%	coding (464/1107 nt)	PP_2199	hypothetical protein
	?	NC_002947	2505947 =	45 (0.920)					coding (504/1107 nt)	PP_2199	hypothetical protein
*	?	NC_002947	= 2508407	43 (0.820)	5 (0.100)	5/234	NT	10.4%	coding (323/438 nt)	PP_2202	membrane protein
	?	NC_002947	= 2508421	45 (0.900)					coding (309/438 nt)	PP_2202	membrane protein
*	?	NC_002947	2518405 =	76 (1.450)	7 (0.140)	4/238	NT	8.1%	coding (782/1023 nt)	PP_2211	AraC family transcriptional regulator
	?	NC_002947	2518427 =	85 (1.670)					coding (804/1023 nt)	PP_2211	AraC family transcriptional regulator
*	?	NC_002947	2526004 =	50 (0.950)	4 (0.080)	4/236	NT	7.9%	coding (205/1194 nt)	PP_2215	acetyl‑CoA acetyltransferase
	?	NC_002947	2526033 =	45 (0.890)					coding (234/1194 nt)	PP_2215	acetyl‑CoA acetyltransferase
*	?	NC_002947	2569524 =	61 (1.160)	7 (0.140)	7/238	NT	10.6%	coding (67/1050 nt)	PP_2252	hypothetical protein
	?	NC_002947	2569546 =	59 (1.160)					coding (45/1050 nt)	PP_2252	hypothetical protein
*	?	NC_002947	2574385 =	66 (1.260)	4 (0.080)	4/234	NT	5.9%	coding (1098/1566 nt)	PP_2257	aerotaxis receptor
	?	NC_002947	2574435 =	65 (1.300)					coding (1148/1566 nt)	PP_2257	aerotaxis receptor
*	?	NC_002947	2577157 =	42 (0.800)	4 (0.080)	4/224	NT	9.5%	coding (1281/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
	?	NC_002947	2577227 =	38 (0.790)					coding (1211/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
*	?	NC_002947	= 2577167	43 (0.820)	6 (0.130)	4/224	NT	13.5%	coding (1271/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 2577215	38 (0.790)					coding (1223/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
*	?	NC_002947	= 2601959	51 (0.970)	4 (0.080)	4/242	NT	7.0%	coding (1393/1575 nt)	PP_2279	head‑to‑tail joining protein
	?	NC_002947	= 2601977	56 (1.080)					coding (1411/1575 nt)	PP_2279	head‑to‑tail joining protein
*	?	NC_002947	2651868 =	64 (1.220)	4 (0.080)	4/238	NT	5.5%	coding (593/1113 nt)	aroF‑I	tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
	?	NC_002947	2651914 =	75 (1.480)					coding (547/1113 nt)	aroF‑I	tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
*	?	NC_002947	2660074 =	50 (0.950)	5 (0.100)	4/228	NT	9.7%	coding (305/1536 nt)	PP_2331	membrane protein
	?	NC_002947	2660112 =	47 (0.970)					coding (267/1536 nt)	PP_2331	membrane protein
*	?	NC_002947	= 2664074	45 (0.860)	5 (0.120)	5/198	NT	11.2%	intergenic (+56/‑107)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase
	?	NC_002947	= 2664107	43 (1.020)					intergenic (+89/‑74)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase
*	?	NC_002947	2678319 =	45 (0.860)	4 (0.080)	4/234	NT	8.3%	coding (617/1320 nt)	PP_2348	sensor histidine kinase
	?	NC_002947	2678340 =	46 (0.920)					coding (638/1320 nt)	PP_2348	sensor histidine kinase
*	?	NC_002947	2693123 =	41 (0.780)	3 (0.060)	3/236	NT	6.5%	coding (178/795 nt)	PP_2361	chaperone protein
	?	NC_002947	2693162 =	47 (0.930)					coding (217/795 nt)	PP_2361	chaperone protein
*	?	NC_002947	2696924 =	46 (0.880)	3 (0.060)	3/232	NT	6.9%	coding (782/972 nt)	PP_2363	hypothetical protein
	?	NC_002947	2697012 =	37 (0.750)					coding (870/972 nt)	PP_2363	hypothetical protein
*	?	NC_002947	2723815 =	63 (1.200)	9 (0.190)	7/226	NT	15.4%	coding (131/315 nt)	PP_2384	membrane protein
	?	NC_002947	2723852 =	41 (0.850)					coding (94/315 nt)	PP_2384	membrane protein
*	?	NC_002947	2743625 =	58 (1.100)	5 (0.100)	5/230	NT	9.3%	intergenic (+21/‑54)	PP_2397/PP_2398	EF hand domain‑containing protein/hypothetical protein
	?	NC_002947	2743662 =	43 (0.880)					intergenic (+58/‑17)	PP_2397/PP_2398	EF hand domain‑containing protein/hypothetical protein
*	?	NC_002947	= 2773866	52 (0.990)	3 (0.060)	3/234	NT	6.0%	coding (827/1053 nt)	calA	coniferyl alcohol dehydrogenase
	?	NC_002947	= 2773912	45 (0.900)					coding (873/1053 nt)	calA	coniferyl alcohol dehydrogenase
*	?	NC_002947	= 2775110	61 (1.160)	4 (0.080)	4/238	NT	6.7%	coding (445/1353 nt)	PP_5521	hypothetical protein
	?	NC_002947	= 2775127	53 (1.040)					coding (428/1353 nt)	PP_5521	hypothetical protein
*	?	NC_002947	= 2794968	67 (1.270)	6 (0.120)	6/242	NT	7.9%	intergenic (+33/+79)	PP_2447/puuB	hypothetical protein/gamma‑glutamylputrescine oxidase
	?	NC_002947	= 2795013	74 (1.430)					intergenic (+78/+34)	PP_2447/puuB	hypothetical protein/gamma‑glutamylputrescine oxidase
*	?	NC_002947	2808398 =	51 (0.970)	4 (0.080)	4/232	NT	8.2%	coding (356/375 nt)	PP_2462	hypothetical protein
	?	NC_002947	2808428 =	41 (0.830)					intergenic (+11/+141)	PP_2462/PP_mr35	hypothetical protein/cspA regulatory region
*	?	NC_002947	2813357 =	48 (0.910)	7 (0.140)	5/234	NT	13.8%	coding (499/1017 nt)	pheS	phenylalanine‑‑tRNA ligase subunit alpha
	?	NC_002947	2813386 =	42 (0.840)					coding (528/1017 nt)	pheS	phenylalanine‑‑tRNA ligase subunit alpha
*	?	NC_002947	2832716 =	69 (1.310)	10 (0.200)	8/232	NT	14.1%	intergenic (‑21/+46)	PP_2485/PP_2486	hypothetical protein/Oye family NADH‑dependent flavin oxidoreductase
	?	NC_002947	2832764 =	57 (1.150)					coding (1123/1125 nt)	PP_2486	Oye family NADH‑dependent flavin oxidoreductase
*	?	NC_002947	= 2844916	48 (0.910)	5 (0.100)	4/230	NT	9.3%	coding (876/1029 nt)	PP_2496	hypothetical protein
	?	NC_002947	= 2844947	53 (1.080)					coding (845/1029 nt)	PP_2496	hypothetical protein
*	?	NC_002947	2844960 =	55 (1.050)	4 (0.080)	4/234	NT	6.9%	coding (832/1029 nt)	PP_2496	hypothetical protein
	?	NC_002947	2845004 =	56 (1.120)					coding (788/1029 nt)	PP_2496	hypothetical protein
*	?	NC_002947	2850023 =	55 (1.050)	4 (0.080)	4/236	NT	7.2%	coding (116/927 nt)	PP_2502	LysR family transcriptional regulator
	?	NC_002947	2850064 =	51 (1.010)					coding (75/927 nt)	PP_2502	LysR family transcriptional regulator
*	?	NC_002947	= 2872929	62 (1.180)	6 (0.120)	6/232	NT	8.9%	coding (189/1164 nt)	PP_2525	hypothetical protein
	?	NC_002947	= 2872955	64 (1.290)					coding (163/1164 nt)	PP_2525	hypothetical protein
*	?	NC_002947	= 2894634	38 (0.720)	7 (0.140)	6/240	NT	14.4%	coding (250/1392 nt)	PP_2549	hypothetical protein
	?	NC_002947	= 2894650	46 (0.900)					coding (266/1392 nt)	PP_2549	hypothetical protein
*	?	NC_002947	= 2915342	52 (0.990)	3 (0.060)	3/236	NT	5.9%	coding (4319/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin
	?	NC_002947	= 2915372	46 (0.910)					coding (4349/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin
*	?	NC_002947	2924275 =	46 (0.880)	3 (0.060)	3/232	NT	6.0%	coding (1021/2772 nt)	PP_2563	antibiotic biosynthesis protein
	?	NC_002947	2924307 =	50 (1.010)					coding (989/2772 nt)	PP_2563	antibiotic biosynthesis protein
*	?	NC_002947	2926918 =	58 (1.100)	6 (0.120)	5/232	NT	10.0%	coding (142/2472 nt)	PP_2565	UvrD/REP family helicase
	?	NC_002947	2926957 =	53 (1.070)					coding (181/2472 nt)	PP_2565	UvrD/REP family helicase
*	?	NC_002947	2927194 =	61 (1.160)	6 (0.110)	6/246	NT	9.0%	coding (418/2472 nt)	PP_2565	UvrD/REP family helicase
	?	NC_002947	2927229 =	60 (1.140)					coding (453/2472 nt)	PP_2565	UvrD/REP family helicase
*	?	NC_002947	2931522 =	60 (1.140)	4 (0.080)	3/226	NT	7.2%	coding (2623/4890 nt)	PP_2566	leucine‑rich repeat‑containing protein
	?	NC_002947	2931613 =	48 (0.990)					coding (2532/4890 nt)	PP_2566	leucine‑rich repeat‑containing protein
*	?	NC_002947	2937810 =	NA (NA)	12 (0.240)	9/236	NT	NA	coding (1288/1329 nt)	PP_2570	transposase
	?	NC_002947	2937843 =	NA (NA)					coding (1255/1329 nt)	PP_2570	transposase
*	?	NC_002947	2957113 =	46 (0.880)	6 (0.120)	5/244	NT	11.0%	intergenic (+25/‑171)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
	?	NC_002947	2957204 =	51 (0.980)					intergenic (+116/‑80)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
*	?	NC_002947	= 2958272	62 (1.180)	5 (0.100)	5/230	NT	8.6%	coding (989/1494 nt)	PP_2589	aldehyde dehydrogenase family protein
	?	NC_002947	= 2958316	49 (1.000)					coding (1033/1494 nt)	PP_2589	aldehyde dehydrogenase family protein
*	?	NC_002947	2961076 =	56 (1.070)	4 (0.080)	4/236	NT	6.9%	coding (159/2316 nt)	PP_2590	ferric siderophore receptor
	?	NC_002947	2961116 =	55 (1.090)					coding (119/2316 nt)	PP_2590	ferric siderophore receptor
*	?	NC_002947	2982452 =	51 (0.970)	3 (0.060)	3/234	NT	5.6%	coding (770/810 nt)	PP_2608	shikimate dehydrogenase family protein
