breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	4,977	C→T	5.5%	intergenic (‑596/+35)	trmF ← / ← trmE	tRNA uridine 5‑carboxymethylaminomethyl modification protein/GTPase
RA	4,980	A→G	5.4%	intergenic (‑599/+32)	trmF ← / ← trmE	tRNA uridine 5‑carboxymethylaminomethyl modification protein/GTPase
RA	6,429	Δ1 bp	7.6%	intergenic (‑47/+42)	trmE ← / ← oxaA	GTPase/membrane protein insertase
RA	6,433:1	+T	7.7%	intergenic (‑51/+38)	trmE ← / ← oxaA	GTPase/membrane protein insertase
RA	26,844	A→T	6.1%	intergenic (+40/+145)	PP_0021 → / ← PP_0022	hypothetical protein/hypothetical protein
RA	27,581	C→T	7.0%	intergenic (‑428/+18)	PP_0022 ← / ← PP_0023	hypothetical protein/hypothetical protein
RA	27,584	A→G	7.2%	intergenic (‑431/+15)	PP_0022 ← / ← PP_0023	hypothetical protein/hypothetical protein
RA	36,169	G→T	8.4%	intergenic (+54/+29)	PP_0032 → / ← PP_0033	hypothetical protein/undecaprenyl‑glycosyl transferase
RA	36,171	A→T	8.1%	intergenic (+56/+27)	PP_0032 → / ← PP_0033	hypothetical protein/undecaprenyl‑glycosyl transferase
RA	36,172	A→T	8.1%	intergenic (+57/+26)	PP_0032 → / ← PP_0033	hypothetical protein/undecaprenyl‑glycosyl transferase
RA	36,174	A→C	8.1%	intergenic (+59/+24)	PP_0032 → / ← PP_0033	hypothetical protein/undecaprenyl‑glycosyl transferase
RA	43,457	Δ1 bp	13.3%	intergenic (+23/+70)	PP_0040 → / ← cadA‑I	hypothetical protein/cadmium translocating P‑type ATPase
RA	43,461:1	+A	13.1%	intergenic (+27/+66)	PP_0040 → / ← cadA‑I	hypothetical protein/cadmium translocating P‑type ATPase
RA	58,747	T→A	9.2%	intergenic (‑658/+30)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,750	T→A	8.9%	intergenic (‑661/+27)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	68,598	T→G	6.9%	P225P (CCA→CCC)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,603	C→A	7.5%	G224W (GGG→TGG)	PP_0058 ←	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	72,283	T→A	5.1%	D189V (GAC→GTC)	glyQ ←	glycine‑tRNA ligase subunit alpha
RA	78,124	C→T	5.8%	A117T (GCC→ACC)	fmt ←	methionyl‑tRNA formyltransferase
RA	78,125	A→G	5.1%	G116G (GGT→GGC)	fmt ←	methionyl‑tRNA formyltransferase
RA	86,240	G→T	6.4%	L160M (CTG→ATG)	PP_0075 ←	choline sulfate transporter
RA	86,245	A→C	7.0%	M158R (ATG→AGG)	PP_0075 ←	choline sulfate transporter
RA	87,493	T→A	5.9%	N98I (AAT→ATT)	PP_0076 ←	choline betaine‑binding protein
RA	87,956	G→C	5.4%	R454R (CGC→CGG)	betC ←	choline‑sulfatase
RA	90,414	C→T	5.3%	intergenic (+89/+33)	PP_0079 → / ← PP_0080	transcriptional regulator/hypothetical protein
RA	98,690	A→T	6.1%	Q39L (CAG→CTG)	PP_0093 →	zinc protease
RA	104,318	C→A	6.0%	T159T (ACC→ACA)	PP_0099 →	hypothetical protein
RA	104,321	T→G	5.9%	I160M (ATT→ATG)	PP_0099 →	hypothetical protein
RA	126,115	A→G	5.9%	intergenic (+25/+25)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	126,116	C→T	5.8%	intergenic (+26/+24)	PP_0120 → / ← thrB	zinc ABC transporter/homoserine kinase
RA	146,127	T→A	8.2%	intergenic (+32/‑116)	gltP → / → PP_0138	glutamate/aspartate‑proton DAACS transporter/membrane protein
RA	146,128	T→A	8.1%	intergenic (+33/‑115)	gltP → / → PP_0138	glutamate/aspartate‑proton DAACS transporter/membrane protein
RA	150,829	G→T	5.1%	L41M (CTG→ATG)	PP_0142 ←	ABC transporter permease
RA	151,065	T→A	5.5%	intergenic (‑116/+16)	PP_0142 ← / ← PP_0143	ABC transporter permease/membrane protein
RA	151,068	G→A	5.3%	intergenic (‑119/+13)	PP_0142 ← / ← PP_0143	ABC transporter permease/membrane protein
RA	152,157	A→T	6.5%	intergenic (‑51/+43)	PP_0143 ← / ← PP_0144	membrane protein/insulinase family metalloprotease
RA	152,158	A→T	6.6%	intergenic (‑52/+42)	PP_0143 ← / ← PP_0144	membrane protein/insulinase family metalloprotease
RA	155,543	G→T	5.1%	intergenic (‑248/+35)	yjbB ← / ← ygdQ	Na+/Pi‑cotransporter/transport protein
RA	155,546	A→C	5.3%	intergenic (‑251/+32)	yjbB ← / ← ygdQ	Na+/Pi‑cotransporter/transport protein
RA	161,688	C→T	5.5%	intergenic (‑183/+63)	PP_0152 ← / ← PP_0153	hypothetical protein/hypothetical protein
RA	161,703	A→G	5.4%	intergenic (‑198/+48)	PP_0152 ← / ← PP_0153	hypothetical protein/hypothetical protein
RA	164,462	A→T	6.2%	L332Q (CTG→CAG)	pntB ←	pyridine nucleotide transhydrogenase subunit beta
RA	164,466	C→G	5.9%	G331R (GGC→CGC)	pntB ←	pyridine nucleotide transhydrogenase subunit beta
RA	181,805	T→C	8.1%	intergenic (+19/‑87)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	181,943	C→T	26.2%	noncoding (52/120 nt)	PP_5SB →	5S ribosomal RNA
RA	182,034	Δ1 bp	14.6%	intergenic (+23/+42)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036:1	+C	15.0%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	195,559	C→A	23.3%	T355T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	195,629	A→G	5.1%	T379A (ACC→GCC)	PP_0168 →	putative surface adhesion protein
