mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | ||||||
|---|---|---|---|---|---|---|
| evidence | position | mutation | freq | annotation | gene | description |
| RA | 70 | C→T | 21.6% | intergenic (–/+77) | – / ← parB | –/chromosome‑partitioning protein |
| RA | 27,581 | C→T | 19.9% | intergenic (‑428/+18) | PP_0022 ← / ← PP_0023 | hypothetical protein/hypothetical protein |
| RA | 27,584 | A→G | 19.3% | intergenic (‑431/+15) | PP_0022 ← / ← PP_0023 | hypothetical protein/hypothetical protein |
| RA | 81,979 | A→G | 16.6% | I97V (ATC→GTC) | PP_0071 → | hypothetical protein |
| RA | 81,984 | G→C | 15.5% | E98D (GAG→GAC) | PP_0071 → | hypothetical protein |
| RA | 81,989 | C→T | 15.9% | T100M (ACG→ATG) | PP_0071 → | hypothetical protein |
| RA | 86,240 | G→T | 10.0% | L160M (CTG→ATG) | PP_0075 ← | choline sulfate transporter |
| RA | 126,115 | A→G | 13.2% | intergenic (+25/+25) | PP_0120 → / ← thrB | zinc ABC transporter/homoserine kinase |
| RA | 126,116 | C→T | 13.2% | intergenic (+26/+24) | PP_0120 → / ← thrB | zinc ABC transporter/homoserine kinase |
| RA | 150,828 | A→C | 9.6% | L41R (CTG→CGG) | PP_0142 ← | ABC transporter permease |
| RA | 152,157 | A→T | 19.0% | intergenic (‑51/+43) | PP_0143 ← / ← PP_0144 | membrane protein/insulinase family metalloprotease |
| RA | 152,158 | A→T | 19.0% | intergenic (‑52/+42) | PP_0143 ← / ← PP_0144 | membrane protein/insulinase family metalloprotease |
| RA | 170,295 | C→A | 21.1% | R233S (CGT→AGT) | PP_0159 → | family III CoA‑transferase |
| RA | 182,034 | Δ1 bp | 17.9% | intergenic (+23/+42) | PP_5SB → / ← PP_0160 | 5S ribosomal RNA/ferrioxamine receptor |
| RA | 182,036:1 | +C | 17.9% | intergenic (+25/+40) | PP_5SB → / ← PP_0160 | 5S ribosomal RNA/ferrioxamine receptor |
| RA | 195,559 | C→A | 27.2% | T355T (ACC→ACA) | PP_0168 → | putative surface adhesion protein |
| RA | 195,634 | C→T | 49.2% | T380T (ACC→ACT) | PP_0168 → | putative surface adhesion protein |
| RA | 195,724 | A→G | 9.5% | V410V (GTA→GTG) | PP_0168 → | putative surface adhesion protein |
| RA | 196,306 | T→C | 14.2% | N604N (AAT→AAC) | PP_0168 → | putative surface adhesion protein |
| RA | 196,327 | A→C | 25.0% | T611T (ACA→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 196,351 | C→G | 25.6% | T619T (ACC→ACG) | PP_0168 → | putative surface adhesion protein |
| RA | 197,089 | T→C | 11.0% | N865N (AAT→AAC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,551 | C→G | 9.4% | T1019T (ACC→ACG) | PP_0168 → | putative surface adhesion protein |
| RA | 197,572 | G→A | 9.3% | K1026K (AAG→AAA) | PP_0168 → | putative surface adhesion protein |
| RA | 197,590 | T→C | 10.8% | D1032D (GAT→GAC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,632 | T→C | 12.9% | T1046T (ACT→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 236,593 | G→A | 16.6% | A81V (GCC→GTC) | argH ← | argininosuccinate lyase |
| RA | 240,531 | G→C | 21.9% | A276P (GCC→CCC) | PP_0188 → | uroporphyrin‑III C‑methyltransferase |
| RA | 240,536 | G→C | 22.2% | G277G (GGG→GGC) | PP_0188 → | uroporphyrin‑III C‑methyltransferase |
| RA | 270,845 | T→A | 13.8% | L249Q (CTG→CAG) | PP_0218 → | sensory box protein |
| RA | 287,245 | G→T | 17.4% | T288T (ACC→ACA) | tauA ← | taurine ABC transporter substrate‑binding protein |
| RA | 322,135 | G→A | 17.8% | intergenic (+420/+38) | aguA → / ← PP_0267 | agmatine deiminase/ferric siderophore receptor |
| RA | 322,142 | T→C | 20.6% | intergenic (+427/+31) | aguA → / ← PP_0267 | agmatine deiminase/ferric siderophore receptor |
| RA | 344,044 | Δ1 bp | 14.7% | intergenic (+130/+59) | PP_5440 → / ← PP_t72 | hypothetical protein/tRNA‑Phe |
| RA | 344,048:1 | +T | 14.7% | intergenic (+134/+55) | PP_5440 → / ← PP_t72 | hypothetical protein/tRNA‑Phe |
| RA | 354,876 | A→C | 17.4% | F100C (TTC→TGC) | cbcW ← | choline/betaine/carnitine ABC transporter permease |
| RA | 354,881 | G→C | 17.4% | V98V (GTC→GTG) | cbcW ← | choline/betaine/carnitine ABC transporter permease |
| RA | 354,886 | G→T | 16.7% | Q97K (CAG→AAG) | cbcW ← | choline/betaine/carnitine ABC transporter permease |
| RA | 384,786 | C→G | 13.9% | R421G (CGC→GGC) | PP_0320 → | methyl‑accepting chemotaxis transducer |
| RA | 384,790 | A→T | 13.9% | N422I (AAT→ATT) | PP_0320 → | methyl‑accepting chemotaxis transducer |
| RA | 384,794 | C→G | 14.3% | A423A (GCC→GCG) | PP_0320 → | methyl‑accepting chemotaxis transducer |
| RA | 413,107 | C→G | 15.0% | A686A (GCC→GCG) | glnE → | glutamate‑ammonia‑ligase adenylyltransferase |
| RA | 413,108 | C→G | 14.3% | R687G (CGC→GGC) | glnE → | glutamate‑ammonia‑ligase adenylyltransferase |
| RA | 467,101 | A→G | 26.2% | intergenic (‑31/+22) | PP_5445 ← / ← PP_t71 | hypothetical protein/tRNA‑Met |
| RA | 467,104 | C→T | 19.0% | intergenic (‑34/+19) | PP_5445 ← / ← PP_t71 | hypothetical protein/tRNA‑Met |
| RA | 471,069 | T→C | 23.9% | intergenic (‑110/+18) | PP_0386 ← / ← rpoD | sensory box protein/RNA polymerase sigma 70 factor |
| RA | 471,070 | G→A | 23.9% | intergenic (‑111/+17) | PP_0386 ← / ← rpoD | sensory box protein/RNA polymerase sigma 70 factor |
| RA | 471,125 | T→G | 19.3% | T605P (ACT→CCT) | rpoD ← | RNA polymerase sigma 70 factor |
| RA | 626,559 | T→G | 17.9% | K213Q (AAG→CAG) | dedA ← | inner membrane protein |
| RA | 634,115 | Δ1 bp | 21.1% | coding (418/2016 nt) | PP_0546 → | sigma‑54 dependent transcriptional regulator |
| RA | 634,122 | A→T | 23.6% | Q142L (CAG→CTG) | PP_0546 → | sigma‑54 dependent transcriptional regulator |
| RA | 634,128:1 | +C | 22.2% | coding (431/2016 nt) | PP_0546 → | sigma‑54 dependent transcriptional regulator |
| RA | 672,370 | T→G | 23.1% | G474G (GGT→GGG) | PP_0573 → | hypothetical protein |
| RA | 672,373 | C→A | 23.9% | Y475* (TAC→TAA) | PP_0573 → | hypothetical protein |
| RA | 702,766:1 | +G | 17.9% | intergenic (+11/‑121) | PP_23SD → / → PP_5SD | 23S ribosomal RNA/5S ribosomal RNA |
| RA | 702,769 | Δ1 bp | 17.2% | intergenic (+14/‑118) | PP_23SD → / → PP_5SD | 23S ribosomal RNA/5S ribosomal RNA |
| RA | 711,631 | C→T | 12.9% | P476S (CCG→TCG) | ileS → | isoleucine‑‑tRNA ligase |
| RA | 743,463 | A→G | 15.5% | intergenic (+139/+135) | PP_0635 → / ← PP_0636 | group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein |
| RA | 813,451 | G→A | 9.3% | A312V (GCC→GTC) | PP_0700 ← | transmembrane sensor |
| RA | 873,421 | G→A | 18.3% | G18S (GGC→AGC) | PP_5457 → | hypothetical protein |
| RA | 873,428 | T→C | 20.6% | L20P (CTT→CCT) | PP_5457 → | hypothetical protein |
| RA | 874,554 | T→C | 16.6% | Y44H (TAC→CAC) | PP_0759 → | hypothetical protein |
| RA | 919,675 | G→C | 50.0% | intergenic (‑143/+48) | PP_5458 ← / ← PP_0800 | hypothetical protein/hypothetical protein |
| RA | 941,936 | A→G | 14.1% | V1230A (GTC→GCC) | PP_0806 ← | surface adhesion protein |
| RA | 941,939 | A→T | 11.6% | V1229D (GTC→GAC) | PP_0806 ← | surface adhesion protein |
| RA | 941,942 | C→T | 11.4% | G1228D (GGC→GAC) | PP_0806 ← | surface adhesion protein |
| RA | 955,155 | T→A | 30.8% | intergenic (+106/‑207) | cyoE → / → alaC | protoheme IX farnesyltransferase/aminotransferase |
| RA | 960,155 | A→G | 16.3% | intergenic (+10/+116) | PP_0821 → / ← selU | hypothetical protein/tRNA 2‑selenouridine synthase |
| RA | 966,598 | A→T | 15.7% | L41* (TTG→TAG) ‡ | PP_0828 ← | membrane protein |
| RA | 966,599 | A→T | 14.8% | L41M (TTG→ATG) ‡ | PP_0828 ← | membrane protein |
| RA | 972,949 | G→A | 13.3% | R413H (CGC→CAC) | secD → | protein translocase subunit SecD |
| RA | 991,557 | G→A | 14.8% | G59D (GGT→GAT) | der → | GTPase Der |
| RA | 991,560 | T→C | 14.9% | I60T (ATC→ACC) | der → | GTPase Der |
| RA | 991,569 | A→T | 14.5% | D63V (GAC→GTC) | der → | GTPase Der |
| RA | 1,013,231 | A→T | 25.0% | intergenic (+56/+75) | prfC → / ← potF‑I | peptide chain release factor 3/putrescine‑binding protein |
| RA | 1,090,034 | C→A | 23.9% | P297Q (CCG→CAG) | fumC‑I → | class 2 fumarate hydratase |
| RA | 1,090,037 | T→G | 22.8% | L298R (CTG→CGG) | fumC‑I → | class 2 fumarate hydratase |
| RA | 1,125,010 | C→T | 10.0% | E46E (GAG→GAA) | gcvT‑I ← | aminomethyltransferase |
| RA | 1,142,117 | G→A | 16.7% | F106F (TTC→TTT) | arcD‑I ← | arginine/ornithine antiporter |
| RA | 1,182,863 | A→T | 16.0% | intergenic (+24/+70) | tadA → / ← mltF | tRNA adenosine(34) deaminase TadA/membrane‑bound lytic murein transglycosylase F |
| RA | 1,182,864 | A→T | 16.0% | intergenic (+25/+69) | tadA → / ← mltF | tRNA adenosine(34) deaminase TadA/membrane‑bound lytic murein transglycosylase F |
| RA | 1,184,591 | G→C | 18.8% | intergenic (‑201/‑211) | mltF ← / → purL | membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase |
| RA | 1,184,594 | G→C | 18.8% | intergenic (‑204/‑208) | mltF ← / → purL | membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase |
| RA | 1,190,651 | T→C | 20.4% | L56P (CTG→CCG) | xcpX → | type II secretion system protein K |
| RA | 1,190,655 | C→A | 21.0% | A57A (GCC→GCA) | xcpX → | type II secretion system protein K |