	?	NC_002947	2982485 =	53 (1.060)					coding (737/810 nt)	PP_2608	shikimate dehydrogenase family protein
*	?	NC_002947	= 2996201	40 (0.760)	5 (0.100)	5/238	NT	12.9%	coding (686/1017 nt)	PP_2620	hypothetical protein
	?	NC_002947	= 2996224	29 (0.570)					coding (663/1017 nt)	PP_2620	hypothetical protein
*	?	NC_002947	= 3023014	43 (0.820)	6 (0.120)	6/234	NT	13.4%	coding (3509/3519 nt)	PP_2638	cellulose synthase operon protein C
	?	NC_002947	= 3023030	37 (0.740)					intergenic (+6/‑332)	PP_2638/dapA‑II	cellulose synthase operon protein C/4‑hydroxy‑tetrahydrodipicolinate synthase
*	?	NC_002947	3036491 =	45 (0.860)	5 (0.100)	3/238	NT	10.7%	intergenic (‑38/+197)	PP_2648/PP_2649	universal stress protein family protein/LysR family transcriptional regulator
	?	NC_002947	3036523 =	40 (0.790)					intergenic (‑70/+165)	PP_2648/PP_2649	universal stress protein family protein/LysR family transcriptional regulator
*	?	NC_002947	3038086 =	55 (1.050)	4 (0.080)	4/234	NT	7.4%	coding (315/1143 nt)	gbd	4‑hydroxybutyrate dehydrogenase
	?	NC_002947	3038112 =	48 (0.960)					coding (341/1143 nt)	gbd	4‑hydroxybutyrate dehydrogenase
*	?	NC_002947	= 3039864	38 (0.720)	3 (0.060)	3/240	NT	7.5%	coding (906/1344 nt)	PP_2651	MFS transporter
	?	NC_002947	= 3039918	37 (0.720)					coding (960/1344 nt)	PP_2651	MFS transporter
*	?	NC_002947	= 3052093	53 (1.010)	4 (0.080)	3/238	NT	7.4%	coding (750/1899 nt)	PP_2664	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 3052110	49 (0.960)					coding (767/1899 nt)	PP_2664	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	= 3057644	45 (0.860)	4 (0.080)	4/238	NT	7.9%	coding (971/1194 nt)	PP_5538	ABC transporter substrate‑binding protein
	?	NC_002947	= 3057687	50 (0.980)					coding (928/1194 nt)	PP_5538	ABC transporter substrate‑binding protein
*	?	NC_002947	3078868 =	49 (0.930)	3 (0.060)	3/226	NT	6.3%	coding (441/1410 nt)	PP_2688	hypothetical protein
	?	NC_002947	3078940 =	44 (0.910)					coding (369/1410 nt)	PP_2688	hypothetical protein
*	?	NC_002947	3100052 =	40 (0.760)	4 (0.080)	4/232	NT	9.6%	coding (788/1470 nt)	PP_2709	long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	3100119 =	38 (0.770)					coding (855/1470 nt)	PP_2709	long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 3129427	39 (0.740)	4 (0.080)	4/226	NT	9.0%	coding (631/1410 nt)	dmoA‑I	dimethyl‑sulfide monooxygenase
	?	NC_002947	= 3129506	45 (0.930)					coding (710/1410 nt)	dmoA‑I	dimethyl‑sulfide monooxygenase
*	?	NC_002947	= 3135695	40 (0.760)	4 (0.080)	3/236	NT	10.0%	coding (305/1335 nt)	PP_2752	hypothetical protein
	?	NC_002947	= 3135723	34 (0.670)					coding (333/1335 nt)	PP_2752	hypothetical protein
*	?	NC_002947	3216579 =	56 (1.070)	5 (0.100)	4/238	NT	8.5%	coding (2451/3129 nt)	mexD	multidrug RND transporter MexD
	?	NC_002947	3216615 =	54 (1.060)					coding (2487/3129 nt)	mexD	multidrug RND transporter MexD
*	?	NC_002947	3217070 =	55 (1.050)	7 (0.140)	4/234	NT	11.2%	coding (2942/3129 nt)	mexD	multidrug RND transporter MexD
	?	NC_002947	3217105 =	59 (1.180)					coding (2977/3129 nt)	mexD	multidrug RND transporter MexD
*	?	NC_002947	= 3219398	63 (1.200)	5 (0.100)	5/228	NT	7.5%	intergenic (‑98/+80)	nfxB/PP_2821	HTH‑type transcriptional regulator NfxB/hypothetical protein
	?	NC_002947	= 3219419	65 (1.340)					intergenic (‑119/+59)	nfxB/PP_2821	HTH‑type transcriptional regulator NfxB/hypothetical protein
*	?	NC_002947	= 3246271	50 (0.950)	5 (0.100)	4/240	NT	9.2%	coding (483/879 nt)	PP_2841	site‑specific recombinase
	?	NC_002947	= 3246295	50 (0.980)					coding (507/879 nt)	PP_2841	site‑specific recombinase
*	?	NC_002947	3292424 =	70 (1.330)	5 (0.100)	4/236	NT	6.9%	coding (1665/3675 nt)	PP_2893	hypothetical protein
	?	NC_002947	3292456 =	68 (1.350)					coding (1697/3675 nt)	PP_2893	hypothetical protein
*	?	NC_002947	= 3295042	54 (1.030)	4 (0.080)	4/230	NT	7.1%	intergenic (‑34/+42)	PP_2894/PP_2895	hypothetical protein/hypothetical protein
	?	NC_002947	= 3295053	54 (1.100)					intergenic (‑45/+31)	PP_2894/PP_2895	hypothetical protein/hypothetical protein
*	?	NC_002947	3299203 =	53 (1.010)	4 (0.080)	4/236	NT	7.4%	coding (1377/2319 nt)	pvdQ	acyl‑homoserine lactone acylase PvdQ
	?	NC_002947	3299227 =	50 (0.990)					coding (1401/2319 nt)	pvdQ	acyl‑homoserine lactone acylase PvdQ
*	?	NC_002947	3309608 =	42 (0.800)	4 (0.080)	4/234	NT	9.0%	coding (680/1251 nt)	lhgO	L‑2‑hydroxyglutarate oxidase
	?	NC_002947	3309624 =	41 (0.820)					coding (696/1251 nt)	lhgO	L‑2‑hydroxyglutarate oxidase
*	?	NC_002947	= 3311677	56 (1.070)	4 (0.080)	4/238	NT	7.2%	coding (1348/1392 nt)	gabP‑III	gamma‑aminobutyrate permease
	?	NC_002947	= 3311700	49 (0.960)					coding (1371/1392 nt)	gabP‑III	gamma‑aminobutyrate permease
*	?	NC_002947	= 3311677	56 (1.070)	3 (0.060)	3/234	NT	5.5%	coding (1348/1392 nt)	gabP‑III	gamma‑aminobutyrate permease
	?	NC_002947	= 3311712	50 (1.000)					coding (1383/1392 nt)	gabP‑III	gamma‑aminobutyrate permease
*	?	NC_002947	= 3332982	49 (0.930)	3 (0.060)	3/238	NT	5.4%	coding (166/918 nt)	PP_2930	L‑serine dehydratase
	?	NC_002947	= 3333036	57 (1.120)					coding (112/918 nt)	PP_2930	L‑serine dehydratase
*	?	NC_002947	3339160 =	40 (0.760)	3 (0.070)	3/202	NT	6.9%	intergenic (‑119/+124)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase
	?	NC_002947	3339248 =	48 (1.110)					intergenic (‑207/+36)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase
*	?	NC_002947	= 3339181	40 (0.760)	4 (0.090)	4/202	NT	9.0%	intergenic (‑140/+103)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase
	?	NC_002947	= 3339225	48 (1.110)					intergenic (‑184/+59)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase
*	?	NC_002947	3397200 =	72 (1.370)	7 (0.140)	6/232	NT	9.3%	coding (867/1233 nt)	PP_3001	CAIB/BAIF family protein
	?	NC_002947	3397226 =	69 (1.390)					coding (893/1233 nt)	PP_3001	CAIB/BAIF family protein
*	?	NC_002947	= 3434911	69 (1.310)	9 (0.180)	9/232	NT	11.9%	coding (103/327 nt)	gpW	baseplate protein
	?	NC_002947	= 3434935	68 (1.370)					coding (127/327 nt)	gpW	baseplate protein
*	?	NC_002947	= 3441520	56 (1.070)	4 (0.080)	4/238	NT	7.3%	coding (236/3270 nt)	PP_3062	tail length determination protein
	?	NC_002947	= 3441546	48 (0.940)					coding (262/3270 nt)	PP_3062	tail length determination protein
*	?	NC_002947	= 3464323	55 (1.050)	5 (0.120)	5/198	NT	8.8%	coding (78/1929 nt)	PP_3078	ABC transporter substrate‑binding protein
	?	NC_002947	= 3464362	60 (1.420)					coding (39/1929 nt)	PP_3078	ABC transporter substrate‑binding protein
*	?	NC_002947	= 3472643	56 (1.070)	4 (0.080)	3/232	NT	6.4%	intergenic (‑69/+39)	PP_3084/PP_3085	ferric siderophore receptor/transmembrane sensor
	?	NC_002947	= 3472685	64 (1.290)					coding (963/966 nt)	PP_3085	transmembrane sensor
*	?	NC_002947	3478133 =	46 (0.880)	3 (0.060)	3/234	NT	6.5%	coding (514/543 nt)	PP_3089	hypothetical protein
	?	NC_002947	3478187 =	42 (0.840)					coding (460/543 nt)	PP_3089	hypothetical protein
*	?	NC_002947	= 3482837	53 (1.010)	5 (0.100)	4/234	NT	8.7%	coding (3130/3804 nt)	PP_3091	membrane protein
	?	NC_002947	= 3482870	55 (1.100)					coding (3097/3804 nt)	PP_3091	membrane protein
*	?	NC_002947	3514136 =	58 (1.100)	6 (0.120)	4/238	NT	9.7%	coding (2761/4158 nt)	PP_3108	rhs family protein
	?	NC_002947	3514155 =	55 (1.080)					coding (2780/4158 nt)	PP_3108	rhs family protein
*	?	NC_002947	= 3581719	52 (0.990)	4 (0.080)	4/228	NT	7.3%	coding (772/942 nt)	PP_3160	hypothetical protein
	?	NC_002947	= 3581735	53 (1.090)					coding (788/942 nt)	PP_3160	hypothetical protein
*	?	NC_002947	= 3612528	50 (0.950)	3 (0.060)	3/234	NT	5.6%	coding (1199/3396 nt)	mcoA	Mn(II) copper oxidase A
	?	NC_002947	= 3612563	53 (1.060)					coding (1164/3396 nt)	mcoA	Mn(II) copper oxidase A
*	?	NC_002947	3632935 =	52 (0.990)	4 (0.080)	4/246	NT	7.7%	coding (364/1062 nt)	PP_3201	BNR domain‑containing protein
	?	NC_002947	3633003 =	44 (0.840)					coding (432/1062 nt)	PP_3201	BNR domain‑containing protein
*	?	NC_002947	3642161 =	70 (1.330)	5 (0.100)	5/232	NT	8.0%	coding (1087/1431 nt)	PP_3209	isoxanthopterin deaminase
	?	NC_002947	3642226 =	49 (0.990)					coding (1022/1431 nt)	PP_3209	isoxanthopterin deaminase