RA	195,634	C→T	37.0%	T380T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	195,724	A→G	7.3%	V410V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	196,306	T→C	11.3%	N604N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	196,327	A→C	16.3%	T611T (ACA→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,351	C→G	19.4%	T619T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	196,390	T→C	29.6%	D632D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	196,579	G→A	14.0%	V695V (GTG→GTA)	PP_0168 →	putative surface adhesion protein
RA	196,795	G→C	9.4%	T767T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,879	G→A	25.9%	V795V (GTG→GTA)	PP_0168 →	putative surface adhesion protein
RA	197,032	C→T	9.9%	T846T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,089	T→C	19.7%	N865N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	197,551	C→G	15.2%	T1019T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	197,572	G→A	17.1%	K1026K (AAG→AAA)	PP_0168 →	putative surface adhesion protein
RA	197,590	T→C	19.4%	D1032D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,632	T→C	14.6%	T1046T (ACT→ACC)	PP_0168 →	putative surface adhesion protein
RA	197,695	G→C	9.0%	T1067T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	198,367	G→C	12.1%	V1291V (GTG→GTC)	PP_0168 →	putative surface adhesion protein
RA	198,777	T→A	8.8%	L1428Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	198,786	C→G	7.8%	T1431S (ACC→AGC)	PP_0168 →	putative surface adhesion protein
RA	202,212	A→G	5.1%	H2573R (CAC→CGC)	PP_0168 →	putative surface adhesion protein
RA	205,114	C→T	11.3%	G3540G (GGC→GGT)	PP_0168 →	putative surface adhesion protein
RA	205,120	A→C	11.6%	A3542A (GCA→GCC)	PP_0168 →	putative surface adhesion protein
RA	205,123	C→T	6.6%	T3543T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	205,126	G→C	10.7%	V3544V (GTG→GTC)	PP_0168 →	putative surface adhesion protein
RA	205,153	T→C	11.4%	G3553G (GGT→GGC)	PP_0168 →	putative surface adhesion protein
RA	210,699	T→A	11.1%	L5402Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	212,694	T→A	6.3%	L6067Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
RA	213,354	T→A	6.0%	L6287Q (CTG→CAG)	PP_0168 →	putative surface adhesion protein
JC	217,493	Δ4 bp	5.5%	coding (22999‑23002/26049 nt)	PP_0168 →	putative surface adhesion protein
RA	220,561	A→T	6.0%	intergenic (+18/‑110)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	220,562	C→G	5.2%	intergenic (+19/‑109)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	220,563	A→T	5.2%	intergenic (+20/‑108)	PP_0168 → / → PP_5431	putative surface adhesion protein/hypothetical protein
RA	226,226	T→A	9.5%	L151Q (CTG→CAG)	PP_0174 →	hypothetical protein
RA	226,659	T→C	6.5%	intergenic (+66/‑67)	PP_0174 → / → PP_0175	hypothetical protein/transcriptional regulator
RA	226,661	A→T	6.9%	intergenic (+68/‑65)	PP_0174 → / → PP_0175	hypothetical protein/transcriptional regulator
RA	226,663	G→A	6.9%	intergenic (+70/‑63)	PP_0174 → / → PP_0175	hypothetical protein/transcriptional regulator
RA	233,832	A→T	8.3%	intergenic (+20/+43)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,833	C→G	8.3%	intergenic (+21/+42)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,834	A→T	8.4%	intergenic (+22/+41)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	243,508	T→A	12.2%	*221C (TGA→TGT) ‡	fkl ←	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	243,510	A→T	12.6%	*221R (TGA→AGA) ‡	fkl ←	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	243,512	T→A	12.7%	D220V (GAC→GTC)	fkl ←	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	250,911	G→C	5.7%	R98G (CGC→GGC)	nfeD ←	membrane bound peptidase NefD
RA	250,912	G→C	6.2%	A97A (GCC→GCG)	nfeD ←	membrane bound peptidase NefD
RA	268,744	T→A	5.0%	intergenic (‑75/+25)	PP_0216 ← / ← desA	sensory box/GGDEF family protein/delta‑9 fatty acid desaturase
RA	272,981	G→C	6.5%	H263D (CAC→GAC)	metNB ←	methionine ABC transporter ATP‑binding protein
RA	284,587	T→A	15.6%	intergenic (+33/+30)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,588	T→A	15.6%	intergenic (+34/+29)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	287,068	G→C	6.1%	P19R (CCG→CGG) ‡	tauB‑II ←	taurine ABC transporter ATP‑binding protein
RA	287,069	G→C	6.1%	P19A (CCG→GCG) ‡	tauB‑II ←	taurine ABC transporter ATP‑binding protein
RA	292,607	C→G	6.1%	intergenic (+22/‑38)	ssuA → / → ssuD	aliphatic sulfonatesABC transporter substrate‑binding protein/alkanesulfonate monooxygenase
RA	308,575	C→T	5.8%	intergenic (+1589/‑281)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	308,740	C→T	5.2%	intergenic (+1754/‑116)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	313,851	T→C	7.7%	intergenic (+22/+29)	ygaU → / ← yrfG	murein cross‑linking regulator/purine nucleotidase