| RA | 1,190,658 | T→G | 19.1% | Y58* (TAT→TAG) | xcpX → | type II secretion system protein K |
| RA | 1,190,662 | G→A | 19.9% | G60R (GGG→AGG) | xcpX → | type II secretion system protein K |
| RA | 1,190,666 | A→C | 22.2% | Q61P (CAG→CCG) | xcpX → | type II secretion system protein K |
| RA | 1,219,155 | A→G | 16.0% | D229G (GAC→GGC) ‡ | PP_1064 → | alpha/beta family hydrolase |
| RA | 1,219,156 | C→T | 16.3% | D229D (GAC→GAT) ‡ | PP_1064 → | alpha/beta family hydrolase |
| RA | 1,327,127 | C→T | 63.2% | intergenic (+97/‑196) | PP_16SE → / → PP_23SE | 16S ribosomal RNA/23S ribosomal RNA |
| RA | 1,376,327 | A→T | 11.1% | intergenic (+30/+19) | kup → / ← PP_1201 | potassium transport system protein Kup/hypothetical protein |
| RA | 1,376,328 | G→C | 11.1% | intergenic (+31/+18) | kup → / ← PP_1201 | potassium transport system protein Kup/hypothetical protein |
| RA | 1,376,329 | A→T | 11.1% | intergenic (+32/+17) | kup → / ← PP_1201 | potassium transport system protein Kup/hypothetical protein |
| RA | 1,382,332 | A→T | 33.3% | intergenic (+12/+15) | dinB → / ← PP_1204 | DNA polymerase IV/lipoprotein |
| RA | 1,425,657 | T→C | 18.7% | intergenic (+52/‑453) | PP_1249 → / → PP_1250 | DUF4223 domain‑containing protein/group II intron‑encoding maturase |
| RA | 1,436,102 | C→T | 13.8% | intergenic (‑132/+21) | PP_1256 ← / ← PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase |
| RA | 1,468,175 | A→T | 12.6% | V175D (GTC→GAC) | algE ← | alginate production protein AlgE |
| RA | 1,518,500 | G→A | 13.8% | L55L (CTG→CTA) | murF → | D‑alanyl‑D‑alanine‑adding enzyme |
| RA | 1,526,622 | T→A | 11.7% | I256N (ATT→AAT) | ddlB → | D‑alanine‑‑D‑alanine ligase B |
| RA | 1,534,935 | C→T | 8.9% | intergenic (+84/‑99) | secA → / → argJ | protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase |
| RA | 1,534,940 | A→G | 9.1% | intergenic (+89/‑94) | secA → / → argJ | protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase |
| RA | 1,534,944 | G→A | 9.1% | intergenic (+93/‑90) | secA → / → argJ | protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase |
| RA | 1,550,517 | T→G | 25.2% | I292S (ATC→AGC) | groL → | chaperonin GroEL |
| RA | 1,550,520 | C→A | 24.1% | A293D (GCT→GAT) | groL → | chaperonin GroEL |
| RA | 1,571,703 | C→T | 12.1% | P361L (CCG→CTG) | pcaT → | alpha‑ketoglutarate permease |
| RA | 1,606,449 | A→T | 17.4% | intergenic (‑157/+54) | PP_1407 ← / ← PP_t64 | sulfate transporter/tRNA‑Gly |
| RA | 1,606,450 | A→T | 17.4% | intergenic (‑158/+53) | PP_1407 ← / ← PP_t64 | sulfate transporter/tRNA‑Gly |
| RA | 1,637,367 | A→T | 20.0% | intergenic (+34/+32) | pdxJ → / ← PP_1437 | pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase |
| RA | 1,637,368 | A→T | 20.0% | intergenic (+35/+31) | pdxJ → / ← PP_1437 | pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase |
| RA | 1,661,519 | C→A | 14.8% | A50D (GCC→GAC) | PP_1456 → | membrane protein |
| RA | 1,661,522 | T→A | 13.8% | L51Q (CTG→CAG) | PP_1456 → | membrane protein |
| RA | 1,661,525 | T→G | 13.8% | V52G (GTC→GGC) | PP_1456 → | membrane protein |
| RA | 1,667,950 | A→C | 17.0% | I304L (ATC→CTC) | ffh → | signal recognition particle GTPase subunit |
| RA | 1,667,955 | G→T | 14.9% | E305D (GAG→GAT) | ffh → | signal recognition particle GTPase subunit |
| RA | 1,667,961 | C→T | 14.8% | A307A (GCC→GCT) | ffh → | signal recognition particle GTPase subunit |
| RA | 1,690,454 | G→A | 21.2% | T140M (ACG→ATG) ‡ | ydcS ← | polyamine ABC transporter, periplasmic polyamine‑binding protein |
| RA | 1,690,455 | T→C | 21.8% | T140A (ACG→GCG) ‡ | ydcS ← | polyamine ABC transporter, periplasmic polyamine‑binding protein |
| RA | 1,698,852 | Δ1 bp | 24.1% | coding (558/1014 nt) | cheBC → | chemotaxis response regulator protein‑glutamate methylesterase |
| RA | 1,698,856:1 | +C | 22.6% | coding (562/1014 nt) | cheBC → | chemotaxis response regulator protein‑glutamate methylesterase |
| RA | 1,703,294:1 | +T | 25.0% | intergenic (+101/‑66) | lysS → / → PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| RA | 1,707,269 | G→C | 17.9% | intergenic (+45/+97) | PP_1501 → / ← PP_1502 | hypothetical protein/OmpA family protein |
| RA | 1,707,272 | G→C | 17.9% | intergenic (+48/+94) | PP_1501 → / ← PP_1502 | hypothetical protein/OmpA family protein |
| RA | 1,726,527 | A→T | 20.0% | L560Q (CTG→CAG) | plsB ← | glycerol‑3‑phosphate acyltransferase |
| RA | 1,726,530 | A→T | 19.6% | L559Q (CTG→CAG) | plsB ← | glycerol‑3‑phosphate acyltransferase |
| RA | 1,809,283 | G→T | 14.8% | D98Y (GAC→TAC) | eno → | enolase |
| RA | 1,825,133 | G→C | 13.4% | R55G (CGC→GGC) | mutS ← | DNA mismatch repair protein MutS |
| RA | 1,825,134 | G→C | 13.4% | A54A (GCC→GCG) | mutS ← | DNA mismatch repair protein MutS |
| RA | 1,852,047 | C→A | 100% | A364D (GCC→GAC) | relA → | ATP:GTP 3'‑pyrophosphotransferase |
| RA | 1,859,504 | A→T | 14.3% | intergenic (‑54/+102) | PP_1662 ← / ← PP_1663 | hypothetical protein/hypothetical protein |
| RA | 1,859,505 | A→T | 14.3% | intergenic (‑55/+101) | PP_1662 ← / ← PP_1663 | hypothetical protein/hypothetical protein |
| RA | 1,864,792 | T→C | 16.7% | A28A (GCT→GCC) | hda → | DnaA regulatory inactivator Hda |
| RA | 1,939,163 | A→C | 27.3% | intergenic (‑65/‑114) | PP_1738 ← / → PP_1739 | hypothetical protein/membrane protein |
| RA | 1,939,164 | G→T | 27.4% | intergenic (‑66/‑113) | PP_1738 ← / → PP_1739 | hypothetical protein/membrane protein |
| RA | 1,948,216 | C→G | 21.4% | R494R (CGG→CGC) | PP_1749 ← | acetyltransferase |
| RA | 1,960,142 | T→A | 29.2% | intergenic (+50/‑78) | bolA → / → PP_1758 | DNA‑binding transcriptional dual regulator/rhodanese‑like domain‑containing sulfurtransferase |
| RA | 2,088,283:1 | +A | 26.7% | coding (1212/1347 nt) | aroH ← | 3‑deoxy‑7‑phosphoheptulonate synthase |
| RA | 2,088,289 | Δ1 bp | 28.6% | coding (1206/1347 nt) | aroH ← | 3‑deoxy‑7‑phosphoheptulonate synthase |
| RA | 2,166,687 | T→A | 15.6% | intergenic (‑488/‑293) | PP_5483 ← / → PP_1921 | hypothetical protein/hypothetical protein |
| RA | 2,208,180 | A→T | 13.9% | N117Y (AAT→TAT) | PP_1951 → | short‑chain dehydrogenase/reductase family oxidoreductase |
| RA | 2,208,183 | A→T | 14.3% | M118L (ATG→TTG) | PP_1951 → | short‑chain dehydrogenase/reductase family oxidoreductase |
| RA | 2,252,856 | T→A | 13.6% | intergenic (+69/‑50) | leuD → / → PP_1987 | 3‑isopropylmalate dehydratase small subunit/UbiE/COQ5 family methlytransferase |
| RA | 2,252,857 | T→A | 13.6% | intergenic (+70/‑49) | leuD → / → PP_1987 | 3‑isopropylmalate dehydratase small subunit/UbiE/COQ5 family methlytransferase |
| RA | 2,282,813 | T→G | 34.1% | intergenic (‑162/+67) | PP_2010 ← / ← PP_2011 | cytochrome b561/hypothetical protein |
| RA | 2,282,817 | G→C | 20.6% | intergenic (‑166/+63) | PP_2010 ← / ← PP_2011 | cytochrome b561/hypothetical protein |
| RA | 2,282,818 | G→C | 20.7% | intergenic (‑167/+62) | PP_2010 ← / ← PP_2011 | cytochrome b561/hypothetical protein |
| RA | 2,282,822 | C→A | 19.0% | intergenic (‑171/+58) | PP_2010 ← / ← PP_2011 | cytochrome b561/hypothetical protein |
| RA | 2,386,427 | A→C | 10.9% | R240R (CGT→CGG) | PP_2094 ← | nitrate‑binding protein NasS |
| RA | 2,386,430 | G→T | 11.8% | A239A (GCC→GCA) | PP_2094 ← | nitrate‑binding protein NasS |
| RA | 2,388,295 | A→T | 13.8% | M338L (ATG→TTG) | pyrD → | dihydroorotate dehydrogenase |
| RA | 2,406,095 | C→A | 12.9% | Y71* (TAC→TAA) | PP_2110 → | ribosomal large subunit pseudouridine synthase |
| RA | 2,517,645 | T→C | 14.3% | S8P (TCC→CCC) | PP_2211 → | AraC family transcriptional regulator |
| RA | 2,563,405 | C→T | 13.3% | P367L (CCC→CTC) | dauA → | FAD‑dependent catabolic D‑arginine dehydrogenase |
| RA | 2,563,408 | A→G | 13.3% | E368G (GAG→GGG) | dauA → | FAD‑dependent catabolic D‑arginine dehydrogenase |
| RA | 2,584,833 | C→G | 14.3% | Q235H (CAG→CAC) | folD‑II ← | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase |
| RA | 2,654,922 | G→A | 18.2% | A190T (GCC→ACC) | cysB → | transcriptional regulator CysB |
| RA | 2,709,494 | C→A | 20.1% | C10* (TGC→TGA) | PP_2372 → | sugar‑binding protein |
| RA | 2,812,818 | C→T | 10.5% | intergenic (+69/‑41) | rplT → / → pheS | 50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha |
| RA | 2,812,821 | C→G | 10.3% | intergenic (+72/‑38) | rplT → / → pheS | 50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha |
| RA | 2,812,824 | A→G | 9.8% | intergenic (+75/‑35) | rplT → / → pheS | 50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha |
| RA | 2,863,872 | T→G | 17.5% | S297A (TCG→GCG) ‡ | gllR → | HTH‑type transcriptional regulator GalR |
| RA | 2,863,873 | C→A | 13.7% | S297* (TCG→TAG) ‡ | gllR → | HTH‑type transcriptional regulator GalR |
| RA | 2,868,919 | G→C | 15.4% | intergenic (+415/‑516) | PP_2520 → / → PP_2522 | hypothetical protein/transposase |
| RA | 2,868,920 | G→C | 16.6% | intergenic (+416/‑515) | PP_2520 → / → PP_2522 | hypothetical protein/transposase |