*	?	NC_002947	3656930 =	57 (1.080)	4 (0.080)	4/244	NT	6.6%	coding (411/909 nt)	PP_3221	ABC transporter permease
	?	NC_002947	3656963 =	57 (1.090)					coding (378/909 nt)	PP_3221	ABC transporter permease
*	?	NC_002947	= 3665840	49 (0.930)	5 (0.100)	3/238	NT	9.3%	coding (705/957 nt)	PP_3229	aliphatic sulfonate‑binding protein
	?	NC_002947	= 3665854	50 (0.980)					coding (719/957 nt)	PP_3229	aliphatic sulfonate‑binding protein
*	?	NC_002947	3666262 =	46 (0.880)	5 (0.100)	4/234	NT	10.9%	intergenic (+170/‑146)	PP_3229/PP_3230	aliphatic sulfonate‑binding protein/phosphoribosyl transferase domain‑containing protein
	?	NC_002947	3666289 =	38 (0.760)					intergenic (+197/‑119)	PP_3229/PP_3230	aliphatic sulfonate‑binding protein/phosphoribosyl transferase domain‑containing protein
*	?	NC_002947	= 3666831	69 (1.310)	4 (0.080)	4/228	NT	5.5%	coding (424/693 nt)	PP_3230	phosphoribosyl transferase domain‑containing protein
	?	NC_002947	= 3666859	73 (1.500)					coding (452/693 nt)	PP_3230	phosphoribosyl transferase domain‑containing protein
*	?	NC_002947	3673224 =	51 (0.970)	4 (0.080)	4/238	NT	7.5%	coding (229/891 nt)	PP_3237	universal stress protein family protein
	?	NC_002947	3673245 =	49 (0.960)					coding (250/891 nt)	PP_3237	universal stress protein family protein
*	?	NC_002947	= 3674020	45 (0.860)	3 (0.060)	3/234	NT	5.8%	intergenic (+134/+6)	PP_3237/PP_3238	universal stress protein family protein/transcriptional regulator PyrR
	?	NC_002947	= 3674044	54 (1.080)					coding (555/573 nt)	PP_3238	transcriptional regulator PyrR
*	?	NC_002947	3688734 =	57 (1.080)	4 (0.080)	4/234	NT	6.8%	coding (808/1107 nt)	PP_3253	carboxylate‑amine ligase
	?	NC_002947	3688800 =	56 (1.120)					coding (874/1107 nt)	PP_3253	carboxylate‑amine ligase
*	?	NC_002947	= 3718247	61 (1.160)	6 (0.120)	6/232	NT	9.3%	coding (389/792 nt)	paaG	2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase
	?	NC_002947	= 3718253	60 (1.210)					coding (383/792 nt)	paaG	2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase
*	?	NC_002947	= 3755057	41 (0.780)	5 (0.100)	4/232	NT	12.4%	coding (455/2202 nt)	PP_3319	GGDEF domain‑containing sensory box protein
	?	NC_002947	= 3755090	32 (0.650)					coding (488/2202 nt)	PP_3319	GGDEF domain‑containing sensory box protein
*	?	NC_002947	3758150 =	79 (1.500)	6 (0.120)	5/230	NT	7.6%	coding (420/1002 nt)	hemBB	porphobilinogen synthase
	?	NC_002947	3758188 =	72 (1.470)					coding (458/1002 nt)	hemBB	porphobilinogen synthase
*	?	NC_002947	= 3760723	38 (0.720)	3 (0.060)	3/232	NT	7.8%	coding (28/2091 nt)	PP_3325	ferric siderophore receptor
	?	NC_002947	= 3760742	35 (0.710)					coding (47/2091 nt)	PP_3325	ferric siderophore receptor
*	?	NC_002947	= 3761742	67 (1.270)	6 (0.120)	7/232	NT	8.4%	coding (1047/2091 nt)	PP_3325	ferric siderophore receptor
	?	NC_002947	= 3761766	68 (1.370)					coding (1071/2091 nt)	PP_3325	ferric siderophore receptor
*	?	NC_002947	3767801 =	49 (0.930)	5 (0.100)	5/238	NT	10.0%	coding (1191/1290 nt)	PP_3329	membrane protein
	?	NC_002947	3767830 =	43 (0.850)					coding (1220/1290 nt)	PP_3329	membrane protein
*	?	NC_002947	3774485 =	48 (0.910)	5 (0.100)	5/232	NT	10.0%	coding (532/603 nt)	PP_3335	hypothetical protein
	?	NC_002947	3774521 =	45 (0.910)					coding (496/603 nt)	PP_3335	hypothetical protein
*	?	NC_002947	3777432 =	47 (0.890)	3 (0.060)	6/234	NT	6.2%	coding (443/2052 nt)	PP_3340	TonB‑dependent receptor
	?	NC_002947	3777447 =	46 (0.920)					coding (458/2052 nt)	PP_3340	TonB‑dependent receptor
*	?	NC_002947	= 3796538	49 (0.930)	6 (0.120)	6/228	NT	11.2%	intergenic (‑42/+50)	fcs/vdh	feruloyl‑CoA‑synthetase/vanillin dehydrogenase
	?	NC_002947	= 3796547	50 (1.030)					intergenic (‑51/+41)	fcs/vdh	feruloyl‑CoA‑synthetase/vanillin dehydrogenase
*	?	NC_002947	3801896 =	63 (1.200)	4 (0.080)	4/230	NT	6.5%	coding (2064/3048 nt)	PP_3361	aminotransferase
	?	NC_002947	3801927 =	56 (1.140)					coding (2033/3048 nt)	PP_3361	aminotransferase
*	?	NC_002947	3807585 =	46 (0.880)	3 (0.060)	3/236	NT	7.3%	coding (2158/2544 nt)	PP_3364	two‑component system response regulator
	?	NC_002947	3807621 =	32 (0.630)					coding (2194/2544 nt)	PP_3364	two‑component system response regulator
*	?	NC_002947	3811617 =	44 (0.840)	4 (0.090)	4/220	NT	9.7%	intergenic (‑165/‑103)	PP_3367/PP_3368	hypothetical protein/MFS transporter
	?	NC_002947	3811664 =	35 (0.750)					intergenic (‑212/‑56)	PP_3367/PP_3368	hypothetical protein/MFS transporter
*	?	NC_002947	= 3813651	62 (1.180)	4 (0.080)	4/230	NT	6.6%	coding (685/852 nt)	PP_3369	LysR family transcriptional regulator
	?	NC_002947	= 3813686	56 (1.140)					coding (720/852 nt)	PP_3369	LysR family transcriptional regulator
*	?	NC_002947	3816445 =	57 (1.080)	5 (0.100)	5/236	NT	8.0%	coding (419/702 nt)	cpxR	two‑component system regulator CpxR
	?	NC_002947	3816480 =	61 (1.210)					coding (384/702 nt)	cpxR	two‑component system regulator CpxR
*	?	NC_002947	= 3823334	52 (0.990)	5 (0.100)	4/228	NT	8.9%	coding (899/951 nt)	kguK	2‑ketogluconokinase
	?	NC_002947	= 3823364	54 (1.110)					coding (869/951 nt)	kguK	2‑ketogluconokinase
*	?	NC_002947	3859023 =	46 (0.880)	5 (0.100)	5/232	NT	9.7%	coding (237/390 nt)	PP_3409	cobalamin biosynthesis protein CobE
	?	NC_002947	3859062 =	50 (1.010)					coding (276/390 nt)	PP_3409	cobalamin biosynthesis protein CobE
*	?	NC_002947	3877527 =	53 (1.010)	3 (0.060)	3/234	NT	5.7%	coding (572/1242 nt)	PP_3425	RND family transporter MFP subunit
	?	NC_002947	3877546 =	48 (0.960)					coding (591/1242 nt)	PP_3425	RND family transporter MFP subunit
*	?	NC_002947	3885033 =	56 (1.070)	4 (0.080)	4/240	NT	6.5%	coding (874/1617 nt)	PP_3429	two component system response regulator/sensor histidine kinase
	?	NC_002947	3885081 =	60 (1.170)					coding (922/1617 nt)	PP_3429	two component system response regulator/sensor histidine kinase
*	?	NC_002947	3920914 =	48 (0.910)	4 (0.080)	4/240	NT	7.4%	coding (896/1689 nt)	acs	acyl‑CoA synthetase
	?	NC_002947	3920968 =	53 (1.030)					coding (842/1689 nt)	acs	acyl‑CoA synthetase
*	?	NC_002947	= 3951141	32 (0.610)	8 (0.200)	8/190	NT	21.7%	intergenic (‑61/+134)	PP_3486/PP_3487	cytochrome c/hypothetical protein
	?	NC_002947	= 3951201	33 (0.810)					intergenic (‑121/+74)	PP_3486/PP_3487	cytochrome c/hypothetical protein
*	?	NC_002947	= 3967920	33 (0.630)	6 (0.120)	6/238	NT	20.4%	coding (4/1179 nt)	PP_3498	transposase
	?	NC_002947	= 3967989	15 (0.300)					coding (73/1179 nt)	PP_3498	transposase
*	?	NC_002947	= 3975717	49 (0.930)	5 (0.100)	5/234	NT	8.9%	coding (104/591 nt)	PP_3505	hypothetical protein
	?	NC_002947	= 3975730	56 (1.120)					coding (91/591 nt)	PP_3505	hypothetical protein
*	?	NC_002947	3989550 =	50 (0.950)	3 (0.060)	3/232	NT	5.7%	coding (2024/2085 nt)	oplA	5‑oxoprolinase A
	?	NC_002947	3989597 =	52 (1.050)					coding (2071/2085 nt)	oplA	5‑oxoprolinase A
*	?	NC_002947	3996848 =	50 (0.950)	5 (0.100)	5/234	NT	9.2%	coding (359/480 nt)	PP_3525	hypothetical protein
	?	NC_002947	3996892 =	51 (1.020)					coding (315/480 nt)	PP_3525	hypothetical protein
*	?	NC_002947	3999816 =	54 (1.030)	3 (0.060)	3/234	NT	5.3%	coding (457/987 nt)	PP_3528	ABC transporter substrate‑binding protein
	?	NC_002947	3999856 =	56 (1.120)					coding (497/987 nt)	PP_3528	ABC transporter substrate‑binding protein
*	?	NC_002947	4014293 =	41 (0.780)	3 (0.060)	3/236	NT	6.7%	intergenic (‑134/‑35)	PP_3541/PP_3542	MgtC family transporter/hypothetical protein
	?	NC_002947	4014323 =	44 (0.870)					intergenic (‑164/‑5)	PP_3541/PP_3542	MgtC family transporter/hypothetical protein
*	?	NC_002947	4034631 =	53 (1.010)	4 (0.080)	4/238	NT	6.9%	coding (117/1320 nt)	PP_3556	membrane protein
	?	NC_002947	4034664 =	57 (1.120)					coding (84/1320 nt)	PP_3556	membrane protein
*	?	NC_002947	4073156 =	45 (0.860)	4 (0.080)	4/234	NT	8.8%	coding (351/1308 nt)	mdtA	multidrug transporter membrane fusion protein
	?	NC_002947	4073176 =	40 (0.800)					coding (331/1308 nt)	mdtA	multidrug transporter membrane fusion protein
*	?	NC_002947	4079458 =	46 (0.880)	4 (0.090)	4/198	NT	10.5%	intergenic (‑218/+166)	sdaC/amaC	serine:H+ symport permease/D‑lysine aminotransferase
	?	NC_002947	4079575 =	31 (0.730)					intergenic (‑335/+49)	sdaC/amaC	serine:H+ symport permease/D‑lysine aminotransferase