RA	313,852:1	+A	7.8%	intergenic (+23/+28)	ygaU → / ← yrfG	murein cross‑linking regulator/purine nucleotidase
RA	322,135	G→A	18.3%	intergenic (+420/+38)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,142	T→C	17.0%	intergenic (+427/+31)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	325,161	C→G	9.8%	P149A (CCA→GCA)	oprQ →	outer‑membrane porin D
RA	326,067	C→A	7.7%	*556Y (TAG→TAT)	PP_0269 ←	glutamate synthase large subunit
RA	326,070	T→G	7.7%	A555A (GCA→GCC)	PP_0269 ←	glutamate synthase large subunit
RA	337,812	A→G	14.7%	intergenic (‑59/+70)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,819:1	+A	10.9%	intergenic (‑66/+63)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,822	A→C	10.3%	intergenic (‑69/+60)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,825	C→G	10.0%	intergenic (‑72/+57)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,828	G→T	10.1%	intergenic (‑75/+54)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,830	Δ1 bp	10.4%	intergenic (‑77/+52)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,839	C→T	13.3%	intergenic (‑86/+43)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	338,068	G→T	7.3%	A168A (GCC→GCA)	PP_0280 ←	amino acid ABC transporter permease
RA	338,071	A→C	7.3%	S167R (AGT→AGG)	PP_0280 ←	amino acid ABC transporter permease
RA	343,610	T→A	7.1%	intergenic (‑163/‑77)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	343,611	G→C	7.1%	intergenic (‑164/‑76)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	343,612	T→A	6.8%	intergenic (‑165/‑75)	PP_5439 ← / → PP_5440	hypothetical protein/hypothetical protein
RA	344,035	A→G	7.1%	intergenic (+121/+68)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,044	Δ1 bp	5.6%	intergenic (+130/+59)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,048:1	+T	5.6%	intergenic (+134/+55)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	359,657	T→C	6.6%	intergenic (+14/+106)	gbdR → / ← PP_0299	AraC family transcriptional regulator/hypothetical protein
RA	359,684	G→A	5.1%	intergenic (+41/+79)	gbdR → / ← PP_0299	AraC family transcriptional regulator/hypothetical protein
RA	359,721	G→A	10.5%	intergenic (+78/+42)	gbdR → / ← PP_0299	AraC family transcriptional regulator/hypothetical protein
RA	359,728	T→G	9.6%	intergenic (+85/+35)	gbdR → / ← PP_0299	AraC family transcriptional regulator/hypothetical protein
RA	359,731	Δ1 bp	6.4%	intergenic (+88/+32)	gbdR → / ← PP_0299	AraC family transcriptional regulator/hypothetical protein
RA	359,732	T→C	6.5%	intergenic (+89/+31)	gbdR → / ← PP_0299	AraC family transcriptional regulator/hypothetical protein
RA	370,985	G→C	5.2%	A155P (GCT→CCT)	dgcA →	dimethylglycine dehydrogenase subunit
RA	373,762	A→G	5.3%	E334G (GAG→GGG)	dgcB →	dimethylglycine dehydrogenase subunit
RA	384,786	C→G	8.3%	R421G (CGC→GGC)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	384,790	A→T	8.3%	N422I (AAT→ATT)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	384,794	C→G	8.1%	A423A (GCC→GCG)	PP_0320 →	methyl‑accepting chemotaxis transducer
RA	407,673	G→C	5.3%	P112R (CCG→CGG)	aceF ←	AceF‑S‑acetyldihydrolipoate
RA	408,431	C→T	10.3%	A746T (GCC→ACC)	aceE ←	pyruvate dehydrogenase E1 component
RA	408,432	A→G	10.4%	G745G (GGT→GGC)	aceE ←	pyruvate dehydrogenase E1 component
RA	413,107	C→G	5.9%	A686A (GCC→GCG)	glnE →	glutamate‑ammonia‑ligase adenylyltransferase
RA	413,108	C→G	5.2%	R687G (CGC→GGC)	glnE →	glutamate‑ammonia‑ligase adenylyltransferase
RA	414,036	C→G	5.6%	intergenic (+53/‑150)	glnE → / → waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
RA	414,041	A→T	5.5%	intergenic (+58/‑145)	glnE → / → waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
RA	416,124	G→C	7.6%	D297H (GAC→CAC)	waaC →	ADP‑heptose‑‑LPS heptosyltransferase
RA	427,755	A→C	6.9%	L16R (CTG→CGG) ‡	PP_0350 ←	ferrichrome‑iron receptor
RA	427,756	G→T	6.4%	L16M (CTG→ATG) ‡	PP_0350 ←	ferrichrome‑iron receptor
RA	428,857	Δ1 bp	10.7%	coding (153/957 nt)	PP_0351 ←	transmembrane sensor
RA	428,861:1	+C	11.2%	coding (149/957 nt)	PP_0351 ←	transmembrane sensor
RA	432,018	C→T	5.5%	C100Y (TGC→TAC) ‡	PP_0354 ←	CBS domain‑containing protein
RA	432,019	A→G	5.5%	C100R (TGC→CGC) ‡	PP_0354 ←	CBS domain‑containing protein
RA	432,022	C→T	5.4%	E99K (GAG→AAG)	PP_0354 ←	CBS domain‑containing protein
RA	445,098	T→C	6.3%	intergenic (+68/‑220)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,108	A→T	6.5%	intergenic (+78/‑210)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,110	T→G	6.4%	intergenic (+80/‑208)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	463,680	T→C	6.0%	K474E (AAA→GAA)	davB ←	lysine 2‑monooxygenase
RA	463,681	G→A	6.4%	F473F (TTC→TTT)	davB ←	lysine 2‑monooxygenase
RA	467,101	A→G	7.0%	intergenic (‑31/+22)	PP_5445 ← / ← PP_t71	hypothetical protein/tRNA‑Met