| RA | 2,935,901 | C→G | 15.4% | intergenic (+153/‑109) | PP_2568 → / → PP_2569 | ring‑cleaving dioxygenase/MHS family metabolite MFS transporter |
| RA | 2,951,377 | G→C | 17.9% | intergenic (‑113/+48) | oguA ← / ← PP_2585 | 8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase |
| RA | 2,951,384 | A→C | 19.3% | intergenic (‑120/+41) | oguA ← / ← PP_2585 | 8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase |
| RA | 2,951,385 | G→T | 19.2% | intergenic (‑121/+40) | oguA ← / ← PP_2585 | 8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase |
| RA | 2,951,392 | G→C | 15.4% | intergenic (‑128/+33) | oguA ← / ← PP_2585 | 8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase |
| RA | 2,973,302 | Δ1 bp | 7.8% | coding (615/1713 nt) | PP_2600 ← | hypothetical protein |
| RA | 2,973,308:1 | +T | 12.0% | coding (609/1713 nt) | PP_2600 ← | hypothetical protein |
| RA | 2,981,913 | G→T | 16.0% | F165L (TTC→TTA) | PP_2607 ← | hypothetical protein |
| RA | 2,982,735 | C→G | 15.5% | G163R (GGT→CGT) | PP_2608 ← | shikimate dehydrogenase family protein |
| RA | 2,982,740 | C→G | 13.4% | R161P (CGC→CCC) | PP_2608 ← | shikimate dehydrogenase family protein |
| RA | 3,020,312 | A→C | 12.9% | A269A (GCA→GCC) | PP_2638 → | cellulose synthase operon protein C |
| RA | 3,020,315 | G→C | 12.9% | W270C (TGG→TGC) | PP_2638 → | cellulose synthase operon protein C |
| RA | 3,020,318 | G→T | 12.5% | Q271H (CAG→CAT) | PP_2638 → | cellulose synthase operon protein C |
| RA | 3,189,321 | G→C | 28.6% | L458V (CTG→GTG) | PP_2799 ← | class III aminotransferase |
| RA | 3,189,322 | G→C | 28.7% | H457Q (CAC→CAG) | PP_2799 ← | class III aminotransferase |
| RA | 3,223,256 | A→G | 21.9% | intergenic (‑520/+40) | PP_2823 ← / ← PP_2824 | methyl‑accepting chemotaxis transducer/TetR family transcriptional regulator |
| RA | 3,236,191 | G→T | 17.8% | G415C (GGT→TGT) ‡ | PP_2834 → | D‑galactarate dehydratase/altronate dehydratase |
| RA | 3,236,193 | T→A | 17.9% | G415G (GGT→GGA) ‡ | PP_2834 → | D‑galactarate dehydratase/altronate dehydratase |
| RA | 3,236,195 | A→C | 17.8% | Q416P (CAG→CCG) | PP_2834 → | D‑galactarate dehydratase/altronate dehydratase |
| RA | 3,251,238 | A→G | 16.7% | Q12R (CAG→CGG) | ureF → | urease accessory protein |
| RA | 3,286,493 | T→G | 11.8% | N154K (AAT→AAG) | PP_2888 → | ECF family RNA polymerase sigma factor PrtI |
| RA | 3,286,496 | C→A | 12.1% | A155A (GCC→GCA) | PP_2888 → | ECF family RNA polymerase sigma factor PrtI |
| RA | 3,313,868 | C→A | 20.1% | intergenic (+30/‑129) | hemB → / → proP | 5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease |
| RA | 3,313,871 | T→G | 18.2% | intergenic (+33/‑126) | hemB → / → proP | 5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease |
| RA | 3,345,870 | C→T | 11.4% | A225T (GCC→ACC) | PP_2942 ← | two‑component system response regulator |
| RA | 3,395,386 | G→C | 22.8% | G282R (GGC→CGC) ‡ | PP_2998 → | 2‑dehydropantoate 2‑reductase |
| RA | 3,395,387 | G→C | 24.2% | G282A (GGC→GCC) ‡ | PP_2998 → | 2‑dehydropantoate 2‑reductase |
| RA | 3,430,200:1 | +T | 13.8% | coding (375/1164 nt) | PP_3045 → | ATP‑dependent protease ClpP |
| RA | 3,430,204 | Δ1 bp | 12.9% | coding (379/1164 nt) | PP_3045 → | ATP‑dependent protease ClpP |
| RA | 3,522,760 | G→A | 13.3% | intergenic (+504/‑193) | PP_5584 → / → PP_3113 | hypothetical protein/transposase |
| RA | 3,522,762 | Δ1 bp | 13.3% | intergenic (+506/‑191) | PP_5584 → / → PP_3113 | hypothetical protein/transposase |
| RA | 3,522,764 | A→G | 13.3% | intergenic (+508/‑189) | PP_5584 → / → PP_3113 | hypothetical protein/transposase |
| RA | 3,528,609 | T→A | 18.4% | L128Q (CTG→CAG) | dnaEB → | error‑prone DNA polymerase |
| RA | 3,528,612 | T→A | 18.4% | L129Q (CTG→CAG) | dnaEB → | error‑prone DNA polymerase |
| RA | 3,561,238 | T→C | 16.0% | V317A (GTG→GCG) | tdcG‑III → | L‑serine dehydratase |
| RA | 3,624,187 | G→C | 14.0% | intergenic (‑92/+81) | PP_3194 ← / ← PP_3195 | hypothetical protein/hypothetical protein |
| RA | 3,624,901 | C→T | 16.7% | L210L (CTG→CTA) ‡ | PP_3195 ← | hypothetical protein |
| RA | 3,624,902 | A→G | 16.7% | L210P (CTG→CCG) ‡ | PP_3195 ← | hypothetical protein |
| RA | 3,655,511 | C→G | 17.4% | A309P (GCC→CCC) | PP_3220 ← | ABC transporter ATP‑binding protein |
| RA | 3,763,545 | A→G | 16.6% | intergenic (+22/+1653) | PP_3326 → / ← PP_3328 | hypothetical protein/ring‑cleaving dioxygenase |
| RA | 3,763,547 | G→C | 15.8% | intergenic (+24/+1651) | PP_3326 → / ← PP_3328 | hypothetical protein/ring‑cleaving dioxygenase |
| RA | 3,763,549 | C→T | 16.7% | intergenic (+26/+1649) | PP_3326 → / ← PP_3328 | hypothetical protein/ring‑cleaving dioxygenase |
| RA | 3,816,546 | A→T | 16.0% | G106G (GGT→GGA) | cpxR ← | two‑component system regulator CpxR |
| RA | 3,816,549 | G→C | 15.8% | P105P (CCC→CCG) | cpxR ← | two‑component system regulator CpxR |
| RA | 3,833,384 | C→A | 14.8% | P2P (CCC→CCA) | vgrG‑II → | type VI secretion system protein |
| RA | 3,850,090 | A→C | 16.0% | Q604P (CAG→CCG) | PP_3397 → | hypothetical protein |
| RA | 3,851,001 | A→C | 12.1% | N147H (AAT→CAT) | PP_3398 → | curli fiber surface‑exposed nucleator CsgB |
| RA | 3,851,004 | G→T | 12.4% | G148C (GGC→TGC) | PP_3398 → | curli fiber surface‑exposed nucleator CsgB |
| RA | 3,853,162 | T→A | 21.8% | I169N (ATT→AAT) | alkB → | alpha‑ketoglutarate‑ and Fe(II)‑dependent dioxygenase |
| RA | 3,882,868 | C→T | 18.2% | intergenic (+67/‑158) | oprN → / → PP_3428 | multidrug RND transporter outer membrane protein OprN/TPR repeat‑containing protein |
| RA | 3,908,672 | G→A | 13.8% | A193T (GCC→ACC) | PP_3450 → | TPR repeat‑containing protein |
| RA | 3,989,552 | C→G | 12.5% | P676A (CCC→GCC) | oplA → | 5‑oxoprolinase A |
| RA | 3,989,557 | C→G | 12.1% | G677G (GGC→GGG) | oplA → | 5‑oxoprolinase A |
| RA | 4,080,963 | A→T | 15.4% | intergenic (‑143/+20) | amaC ← / ← dpkA | D‑lysine aminotransferase/delta 1‑piperideine‑2‑carboxylate reductase |
| RA | 4,080,964 | A→T | 15.1% | intergenic (‑144/+19) | amaC ← / ← dpkA | D‑lysine aminotransferase/delta 1‑piperideine‑2‑carboxylate reductase |
| RA | 4,080,978 | C→T | 16.2% | intergenic (‑158/+5) | amaC ← / ← dpkA | D‑lysine aminotransferase/delta 1‑piperideine‑2‑carboxylate reductase |
| RA | 4,082,784 | C→A | 22.2% | L229M (CTG→ATG) ‡ | PP_3592 → | RpiR family transcriptional regulator |
| RA | 4,082,785 | T→G | 22.3% | L229R (CTG→CGG) ‡ | PP_3592 → | RpiR family transcriptional regulator |
| RA | 4,134,021 | T→A | 8.5% | A351A (GCA→GCT) ‡ | PP_3638 ← | acyl‑CoA dehydrogenase |
| RA | 4,134,023 | C→G | 8.5% | A351P (GCA→CCA) ‡ | PP_3638 ← | acyl‑CoA dehydrogenase |
| RA | 4,134,025 | T→A | 8.5% | Q350L (CAG→CTG) | PP_3638 ← | acyl‑CoA dehydrogenase |
| RA | 4,160,540 | A→G | 11.8% | E412E (GAA→GAG) | PP_3662 → | hypothetical protein |
| RA | 4,163,542 | T→C | 12.5% | intergenic (‑37/‑145) | pssA ← / → PP_3665 | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/AraC family transcriptional regulator |
| RA | 4,163,546 | T→G | 12.5% | intergenic (‑41/‑141) | pssA ← / → PP_3665 | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/AraC family transcriptional regulator |
| RA | 4,163,549 | C→A | 12.1% | intergenic (‑44/‑138) | pssA ← / → PP_3665 | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/AraC family transcriptional regulator |
| RA | 4,163,553 | G→A | 14.7% | intergenic (‑48/‑134) | pssA ← / → PP_3665 | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/AraC family transcriptional regulator |
| RA | 4,170,226 | A→T | 16.6% | intergenic (‑290/‑97) | katG ← / → PP_3669 | catalase‑peroxidase/LysR family transcriptional regulator |
| RA | 4,221,231 | G→T | 28.8% | intergenic (+46/+216) | PP_3699 → / ← PP_3700 | hypothetical protein/chromosome partitioning ATPase |
| RA | 4,221,233 | A→T | 23.5% | intergenic (+48/+214) | PP_3699 → / ← PP_3700 | hypothetical protein/chromosome partitioning ATPase |
| RA | 4,221,235 | A→C | 23.6% | intergenic (+50/+212) | PP_3699 → / ← PP_3700 | hypothetical protein/chromosome partitioning ATPase |
| RA | 4,240,286 | T→G | 12.5% | R16S (AGA→AGC) | PP_3717 ← | LuxR family transcriptional regulator |
| RA | 4,240,291 | C→A | 13.3% | A15S (GCT→TCT) | PP_3717 ← | LuxR family transcriptional regulator |
| RA | 4,240,297 | A→G | 13.8% | W13R (TGG→CGG) | PP_3717 ← | LuxR family transcriptional regulator |
| RA | 4,244,402 | G→C | 14.6% | S221R (AGC→AGG) | aruH ← | arginine‑‑pyruvate transaminase AruH |
| RA | 4,337,477 | A→G | 13.6% | S25G (AGC→GGC) | PP_3812 → | lipase |
| RA | 4,338,437 | T→A | 16.1% | intergenic (+13/+129) | PP_3812 → / ← PP_5632 | lipase/allo‑isoleucine metabolism protein |
| RA | 4,338,447 | T→C | 16.3% | intergenic (+23/+119) | PP_3812 → / ← PP_5632 | lipase/allo‑isoleucine metabolism protein |
| RA | 4,338,448 | G→A | 17.5% | intergenic (+24/+118) | PP_3812 → / ← PP_5632 | lipase/allo‑isoleucine metabolism protein |