*	?	NC_002947	= 4084298	60 (1.140)	5 (0.100)	5/232	NT	8.0%	coding (396/720 nt)	PP_3594	amino acid ABC transporter permease
	?	NC_002947	= 4084322	58 (1.170)					coding (420/720 nt)	PP_3594	amino acid ABC transporter permease
*	?	NC_002947	4093604 =	57 (1.080)	5 (0.100)	4/240	NT	7.9%	coding (557/1581 nt)	PP_3602	2,5‑dioxovalerate dehydrogenase
	?	NC_002947	4093668 =	61 (1.190)					coding (621/1581 nt)	PP_3602	2,5‑dioxovalerate dehydrogenase
*	?	NC_002947	= 4094693	52 (0.990)	4 (0.080)	4/222	NT	7.3%	intergenic (+65/+70)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator
	?	NC_002947	= 4094738	54 (1.140)					intergenic (+110/+25)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator
*	?	NC_002947	4127342 =	54 (1.030)	4 (0.080)	4/230	NT	8.8%	coding (63/1344 nt)	opdT‑II	tyrosine‑specific outer membrane porin D
	?	NC_002947	4127381 =	32 (0.650)					coding (24/1344 nt)	opdT‑II	tyrosine‑specific outer membrane porin D
*	?	NC_002947	= 4131154	61 (1.160)	6 (0.120)	6/226	NT	9.4%	intergenic (+22/+90)	PP_3634/PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
	?	NC_002947	= 4131216	60 (1.240)					intergenic (+84/+28)	PP_3634/PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
*	?	NC_002947	= 4150085	41 (0.780)	6 (0.130)	5/210	NT	12.5%	intergenic (+40/‑357)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
	?	NC_002947	= 4150116	49 (1.090)					intergenic (+71/‑326)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
*	?	NC_002947	4159127 =	93 (1.770)	9 (0.200)	8/214	NT	11.6%	intergenic (+31/‑178)	PP_3661/PP_3662	membrane protein/hypothetical protein
	?	NC_002947	4159187 =	56 (1.230)					intergenic (+91/‑118)	PP_3661/PP_3662	membrane protein/hypothetical protein
*	?	NC_002947	= 4160896	46 (0.880)	10 (0.200)	8/232	NT	19.3%	coding (1205/1302 nt)	PP_3663	GGDEF domain‑containing protein
	?	NC_002947	= 4160919	40 (0.810)					coding (1182/1302 nt)	PP_3663	GGDEF domain‑containing protein
*	?	NC_002947	= 4167412	43 (0.820)	4 (0.080)	4/232	NT	7.7%	coding (108/1212 nt)	creA	creatinase
	?	NC_002947	= 4167439	55 (1.110)					coding (81/1212 nt)	creA	creatinase
*	?	NC_002947	4239756 =	64 (1.220)	4 (0.080)	4/238	NT	5.7%	coding (578/900 nt)	PP_3717	LuxR family transcriptional regulator
	?	NC_002947	4239815 =	70 (1.380)					coding (519/900 nt)	PP_3717	LuxR family transcriptional regulator
*	?	NC_002947	4246911 =	74 (1.410)	4 (0.080)	4/238	NT	5.3%	coding (1050/1608 nt)	aruI	2‑ketoarginine decarboxylase AruI
	?	NC_002947	4246945 =	72 (1.420)					coding (1016/1608 nt)	aruI	2‑ketoarginine decarboxylase AruI
*	?	NC_002947	= 4247709	35 (0.670)	3 (0.060)	3/232	NT	8.6%	coding (252/1608 nt)	aruI	2‑ketoarginine decarboxylase AruI
	?	NC_002947	= 4247747	31 (0.630)					coding (214/1608 nt)	aruI	2‑ketoarginine decarboxylase AruI
*	?	NC_002947	= 4247772	38 (0.720)	4 (0.080)	4/230	NT	10.2%	coding (189/1608 nt)	aruI	2‑ketoarginine decarboxylase AruI
	?	NC_002947	= 4247810	35 (0.710)					coding (151/1608 nt)	aruI	2‑ketoarginine decarboxylase AruI
*	?	NC_002947	= 4261799	67 (1.270)	6 (0.120)	6/230	NT	8.5%	coding (1007/2460 nt)	PP_3734	ABC transporter permease
	?	NC_002947	= 4261808	66 (1.340)					coding (998/2460 nt)	PP_3734	ABC transporter permease
*	?	NC_002947	= 4268676	46 (0.880)	3 (0.060)	3/234	NT	7.1%	coding (669/1341 nt)	PP_3740	MFS transporter
	?	NC_002947	= 4268725	35 (0.700)					coding (620/1341 nt)	PP_3740	MFS transporter
*	?	NC_002947	4276970 =	67 (1.270)	5 (0.100)	5/240	NT	7.9%	coding (322/1236 nt)	glcF	glycolate oxidase iron‑sulfur subunit
	?	NC_002947	4277012 =	52 (1.010)					coding (364/1236 nt)	glcF	glycolate oxidase iron‑sulfur subunit
*	?	NC_002947	= 4278745	39 (0.740)	6 (0.120)	6/232	NT	13.4%	coding (331/339 nt)	PP_3749	hypothetical protein
	?	NC_002947	= 4278751	41 (0.830)					coding (337/339 nt)	PP_3749	hypothetical protein
*	?	NC_002947	= 4285440	67 (1.270)	5 (0.100)	5/238	NT	7.2%	coding (801/849 nt)	hbd	3‑hydroxybutyryl‑CoA dehydrogenase
	?	NC_002947	= 4285467	65 (1.280)					coding (828/849 nt)	hbd	3‑hydroxybutyryl‑CoA dehydrogenase
*	?	NC_002947	= 4294641	31 (0.590)	3 (0.060)	3/238	NT	7.9%	coding (776/1302 nt)	opdN	outer‑membrane porin D
	?	NC_002947	= 4294679	40 (0.790)					coding (738/1302 nt)	opdN	outer‑membrane porin D
*	?	NC_002947	4320675 =	32 (0.610)	4 (0.080)	4/236	NT	12.0%	coding (134/627 nt)	PP_3791	site‑specific recombinase
	?	NC_002947	4320700 =	28 (0.560)					coding (109/627 nt)	PP_3791	site‑specific recombinase
*	?	NC_002947	4335686 =	39 (0.740)	3 (0.060)	3/240	NT	7.7%	coding (127/222 nt)	PP_3808	antibiotic synthesis protein MbtH
	?	NC_002947	4335714 =	34 (0.660)					coding (99/222 nt)	PP_3808	antibiotic synthesis protein MbtH
*	?	NC_002947	4340085 =	35 (0.670)	11 (0.290)	10/178	NT	43.8%	intergenic (+26/‑305)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
	?	NC_002947	4340169 =	3 (0.080)					intergenic (+110/‑221)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
*	?	NC_002947	4349807 =	49 (0.930)	3 (0.060)	3/244	NT	5.8%	coding (186/840 nt)	galU	UTP‑glucose‑1‑phosphate uridylyltransferase
	?	NC_002947	4349830 =	48 (0.920)					coding (163/840 nt)	galU	UTP‑glucose‑1‑phosphate uridylyltransferase
*	?	NC_002947	4353677 =	52 (0.990)	4 (0.080)	3/230	NT	6.9%	coding (759/1086 nt)	yrpB	2‑nitropropane dioxygenase
	?	NC_002947	4353729 =	60 (1.220)					coding (811/1086 nt)	yrpB	2‑nitropropane dioxygenase
*	?	NC_002947	= 4353684	53 (1.010)	3 (0.060)	3/230	NT	5.2%	coding (766/1086 nt)	yrpB	2‑nitropropane dioxygenase
	?	NC_002947	= 4353720	60 (1.220)					coding (802/1086 nt)	yrpB	2‑nitropropane dioxygenase
*	?	NC_002947	4387961 =	55 (1.050)	7 (0.140)	6/240	NT	11.1%	coding (876/1263 nt)	PP_3864	FluMu DNA circulation protein
	?	NC_002947	4388024 =	58 (1.130)					coding (813/1263 nt)	PP_3864	FluMu DNA circulation protein
*	?	NC_002947	= 4419554	44 (0.840)	4 (0.080)	4/236	NT	9.3%	coding (277/552 nt)	PP_3910	hypothetical protein
	?	NC_002947	= 4419573	36 (0.710)					coding (296/552 nt)	PP_3910	hypothetical protein
*	?	NC_002947	= 4438214	59 (1.120)	4 (0.080)	4/234	NT	6.0%	coding (1330/1425 nt)	PP_3932	diguanylate cyclase
	?	NC_002947	= 4438272	69 (1.380)					coding (1388/1425 nt)	PP_3932	diguanylate cyclase
*	?	NC_002947	4442308 =	77 (1.460)	7 (0.140)	6/236	NT	9.0%	coding (267/1293 nt)	nicP‑II	porin‑like protein
	?	NC_002947	4442332 =	67 (1.330)					coding (243/1293 nt)	nicP‑II	porin‑like protein
*	?	NC_002947	= 4492810	36 (0.680)	4 (0.080)	4/230	NT	10.3%	coding (649/783 nt)	PP_3983	hypothetical protein
	?	NC_002947	= 4492819	36 (0.730)					coding (658/783 nt)	PP_3983	hypothetical protein
*	?	NC_002947	= 4504201	59 (1.120)	6 (0.120)	5/242	NT	9.0%	coding (309/393 nt)	tusD	sulfur transfer protein complex subunit TusD
	?	NC_002947	= 4504225	63 (1.220)					coding (333/393 nt)	tusD	sulfur transfer protein complex subunit TusD
*	?	NC_002947	= 4512888	49 (0.930)	3 (0.060)	3/236	NT	5.8%	coding (2148/2505 nt)	ftsK	DNA translocase FtsK
	?	NC_002947	= 4512914	50 (0.990)					coding (2122/2505 nt)	ftsK	DNA translocase FtsK
*	?	NC_002947	= 4516942	57 (1.080)	5 (0.100)	5/236	NT	8.4%	intergenic (+55/‑47)	ate/infA	arginyl‑tRNA‑‑protein transferase/translation initiation factor IF‑1
	?	NC_002947	= 4516956	55 (1.090)					intergenic (+69/‑33)	ate/infA	arginyl‑tRNA‑‑protein transferase/translation initiation factor IF‑1
*	?	NC_002947	4524512 =	73 (1.390)	16 (0.340)	9/218	NT	20.7%	intergenic (+91/‑102)	idh/PP_4013	isocitrate dehydrogenase/MutT/nudix family protein
	?	NC_002947	4524584 =	58 (1.250)					intergenic (+163/‑30)	idh/PP_4013	isocitrate dehydrogenase/MutT/nudix family protein
*	?	NC_002947	= 4530967	67 (1.270)	4 (0.080)	4/238	NT	5.7%	coding (762/1962 nt)	topB	DNA topoisomerase III
	?	NC_002947	= 4530995	67 (1.320)					coding (790/1962 nt)	topB	DNA topoisomerase III
*	?	NC_002947	4537557 =	NA (NA)	10 (0.200)	8/240	NT	91.1%	coding (848/1533 nt)	PP_4025	transposase
	?	NC_002947	4537590 =	1 (0.020)					coding (881/1533 nt)	PP_4025	transposase
*	?	NC_002947	4545340 =	52 (0.990)	4 (0.080)	6/226	NT	8.3%	coding (510/1284 nt)	hyuC	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
	?	NC_002947	4545373 =	41 (0.850)					coding (477/1284 nt)	hyuC	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