RA	467,104	C→T	8.4%	intergenic (‑34/+19)	PP_5445 ← / ← PP_t71	hypothetical protein/tRNA‑Met
RA	471,069	T→C	6.5%	intergenic (‑110/+18)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	471,070	G→A	6.7%	intergenic (‑111/+17)	PP_0386 ← / ← rpoD	sensory box protein/RNA polymerase sigma 70 factor
RA	492,234	G→A	5.1%	H64Y (CAC→TAC)	lptD ←	LPS‑assembly protein LptD
RA	495,966	G→C	8.8%	A24G (GCC→GGC)	PP_0408 ←	hypothetical protein
RA	495,969	A→T	8.5%	L23Q (CTG→CAG)	PP_0408 ←	hypothetical protein
RA	495,972	G→C	8.3%	A22G (GCC→GGC)	PP_0408 ←	hypothetical protein
RA	496,099	T→A	8.5%	intergenic (‑63/‑33)	PP_0408 ← / → PP_0409	hypothetical protein/two‑component system sensor histidine kinase
RA	498,044	A→C	7.6%	D638A (GAT→GCT)	PP_0409 →	two‑component system sensor histidine kinase
RA	498,050	T→A	6.3%	L640Q (CTG→CAG)	PP_0409 →	two‑component system sensor histidine kinase
RA	498,056	G→T	7.1%	S642I (AGC→ATC)	PP_0409 →	two‑component system sensor histidine kinase
RA	503,595	T→C	8.5%	F208S (TTT→TCT) ‡	PP_0414 →	polyamine ABC transporter permease
RA	503,596	T→A	8.5%	F208L (TTT→TTA) ‡	PP_0414 →	polyamine ABC transporter permease
RA	503,597	G→A	8.4%	D209N (GAC→AAC)	PP_0414 →	polyamine ABC transporter permease
RA	503,828	Δ1 bp	8.5%	intergenic (+28/‑123)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,834	A→T	9.8%	intergenic (+34/‑117)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,835	A→T	9.0%	intergenic (+35/‑116)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	503,840:1	+C	6.5%	intergenic (+40/‑111)	PP_0414 → / → rpe	polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase
RA	514,014	G→T	8.4%	intergenic (+45/+32)	yhfA → / ← PP_0426	hypothetical protein/membrane protein
RA	514,015	A→C	7.9%	intergenic (+46/+31)	yhfA → / ← PP_0426	hypothetical protein/membrane protein
RA	514,023	C→T	6.4%	intergenic (+54/+23)	yhfA → / ← PP_0426	hypothetical protein/membrane protein
RA	524,339	A→G	9.4%	intergenic (+203/‑613)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,352	G→C	14.9%	intergenic (+216/‑600)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,355	G→C	14.1%	intergenic (+219/‑597)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,368	C→T	15.4%	intergenic (+232/‑584)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	537,193	C→T	5.6%	Q52* (CAG→TAG)	rplL →	50S ribosomal protein L7/L12
RA	537,575	G→T	7.1%	intergenic (+102/‑51)	PP_mr07 → / → rpoB	P26 ncRNA/DNA‑directed RNA polymerase subunit beta
RA	537,582	C→G	6.2%	intergenic (+109/‑44)	PP_mr07 → / → rpoB	P26 ncRNA/DNA‑directed RNA polymerase subunit beta
RA	543,730	A→G	7.0%	N656S (AAC→AGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,733	C→T	7.0%	A657V (GCT→GTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	550,089	Δ1 bp	6.4%	coding (761/1194 nt)	tufB →	elongation factor Tu‑B
RA	550,552	C→G	17.9%	intergenic (+30/‑112)	tufB → / → rpsJ	elongation factor Tu‑B/30S ribosomal protein S10
RA	557,335	Δ1 bp	9.9%	intergenic (+75/‑134)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	557,339:1	+A	10.3%	intergenic (+79/‑130)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	564,380:1	+A	9.6%	intergenic (+29/‑144)	rplQ → / → katA	50S ribosomal protein L17/catalase
RA	564,385	Δ1 bp	9.9%	intergenic (+34/‑139)	rplQ → / → katA	50S ribosomal protein L17/catalase
RA	571,620	G→A	8.0%	intergenic (+43/+48)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	571,621	T→C	8.1%	intergenic (+44/+47)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	572,521	A→G	6.0%	I191T (ATC→ACC)	PP_0486 ←	GntR family transcriptional regulator
RA	572,528	C→T	5.1%	V189M (GTG→ATG)	PP_0486 ←	GntR family transcriptional regulator
RA	587,079	C→G	7.7%	P43R (CCG→CGG)	PP_0497 →	Cro/CI family transcriptional regulator
RA	600,407	G→T	5.5%	R77R (CGG→CGT)	nrdR →	DNA‑binding transcriptional repressor NrdR
RA	605,124	G→A	6.8%	R145H (CGC→CAC)	thiL →	thiamin monophosphate kinase
RA	605,129	A→T	6.9%	S147C (AGC→TGC)	thiL →	thiamin monophosphate kinase
RA	605,134	T→C	6.9%	G148G (GGT→GGC)	thiL →	thiamin monophosphate kinase
RA	614,609	A→T	6.2%	I214N (ATT→AAT)	ispA ←	farnesyl diphosphate synthase
RA	620,698	G→T	6.2%	intergenic (‑6/‑176)	PP_0534 ← / → PP_0535	transcriptional regulator PfeR/ferric siderophore receptor
RA	646,275	T→A	10.7%	intergenic (‑178/‑106)	PP_0556 ← / → acoR	acetoin catabolism protein/acetoin catabolism regulatory protein
RA	654,401	C→A	10.0%	L115L (CTG→CTT)	ctpL ←	methyl‑accepting chemotaxis protein CtpL
RA	654,406	T→G	12.4%	K114Q (AAG→CAG)	ctpL ←	methyl‑accepting chemotaxis protein CtpL
RA	670,788	C→T	5.9%	Q743* (CAG→TAG) ‡	pbpC →	peptidoglycan glycosyltransferase
RA	670,789	A→G	5.8%	Q743R (CAG→CGG) ‡	pbpC →	peptidoglycan glycosyltransferase