| RA | 4,348,749 | A→G | 54.2% | intergenic (‑70/+404) | PP_3820 ← / ← galU | group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase |
| RA | 4,357,790 | T→C | 20.5% | intergenic (+92/‑162) | PP_3831 → / → PP_3832 | hypothetical protein/CsrA‑like carbon storage regulator |
| RA | 4,357,791 | G→A | 20.1% | intergenic (+93/‑161) | PP_3831 → / → PP_3832 | hypothetical protein/CsrA‑like carbon storage regulator |
| RA | 4,410,822 | G→C | 21.0% | H121Q (CAC→CAG) | PP_3894 ← | replication protein O |
| RA | 4,470,272 | A→C | 9.3% | V321G (GTG→GGG) | PP_3961 ← | transporter |
| RA | 4,470,276 | T→C | 9.1% | I320V (ATC→GTC) | PP_3961 ← | transporter |
| RA | 4,470,281 | G→A | 8.5% | T318I (ACC→ATC) | PP_3961 ← | transporter |
| RA | 4,470,285 | G→T | 9.7% | P317T (CCG→ACG) | PP_3961 ← | transporter |
| RA | 4,528,590 | C→T | 14.2% | A49V (GCC→GTC) | PP_4017 → | hypothetical protein |
| RA | 4,532,619 | G→C | 16.1% | A103P (GCC→CCC) | PP_4020 → | oxidoreductase |
| RA | 4,532,626 | T→C | 12.9% | M105T (ATG→ACG) ‡ | PP_4020 → | oxidoreductase |
| RA | 4,532,627 | G→A | 12.9% | M105I (ATG→ATA) ‡ | PP_4020 → | oxidoreductase |
| RA | 4,553,312 | A→T | 9.5% | L553Q (CTG→CAG) | PP_4041 ← | glycoside hydrolase |
| RA | 4,553,315 | A→T | 9.5% | L552Q (CTG→CAG) | PP_4041 ← | glycoside hydrolase |
| RA | 4,730,087 | C→G | 18.6% | G468A (GGC→GCC) | lpdG ← | dihydrolipoyl dehydrogenase |
| RA | 4,730,172 | T→C | 15.4% | S440G (AGT→GGT) | lpdG ← | dihydrolipoyl dehydrogenase |
| RA | 4,730,173 | G→A | 16.6% | T439T (ACC→ACT) | lpdG ← | dihydrolipoyl dehydrogenase |
| RA | 4,741,273:1 | +C | 100% | intergenic (+464/+288) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,275 | A→G | 100% | intergenic (+466/+286) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,277 | C→T | 100% | intergenic (+468/+284) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,280 | C→T | 100% | intergenic (+471/+281) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,283 | C→G | 100% | intergenic (+474/+278) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,285 | 2 bp→CT | 100% | intergenic (+476/+275) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,812,228 | C→T | 13.1% | intergenic (+103/‑290) | PP_4238 → / → PP_5665 | hypothetical protein/McbA family microcin B17‑like processing protein |
| RA | 4,812,229 | A→T | 13.3% | intergenic (+104/‑289) | PP_4238 → / → PP_5665 | hypothetical protein/McbA family microcin B17‑like processing protein |
| RA | 4,812,230 | A→G | 13.3% | intergenic (+105/‑288) | PP_4238 → / → PP_5665 | hypothetical protein/McbA family microcin B17‑like processing protein |
| RA | 4,875,244 | G→A | 23.5% | V129V (GTG→GTA) | PP_4284 → | transporter |
| RA | 4,875,514 | G→A | 17.4% | M219I (ATG→ATA) | PP_4284 → | transporter |
| RA | 4,900,096 | G→A | 19.1% | intergenic (+12/‑486) | PP_4308 → / → PP_4309 | AsnC family transcriptional regulator/NCS1 family transporter |
| RA | 4,900,110 | A→G | 20.7% | intergenic (+26/‑472) | PP_4308 → / → PP_4309 | AsnC family transcriptional regulator/NCS1 family transporter |
| RA | 4,900,114 | G→A | 14.8% | intergenic (+30/‑468) | PP_4308 → / → PP_4309 | AsnC family transcriptional regulator/NCS1 family transporter |
| RA | 4,900,115 | T→C | 14.8% | intergenic (+31/‑467) | PP_4308 → / → PP_4309 | AsnC family transcriptional regulator/NCS1 family transporter |
| RA | 4,900,119 | C→T | 15.4% | intergenic (+35/‑463) | PP_4308 → / → PP_4309 | AsnC family transcriptional regulator/NCS1 family transporter |
| RA | 4,918,010 | G→A | 14.8% | V122I (GTC→ATC) ‡ | PP_4328 → | hypothetical protein |
| RA | 4,918,011 | T→C | 14.3% | V122A (GTC→GCC) ‡ | PP_4328 → | hypothetical protein |
| RA | 4,948,680 | Δ1 bp | 27.3% | coding (213/435 nt) | fliO ← | flagellar protein FliO |
| RA | 4,979,833 | T→A | 14.8% | D141V (GAC→GTC) | flgF ← | flagellar basal‑body rod protein FlgF |
| RA | 5,030,796 | A→G | 14.7% | intergenic (+34/‑461) | PP_4433 → / → dadA‑I | amino acid MFS transporter/D‑amino acid dehydrogenase small subunit |
| RA | 5,030,799 | C→T | 15.1% | intergenic (+37/‑458) | PP_4433 → / → dadA‑I | amino acid MFS transporter/D‑amino acid dehydrogenase small subunit |
| RA | 5,079,174 | T→A | 19.1% | intergenic (‑371/+26) | mgtE ← / ← PP_t56 | magnesium transporter/tRNA‑Arg |
| RA | 5,079,177 | T→A | 20.0% | intergenic (‑374/+23) | mgtE ← / ← PP_t56 | magnesium transporter/tRNA‑Arg |
| RA | 5,169,767 | A→C | 13.8% | D446A (GAC→GCC) | PP_4547 → | glutamine synthetase |
| RA | 5,169,772 | C→T | 20.7% | R448C (CGC→TGC) | PP_4547 → | glutamine synthetase |
| RA | 5,169,775 | T→A | 20.7% | W449R (TGG→AGG) | PP_4547 → | glutamine synthetase |
| RA | 5,169,782 | T→A | 23.1% | L451Q (CTG→CAG) | PP_4547 → | glutamine synthetase |
| RA | 5,169,785 | A→G | 24.0% | H452R (CAC→CGC) | PP_4547 → | glutamine synthetase |
| RA | 5,169,790 | G→T | 16.4% | A454S (GCC→TCC) | PP_4547 → | glutamine synthetase |
| RA | 5,173,292 | T→C | 20.8% | intergenic (‑285/+47) | fadD‑I ← / ← fadD‑II | long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase |
| RA | 5,173,295 | G→C | 20.7% | intergenic (‑288/+44) | fadD‑I ← / ← fadD‑II | long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase |
| RA | 5,173,296 | G→C | 21.2% | intergenic (‑289/+43) | fadD‑I ← / ← fadD‑II | long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase |
| RA | 5,173,299 | G→A | 21.0% | intergenic (‑292/+40) | fadD‑I ← / ← fadD‑II | long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase |
| RA | 5,194,935 | T→G | 26.4% | intergenic (+29/+24) | PP_4574 → / ← PP_4575 | hypothetical protein/urea amidolyase‑like protein |
| RA | 5,194,936 | C→A | 24.9% | intergenic (+30/+23) | PP_4574 → / ← PP_4575 | hypothetical protein/urea amidolyase‑like protein |
| RA | 5,203,029 | C→A | 12.5% | L430M (CTG→ATG) ‡ | PP_4583 → | putative Peptidase |
| RA | 5,203,030 | T→G | 12.1% | L430R (CTG→CGG) ‡ | PP_4583 → | putative Peptidase |
| RA | 5,209,536 | G→T | 13.8% | A216E (GCA→GAA) | rnd ← | ribonuclease D |
| RA | 5,232,102 | C→G | 13.5% | A214A (GCG→GCC) | PP_4610 ← | PepSY‑associated TM helix domain‑containing protein |
| RA | 5,232,105 | C→G | 14.2% | P213P (CCG→CCC) | PP_4610 ← | PepSY‑associated TM helix domain‑containing protein |
| RA | 5,298,178 | C→A | 16.0% | A658S (GCC→TCC) | recD ← | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease |
| RA | 5,406,101 | C→G | 12.9% | A185A (GCG→GCC) | PP_4750 ← | amino acid ABC transporter permease |
| RA | 5,406,104 | C→G | 12.9% | A184A (GCG→GCC) | PP_4750 ← | amino acid ABC transporter permease |
| RA | 5,427,336 | T→A | 12.6% | D272V (GAC→GTC) | rhlE‑I ← | ATP‑dependent RNA helicase |
| RA | 5,427,343 | T→C | 10.9% | N270D (AAT→GAT) | rhlE‑I ← | ATP‑dependent RNA helicase |
| RA | 5,458,940:1 | +A | 17.2% | intergenic (+17/‑45) | leuS → / → PP_4795 | leucine‑‑tRNA ligase/lipoprotein |
| RA | 5,458,946 | Δ1 bp | 16.7% | intergenic (+23/‑39) | leuS → / → PP_4795 | leucine‑‑tRNA ligase/lipoprotein |
| RA | 5,550,087 | T→C | 14.3% | L94P (CTG→CCG) | PP_4881 → | iron ABC transporter substrate‑binding protein |
| RA | 5,557,779 | A→G | 11.5% | intergenic (‑99/+232) | PP_4888 ← / ← purA | methyl‑accepting chemotaxis transducer/adenylosuccinate synthetase |
| RA | 5,565,939 | A→T | 13.0% | I533N (ATT→AAT) | mutL ← | DNA mismatch repair protein MutL |
| RA | 5,609,045 | G→C | 15.2% | R202G (CGC→GGC) | waaA ← | 3‑deoxy‑D‑manno‑octulosonic acid transferase |
| RA | 5,609,048 | C→G | 14.3% | E201Q (GAG→CAG) | waaA ← | 3‑deoxy‑D‑manno‑octulosonic acid transferase |
| RA | 5,609,051 | G→C | 14.7% | P200A (CCT→GCT) | waaA ← | 3‑deoxy‑D‑manno‑octulosonic acid transferase |
| RA | 5,610,627 | G→A | 13.3% | intergenic (‑62/‑10) | PP_4929 ← / → emrE | LysR family transcriptional regulator/small multidrug resistance protein |
| RA | 5,631,134 | A→G | 10.5% | N205D (AAC→GAC) | putA → | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase |
| RA | 5,638,997 | A→T | 18.2% | H13L (CAC→CTC) | PP_4950 → | hypothetical protein |
| RA | 5,639,003 | C→G | 18.2% | A15G (GCC→GGC) | PP_4950 → | hypothetical protein |
| RA | 5,639,007 | T→G | 19.0% | L16L (CTT→CTG) | PP_4950 → | hypothetical protein |
| RA | 5,639,008 | C→A | 18.2% | Q17K (CAG→AAG) | PP_4950 → | hypothetical protein |
| RA | 5,639,013 | G→C | 18.2% | A18A (GCG→GCC) | PP_4950 → | hypothetical protein |
| RA | 5,639,018 | A→T | 18.2% | E20V (GAG→GTG) | PP_4950 → | hypothetical protein |
| RA | 5,643,352 | C→T | 15.6% | intergenic (+86/‑37) | dbpA → / → yhiN | 23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase |
| RA | 5,651,425 | T→G | 23.5% | intergenic (‑182/+31) | PP_4959 ← / ← fba | diguanylate cyclase/fructose‑bisphosphate aldolase |
| RA | 5,651,428 | C→A | 23.5% | intergenic (‑185/+28) | PP_4959 ← / ← fba | diguanylate cyclase/fructose‑bisphosphate aldolase |
| RA | 5,655,677:1 | +A | 26.1% | intergenic (‑81/+71) | epd ← / ← tktA | D‑erythrose 4‑phosphate dehydrogenase/transketolase A |