*	?	NC_002947	4563594 =	41 (0.780)	3 (0.060)	3/240	NT	7.1%	coding (311/2316 nt)	vgrG‑III	type VI secretion system protein
	?	NC_002947	4563641 =	39 (0.760)					coding (264/2316 nt)	vgrG‑III	type VI secretion system protein
*	?	NC_002947	4577861 =	80 (1.520)	11 (0.220)	6/236	NT	13.4%	intergenic (+26/+83)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
	?	NC_002947	4577913 =	65 (1.290)					intergenic (+78/+31)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
*	?	NC_002947	4586063 =	10 (0.190)	5 (0.140)	5/170	NT	38.6%	intergenic (+102/+115)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	4586167 =	9 (0.250)					intergenic (+206/+11)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 4586100	9 (0.170)	16 (0.440)	11/170	NT	67.8%	intergenic (+139/+78)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	= 4586128	9 (0.250)					intergenic (+167/+50)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 4625552	43 (0.820)	4 (0.080)	3/230	NT	8.2%	intergenic (+4099/+465)	PP_5654/PP_4091	phosphotriesterase/transposase
	?	NC_002947	= 4625580	49 (1.000)					intergenic (+4127/+437)	PP_5654/PP_4091	phosphotriesterase/transposase
*	?	NC_002947	= 4629929	52 (0.990)	3 (0.060)	3/228	NT	5.1%	coding (143/486 nt)	PP_4094	hypothetical protein
	?	NC_002947	= 4629978	63 (1.290)					coding (192/486 nt)	PP_4094	hypothetical protein
*	?	NC_002947	= 4643020	50 (0.950)	9 (0.180)	6/228	NT	16.2%	intergenic (+20/‑160)	PP_4107/PP_4108	LysR family transcriptional regulator/4‑aminobutyrate aminotransferase
	?	NC_002947	= 4643043	47 (0.970)					intergenic (+43/‑137)	PP_4107/PP_4108	LysR family transcriptional regulator/4‑aminobutyrate aminotransferase
*	?	NC_002947	4668856 =	53 (1.010)	5 (0.100)	5/240	NT	9.2%	coding (682/1533 nt)	nuoM	NADH‑quinone oxidoreductase subunit M
	?	NC_002947	4668888 =	47 (0.920)					coding (714/1533 nt)	nuoM	NADH‑quinone oxidoreductase subunit M
*	?	NC_002947	4675357 =	36 (0.680)	8 (0.190)	7/200	NT	24.2%	intergenic (+10/+94)	PP_4137/chrR	outer membrane siderophore receptor/chromate reductase
	?	NC_002947	4675415 =	21 (0.490)					intergenic (+68/+36)	PP_4137/chrR	outer membrane siderophore receptor/chromate reductase
*	?	NC_002947	4715162 =	41 (0.780)	3 (0.060)	3/230	NT	7.1%	coding (347/1932 nt)	PP_4173	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4715199 =	40 (0.810)					coding (384/1932 nt)	PP_4173	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	4726137 =	44 (0.840)	3 (0.060)	3/236	NT	7.3%	coding (1291/1314 nt)	brnQ	branched‑chain amino acid transporter
	?	NC_002947	4726166 =	34 (0.670)					coding (1262/1314 nt)	brnQ	branched‑chain amino acid transporter
*	?	NC_002947	4755172 =	60 (1.140)	8 (0.160)	7/228	NT	14.3%	coding (368/1965 nt)	pvdT	pyoverdine ABC transporter ATP‑binding protein/permease
	?	NC_002947	4755215 =	40 (0.820)					coding (411/1965 nt)	pvdT	pyoverdine ABC transporter ATP‑binding protein/permease
*	?	NC_002947	4773349 =	49 (0.930)	10 (0.200)	9/236	NT	18.0%	coding (5963/10413 nt)	pvdD	non‑ribosomal peptide synthetase
	?	NC_002947	4773394 =	44 (0.870)					coding (5918/10413 nt)	pvdD	non‑ribosomal peptide synthetase
*	?	NC_002947	4808219 =	0 (0.000)	25 (0.670)	18/176	NT	63.3%	intergenic (‑283/‑272)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 5988991	29 (0.770)					intergenic (+229/‑317)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	4826312 =	44 (0.840)	6 (0.120)	6/236	NT	13.2%	coding (4923/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	4826345 =	37 (0.730)					coding (4890/12954 nt)	pvdL	non‑ribosomal peptide synthetase
*	?	NC_002947	= 4837267	51 (0.970)	4 (0.080)	4/240	NT	7.2%	coding (1229/1425 nt)	ccoN‑I	cbb3‑type cytochrome c oxidase subunit 1
	?	NC_002947	= 4837288	54 (1.050)					coding (1250/1425 nt)	ccoN‑I	cbb3‑type cytochrome c oxidase subunit 1
*	?	NC_002947	= 4847336	56 (1.070)	6 (0.120)	4/238	NT	9.7%	coding (2041/2475 nt)	PP_4261	cation‑transporting P‑type ATPase
	?	NC_002947	= 4847357	57 (1.120)					coding (2062/2475 nt)	PP_4261	cation‑transporting P‑type ATPase
*	?	NC_002947	4853195 =	71 (1.350)	5 (0.100)	5/238	NT	6.1%	coding (1951/2076 nt)	dnaX	DNA polymerase III subunit gamma
	?	NC_002947	4853224 =	84 (1.650)					coding (1922/2076 nt)	dnaX	DNA polymerase III subunit gamma
*	?	NC_002947	4861173 =	45 (0.860)	13 (0.310)	10/196	NT	25.1%	intergenic (‑79/+158)	ligA/PP_4275	DNA ligase/cell division protein ZipA
	?	NC_002947	4861264 =	42 (1.010)					intergenic (‑170/+67)	ligA/PP_4275	DNA ligase/cell division protein ZipA
*	?	NC_002947	= 4861197	51 (0.970)	15 (0.360)	9/196	NT	26.7%	intergenic (‑103/+134)	ligA/PP_4275	DNA ligase/cell division protein ZipA
	?	NC_002947	= 4861238	42 (1.010)					intergenic (‑144/+93)	ligA/PP_4275	DNA ligase/cell division protein ZipA
*	?	NC_002947	= 4870735	65 (1.240)	6 (0.140)	6/196	NT	9.4%	intergenic (+40/‑80)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
	?	NC_002947	= 4870755	64 (1.530)					intergenic (+60/‑60)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
*	?	NC_002947	= 4876479	110 (2.090)	12 (0.250)	10/228	NT	11.1%	intergenic (+272/+165)	PP_4284/pucM	transporter/5‑hydroxyisourate hydrolase
	?	NC_002947	= 4876537	90 (1.850)					intergenic (+330/+107)	PP_4284/pucM	transporter/5‑hydroxyisourate hydrolase
*	?	NC_002947	4886181 =	19 (0.360)	6 (0.150)	6/188	NT	22.9%	intergenic (+15/+108)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
	?	NC_002947	4886268 =	26 (0.650)					intergenic (+102/+21)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 4886209	23 (0.440)	7 (0.170)	6/188	NT	24.3%	intergenic (+43/+80)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
	?	NC_002947	= 4886238	26 (0.650)					intergenic (+72/+51)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 4889640	52 (0.990)	7 (0.170)	7/192	NT	12.3%	intergenic (+41/‑112)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
	?	NC_002947	= 4889677	59 (1.440)					intergenic (+78/‑75)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
*	?	NC_002947	= 4893624	62 (1.180)	8 (0.200)	7/192	NT	12.9%	intergenic (+54/‑154)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	= 4893649	60 (1.470)					intergenic (+79/‑129)	pyk/PP_4302	pyruvate kinase/urea transporter
*	?	NC_002947	4896423 =	40 (0.760)	10 (0.230)	9/204	NT	23.8%	intergenic (+11/‑197)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	4896512 =	31 (0.710)					intergenic (+100/‑108)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	= 4896443	38 (0.720)	21 (0.480)	11/204	NT	40.2%	intergenic (+31/‑177)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	= 4896490	31 (0.710)					intergenic (+78/‑130)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	4902896 =	77 (1.460)	6 (0.130)	6/224	NT	9.2%	intergenic (+37/+82)	PP_4310/PP_4311	hydantoin racemase/D‑amino acid dehydrogenase small subunit
	?	NC_002947	4902953 =	49 (1.020)					intergenic (+94/+25)	PP_4310/PP_4311	hydantoin racemase/D‑amino acid dehydrogenase small subunit
*	?	NC_002947	= 4908348	8 (0.150)	12 (0.230)	7/240	NT	60.6%	intergenic (‑279/‑3)	PP_4317/PP_4318	hypothetical protein/transposase
	?	NC_002947	= 4908381	NA (NA)					coding (31/1302 nt)	PP_4318	transposase
*	?	NC_002947	4953266 =	56 (1.070)	4 (0.080)	4/234	NT	7.2%	coding (1211/1692 nt)	PP_4363	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4953318 =	50 (1.000)					coding (1159/1692 nt)	PP_4363	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	4962074 =	64 (1.220)	5 (0.100)	5/238	NT	7.1%	coding (409/1356 nt)	atoC	two‑component system DNA‑binding transcriptional activator AtoC
	?	NC_002947	4962125 =	69 (1.360)					coding (358/1356 nt)	atoC	two‑component system DNA‑binding transcriptional activator AtoC
*	?	NC_002947	4974042 =	72 (1.370)	5 (0.100)	4/234	NT	7.1%	coding (1607/2043 nt)	flgK	flagellar hook‑associated protein FlgK
	?	NC_002947	4974073 =	63 (1.260)					coding (1576/2043 nt)	flgK	flagellar hook‑associated protein FlgK
*	?	NC_002947	= 5035285	0 (0.000)	8 (0.150)	6/246	NT	100%	coding (1277/1536 nt)	PP_4439	transposase
	?	NC_002947	= 5038211	NA (NA)					coding (1255/1536 nt)	PP_4443	transposase
*	?	NC_002947	5053118 =	47 (0.890)	6 (0.120)	5/226	NT	11.5%	coding (1381/1833 nt)	gsiA	glutathione ABC transporter ATP‑binding protein