RA	681,339	C→T	9.1%	R646H (CGC→CAC)	PP_0584 ←	methyl‑accepting chemotaxis transducer
RA	697,206	T→C	6.3%	intergenic (+130/‑621)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,217	T→C	8.6%	intergenic (+141/‑610)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,228	C→G	11.5%	intergenic (+152/‑599)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,231	C→G	12.4%	intergenic (+155/‑596)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,242	G→A	6.7%	intergenic (+166/‑585)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	697,253	G→A	5.4%	intergenic (+177/‑574)	mmsA‑I → / → PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA
RA	699,725	A→G	47.7%	intergenic (+115/‑129)	PP_t06 → / → PP_23SD	tRNA‑Ala/23S ribosomal RNA
RA	702,766:1	+G	6.2%	intergenic (+11/‑121)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,769	Δ1 bp	6.1%	intergenic (+14/‑118)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	709,861	C→G	5.9%	A201A (GCC→GCG)	ribF →	bifunctional riboflavin kinase/FMN adenylyltransferase
RA	709,862	C→G	5.9%	R202G (CGC→GGC)	ribF →	bifunctional riboflavin kinase/FMN adenylyltransferase
RA	715,012:1	+T	12.1%	intergenic (+75/+2)	ispH → / ← PP_0607	4‑hydroxy‑3‑methylbut‑2‑enyl diphosphate reductase/type IV pili biogenesis protein FimT
RA	715,019	Δ1 bp	11.7%	coding (478/483 nt)	PP_0607 ←	type IV pili biogenesis protein FimT
RA	726,621:1	+T	6.2%	coding (136/765 nt)	PP_0620 ←	GntR family transcriptional regulator
RA	727,318	C→T	8.2%	W6* (TGG→TAG) ‡	PP_0621 ←	hypothetical protein
RA	727,319	A→T	7.9%	W6R (TGG→AGG) ‡	PP_0621 ←	hypothetical protein
RA	727,320	A→G	7.9%	P5P (CCT→CCC)	PP_0621 ←	hypothetical protein
RA	733,648	A→T	11.5%	intergenic (+19/‑28)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	733,649	A→T	11.6%	intergenic (+20/‑27)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	733,650	A→T	13.4%	intergenic (+21/‑26)	PP_t09 → / → PP_t10	tRNA‑Lys/tRNA‑Pro
RA	733,852	C→T	5.0%	intergenic (+19/+172)	PP_t11 → / ← ndh	tRNA‑Lys/NADH dehydrogenase
RA	733,853	A→G	5.0%	intergenic (+20/+171)	PP_t11 → / ← ndh	tRNA‑Lys/NADH dehydrogenase
RA	733,854	T→C	5.1%	intergenic (+21/+170)	PP_t11 → / ← ndh	tRNA‑Lys/NADH dehydrogenase
RA	743,423	C→T	5.8%	intergenic (+99/+175)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,433	G→A	14.1%	intergenic (+109/+165)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,435	A→C	14.2%	intergenic (+111/+163)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,442	T→G	12.3%	intergenic (+118/+156)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,443	T→A	11.8%	intergenic (+119/+155)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,444	C→A	11.7%	intergenic (+120/+154)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,451	G→T	13.0%	intergenic (+127/+147)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,453	T→C	13.3%	intergenic (+129/+145)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,463	A→G	11.6%	intergenic (+139/+135)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	780,563	G→T	5.7%	intergenic (‑90/+32)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	788,584	C→A	9.8%	intergenic (+31/‑182)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,586	A→T	6.0%	intergenic (+33/‑180)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,587	A→T	5.9%	intergenic (+34/‑179)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	788,589	T→G	6.9%	intergenic (+36/‑177)	ettA → / → gdhA	ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
RA	797,512	G→A	6.5%	intergenic (+33/‑44)	PP_0682 → / → PP_0683	inner membrane protein/hypothetical protein
RA	799,838	A→T	6.5%	L213Q (CTG→CAG)	ispB ←	octaprenyl diphosphate synthase
RA	799,844	T→A	6.6%	D211V (GAC→GTC)	ispB ←	octaprenyl diphosphate synthase
RA	815,449	G→A	5.5%	A312T (GCC→ACC)	fsr‑I →	fosmidomycin efflux system
RA	838,006	Δ1 bp	6.5%	intergenic (‑39/+41)	pth ← / ← rplY	peptidyl‑tRNA hydrolase/50S ribosomal protein L25/general stress protein Ctc
RA	838,010:1	+C	6.5%	intergenic (‑43/+37)	pth ← / ← rplY	peptidyl‑tRNA hydrolase/50S ribosomal protein L25/general stress protein Ctc
RA	848,506	G→A	7.6%	L23F (CTT→TTT)	PP_0730 ←	hypothetical protein
RA	848,508	C→G	6.0%	R22P (CGG→CCG)	PP_0730 ←	hypothetical protein
RA	848,510	T→C	6.9%	K21K (AAA→AAG)	PP_0730 ←	hypothetical protein
RA	861,659	C→A	7.3%	G36C (GGC→TGC)	PP_0742 ←	hypothetical protein
RA	868,013	G→C	7.3%	intergenic (+108/+69)	PP_0750 → / ← mqo‑I	hypothetical protein/malate:quinone oxidoreductase
RA	868,518	T→C	5.9%	K358R (AAG→AGG)	mqo‑I ←	malate:quinone oxidoreductase
RA	870,234	A→C	6.5%	A64A (GCT→GCG)	PP_5456 ←	hypothetical protein
RA	874,539:1	+T	6.7%	coding (115/840 nt)	PP_0759 →	hypothetical protein
RA	874,543	Δ1 bp	6.5%	coding (119/840 nt)	PP_0759 →	hypothetical protein