| RA | 5,655,682 | T→G | 28.6% | intergenic (‑86/+66) | epd ← / ← tktA | D‑erythrose 4‑phosphate dehydrogenase/transketolase A |
| RA | 5,655,687 | C→A | 26.2% | intergenic (‑91/+61) | epd ← / ← tktA | D‑erythrose 4‑phosphate dehydrogenase/transketolase A |
| RA | 5,655,692 | Δ1 bp | 20.0% | intergenic (‑96/+56) | epd ← / ← tktA | D‑erythrose 4‑phosphate dehydrogenase/transketolase A |
| RA | 5,734,098 | A→G | 11.4% | intergenic (‑68/+89) | proY ← / ← hutH | proline (histidine) APC transporter/histidine ammonia‑lyase |
| RA | 5,734,099 | C→T | 11.4% | intergenic (‑69/+88) | proY ← / ← hutH | proline (histidine) APC transporter/histidine ammonia‑lyase |
| RA | 5,743,446 | G→A | 11.7% | intergenic (‑223/+24) | fbp ← / ← glgP | class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase |
| RA | 5,743,460 | C→T | 10.6% | intergenic (‑237/+10) | fbp ← / ← glgP | class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase |
| RA | 5,777,373 | A→C | 16.7% | K545T (AAG→ACG) | betA‑II → | choline dehydrogenase |
| RA | 5,777,377 | C→G | 17.4% | Y546* (TAC→TAG) | betA‑II → | choline dehydrogenase |
| RA | 5,777,381 | G→T | 21.2% | V548L (GTG→TTG) | betA‑II → | choline dehydrogenase |
| RA | 5,813,272 | A→T | 18.1% | N46I (AAC→ATC) | argS → | arginine‑‑tRNA ligase |
| RA | 5,813,276 | C→G | 17.4% | I47M (ATC→ATG) | argS → | arginine‑‑tRNA ligase |
| RA | 5,813,279 | C→G | 17.4% | A48A (GCC→GCG) | argS → | arginine‑‑tRNA ligase |
| RA | 5,813,283 | A→T | 18.4% | M50L (ATG→TTG) | argS → | arginine‑‑tRNA ligase |
| RA | 5,827,810 | G→C | 14.8% | G223R (GGG→CGG) ‡ | mtgA → | monofunctional biosynthetic peptidoglycan transglycosylase |
| RA | 5,827,811 | G→C | 14.8% | G223A (GGG→GCG) ‡ | mtgA → | monofunctional biosynthetic peptidoglycan transglycosylase |
| RA | 5,827,820 | A→G | 15.1% | Y226C (TAC→TGC) | mtgA → | monofunctional biosynthetic peptidoglycan transglycosylase |
| RA | 5,851,227 | T→A | 14.7% | intergenic (+34/+34) | ilvD → / ← PP_5129 | dihydroxy‑acid dehydratase/hypothetical protein |
| RA | 5,872,077 | T→A | 22.3% | D211V (GAC→GTC) | ptsP ← | phosphoenolpyruvate‑dependent regulator |
| RA | 5,951,645 | T→C | 16.7% | Q456Q (CAA→CAG) | ppk ← | polyphosphate kinase |
| RA | 5,951,650 | G→A | 20.0% | L455L (CTG→TTG) | ppk ← | polyphosphate kinase |
| RA | 5,959,891 | G→A | 19.2% | A33V (GCC→GTC) | rnk ← | nucleotide diphosphokinase regulator |
| RA | 5,976,460 | C→A | 12.3% | L69I (CTC→ATC) | yifB → | ATP‑dependent chelatase |
| RA | 5,988,865 | G→A | 23.8% | intergenic (+103/‑443) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,875 | T→C | 22.6% | intergenic (+113/‑433) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,880 | C→T | 21.6% | intergenic (+118/‑428) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,881 | G→T | 21.3% | intergenic (+119/‑427) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,882 | C→T | 21.6% | intergenic (+120/‑426) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,885 | A→G | 19.9% | intergenic (+123/‑423) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,891 | G→C | 20.9% | intergenic (+129/‑417) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,893 | C→G | 21.1% | intergenic (+131/‑415) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,896 | C→T | 21.0% | intergenic (+134/‑412) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,900 | C→G | 21.6% | intergenic (+138/‑408) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,904 | C→T | 21.6% | intergenic (+142/‑404) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,906 | C→T | 21.0% | intergenic (+144/‑402) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,945 | C→A | 17.2% | intergenic (+183/‑363) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,997,245:1 | +G | 18.5% | intergenic (‑158/+42) | PP_5252 ← / ← PP_5253 | hypothetical protein/arylesterase |
| RA | 5,997,250 | Δ1 bp | 16.0% | intergenic (‑163/+37) | PP_5252 ← / ← PP_5253 | hypothetical protein/arylesterase |
| RA | 6,011,797 | C→T | 11.4% | P198L (CCC→CTC) | rep → | single‑stranded DNA dependent ATPase |
| RA | 6,011,800 | A→G | 11.1% | E199G (GAG→GGG) | rep → | single‑stranded DNA dependent ATPase |
| RA | 6,019,310 | T→A | 10.6% | intergenic (‑55/+90) | dadX ← / ← dadA‑II | alanine racemase/D‑amino acid:quinone oxidoreductase |
| RA | 6,019,311 | T→A | 10.6% | intergenic (‑56/+89) | dadX ← / ← dadA‑II | alanine racemase/D‑amino acid:quinone oxidoreductase |
| RA | 6,071,939 | C→G | 27.6% | L214F (TTG→TTC) | pstB‑II ← | phosphate ABC transporter ATP‑binding protein |
| MC JC | 6,098,315 | Δ9 bp | 100% | coding (822‑830/867 nt) | PP_5350 ← | RpiR family transcriptional regulator |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 171366–176295 | 176295 | 1–4930 | 6 [4] | [4] 5 | PP_16SA–[PP_5SA] | PP_16SA,PP_23SA,[PP_5SA] |
| * | * | ÷ | NC_002947 | 176640–181694 | 181694 | 1–5055 | 6 [4] | [4] 5 | PP_16SB–[PP_r01] | PP_16SB,PP_23SB,[PP_r01] |
| * | * | ÷ | NC_002947 | 1131670 | 1131799 | 130 | 5 [4] | [3] 5 | PP_0992 | hypothetical protein |
| * | * | ÷ | NC_002947 | 4808205 | 4808233 | 29 | 8 [0] | [4] 5 | PP_4234/dsbD‑II | bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 12249 | 35 (1.500) | 8 (0.360) | 6/240 | NT | 18.4% | coding (28/1104 nt) | recF | DNA replication/repair protein |
| ? | NC_002947 | = 12267 | 38 (1.730) | coding (46/1104 nt) | recF | DNA replication/repair protein | |||||
| * | ? | NC_002947 | = 25940 | 9 (0.390) | 4 (0.180) | 4/240 | NT | 31.4% | coding (60/924 nt) | PP_0021 | hypothetical protein |
| ? | NC_002947 | = 25952 | 9 (0.410) | coding (72/924 nt) | PP_0021 | hypothetical protein | |||||
| * | ? | NC_002947 | = 26802 | 11 (0.470) | 7 (0.320) | 5/240 | NT | 38.5% | coding (922/924 nt) | PP_0021 | hypothetical protein |
| ? | NC_002947 | = 26806 | 12 (0.550) | intergenic (+2/+183) | PP_0021/PP_0022 | hypothetical protein/hypothetical protein | |||||
| * | ? | NC_002947 | = 72619 | 16 (0.690) | 6 (0.270) | 6/242 | NT | 26.5% | coding (230/948 nt) | glyQ | glycine‑tRNA ligase subunit alpha |
| ? | NC_002947 | = 72634 | 18 (0.810) | coding (215/948 nt) | glyQ | glycine‑tRNA ligase subunit alpha | |||||
| * | ? | NC_002947 | = 174906 | NA (NA) | 4 (0.180) | 4/244 | NT | NA | noncoding (1704/2902 nt) | PP_23SA | 23S ribosomal RNA |
| ? | NC_002947 | = 174936 | NA (NA) | noncoding (1734/2902 nt) | PP_23SA | 23S ribosomal RNA | |||||
| * | ? | NC_002947 | 235331 = | 29 (1.240) | 5 (0.250) | 5/222 | NT | 17.4% | intergenic (+28/+97) | PP_0183/argH | glutathione S‑transferase/argininosuccinate lyase |
| ? | NC_002947 | 235390 = | 22 (1.080) | intergenic (+87/+38) | PP_0183/argH | glutathione S‑transferase/argininosuccinate lyase | |||||
| * | ? | NC_002947 | = 292192 | 35 (1.500) | 4 (0.180) | 4/238 | NT | 11.6% | coding (573/966 nt) | ssuA | aliphatic sulfonatesABC transporter substrate‑binding protein |
| ? | NC_002947 | = 292237 | 28 (1.280) | coding (618/966 nt) | ssuA | aliphatic sulfonatesABC transporter substrate‑binding protein | |||||
| * | ? | NC_002947 | = 302209 | 27 (1.160) | 6 (0.270) | 6/244 | NT | 17.2% | coding (373/1314 nt) | envZ | osmolarity sensor protein EnvZ |
| ? | NC_002947 | = 302222 | 32 (1.430) | coding (386/1314 nt) | envZ | osmolarity sensor protein EnvZ | |||||
| * | ? | NC_002947 | 322577 = | 19 (0.820) | 3 (0.130) | 3/244 | NT | 13.3% | coding (1666/2070 nt) | PP_0267 | ferric siderophore receptor |
| ? | NC_002947 | 322613 = | 21 (0.940) | coding (1630/2070 nt) | PP_0267 | ferric siderophore receptor | |||||
| * | ? | NC_002947 | = 328970 | 23 (0.990) | 3 (0.140) | 3/238 | NT | 12.1% | coding (282/1368 nt) | PP_0270 | sensor histidine kinase |
| ? | NC_002947 | = 328998 | 22 (1.010) | coding (254/1368 nt) | PP_0270 | sensor histidine kinase | |||||
| * | ? | NC_002947 | 359677 = | 37 (1.590) | 7 (0.320) | 7/240 | NT | 17.5% | intergenic (+34/+86) | gbdR/PP_0299 | AraC family transcriptional regulator/hypothetical protein |
| ? | NC_002947 | 359721 = | 31 (1.410) | intergenic (+78/+42) | gbdR/PP_0299 | AraC family transcriptional regulator/hypothetical protein | |||||
| * | ? | NC_002947 | = 379592 | 27 (1.160) | 3 (0.140) | 3/240 | NT | 10.4% | intergenic (‑175/‑115) | gbcA/gbcB | glycine‑betaine dioxygenase subunit/glycine‑betaine dioxygenase subunit |
| ? | NC_002947 | = 379602 | 26 (1.180) | intergenic (‑185/‑105) | gbcA/gbcB | glycine‑betaine dioxygenase subunit/glycine‑betaine dioxygenase subunit | |||||
| * | ? | NC_002947 | 617041 = | 13 (0.560) | 4 (0.180) | 3/246 | NT | 21.9% | coding (366/981 nt) | PP_0531 | hypothetical protein |
| ? | NC_002947 | 617114 = | 16 (0.710) | coding (439/981 nt) | PP_0531 | hypothetical protein | |||||
| * | ? | NC_002947 | = 652785 | 15 (0.640) | 6 (0.310) | 6/214 | NT | 48.7% | coding (1961/1962 nt) | ctpL | methyl‑accepting chemotaxis protein CtpL |
| ? | NC_002947 | = 4808204 | 0 (0.000) | intergenic (‑268/‑287) | PP_4234/dsbD‑II | bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2 | |||||