	?	NC_002947	5053171 =	49 (1.020)					coding (1328/1833 nt)	gsiA	glutathione ABC transporter ATP‑binding protein
*	?	NC_002947	= 5080875	40 (0.760)	4 (0.080)	4/234	NT	9.4%	coding (712/1236 nt)	lysC	aspartokinase
	?	NC_002947	= 5080881	39 (0.780)					coding (706/1236 nt)	lysC	aspartokinase
*	?	NC_002947	= 5081636	63 (1.200)	5 (0.100)	5/238	NT	8.0%	intergenic (‑50/+53)	lysC/alaS	aspartokinase/alanine‑‑tRNA ligase
	?	NC_002947	= 5081683	54 (1.060)					intergenic (‑97/+6)	lysC/alaS	aspartokinase/alanine‑‑tRNA ligase
*	?	NC_002947	5091068 =	54 (1.030)	4 (0.080)	4/234	NT	7.6%	intergenic (‑84/+64)	astA‑II/astC	arginine N‑succinyltransferase subunit alpha/acetylornithine aminotransferase
	?	NC_002947	5091116 =	46 (0.920)					intergenic (‑132/+16)	astA‑II/astC	arginine N‑succinyltransferase subunit alpha/acetylornithine aminotransferase
*	?	NC_002947	5091474 =	54 (1.030)	4 (0.080)	4/238	NT	7.2%	coding (879/1221 nt)	astC	acetylornithine aminotransferase
	?	NC_002947	5091498 =	51 (1.000)					coding (855/1221 nt)	astC	acetylornithine aminotransferase
*	?	NC_002947	= 5114683	73 (1.390)	4 (0.080)	4/232	NT	5.7%	coding (313/666 nt)	yciO	maturation protein
	?	NC_002947	= 5114705	63 (1.270)					coding (291/666 nt)	yciO	maturation protein
*	?	NC_002947	= 5130870	48 (0.910)	3 (0.060)	3/236	NT	5.7%	coding (582/2148 nt)	recQ	ATP‑dependent DNA 3'‑5' helicase
	?	NC_002947	= 5130890	53 (1.050)					coding (562/2148 nt)	recQ	ATP‑dependent DNA 3'‑5' helicase
*	?	NC_002947	= 5159824	49 (0.930)	12 (0.310)	10/184	NT	21.9%	intergenic (+39/+67)	PP_4542/PP_4543	ABC transporter ATP‑binding protein/permease/hypothetical protein
	?	NC_002947	= 5159839	49 (1.250)					intergenic (+54/+52)	PP_4542/PP_4543	ABC transporter ATP‑binding protein/permease/hypothetical protein
*	?	NC_002947	5172401 =	55 (1.050)	4 (0.080)	4/238	NT	6.6%	coding (607/1698 nt)	fadD‑I	long‑chain‑fatty acid‑‑CoA ligase
	?	NC_002947	5172437 =	60 (1.180)					coding (571/1698 nt)	fadD‑I	long‑chain‑fatty acid‑‑CoA ligase
*	?	NC_002947	5189284 =	44 (0.840)	4 (0.080)	4/234	NT	8.6%	coding (70/294 nt)	PP_4569	hypothetical protein
	?	NC_002947	5189342 =	43 (0.860)					coding (12/294 nt)	PP_4569	hypothetical protein
*	?	NC_002947	5190385 =	43 (0.820)	3 (0.060)	3/226	NT	7.5%	intergenic (‑72/+102)	PP_4570/cysK	hypothetical protein/cysteine synthase A
	?	NC_002947	5190422 =	35 (0.730)					intergenic (‑109/+65)	PP_4570/cysK	hypothetical protein/cysteine synthase A
*	?	NC_002947	= 5199072	37 (0.700)	5 (0.100)	5/234	NT	11.0%	coding (311/912 nt)	PP_4579	LysR family transcriptional regulator
	?	NC_002947	= 5199112	46 (0.920)					coding (351/912 nt)	PP_4579	LysR family transcriptional regulator
*	?	NC_002947	5201627 =	12 (0.230)	9 (0.250)	7/172	NT	52.4%	intergenic (‑65/‑115)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	5201722 =	8 (0.220)					intergenic (‑160/‑20)	PP_4582/PP_4583	membrane protein/putative Peptidase
*	?	NC_002947	= 5201663	13 (0.250)	13 (0.350)	8/172	NT	60.4%	intergenic (‑101/‑79)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	= 5201684	8 (0.220)					intergenic (‑122/‑58)	PP_4582/PP_4583	membrane protein/putative Peptidase
*	?	NC_002947	5222954 =	NA (NA)	22 (0.440) +GGTGAT	13/234	NT	26.6%	intergenic (‑317/+62)	PP_4602/PP_4603	AraC family transcriptional regulator/transposase
	?	NC_002947	= 5454758	64 (1.220)					intergenic (+40/+121)	PP_4791/PP_4792	transposase/hypothetical protein
*	?	NC_002947	= 5225869	48 (0.910)	4 (0.080)	4/236	NT	7.3%	coding (59/876 nt)	PP_4605	AraC family transcriptional regulator
	?	NC_002947	= 5225900	55 (1.090)					coding (90/876 nt)	PP_4605	AraC family transcriptional regulator
*	?	NC_002947	= 5255633	47 (0.890)	4 (0.080)	4/232	NT	8.2%	coding (115/738 nt)	folM	bifunctional dihydrofolate reductase/dihydromonapterin reductase
	?	NC_002947	= 5255654	45 (0.910)					coding (136/738 nt)	folM	bifunctional dihydrofolate reductase/dihydromonapterin reductase
*	?	NC_002947	= 5284055	63 (1.200)	5 (0.100)	5/232	NT	7.9%	coding (412/1920 nt)	PP_4658	methyl‑accepting chemotaxis protein
	?	NC_002947	= 5284082	58 (1.170)					coding (439/1920 nt)	PP_4658	methyl‑accepting chemotaxis protein
*	?	NC_002947	= 5288471	27 (0.510)	6 (0.150)	5/186	NT	18.1%	intergenic (‑104/+80)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
	?	NC_002947	= 5288505	34 (0.860)					intergenic (‑138/+46)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
*	?	NC_002947	5290029 =	49 (0.930)	4 (0.080)	4/236	NT	7.5%	coding (345/765 nt)	PP_4663	transmembrane protein
	?	NC_002947	5290058 =	52 (1.030)					coding (316/765 nt)	PP_4663	transmembrane protein
*	?	NC_002947	5295536 =	67 (1.270)	5 (0.100)	5/232	NT	8.4%	intergenic (+19/+107)	PP_4668/PP_4669	LysR family transcriptional regulator/OmpA family protein
	?	NC_002947	5295619 =	46 (0.930)					intergenic (+102/+24)	PP_4668/PP_4669	LysR family transcriptional regulator/OmpA family protein
*	?	NC_002947	5317948 =	60 (1.140)	3 (0.060)	3/240	NT	5.2%	coding (1474/1725 nt)	ilvI	acetohydroxybutanoate synthase/acetolactate synthase
	?	NC_002947	5317987 =	50 (0.980)					coding (1435/1725 nt)	ilvI	acetohydroxybutanoate synthase/acetolactate synthase
*	?	NC_002947	5318455 =	52 (0.990)	7 (0.140)	6/230	NT	13.6%	coding (967/1725 nt)	ilvI	acetohydroxybutanoate synthase/acetolactate synthase
	?	NC_002947	5318478 =	40 (0.810)					coding (944/1725 nt)	ilvI	acetohydroxybutanoate synthase/acetolactate synthase
*	?	NC_002947	5328155 =	49 (0.930)	6 (0.120)	6/238	NT	11.8%	coding (232/1038 nt)	PP_4688	heme/hemin ABC transporter permease
	?	NC_002947	5328192 =	42 (0.830)					coding (195/1038 nt)	PP_4688	heme/hemin ABC transporter permease
*	?	NC_002947	5345732 =	67 (1.270)	8 (0.160)	8/228	NT	12.2%	coding (1082/1935 nt)	acsA‑II	acetyl‑CoA synthetase
	?	NC_002947	5345771 =	53 (1.090)					coding (1121/1935 nt)	acsA‑II	acetyl‑CoA synthetase
*	?	NC_002947	5350525 =	38 (0.720)	12 (0.240)	12/234	NT	22.4%	intergenic (+14/+68)	PP_4704/PP_4705	hypothetical protein/glyoxalase
	?	NC_002947	5350566 =	47 (0.940)					intergenic (+55/+27)	PP_4704/PP_4705	hypothetical protein/glyoxalase
*	?	NC_002947	5356179 =	44 (0.840)	5 (0.100)	4/244	NT	10.2%	intergenic (‑28/+89)	rbfA/infB	ribosome‑binding factor A/translation initiation factor IF‑2
	?	NC_002947	5356213 =	44 (0.840)					intergenic (‑62/+55)	rbfA/infB	ribosome‑binding factor A/translation initiation factor IF‑2
*	?	NC_002947	5359413 =	48 (0.910)	4 (0.080)	4/228	NT	9.6%	coding (905/1482 nt)	nusA	transcription termination/antitermination factor L
	?	NC_002947	5359462 =	31 (0.640)					coding (856/1482 nt)	nusA	transcription termination/antitermination factor L
*	?	NC_002947	5382446 =	41 (0.780)	3 (0.080)	3/176	NT	12.4%	intergenic (+18/+115)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
	?	NC_002947	5382544 =	13 (0.350)					intergenic (+116/+17)	smpB/pdhR	SsrA‑binding protein/DNA‑binding transcriptional regulator LldR
*	?	NC_002947	5405650 =	48 (0.910)	4 (0.080)	4/238	NT	8.3%	coding (368/660 nt)	PP_4749	amino acid ABC transporter permease
	?	NC_002947	5405682 =	42 (0.830)					coding (336/660 nt)	PP_4749	amino acid ABC transporter permease
*	?	NC_002947	= 5413420	61 (1.160)	4 (0.080)	4/234	NT	6.2%	coding (798/2394 nt)	PP_4755	ferrichrome‑iron receptor
	?	NC_002947	= 5413439	64 (1.280)					coding (779/2394 nt)	PP_4755	ferrichrome‑iron receptor
*	?	NC_002947	5414380 =	37 (0.700)	11 (0.210)	9/246	NT	26.2%	intergenic (‑163/+53)	PP_4755/gabP‑V	ferrichrome‑iron receptor/gamma‑aminobutyrate permease
	?	NC_002947	5414412 =	25 (0.480)					intergenic (‑195/+21)	PP_4755/gabP‑V	ferrichrome‑iron receptor/gamma‑aminobutyrate permease
*	?	NC_002947	5430425 =	87 (1.660)	11 (0.240)	10/216	NT	13.7%	intergenic (‑59/+102)	PP_4769/PP_4770	hypothetical protein/hypothetical protein
	?	NC_002947	5430474 =	62 (1.340)					intergenic (‑108/+53)	PP_4769/PP_4770	hypothetical protein/hypothetical protein
*	?	NC_002947	5485172 =	66 (1.260)	6 (0.150)	6/194	NT	11.8%	intergenic (+30/‑117)	purH/purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
	?	NC_002947	5485246 =	38 (0.920)					intergenic (+104/‑43)	purH/purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