RA	876,018	G→C	10.5%	noncoding (105/142 nt)	PP_mr65 ←	YybP‑YkoY
RA	876,021	G→C	10.4%	noncoding (102/142 nt)	PP_mr65 ←	YybP‑YkoY
RA	894,394	C→T	5.6%	G115G (GGC→GGT)	slyD →	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	894,404	A→G	5.8%	T119A (ACC→GCC)	slyD →	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	895,213	G→C	8.7%	intergenic (+50/+14)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,219	G→A	8.5%	intergenic (+56/+8)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	895,222	G→C	5.0%	intergenic (+59/+5)	PP_0777 → / ← PP_0778	glutathione peroxidase/group 1 family glycosyl transferase
RA	906,835	A→T	7.2%	K92* (AAG→TAG) ‡	PP_0790 →	inner membrane protein AmpE
RA	906,836	A→T	6.5%	K92M (AAG→ATG) ‡	PP_0790 →	inner membrane protein AmpE
RA	912,065	A→T	6.1%	D857V (GAC→GTC)	fruB →	PTS fructose transporter subunit EI/HPr/IIA
RA	912,283	C→A	5.0%	L930M (CTG→ATG)	fruB →	PTS fructose transporter subunit EI/HPr/IIA
RA	917,638	Δ1 bp	5.2%	intergenic (‑69/+130)	PP_0798 ← / ← opdC	GGDEF domain‑containing protein/histidine‑specific outer membrane porin D
RA	917,640:1	+C	5.5%	intergenic (‑71/+128)	PP_0798 ← / ← opdC	GGDEF domain‑containing protein/histidine‑specific outer membrane porin D
RA	924,322	Δ1 bp	7.9%	coding (874/2169 nt)	PP_0804 ←	protein secretion ABC transporter permease/ATP‑binding protein
RA	924,324:1	+A	7.3%	coding (872/2169 nt)	PP_0804 ←	protein secretion ABC transporter permease/ATP‑binding protein
RA	931,500	G→T	5.3%	L4709I (CTC→ATC)	PP_0806 ←	surface adhesion protein
RA	931,505	A→T	7.6%	V4707D (GTC→GAC)	PP_0806 ←	surface adhesion protein
RA	931,510	A→C	6.9%	D4705E (GAT→GAG)	PP_0806 ←	surface adhesion protein
RA	944,829	A→T	6.3%	S266T (TCG→ACG)	PP_0806 ←	surface adhesion protein
RA	944,834	G→A	6.4%	P264L (CCC→CTC)	PP_0806 ←	surface adhesion protein
RA	944,837	T→C	5.3%	E263G (GAG→GGG)	PP_0806 ←	surface adhesion protein
RA	955,151	Δ1 bp	18.2%	intergenic (+102/‑211)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,152	A→G	11.4%	intergenic (+103/‑210)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,154	G→A	11.3%	intergenic (+105/‑208)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,155	T→A	29.6%	intergenic (+106/‑207)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,156	T→A	20.3%	intergenic (+107/‑206)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,158	C→T	12.0%	intergenic (+109/‑204)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	955,158:1	+T	21.1%	intergenic (+109/‑204)	cyoE → / → alaC	protoheme IX farnesyltransferase/aminotransferase
RA	956,586	G→T	8.1%	intergenic (+16/‑98)	alaC → / → PP_0818	aminotransferase/hypothetical protein
RA	956,587	A→T	9.4%	intergenic (+17/‑97)	alaC → / → PP_0818	aminotransferase/hypothetical protein
RA	956,588	A→C	8.3%	intergenic (+18/‑96)	alaC → / → PP_0818	aminotransferase/hypothetical protein
RA	961,712	G→C	5.3%	L236V (CTG→GTG)	selD ←	selenide, water dikinase
RA	961,713	G→C	6.4%	H235Q (CAC→CAG)	selD ←	selenide, water dikinase
RA	967,418	A→T	7.8%	F136Y (TTC→TAC) ‡	PP_0830 ←	acetyltransferase
RA	967,419	A→T	7.5%	F136I (TTC→ATC) ‡	PP_0830 ←	acetyltransferase
RA	968,878	G→T	7.1%	intergenic (‑308/+23)	PP_0831 ← / ← PP_t68	hypothetical protein/tRNA‑Leu
RA	968,881	A→C	6.8%	intergenic (‑311/+20)	PP_0831 ← / ← PP_t68	hypothetical protein/tRNA‑Leu
RA	972,118	T→A	7.7%	L136Q (CTG→CAG)	secD →	protein translocase subunit SecD
RA	972,121	T→A	7.6%	L137Q (CTG→CAG)	secD →	protein translocase subunit SecD
RA	975,290	A→T	11.3%	intergenic (+136/+33)	ycfJ → / ← suhB	flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase
RA	975,291	A→T	12.2%	intergenic (+137/+32)	ycfJ → / ← suhB	flagella biosyntheis regulator/bifunctional inositol monophosphatase/glycerol‑2‑phosphatase
RA	979,120	A→T	5.7%	E189D (GAA→GAT)	iscS‑I →	cysteine desulfurase
RA	979,121	A→T	5.7%	I190F (ATC→TTC)	iscS‑I →	cysteine desulfurase
RA	991,557	G→A	6.9%	G59D (GGT→GAT)	der →	GTPase Der
RA	991,560	T→C	6.7%	I60T (ATC→ACC)	der →	GTPase Der
RA	1,001,196	A→T	11.5%	Q57L (CAG→CTG)	PP_0863 →	hypothetical protein
RA	1,001,199	A→T	11.5%	Q58L (CAG→CTG)	PP_0863 →	hypothetical protein
RA	1,005,623	C→A	7.2%	L184M (CTG→ATG) ‡	PP_0867 →	FecA‑like outer membrane receptor
RA	1,005,624	T→G	6.6%	L184R (CTG→CGG) ‡	PP_0867 →	FecA‑like outer membrane receptor
RA	1,011,776	A→T	5.4%	K62M (AAG→ATG)	prfC →	peptide chain release factor 3
RA	1,011,784	G→T	5.8%	G65C (GGC→TGC)	prfC →	peptide chain release factor 3
RA	1,011,787	A→T	5.2%	I66F (ATC→TTC)	prfC →	peptide chain release factor 3