| * | ? | NC_002947 | 713464 = | 19 (0.820) | 3 (0.140) | 3/238 | NT | 18.3% | coding (450/531 nt) | lspA | lipoprotein signal peptidase |
| ? | NC_002947 | 713501 = | 9 (0.410) | coding (487/531 nt) | lspA | lipoprotein signal peptidase | |||||
| * | ? | NC_002947 | = 734332 | 23 (0.990) | 4 (0.190) | 4/232 | NT | 15.7% | coding (988/1296 nt) | ndh | NADH dehydrogenase |
| ? | NC_002947 | = 734372 | 22 (1.030) | coding (948/1296 nt) | ndh | NADH dehydrogenase | |||||
| * | ? | NC_002947 | = 743469 | 34 (1.460) | 6 (0.300) +AGGCAGGTCTGATTTCGC |
8/218 | NT | 21.5% | intergenic (+145/+129) | PP_0635/PP_0636 | group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein |
| ? | NC_002947 | = 1431465 | 17 (0.730) | intergenic (+74/+78) | PP_1252/PP_1253 | group II intron‑encoding maturase/ArsR family transcriptional regulator | |||||
| * | ? | NC_002947 | 745350 = | NA (NA) | 3 (0.140) | 3/236 | NT | NA | coding (1152/1533 nt) | PP_0637 | transposase |
| ? | NC_002947 | 745416 = | NA (NA) | coding (1086/1533 nt) | PP_0637 | transposase | |||||
| * | ? | NC_002947 | 850979 = | 12 (0.510) | 4 (0.180) | 4/246 | NT | 19.2% | intergenic (‑559/‑246) | pcs/hemA | phosphatidylcholine synthase/glutamyl‑tRNA reductase |
| ? | NC_002947 | = 4908110 | 22 (0.970) | intergenic (‑41/‑241) | PP_4317/PP_4318 | hypothetical protein/transposase | |||||
| * | ? | NC_002947 | 1002378 = | 38 (1.630) | 3 (0.130) | 3/244 | NT | 8.8% | coding (612/1164 nt) | speC | ornithine decarboxylase |
| ? | NC_002947 | 1002468 = | 26 (1.160) | coding (522/1164 nt) | speC | ornithine decarboxylase | |||||
| * | ? | NC_002947 | = 1037796 | 13 (0.560) | 5 (0.260) | 5/208 | NT | 28.1% | intergenic (+38/+78) | PP_0896/PP_0897 | carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase |
| ? | NC_002947 | = 1037828 | 15 (0.790) | intergenic (+70/+46) | PP_0896/PP_0897 | carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase | |||||
| * | ? | NC_002947 | 1156328 = | 17 (0.730) | 7 (0.370) | 6/204 | NT | 35.3% | intergenic (+25/‑191) | PP_1013/yihS | sensor histidine kinase/aldose‑ketose isomerase |
| ? | NC_002947 | 1156401 = | 12 (0.640) | intergenic (+98/‑118) | PP_1013/yihS | sensor histidine kinase/aldose‑ketose isomerase | |||||
| * | ? | NC_002947 | = 1297145 | NA (NA) | 8 (0.360) | 6/242 | NT | NA | coding (327/1329 nt) | PP_1133 | transposase |
| ? | NC_002947 | = 1297150 | NA (NA) | coding (332/1329 nt) | PP_1133 | transposase | |||||
| * | ? | NC_002947 | = 1322188 | 24 (1.030) | 4 (0.170) | 4/252 | NT | 13.6% | coding (549/2586 nt) | PP_1154 | sensory box protein |
| ? | NC_002947 | = 1322224 | 27 (1.170) | coding (513/2586 nt) | PP_1154 | sensory box protein | |||||
| * | ? | NC_002947 | = 1426821 | NA (NA) | 6 (0.270) | 3/244 | NT | NA | coding (712/1422 nt) | PP_1250 | group II intron‑encoding maturase |
| ? | NC_002947 | = 1426852 | NA (NA) | coding (743/1422 nt) | PP_1250 | group II intron‑encoding maturase | |||||
| * | ? | NC_002947 | = 1436023 | 19 (0.820) | 8 (0.360) | 8/242 | NT | 30.7% | intergenic (‑53/+100) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase |
| ? | NC_002947 | = 1436102 | 18 (0.810) | intergenic (‑132/+21) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase | |||||
| * | ? | NC_002947 | 1573491 = | 26 (1.120) | 4 (0.180) | 4/242 | NT | 13.2% | coding (207/792 nt) | pcaD | 3‑oxoadipate enol‑lactonase |
| ? | NC_002947 | 1573532 = | 28 (1.260) | coding (248/792 nt) | pcaD | 3‑oxoadipate enol‑lactonase | |||||
| * | ? | NC_002947 | = 1586680 | 18 (0.770) | 3 (0.130) | 3/244 | NT | 15.3% | coding (768/909 nt) | PP_1391 | LysR family transcriptional regulator |
| ? | NC_002947 | = 1586719 | 16 (0.710) | coding (729/909 nt) | PP_1391 | LysR family transcriptional regulator | |||||
| * | ? | NC_002947 | = 1731203 | 15 (0.640) | 8 (0.350) | 4/252 | NT | 34.1% | intergenic (‑74/+117) | dapE/PP_1526 | succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase |
| ? | NC_002947 | = 1731297 | 16 (0.690) | intergenic (‑168/+23) | dapE/PP_1526 | succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase | |||||
| * | ? | NC_002947 | 1731205 = | 15 (0.640) | 4 (0.220) | 4/198 | NT | 21.8% | intergenic (‑76/+115) | dapE/PP_1526 | succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase |
| ? | NC_002947 | 1731297 = | 17 (0.940) | intergenic (‑168/+23) | dapE/PP_1526 | succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase | |||||
| * | ? | NC_002947 | = 1811455 | 21 (0.900) | 3 (0.140) | 3/240 | NT | 12.5% | intergenic (+20/+108) | ispD/PP_1615 | 2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase/LysR family transcriptional regulator |
| ? | NC_002947 | = 1811537 | 22 (1.000) | intergenic (+102/+26) | ispD/PP_1615 | 2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase/LysR family transcriptional regulator | |||||
| * | ? | NC_002947 | = 1842441 | 18 (0.770) | 4 (0.180) | 4/240 | NT | 18.6% | coding (2395/2754 nt) | gacS | sensor protein GacS |
| ? | NC_002947 | = 1842465 | 18 (0.820) | coding (2371/2754 nt) | gacS | sensor protein GacS | |||||
| * | ? | NC_002947 | 1844176 = | 1 (0.040) | 20 (0.890) | 20/244 | NT | 75.5% | coding (660/2754 nt) | gacS | sensor protein GacS |
| ? | NC_002947 | = 2179419 | 12 (0.540) | intergenic (+175/+93) | PP_1931/PP_5486 | hypothetical protein/hypothetical protein | |||||
| * | ? | NC_002947 | = 1844179 | 1 (0.040) | 26 (1.150) | 26/246 | NT | 77.6% | coding (657/2754 nt) | gacS | sensor protein GacS |
| ? | NC_002947 | 2177745 = | 14 (0.620) | intergenic (+103/‑63) | PP_5485/PP_1931 | GNAT family acetyltransferase/hypothetical protein | |||||
| * | ? | NC_002947 | 1896917 = | 27 (1.160) | 4 (0.180) | 4/242 | NT | 14.4% | coding (199/318 nt) | sugE | transporter |
| ? | NC_002947 | 1896946 = | 22 (0.990) | coding (170/318 nt) | sugE | transporter | |||||
| * | ? | NC_002947 | 1917264 = | 29 (1.240) | 5 (0.240) | 5/232 | NT | 15.3% | coding (1003/1083 nt) | PP_1718 | EAL domain‑containing diguanylate phosphodiesterase |
| ? | NC_002947 | 1917343 = | 29 (1.360) | coding (924/1083 nt) | PP_1718 | EAL domain‑containing diguanylate phosphodiesterase | |||||
| * | ? | NC_002947 | = 1970782 | 32 (1.370) | 6 (0.310) | 5/214 | NT | 19.1% | intergenic (+33/‑233) | mtnA/PP_mr25 | methylthioribose‑1‑phosphate isomerase/gyrA regulatory region |
| ? | NC_002947 | = 1970844 | 24 (1.220) | intergenic (+95/‑171) | mtnA/PP_mr25 | methylthioribose‑1‑phosphate isomerase/gyrA regulatory region | |||||
| * | ? | NC_002947 | 2048837 = | 29 (1.240) | 4 (0.200) | 4/220 | NT | 17.0% | intergenic (+33/+106) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein |
| ? | NC_002947 | 2048928 = | 14 (0.690) | intergenic (+124/+15) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein | |||||
| * | ? | NC_002947 | 2050602 = | 2 (0.090) | 3 (0.180) | 3/180 | NT | 44.7% | intergenic (‑52/+123) | PP_1824/PP_1825 | Smr domain‑containing protein/hypothetical protein |
| ? | NC_002947 | 2050712 = | 6 (0.360) | intergenic (‑162/+13) | PP_1824/PP_1825 | Smr domain‑containing protein/hypothetical protein | |||||
| * | ? | NC_002947 | = 2050638 | 2 (0.090) | 4 (0.240) | 4/180 | NT | 51.9% | intergenic (‑88/+87) | PP_1824/PP_1825 | Smr domain‑containing protein/hypothetical protein |
| ? | NC_002947 | = 2050674 | 6 (0.360) | intergenic (‑124/+51) | PP_1824/PP_1825 | Smr domain‑containing protein/hypothetical protein | |||||
| * | ? | NC_002947 | = 2056021 | 19 (0.820) | 3 (0.150) | 3/222 | NT | 14.8% | intergenic (+27/‑116) | aroC/PP_1831 | chorismate synthase/membrane protein |
| ? | NC_002947 | = 2056095 | 18 (0.880) | intergenic (+101/‑42) | aroC/PP_1831 | chorismate synthase/membrane protein | |||||
| * | ? | NC_002947 | = 2057866 | 23 (0.990) | 5 (0.260) | 4/206 | NT | 16.0% | intergenic (+39/+89) | PP_1832/PP_1833 | oxidase/hypothetical protein |
| ? | NC_002947 | = 2057906 | 34 (1.800) | intergenic (+79/+49) | PP_1832/PP_1833 | oxidase/hypothetical protein | |||||
| * | ? | NC_002947 | 2059626 = | 15 (0.640) | 3 (0.140) | 3/236 | NT | 19.4% | intergenic (+17/+107) | PP_1835/PP_1836 | hypothetical protein/ZIP family metal transporter |
| ? | NC_002947 | 2059707 = | 11 (0.510) | intergenic (+98/+26) | PP_1835/PP_1836 | hypothetical protein/ZIP family metal transporter | |||||
| * | ? | NC_002947 | = 2078299 | 24 (1.030) | 3 (0.150) | 3/220 | NT | 13.4% | intergenic (+41/+74) | PP_1853/PP_1854 | LysR family transcriptional regulator/hypothetical protein |
| ? | NC_002947 | = 2078346 | 18 (0.890) | intergenic (+88/+27) | PP_1853/PP_1854 | LysR family transcriptional regulator/hypothetical protein | |||||
| * | ? | NC_002947 | 2274124 = | 29 (1.240) | 5 (0.230) | 4/238 | NT | 16.6% | coding (286/1041 nt) | PP_2004 | AraC family transcriptional regulator |
| ? | NC_002947 | 2274156 = | 23 (1.050) | coding (254/1041 nt) | PP_2004 | AraC family transcriptional regulator | |||||