*	?	NC_002947	5501464 =	70 (1.330)	6 (0.130)	6/214	NT	11.1%	intergenic (+27/‑192)	PP_4834/PP_4835	SPFH domain‑containing protein/hypothetical protein
	?	NC_002947	5501542 =	35 (0.770)					intergenic (+105/‑114)	PP_4834/PP_4835	SPFH domain‑containing protein/hypothetical protein
*	?	NC_002947	= 5506637	36 (0.680)	13 (0.320)	11/188	NT	29.7%	intergenic (+48/‑151)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
	?	NC_002947	= 5506650	34 (0.850)					intergenic (+61/‑138)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
*	?	NC_002947	= 5507448	61 (1.160)	3 (0.060)	3/236	NT	5.1%	coding (661/1407 nt)	cycA	D‑alanine/beta‑alanine/D‑serine/glycine permease
	?	NC_002947	= 5507479	54 (1.070)					coding (692/1407 nt)	cycA	D‑alanine/beta‑alanine/D‑serine/glycine permease
*	?	NC_002947	5509196 =	45 (0.860)	3 (0.060)	3/226	NT	7.9%	coding (753/1266 nt)	urtA	urea ABC transporter substrate‑binding protein
	?	NC_002947	5509227 =	29 (0.600)					coding (784/1266 nt)	urtA	urea ABC transporter substrate‑binding protein
*	?	NC_002947	= 5510261	46 (0.880)	5 (0.100)	5/238	NT	10.6%	coding (412/1488 nt)	urtB	urea ABC transporter permease
	?	NC_002947	= 5510304	40 (0.790)					coding (455/1488 nt)	urtB	urea ABC transporter permease
*	?	NC_002947	5510502 =	49 (0.930)	5 (0.100)	5/234	NT	11.2%	coding (653/1488 nt)	urtB	urea ABC transporter permease
	?	NC_002947	5510551 =	33 (0.660)					coding (702/1488 nt)	urtB	urea ABC transporter permease
*	?	NC_002947	5513290 =	45 (0.860)	10 (0.240)	10/194	NT	23.1%	intergenic (+20/‑134)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
	?	NC_002947	5513398 =	31 (0.750)					intergenic (+128/‑26)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
*	?	NC_002947	= 5513315	40 (0.760)	6 (0.150)	5/194	NT	16.1%	intergenic (+45/‑109)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
	?	NC_002947	= 5513371	31 (0.750)					intergenic (+101/‑53)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
*	?	NC_002947	5537079 =	28 (0.530)	10 (0.240)	8/192	NT	26.7%	intergenic (+8/+95)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
	?	NC_002947	5537155 =	33 (0.810)					intergenic (+84/+19)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
*	?	NC_002947	= 5537105	31 (0.590)	17 (0.420)	12/192	NT	37.3%	intergenic (+34/+69)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
	?	NC_002947	= 5537127	33 (0.810)					intergenic (+56/+47)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
*	?	NC_002947	5546370 =	57 (1.080)	4 (0.080)	4/236	NT	6.1%	coding (162/747 nt)	rlmB	23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
	?	NC_002947	5546409 =	68 (1.350)					coding (123/747 nt)	rlmB	23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
*	?	NC_002947	= 5552384	31 (0.590)	3 (0.060)	3/232	NT	9.1%	coding (1565/1566 nt)	PP_4882	iron ABC transporter permease
	?	NC_002947	= 5552417	31 (0.630)					intergenic (+32/+629)	PP_4882/PP_5717	iron ABC transporter permease/hypothetical protein
*	?	NC_002947	= 5555427	49 (0.930)	3 (0.060)	3/238	NT	6.1%	coding (146/459 nt)	PP_4887	hypothetical protein
	?	NC_002947	= 5555453	45 (0.890)					coding (120/459 nt)	PP_4887	hypothetical protein
*	?	NC_002947	5577513 =	52 (0.990)	3 (0.060)	3/238	NT	5.4%	coding (1184/1536 nt)	PP_4906	hypothetical protein
	?	NC_002947	5577585 =	54 (1.060)					coding (1256/1536 nt)	PP_4906	hypothetical protein
*	?	NC_002947	= 5581781	46 (0.880)	4 (0.080)	4/238	NT	8.2%	coding (765/1458 nt)	PP_4910	hypothetical protein
	?	NC_002947	= 5581807	45 (0.890)					coding (791/1458 nt)	PP_4910	hypothetical protein
*	?	NC_002947	5583099 =	47 (0.890)	6 (0.120)	6/240	NT	12.4%	coding (298/756 nt)	PP_4911	hypothetical protein
	?	NC_002947	5583142 =	39 (0.760)					coding (255/756 nt)	PP_4911	hypothetical protein
*	?	NC_002947	= 5585725	59 (1.120)	3 (0.060)	3/240	NT	5.1%	coding (58/2259 nt)	parC	DNA topoisomerase IV subunit A
	?	NC_002947	= 5585764	55 (1.070)					coding (19/2259 nt)	parC	DNA topoisomerase IV subunit A
*	?	NC_002947	5585727 =	61 (1.160)	5 (0.100)	5/234	NT	8.2%	coding (56/2259 nt)	parC	DNA topoisomerase IV subunit A
	?	NC_002947	5585764 =	54 (1.080)					coding (19/2259 nt)	parC	DNA topoisomerase IV subunit A
*	?	NC_002947	5594143 =	22 (0.420)	5 (0.120)	5/190	NT	18.5%	intergenic (‑39/+106)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	5594236 =	27 (0.670)					intergenic (‑132/+13)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	= 5594170	20 (0.380)	8 (0.200)	7/190	NT	27.4%	intergenic (‑66/+79)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	= 5594207	27 (0.670)					intergenic (‑103/+42)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	= 5611532	72 (1.370)	8 (0.160)	7/240	NT	10.3%	coding (475/1176 nt)	PP_4931	hypothetical protein
	?	NC_002947	= 5611554	69 (1.350)					coding (497/1176 nt)	PP_4931	hypothetical protein
*	?	NC_002947	= 5621093	47 (0.890)	5 (0.100)	4/238	NT	10.4%	coding (222/774 nt)	PP_4939	hypothetical protein
	?	NC_002947	= 5621110	41 (0.810)					coding (205/774 nt)	PP_4939	hypothetical protein
*	?	NC_002947	= 5647443	53 (1.010)	5 (0.100)	4/228	NT	7.6%	coding (196/738 nt)	PP_4955	hypothetical protein
	?	NC_002947	= 5647478	72 (1.480)					coding (161/738 nt)	PP_4955	hypothetical protein
*	?	NC_002947	= 5655636	59 (1.120)	4 (0.080)	4/234	NT	7.4%	intergenic (‑40/+112)	epd/tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
	?	NC_002947	= 5655732	44 (0.880)					intergenic (‑136/+16)	epd/tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
*	?	NC_002947	= 5680661	69 (1.310)	5 (0.100)	4/234	NT	6.8%	coding (665/720 nt)	rsmE	16S rRNA (uracil(1498)‑N(3))‑methyltransferase
	?	NC_002947	= 5680683	72 (1.440)					coding (687/720 nt)	rsmE	16S rRNA (uracil(1498)‑N(3))‑methyltransferase
*	?	NC_002947	5692116 =	64 (1.220)	4 (0.080)	4/236	NT	6.4%	coding (435/906 nt)	PP_4994	hypothetical protein
	?	NC_002947	5692140 =	55 (1.090)					coding (459/906 nt)	PP_4994	hypothetical protein
*	?	NC_002947	5698783 =	51 (0.970)	8 (0.180)	6/212	NT	13.7%	intergenic (+17/‑150)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
	?	NC_002947	5698866 =	57 (1.260)					intergenic (+100/‑67)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
*	?	NC_002947	5729998 =	57 (1.080)	4 (0.080)	4/232	NT	7.2%	coding (536/1083 nt)	pip	proline iminopeptidase
	?	NC_002947	5730032 =	50 (1.010)					coding (502/1083 nt)	pip	proline iminopeptidase
*	?	NC_002947	5743375 =	66 (1.260)	11 (0.210)	9/242	NT	15.3%	intergenic (‑152/+95)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	5743463 =	57 (1.100)					intergenic (‑240/+7)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
*	?	NC_002947	= 5746768	49 (0.930)	4 (0.080)	4/234	NT	8.0%	coding (1262/1422 nt)	PP_5043	PhoPQ‑activated pathogenicity‑like protein
	?	NC_002947	= 5746784	45 (0.900)					coding (1246/1422 nt)	PP_5043	PhoPQ‑activated pathogenicity‑like protein
*	?	NC_002947	= 5755142	62 (1.180)	5 (0.100)	5/236	NT	7.7%	coding (200/1437 nt)	glnG	two‑component system DNA‑binding response regulator GlnL/GlnG
	?	NC_002947	= 5755156	60 (1.190)					coding (214/1437 nt)	glnG	two‑component system DNA‑binding response regulator GlnL/GlnG
*	?	NC_002947	5756724 =	68 (1.290)	4 (0.090)	4/220	NT	6.4%	intergenic (+345/‑343)	glnG/PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase
	?	NC_002947	5756778 =	57 (1.210)					intergenic (+399/‑289)	glnG/PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase
*	?	NC_002947	5759460 =	52 (0.990)	12 (0.310)	8/182	NT	30.6%	intergenic (+13/+143)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
	?	NC_002947	5759552 =	16 (0.410)					intergenic (+105/+51)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
*	?	NC_002947	= 5760421	45 (0.860)	3 (0.060)	3/234	NT	7.0%	coding (377/414 nt)	PP_5055	Sulfurtransferase
	?	NC_002947	= 5760453	37 (0.740)					coding (345/414 nt)	PP_5055	Sulfurtransferase
*	?	NC_002947	= 5764475	42 (0.800)	6 (0.120)	4/232	NT	14.0%	coding (400/1317 nt)	ctpA	carboxy‑terminal‑processing protease
	?	NC_002947	= 5764490	34 (0.690)					coding (415/1317 nt)	ctpA	carboxy‑terminal‑processing protease
*	?	NC_002947	= 5765441	77 (1.460)	9 (0.180)	9/232	NT	11.5%	coding (41/768 nt)	PP_5059	hypothetical protein