RA	1,013,231	A→T	10.9%	intergenic (+56/+75)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,237	C→A	13.8%	intergenic (+62/+69)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,238	A→T	14.1%	intergenic (+63/+68)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,244	G→C	13.1%	intergenic (+69/+62)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,245	G→C	13.1%	intergenic (+70/+61)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,251	A→T	13.9%	intergenic (+76/+55)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,252	T→G	15.6%	intergenic (+77/+54)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,258	A→T	14.3%	intergenic (+83/+48)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,030,972	C→G	6.8%	P343A (CCG→GCG)	PP_0887 →	sensor histidine kinase
RA	1,030,975	C→G	6.7%	P344A (CCG→GCG)	PP_0887 →	sensor histidine kinase
RA	1,031,922	T→A	5.7%	L5M (TTG→ATG) ‡	PP_0889 →	hypothetical protein
RA	1,031,923	T→A	5.7%	L5* (TTG→TAG) ‡	PP_0889 →	hypothetical protein
RA	1,033,806	T→A	7.0%	D141E (GAT→GAA)	PP_0891 →	hypothetical protein
RA	1,033,811	G→C	7.5%	R143P (CGG→CCG)	PP_0891 →	hypothetical protein
RA	1,033,816	T→A	8.4%	F145I (TTC→ATC)	PP_0891 →	hypothetical protein
RA	1,037,852	C→A	7.0%	intergenic (+94/+22)	PP_0896 → / ← PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
RA	1,037,853	A→G	7.0%	intergenic (+95/+21)	PP_0896 → / ← PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
RA	1,041,942	A→C	9.3%	E141A (GAG→GCG)	colR →	two‑component system response regulator
RA	1,041,945	T→G	9.1%	V142G (GTT→GGT)	colR →	two‑component system response regulator
RA	1,041,948	C→A	9.4%	T143N (ACC→AAC)	colR →	two‑component system response regulator
RA	1,041,951	G→T	8.9%	R144L (CGC→CTC)	colR →	two‑component system response regulator
RA	1,045,255	G→A	8.9%	intergenic (+25/+81)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,261	T→C	12.2%	intergenic (+31/+75)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,265	G→A	13.4%	intergenic (+35/+71)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,268	T→C	12.6%	intergenic (+38/+68)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,272	G→A	13.8%	intergenic (+42/+64)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,046,230	C→G	5.6%	M717I (ATG→ATC)	PP_0906 ←	RND family multidrug transporter
RA	1,046,233	C→G	5.2%	S716S (TCG→TCC)	PP_0906 ←	RND family multidrug transporter
RA	1,047,558	C→T	6.5%	D275N (GAC→AAC)	PP_0906 ←	RND family multidrug transporter
RA	1,060,099	Δ1 bp	5.6%	coding (242/891 nt)	iciA →	chromosome initiation inhibitor
RA	1,070,265	G→C	26.7%	intergenic (+62/+82)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,268	G→C	27.3%	intergenic (+65/+79)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,075,803	T→G	5.7%	A172A (GCT→GCG)	mreB →	cell wall structural actin‑like protein MreB
RA	1,088,808	T→C	6.3%	W16R (TGG→CGG)	PP_0943 →	hypothetical protein
RA	1,090,034	C→A	6.1%	P297Q (CCG→CAG)	fumC‑I →	class 2 fumarate hydratase
RA	1,090,037	T→G	6.5%	L298R (CTG→CGG)	fumC‑I →	class 2 fumarate hydratase
RA	1,096,740	G→C	6.7%	A76G (GCC→GGC)	lptB ←	ABC transporter ATP‑binding protein
RA	1,096,745	G→C	7.1%	G74G (GGC→GGG)	lptB ←	ABC transporter ATP‑binding protein
RA	1,123,943	T→A	7.0%	intergenic (‑138/+83)	PP_mr13 ← / ← gcvT‑I	cspA regulatory region/aminomethyltransferase
RA	1,123,948	T→A	6.9%	intergenic (‑143/+78)	PP_mr13 ← / ← gcvT‑I	cspA regulatory region/aminomethyltransferase
RA	1,130,143:1	+T	5.4%	intergenic (‑192/+112)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,130,146	Δ1 bp	5.3%	intergenic (‑195/+109)	gcvH‑I ← / ← PP_0990	glycine cleavage system protein H/DoxX family protein
RA	1,134,095	A→T	6.8%	intergenic (+34/+44)	PP_0995 → / ← gltS	membrane protein/glutamate:sodium symporter
RA	1,145,439	C→T	15.0%	intergenic (‑100/+41)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,446	G→A	18.7%	intergenic (‑107/+34)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,447	T→C	18.7%	intergenic (‑108/+33)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,145,454	A→G	16.8%	intergenic (‑115/+26)	hemO ← / ← PP_1006	heme oxygenase/heme receptor
RA	1,148,799	G→T	6.1%	T151K (ACG→AAG)	PP_1007 ←	transmembrane sensor
RA	1,148,802	A→C	6.0%	L150R (CTT→CGT)	PP_1007 ←	transmembrane sensor
RA	1,151,972	C→T	7.6%	Q231* (CAG→TAG) ‡	edd →	phosphogluconate dehydratase
RA	1,151,973	A→G	7.8%	Q231R (CAG→CGG) ‡	edd →	phosphogluconate dehydratase
RA	1,151,981	A→T	6.3%	M234L (ATG→TTG)	edd →	phosphogluconate dehydratase
RA	1,156,327	T→C	17.1%	intergenic (+24/‑192)	PP_1013 → / → yihS	sensor histidine kinase/aldose‑ketose isomerase
RA	1,165,334	A→G	11.8%	I26T (ATC→ACC)	hexR ←	DNA‑binding transcriptional regulator
RA	1,189,041	A→G	5.2%	intergenic (+25/+17)	PP_1038 → / ← tatC‑I	hypothetical protein/Sec‑independent protein translocase protein
RA	1,193,934	T→A	6.4%	L23M (TTG→ATG) ‡	uxpA →	lipoprotein UxpA
RA	1,193,935	T→A	6.3%	L23* (TTG→TAG) ‡	uxpA →	lipoprotein UxpA