| * | ? | NC_002947 | 2279206 = | 11 (0.470) | 5 (0.230) | 4/240 | NT | 29.1% | coding (303/2082 nt) | fadH | 2,4‑dienoyl‑CoA reductase |
| ? | NC_002947 | 2279232 = | 14 (0.640) | coding (329/2082 nt) | fadH | 2,4‑dienoyl‑CoA reductase | |||||
| * | ? | NC_002947 | 2295818 = | 26 (1.120) | 4 (0.210) | 4/206 | NT | 17.8% | intergenic (+21/+112) | PP_5496/PP_2023 | hypothetical protein/glutathione S‑transferase family protein |
| ? | NC_002947 | 2295903 = | 16 (0.850) | intergenic (+106/+27) | PP_5496/PP_2023 | hypothetical protein/glutathione S‑transferase family protein | |||||
| * | ? | NC_002947 | 2301803 = | 33 (1.420) | 3 (0.140) | 4/238 | NT | 9.9% | coding (74/654 nt) | PP_5497 | rhs repeat‑associated core domain‑containing protein |
| ? | NC_002947 | 2301828 = | 24 (1.100) | coding (99/654 nt) | PP_5497 | rhs repeat‑associated core domain‑containing protein | |||||
| * | ? | NC_002947 | 2357093 = | 15 (0.640) | 4 (0.190) | 4/234 | NT | 20.1% | coding (328/387 nt) | PP_2071 | hypothetical protein |
| ? | NC_002947 | 2357165 = | 18 (0.840) | coding (256/387 nt) | PP_2071 | hypothetical protein | |||||
| * | ? | NC_002947 | 2581091 = | 26 (1.120) | 4 (0.180) | 4/238 | NT | 13.9% | coding (270/867 nt) | PP_2262 | sugar ABC transporter permease |
| ? | NC_002947 | 2581119 = | 25 (1.150) | coding (298/867 nt) | PP_2262 | sugar ABC transporter permease | |||||
| * | ? | NC_002947 | 2653644 = | 19 (0.820) | 4 (0.200) | 4/222 | NT | 19.7% | intergenic (+40/‑85) | PP_2325/PP_2326 | 2‑dehydropantoate 2‑reductase/universal stress protein |
| ? | NC_002947 | 2653686 = | 16 (0.790) | intergenic (+82/‑43) | PP_2325/PP_2326 | 2‑dehydropantoate 2‑reductase/universal stress protein | |||||
| * | ? | NC_002947 | 2664051 = | 19 (0.820) | 5 (0.260) | 4/206 | NT | 24.8% | intergenic (+33/‑130) | prpC/acnA‑II | methylcitrate synthase/aconitate hydratase |
| ? | NC_002947 | 2664132 = | 15 (0.790) | intergenic (+114/‑49) | prpC/acnA‑II | methylcitrate synthase/aconitate hydratase | |||||
| * | ? | NC_002947 | = 2676814 | 23 (0.990) | 5 (0.230) | 5/238 | NT | 19.0% | coding (92/315 nt) | PP_2346 | hypothetical protein |
| ? | NC_002947 | = 2676840 | 21 (0.960) | coding (118/315 nt) | PP_2346 | hypothetical protein | |||||
| * | ? | NC_002947 | 2942765 = | 18 (0.770) | 3 (0.130) | 3/244 | NT | 13.5% | intergenic (‑523/‑850) | PP_2575/PP_2577 | hypothetical protein/paraquat‑inducible protein B |
| ? | NC_002947 | 2942805 = | 21 (0.940) | intergenic (‑563/‑810) | PP_2575/PP_2577 | hypothetical protein/paraquat‑inducible protein B | |||||
| * | ? | NC_002947 | 2960543 = | 24 (1.030) | 4 (0.170) | 4/250 | NT | 14.9% | coding (692/2316 nt) | PP_2590 | ferric siderophore receptor |
| ? | NC_002947 | 2960572 = | 22 (0.960) | coding (663/2316 nt) | PP_2590 | ferric siderophore receptor | |||||
| * | ? | NC_002947 | = 3135354 | 27 (1.160) | 6 (0.280) | 6/236 | NT | 18.2% | intergenic (+23/‑37) | PP_2751/PP_2752 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 3135365 | 29 (1.340) | intergenic (+34/‑26) | PP_2751/PP_2752 | hypothetical protein/hypothetical protein | |||||
| * | ? | NC_002947 | = 3382182 | 18 (0.770) | 4 (0.180) | 4/244 | NT | 22.0% | coding (148/480 nt) | PP_2984 | hypothetical protein |
| ? | NC_002947 | = 3382219 | 11 (0.490) | coding (185/480 nt) | PP_2984 | hypothetical protein | |||||
| * | ? | NC_002947 | = 3464323 | 23 (0.990) | 4 (0.210) | 4/206 | NT | 15.5% | coding (78/1929 nt) | PP_3078 | ABC transporter substrate‑binding protein |
| ? | NC_002947 | = 3464362 | 25 (1.320) | coding (39/1929 nt) | PP_3078 | ABC transporter substrate‑binding protein | |||||
| * | ? | NC_002947 | 3522745 = | 19 (0.820) | 8 (0.390) | 4/224 | NT | 29.8% | intergenic (+489/‑208) | PP_5584/PP_3113 | hypothetical protein/transposase |
| ? | NC_002947 | 3522832 = | 21 (1.020) | intergenic (+576/‑121) | PP_5584/PP_3113 | hypothetical protein/transposase | |||||
| * | ? | NC_002947 | 3523928 = | NA (NA) | 4 (0.180) | 4/246 | NT | NA | coding (598/1533 nt) | PP_3114 | transposase |
| ? | NC_002947 | 3523974 = | NA (NA) | coding (644/1533 nt) | PP_3114 | transposase | |||||
| * | ? | NC_002947 | = 3581719 | 17 (0.730) | 3 (0.140) | 3/236 | NT | 15.5% | coding (772/942 nt) | PP_3160 | hypothetical protein |
| ? | NC_002947 | = 3581735 | 17 (0.790) | coding (788/942 nt) | PP_3160 | hypothetical protein | |||||
| * | ? | NC_002947 | = 3588138 | 17 (0.730) | 5 (0.220) | 5/244 | NT | 22.1% | intergenic (+16/‑59) | catA‑II/benE‑II | catechol 1,2‑dioxygenase/benzoate transport protein |
| ? | NC_002947 | = 3588208 | 19 (0.850) | coding (12/1272 nt) | benE‑II | benzoate transport protein | |||||
| * | ? | NC_002947 | 3622255 = | 36 (1.540) | 4 (0.190) | 4/230 | NT | 11.3% | intergenic (‑175/+51) | PP_3192/PP_3193 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 3622301 = | 30 (1.420) | intergenic (‑221/+5) | PP_3192/PP_3193 | hypothetical protein/hypothetical protein | |||||
| * | ? | NC_002947 | = 3655118 | 23 (0.990) | 4 (0.180) | 4/246 | NT | 14.7% | coding (1318/1620 nt) | PP_3220 | ABC transporter ATP‑binding protein |
| ? | NC_002947 | = 3655151 | 24 (1.060) | coding (1285/1620 nt) | PP_3220 | ABC transporter ATP‑binding protein | |||||
| * | ? | NC_002947 | = 3846594 | 28 (1.200) | 4 (0.180) | 4/248 | NT | 11.5% | coding (147/966 nt) | PP_3395 | LysR family transcriptional regulator |
| ? | NC_002947 | = 3846629 | 34 (1.490) | coding (112/966 nt) | PP_3395 | LysR family transcriptional regulator | |||||
| * | ? | NC_002947 | = 3863902 | 19 (0.820) | 3 (0.130) | 3/248 | NT | 12.4% | coding (2781/3282 nt) | PP_3413 | two‑component system sensor histidine kinase/response regulator |
| ? | NC_002947 | = 3863963 | 24 (1.050) | coding (2842/3282 nt) | PP_3413 | two‑component system sensor histidine kinase/response regulator | |||||
| * | ? | NC_002947 | 4065632 = | 27 (1.160) | 3 (0.130) | 3/246 | NT | 10.5% | coding (372/1491 nt) | PP_3582 | RND transporter outer membrane protein |
| ? | NC_002947 | 4065689 = | 25 (1.110) | coding (315/1491 nt) | PP_3582 | RND transporter outer membrane protein | |||||
| * | ? | NC_002947 | 4067814 = | 26 (1.120) | 3 (0.130) | 3/244 | NT | 10.0% | coding (1294/3108 nt) | mdtC | multidrug transporter membrane protein |
| ? | NC_002947 | 4067854 = | 29 (1.300) | coding (1254/3108 nt) | mdtC | multidrug transporter membrane protein | |||||
| * | ? | NC_002947 | 4110307 = | 29 (1.240) | 4 (0.180) | 4/244 | NT | 14.9% | coding (2085/2991 nt) | PP_3616 | membrane protein |
| ? | NC_002947 | 4110336 = | 18 (0.800) | coding (2114/2991 nt) | PP_3616 | membrane protein | |||||
| * | ? | NC_002947 | = 4131170 | 25 (1.070) | 8 (0.370) | 6/238 | NT | 25.2% | intergenic (+38/+74) | PP_3634/PP_3635 | GNAT family acetyltransferase/sulfonate ABC transporter permease |
| ? | NC_002947 | = 4131200 | 24 (1.100) | intergenic (+68/+44) | PP_3634/PP_3635 | GNAT family acetyltransferase/sulfonate ABC transporter permease | |||||
| * | ? | NC_002947 | = 4163289 | 26 (1.120) | 4 (0.180) | 4/240 | NT | 14.1% | coding (217/1329 nt) | pssA | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase |
| ? | NC_002947 | = 4163304 | 24 (1.090) | coding (202/1329 nt) | pssA | CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase | |||||
| * | ? | NC_002947 | = 4218259 | 11 (0.470) | 3 (0.140) | 3/238 | NT | 23.7% | coding (1082/1500 nt) | PP_3698 | hypothetical protein |
| ? | NC_002947 | = 4218300 | 9 (0.410) | coding (1041/1500 nt) | PP_3698 | hypothetical protein | |||||
| * | ? | NC_002947 | = 4477202 | 15 (0.640) | 4 (0.180) | 4/244 | NT | 23.9% | coding (834/1119 nt) | PP_3968 | sensor histidine kinase |
| ? | NC_002947 | = 4477239 | 11 (0.490) | coding (797/1119 nt) | PP_3968 | sensor histidine kinase | |||||
| * | ? | NC_002947 | = 4483008 | 24 (1.030) | 3 (0.140) | 3/242 | NT | 11.4% | coding (970/987 nt) | PP_3974 | LysR family transcriptional regulator |
| ? | NC_002947 | = 4483013 | 24 (1.080) | coding (975/987 nt) | PP_3974 | LysR family transcriptional regulator | |||||
| * | ? | NC_002947 | = 4504189 | 29 (1.240) | 4 (0.180) | 4/244 | NT | 14.3% | coding (297/393 nt) | tusD | sulfur transfer protein complex subunit TusD |
| ? | NC_002947 | = 4504239 | 20 (0.890) | coding (347/393 nt) | tusD | sulfur transfer protein complex subunit TusD | |||||
| * | ? | NC_002947 | = 4572333 | 25 (1.070) | 6 (0.270) | 5/242 | NT | 19.7% | coding (2153/2775 nt) | treY | maltooligosyl trehalose synthase |
| ? | NC_002947 | = 4572365 | 25 (1.130) | coding (2185/2775 nt) | treY | maltooligosyl trehalose synthase | |||||
| * | ? | NC_002947 | 4580793 = | 32 (1.370) | 3 (0.130) | 3/244 | NT | 8.5% | coding (2679/3321 nt) | treSB | bifunctional trehalose synthase B/maltokinase |
| ? | NC_002947 | 4580833 = | 34 (1.520) | coding (2639/3321 nt) | treSB | bifunctional trehalose synthase B/maltokinase | |||||
| * | ? | NC_002947 | = 4586100 | 9 (0.390) | 9 (0.550) | 8/178 | NT | 44.7% | intergenic (+139/+78) | PP_4061/PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase |
| ? | NC_002947 | = 4586128 | 16 (0.980) | intergenic (+167/+50) | PP_4061/PP_4063 | hypothetical protein/long‑chain fatty acid‑‑CoA ligase | |||||
| * | ? | NC_002947 | 4609894 = | 28 (1.200) | 4 (0.190) | 3/234 | NT | 14.1% | coding (335/876 nt) | PP_4081 | type IV/VI secretion system protein |
| ? | NC_002947 | 4609934 = | 23 (1.070) | coding (375/876 nt) | PP_4081 | type IV/VI secretion system protein | |||||
| * | ? | NC_002947 | = 4647641 | 6 (0.260) | 5 (0.310) | 4/176 | NT | 45.2% | intergenic (+48/+83) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
| ? | NC_002947 | = 4647671 | 8 (0.500) | intergenic (+78/+53) | fusB/PP_4112 | elongation factor G 2/sulfate transporter | |||||
| * | ? | NC_002947 | = 4861197 | 29 (1.240) | 6 (0.320) | 6/204 | NT | 22.1% | intergenic (‑103/+134) | ligA/PP_4275 | DNA ligase/cell division protein ZipA |
| ? | NC_002947 | = 4861238 | 19 (1.020) | intergenic (‑144/+93) | ligA/PP_4275 | DNA ligase/cell division protein ZipA | |||||
| * | ? | NC_002947 | = 4889640 | 22 (0.940) | 4 (0.220) | 4/200 | NT | 16.6% | intergenic (+41/‑112) | hyi/glxR | hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase |
| ? | NC_002947 | = 4889677 | 23 (1.260) | intergenic (+78/‑75) | hyi/glxR | hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase | |||||
| * | ? | NC_002947 | 4893598 = | 27 (1.160) | 3 (0.160) | 3/200 | NT | 12.2% | intergenic (+28/‑180) | pyk/PP_4302 | pyruvate kinase/urea transporter |
| ? | NC_002947 | 4893677 = | 22 (1.200) | intergenic (+107/‑101) | pyk/PP_4302 | pyruvate kinase/urea transporter | |||||
| * | ? | NC_002947 | = 4893624 | 29 (1.240) | 3 (0.160) | 3/200 | NT | 11.8% | intergenic (+54/‑154) | pyk/PP_4302 | pyruvate kinase/urea transporter |
| ? | NC_002947 | = 4893649 | 22 (1.200) | intergenic (+79/‑129) | pyk/PP_4302 | pyruvate kinase/urea transporter | |||||
| * | ? | NC_002947 | 5118306 = | 30 (1.290) | 4 (0.180) | 4/240 | NT | 12.2% | coding (32/1341 nt) | PP_4505 | sensor histidine kinase |
| ? | NC_002947 | 5118327 = | 29 (1.320) | coding (53/1341 nt) | PP_4505 | sensor histidine kinase | |||||
| * | ? | NC_002947 | 5165972 = | 20 (0.860) | 3 (0.140) | 3/240 | NT | 14.0% | coding (1956/3906 nt) | hrpA | ATP‑dependent helicase HrpA |
| ? | NC_002947 | 5166024 = | 18 (0.820) | coding (1904/3906 nt) | hrpA | ATP‑dependent helicase HrpA | |||||
| * | ? | NC_002947 | 5196431 = | 38 (1.630) | 5 (0.230) | 5/234 | NT | 12.8% | coding (132/690 nt) | ybgJ | allophanate hydrolase subunit 1 |
| ? | NC_002947 | 5196476 = | 33 (1.540) | coding (87/690 nt) | ybgJ | allophanate hydrolase subunit 1 | |||||
| * | ? | NC_002947 | = 5246988 | 19 (0.820) | 4 (0.190) | 4/234 | NT | 17.6% | coding (1721/3303 nt) | PP_4623 | hypothetical protein |
| ? | NC_002947 | = 5247071 | 20 (0.930) | coding (1638/3303 nt) | PP_4623 | hypothetical protein | |||||
| * | ? | NC_002947 | 5280943 = | 24 (1.030) | 4 (0.210) | 3/204 | NT | 19.9% | intergenic (+28/+110) | trmA/pcaG | tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA/protocatechuate 3,4‑dioxygenase subunit alpha |
| ? | NC_002947 | 5281029 = | 13 (0.700) | intergenic (+114/+24) | trmA/pcaG | tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA/protocatechuate 3,4‑dioxygenase subunit alpha | |||||
| * | ? | NC_002947 | 5447841 = | 38 (1.630) | 3 (0.140) | 3/230 | NT | 7.9% | intergenic (+14/‑231) | hemL/PP_4785 | glutamate‑1‑semialdehyde 2,1‑aminomutase/hypothetical protein |
| ? | NC_002947 | 5447926 = | 36 (1.710) | intergenic (+99/‑146) | hemL/PP_4785 | glutamate‑1‑semialdehyde 2,1‑aminomutase/hypothetical protein | |||||
| * | ? | NC_002947 | = 5512843 | 27 (1.160) | 4 (0.180) | 4/242 | NT | 13.2% | coding (431/858 nt) | urtD | ABC transporter ATP‑binding protein |
| ? | NC_002947 | = 5512868 | 27 (1.220) | coding (456/858 nt) | urtD | ABC transporter ATP‑binding protein | |||||
| * | ? | NC_002947 | = 5537105 | 31 (1.330) | 10 (0.550) | 8/200 | NT | 25.9% | intergenic (+34/+69) | nadE/PP_4870 | NH(3)‑dependent NAD(+) synthetase/azurin |
| ? | NC_002947 | = 5537127 | 33 (1.800) | intergenic (+56/+47) | nadE/PP_4870 | NH(3)‑dependent NAD(+) synthetase/azurin | |||||
| * | ? | NC_002947 | = 5561207 | 30 (1.290) | 4 (0.180) | 4/242 | NT | 10.9% | coding (512/870 nt) | hflC | integral membrane ATP‑dependent zinc metallopeptidase |
| ? | NC_002947 | = 5561224 | 37 (1.670) | coding (495/870 nt) | hflC | integral membrane ATP‑dependent zinc metallopeptidase | |||||
| * | ? | NC_002947 | 5594143 = | 25 (1.070) | 3 (0.170) | 3/198 | NT | 14.1% | intergenic (‑39/+106) | PP_4921/thiC | NCS1 family transporter/phosphomethylpyrimidine synthase |
| ? | NC_002947 | 5594236 = | 17 (0.940) | intergenic (‑132/+13) | PP_4921/thiC | NCS1 family transporter/phosphomethylpyrimidine synthase | |||||
| * | ? | NC_002947 | = 5638996 | 17 (0.730) | 4 (0.180) | 4/248 | NT | 19.7% | coding (37/1320 nt) | PP_4950 | hypothetical protein |
| ? | NC_002947 | = 5639018 | 16 (0.700) | coding (59/1320 nt) | PP_4950 | hypothetical protein | |||||
| * | ? | NC_002947 | 5743392 = | 26 (1.120) | 8 (0.380) | 8/228 | NT | 24.9% | intergenic (‑169/+78) | fbp/glgP | class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase |
| ? | NC_002947 | 5743446 = | 25 (1.200) | intergenic (‑223/+24) | fbp/glgP | class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase | |||||
| * | ? | NC_002947 | = 5816898 | 26 (1.120) | 6 (0.270) | 5/244 | NT | 18.8% | intergenic (+28/+101) | PP_5092/pilT | NLP/P60 protein/twitching motility protein |
| ? | NC_002947 | = 5816983 | 27 (1.210) | intergenic (+113/+16) | PP_5092/pilT | NLP/P60 protein/twitching motility protein | |||||
| * | ? | NC_002947 | = 5856874 | 28 (1.200) | 3 (0.130) | 3/244 | NT | 10.4% | coding (745/1392 nt) | PP_5133 | membrane protein |
| ? | NC_002947 | = 5856913 | 25 (1.120) | coding (784/1392 nt) | PP_5133 | membrane protein | |||||
| * | ? | NC_002947 | = 5903842 | 26 (1.120) | 4 (0.200) | 3/222 | NT | 13.0% | intergenic (+42/+65) | PP_5176/spuH | hypothetical protein/spermidine/putrescine ABC transporter permease |
| ? | NC_002947 | = 5903870 | 31 (1.520) | intergenic (+70/+37) | PP_5176/spuH | hypothetical protein/spermidine/putrescine ABC transporter permease | |||||
| * | ? | NC_002947 | 5911055 = | 23 (0.990) | 4 (0.180) | 4/246 | NT | 15.0% | coding (1159/1359 nt) | spuB | glutamylpolyamine synthetase |
| ? | NC_002947 | 5911078 = | 23 (1.020) | coding (1136/1359 nt) | spuB | glutamylpolyamine synthetase | |||||
| * | ? | NC_002947 | 5914213 = | 19 (0.820) | 7 (0.390) | 7/198 | NT | 31.3% | intergenic (+49/+104) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| ? | NC_002947 | 5914309 = | 16 (0.880) | intergenic (+145/+8) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase | |||||
| * | ? | NC_002947 | = 5914240 | 20 (0.860) | 6 (0.330) | 3/198 | NT | 27.6% | intergenic (+76/+77) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| ? | NC_002947 | = 5914280 | 16 (0.880) | intergenic (+116/+37) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase | |||||
| * | ? | NC_002947 | 5918382 = | 27 (1.160) | 5 (0.250) | 4/220 | NT | 19.5% | intergenic (+16/+79) | ygiF/PP_5188 | thiamine triphosphatase/AsnC/Lrp family transcriptional regulator |
| ? | NC_002947 | 5918456 = | 18 (0.890) | intergenic (+90/+5) | ygiF/PP_5188 | thiamine triphosphatase/AsnC/Lrp family transcriptional regulator | |||||
| * | ? | NC_002947 | 6000959 = | 24 (1.030) | 4 (0.230) | 4/194 | NT | 20.4% | intergenic (+10/+99) | PP_5256/amaA | cyclic nucleotide‑binding protein/L‑pipecolate oxidase |
| ? | NC_002947 | 6001053 = | 13 (0.730) | intergenic (+104/+5) | PP_5256/amaA | cyclic nucleotide‑binding protein/L‑pipecolate oxidase | |||||
| * | ? | NC_002947 | 6006595 = | 12 (0.510) | 7 (0.420) | 7/182 | NT | 59.4% | intergenic (+7/+92) | ydcJ/PP_5261 | metalloprotein/LysR family transcriptional regulator |
| ? | NC_002947 | 6006679 = | 1 (0.060) | intergenic (+91/+8) | ydcJ/PP_5261 | metalloprotein/LysR family transcriptional regulator | |||||
| * | ? | NC_002947 | = 6060500 | 29 (1.240) | 6 (0.290) | 6/226 | NT | 20.4% | intergenic (+80/+101) | PP_5311/PP_5312 | signal transduction protein/hypothetical protein |
| ? | NC_002947 | = 6060559 | 21 (1.010) | intergenic (+139/+42) | PP_5311/PP_5312 | signal transduction protein/hypothetical protein | |||||
| * | ? | NC_002947 | = 6062179 | 25 (1.070) | 4 (0.180) | 4/248 | NT | 15.3% | coding (581/1149 nt) | alkT | rubredoxin‑NAD(+) reductase |
| ? | NC_002947 | = 6062220 | 20 (0.880) | coding (540/1149 nt) | alkT | rubredoxin‑NAD(+) reductase | |||||
| * | ? | NC_002947 | 6121904 = | 29 (1.240) | 5 (0.230) | 5/242 | NT | 16.0% | coding (302/1386 nt) | PP_5371 | rubredoxin/rubredoxin reductase |
| ? | NC_002947 | 6121950 = | 25 (1.130) | coding (256/1386 nt) | PP_5371 | rubredoxin/rubredoxin reductase | |||||