	?	NC_002947	= 5765457	66 (1.330)					coding (57/768 nt)	PP_5059	hypothetical protein
*	?	NC_002947	5775531 =	49 (0.930)	4 (0.080)	4/236	NT	8.2%	coding (1342/1473 nt)	betB	NAD‑dependent betaine aldehyde dehydrogenase
	?	NC_002947	5775547 =	42 (0.830)					coding (1358/1473 nt)	betB	NAD‑dependent betaine aldehyde dehydrogenase
*	?	NC_002947	= 5784952	53 (1.010)	6 (0.120)	6/228	NT	11.0%	intergenic (+62/‑101)	kefA/PP_5068	intermediate mechanosensitive channel protein/hypothetical protein
	?	NC_002947	= 5784997	48 (0.990)					intergenic (+107/‑56)	kefA/PP_5068	intermediate mechanosensitive channel protein/hypothetical protein
*	?	NC_002947	= 5786551	57 (1.080)	6 (0.140)	4/198	NT	10.7%	intergenic (+38/‑93)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	= 5786588	54 (1.280)					intergenic (+75/‑56)	PP_5068/trxC	hypothetical protein/thioredoxin
*	?	NC_002947	5798299 =	40 (0.760)	6 (0.120)	6/232	NT	14.3%	intergenic (‑344/+30)	gltB/PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
	?	NC_002947	5798321 =	34 (0.690)					intergenic (‑366/+8)	gltB/PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
*	?	NC_002947	5815196 =	65 (1.240)	4 (0.080)	4/234	NT	5.4%	coding (323/699 nt)	PP_5090	cell division protein
	?	NC_002947	5815228 =	77 (1.540)					coding (355/699 nt)	PP_5090	cell division protein
*	?	NC_002947	5816894 =	42 (0.800)	11 (0.220)	9/236	NT	21.7%	intergenic (+24/+105)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	5816989 =	39 (0.770)					intergenic (+119/+10)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
*	?	NC_002947	= 5835796	74 (1.410)	6 (0.120)	5/236	NT	8.3%	coding (528/603 nt)	PP_5114	adenine methyltransferase
	?	NC_002947	= 5835814	62 (1.230)					coding (546/603 nt)	PP_5114	adenine methyltransferase
*	?	NC_002947	= 5873948	49 (0.930)	10 (0.200)	8/240	NT	17.4%	coding (597/657 nt)	PP_5147	haloacid dehalogenase‑like family hydrolase
	?	NC_002947	= 5873965	47 (0.920)					coding (614/657 nt)	PP_5147	haloacid dehalogenase‑like family hydrolase
*	?	NC_002947	= 5874614	58 (1.100)	6 (0.130)	5/224	NT	8.1%	intergenic (‑50/+98)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
	?	NC_002947	= 5874674	83 (1.740)					intergenic (‑110/+38)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
*	?	NC_002947	= 5903842	44 (0.840)	3 (0.070)	3/214	NT	6.6%	intergenic (+42/+65)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	= 5903870	47 (1.030)					intergenic (+70/+37)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	5914213 =	45 (0.860)	4 (0.100)	4/190	NT	12.8%	intergenic (+49/+104)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	5914309 =	20 (0.490)					intergenic (+145/+8)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5929320	72 (1.370)	8 (0.150)	7/242	NT	10.9%	coding (1124/1224 nt)	visC	ubiquinone biosynthesis oxidoreductase
	?	NC_002947	= 5929341	60 (1.160)					coding (1103/1224 nt)	visC	ubiquinone biosynthesis oxidoreductase
*	?	NC_002947	5929577 =	57 (1.080)	3 (0.060)	3/234	NT	5.1%	coding (867/1224 nt)	visC	ubiquinone biosynthesis oxidoreductase
	?	NC_002947	5929646 =	57 (1.140)					coding (798/1224 nt)	visC	ubiquinone biosynthesis oxidoreductase
*	?	NC_002947	5943657 =	70 (1.330)	4 (0.090)	3/202	NT	6.7%	intergenic (+9/+76)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
	?	NC_002947	5943722 =	54 (1.250)					intergenic (+74/+11)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
*	?	NC_002947	5947161 =	50 (0.950)	14 (0.290)	13/226	NT	22.4%	intergenic (‑97/+109)	ubiD/rho	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho
	?	NC_002947	5947230 =	51 (1.060)					intergenic (‑166/+40)	ubiD/rho	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho
*	?	NC_002947	5955866 =	44 (0.840)	6 (0.120)	6/228	NT	14.2%	intergenic (+36/+168)	elbB/PP_5221	putative hydrolase/hypothetical protein
	?	NC_002947	5955911 =	32 (0.660)					intergenic (+81/+123)	elbB/PP_5221	putative hydrolase/hypothetical protein
*	?	NC_002947	= 5965051	80 (1.520)	6 (0.120)	6/236	NT	6.7%	coding (189/696 nt)	had	(S)‑2‑haloacid dehalogenase
	?	NC_002947	= 5965075	90 (1.790)					coding (213/696 nt)	had	(S)‑2‑haloacid dehalogenase
*	?	NC_002947	5981456 =	47 (0.890)	13 (0.270)	12/222	NT	22.2%	coding (2045/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
	?	NC_002947	5981491 =	49 (1.030)					coding (2080/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
*	?	NC_002947	= 5999355	49 (0.930)	4 (0.080)	4/230	NT	7.2%	intergenic (‑154/‑167)	ycaC‑IV/PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
	?	NC_002947	= 5999440	58 (1.180)					intergenic (‑239/‑82)	ycaC‑IV/PP_5256	putative hydrolase/cyclic nucleotide‑binding protein
*	?	NC_002947	= 6000988	52 (0.990)	4 (0.100)	3/186	NT	9.5%	intergenic (+39/+70)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
	?	NC_002947	= 6001022	37 (0.930)					intergenic (+73/+36)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
*	?	NC_002947	6004640 =	53 (1.010)	5 (0.100)	5/234	NT	9.8%	coding (513/891 nt)	PP_5259	LysR family transcriptional regulator
	?	NC_002947	6004666 =	42 (0.840)					coding (539/891 nt)	PP_5259	LysR family transcriptional regulator
*	?	NC_002947	6013865 =	46 (0.880)	13 (0.320)	12/192	NT	28.6%	intergenic (+14/+96)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
	?	NC_002947	6013947 =	29 (0.710)					intergenic (+96/+14)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
*	?	NC_002947	= 6027969	40 (0.760)	10 (0.230)	8/204	NT	21.3%	intergenic (‑57/+54)	PP_5277/kauB	MFS transporter/4‑guanidinobutyraldehyde dehydrogenase
	?	NC_002947	= 6027984	41 (0.940)					intergenic (‑72/+39)	PP_5277/kauB	MFS transporter/4‑guanidinobutyraldehyde dehydrogenase
*	?	NC_002947	6030119 =	41 (0.780)	7 (0.140)	5/228	NT	16.3%	coding (9/261 nt)	PP_5729	hypothetical protein
	?	NC_002947	6030147 =	34 (0.700)					coding (37/261 nt)	PP_5729	hypothetical protein
*	?	NC_002947	= 6044644	46 (0.880)	3 (0.060)	3/238	NT	6.5%	coding (702/1608 nt)	PP_5297	amino acid transporter
	?	NC_002947	= 6044676	42 (0.830)					coding (670/1608 nt)	PP_5297	amino acid transporter
*	?	NC_002947	= 6055208	38 (0.720)	5 (0.100)	5/230	NT	11.8%	coding (105/732 nt)	tonB	TonB energy transducing system subunit TonB
	?	NC_002947	= 6055248	39 (0.790)					coding (145/732 nt)	tonB	TonB energy transducing system subunit TonB
*	?	NC_002947	= 6060500	56 (1.070)	5 (0.110)	5/218	NT	9.0%	intergenic (+80/+101)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
	?	NC_002947	= 6060559	52 (1.120)					intergenic (+139/+42)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
*	?	NC_002947	6067953 =	53 (1.010)	6 (0.120)	6/240	NT	10.7%	coding (540/1341 nt)	PP_5322	metal ion transporter
	?	NC_002947	6067980 =	48 (0.940)					coding (567/1341 nt)	PP_5322	metal ion transporter
*	?	NC_002947	= 6098913	50 (0.950)	3 (0.060)	3/228	NT	6.3%	coding (232/867 nt)	PP_5350	RpiR family transcriptional regulator
	?	NC_002947	= 6098932	43 (0.880)					coding (213/867 nt)	PP_5350	RpiR family transcriptional regulator
*	?	NC_002947	= 6109613	56 (1.070)	4 (0.080)	4/234	NT	7.1%	coding (81/972 nt)	PP_5359	CobW/P47K family protein
	?	NC_002947	= 6109629	51 (1.020)					coding (65/972 nt)	PP_5359	CobW/P47K family protein
*	?	NC_002947	= 6115179	47 (0.890)	4 (0.080)	4/224	NT	8.6%	coding (564/1287 nt)	PP_5365	fatty acid methyltransferase
	?	NC_002947	= 6115207	42 (0.880)					coding (536/1287 nt)	PP_5365	fatty acid methyltransferase
*	?	NC_002947	= 6125135	42 (0.800)	7 (0.140)	7/236	NT	15.3%	intergenic (‑271/‑127)	PP_5373/PP_5374	Rieske 2Fe‑2S family protein/choline/carnitine/betaine transporter family protein
	?	NC_002947	= 6125155	37 (0.730)					intergenic (‑291/‑107)	PP_5373/PP_5374	Rieske 2Fe‑2S family protein/choline/carnitine/betaine transporter family protein
*	?	NC_002947	= 6152896	37 (0.700)	5 (0.100)	5/230	NT	13.4%	coding (421/489 nt)	PP_5738	hypothetical protein
	?	NC_002947	= 6152922	30 (0.610)					coding (447/489 nt)	PP_5738	hypothetical protein
*	?	NC_002947	6175253 =	61 (1.160)	10 (0.200)	9/232	NT	15.4%	intergenic (‑21/+23)	atpC/atpD	ATP synthase subunit epsilon/ATP synthase subunit beta
	?	NC_002947	6175271 =	52 (1.050)					intergenic (‑39/+5)	atpC/atpD	ATP synthase subunit epsilon/ATP synthase subunit beta