RA	1,199,573	C→G	5.4%	A141G (GCC→GGC)	gspF →	protein secretion protein
RA	1,207,688	T→C	6.1%	D440G (GAC→GGC)	PP_1058 ←	hypothetical protein
RA	1,207,691	G→A	6.0%	A439V (GCC→GTC)	PP_1058 ←	hypothetical protein
RA	1,209,553	C→G	5.9%	G52G (GGC→GGG)	ytnA →	amino acid permease YtnA
RA	1,212,026	C→G	6.0%	Q149H (CAG→CAC)	PP_1060 ←	glutamate synthase large subunit
RA	1,219,156	C→T	5.8%	D229D (GAC→GAT)	PP_1064 →	alpha/beta family hydrolase
RA	1,232,739:1	+T	6.8%	intergenic (‑21/+196)	glpD ← / ← glpR	aerobic glycerol‑3‑phosphate dehydrogenase/DNA‑binding transcriptional repressor GlpR
RA	1,232,743	Δ1 bp	6.8%	intergenic (‑25/+192)	glpD ← / ← glpR	aerobic glycerol‑3‑phosphate dehydrogenase/DNA‑binding transcriptional repressor GlpR
RA	1,237,662	C→T	7.1%	L151L (CTG→CTA) ‡	PP_1078 ←	ABC transporter ATP‑binding protein
RA	1,237,663	A→G	7.6%	L151P (CTG→CCG) ‡	PP_1078 ←	ABC transporter ATP‑binding protein
RA	1,237,671	G→A	11.1%	A148A (GCC→GCT)	PP_1078 ←	ABC transporter ATP‑binding protein
RA	1,240,064	A→T	13.7%	D220V (GAC→GTC)	PP_1080 →	molybdopterin‑binding oxidoreductase
RA	1,244,374	A→G	7.1%	G39G (GGT→GGC) ‡	rnt ←	ribonuclease T
RA	1,244,375	C→G	6.9%	G39A (GGT→GCT) ‡	rnt ←	ribonuclease T
RA	1,244,376	C→T	6.8%	G39S (GGT→AGT) ‡	rnt ←	ribonuclease T
RA	1,245,336	G→C	7.9%	A66A (GCC→GCG)	pyrC ←	dihydroorotase
RA	1,245,340	G→C	8.3%	P65R (CCG→CGG)	pyrC ←	dihydroorotase
RA	1,245,344	G→C	7.3%	R64G (CGC→GGC)	pyrC ←	dihydroorotase
RA	1,248,219	C→A	6.6%	intergenic (+26/+42)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,248,220	T→C	6.7%	intergenic (+27/+41)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,248,223	G→A	5.8%	intergenic (+30/+38)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,248,224	T→G	5.9%	intergenic (+31/+37)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,249,755	A→T	10.2%	intergenic (+22/+49)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,249,757	C→G	10.8%	intergenic (+24/+47)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,249,759	A→T	11.0%	intergenic (+26/+45)	bvgA → / ← PP_1091	virulence factors transcription regulator BvgA/hypothetical protein
RA	1,253,435	G→C	8.0%	intergenic (‑75/+32)	PP_1096 ← / ← metG	electron transport complex protein/methionine‑‑tRNA ligase
RA	1,253,437	A→T	7.9%	intergenic (‑77/+30)	PP_1096 ← / ← metG	electron transport complex protein/methionine‑‑tRNA ligase
RA	1,253,439	G→C	8.0%	intergenic (‑79/+28)	PP_1096 ← / ← metG	electron transport complex protein/methionine‑‑tRNA ligase
RA	1,266,695	A→T	7.1%	A433A (GCT→GCA)	quiP ←	acyl‑homoserine lactone acylase QuiP
RA	1,266,698	A→T	7.3%	A432A (GCT→GCA)	quiP ←	acyl‑homoserine lactone acylase QuiP
RA	1,267,254	G→C	6.7%	A247G (GCC→GGC)	quiP ←	acyl‑homoserine lactone acylase QuiP
RA	1,275,090	G→C	7.0%	intergenic (‑281/+31)	PP_5462 ← / ← PP_5463	hypothetical protein/hypothetical protein
RA	1,275,093	G→C	7.1%	intergenic (‑284/+28)	PP_5462 ← / ← PP_5463	hypothetical protein/hypothetical protein
RA	1,286,005	A→C	6.9%	intergenic (+61/+56)	PP_1123 → / ← PP_1124	hypothetical protein/membrane protein
RA	1,286,008	C→G	7.4%	intergenic (+64/+53)	PP_1123 → / ← PP_1124	hypothetical protein/membrane protein
RA	1,286,011	G→T	7.5%	intergenic (+67/+50)	PP_1123 → / ← PP_1124	hypothetical protein/membrane protein
RA	1,291,468	A→C	5.9%	K85Q (AAG→CAG)	estC →	carboxylesterase
RA	1,291,473	G→T	6.4%	L86L (CTG→CTT)	estC →	carboxylesterase
RA	1,295,019	Δ1 bp	10.9%	intergenic (+29/+41)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,295,024	T→A	11.8%	intergenic (+34/+36)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,295,027	T→A	11.8%	intergenic (+37/+33)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,295,031:1	+T	9.7%	intergenic (+41/+29)	slyB → / ← nhaA‑I	outer membrane lipoprotein/Na(+)/H(+) antiporter NhaA
RA	1,307,446	C→G	8.7%	G60R (GGC→CGC)	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,307,447	C→G	8.5%	A59A (GCG→GCC)	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,307,455	T→G	6.4%	N57H (AAC→CAC)	livK ←	branched‑chain amino acids ABC transporter substrate‑binding protein
RA	1,310,449	G→C	5.9%	L364V (CTG→GTG)	PP_1144 ←	membrane protein
RA	1,310,451	T→A	5.9%	D363V (GAC→GTC)	PP_1144 ←	membrane protein
RA	1,310,453	G→C	5.8%	H362Q (CAC→CAG)	PP_1144 ←	membrane protein
RA	1,327,127	C→T	43.6%	intergenic (+97/‑196)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,350,507	T→A	8.2%	K11N (AAA→AAT) ‡	PP_1176 ←	hypothetical protein
RA	1,350,508	T→A	8.4%	K11I (AAA→ATA) ‡	PP_1176 ←	hypothetical protein
RA	1,354,271	G→T	5.9%	S371Y (TCC→TAC) ‡	nrdA ←	ribonucleoside‑diphosphate reductase subunit alpha
RA	1,354,272	A→C	6.4%	S371A (TCC→GCC) ‡	nrdA ←	ribonucleoside‑diphosphate reductase subunit alpha
RA	1,366,554	T→G	5.5%	E51A (GAG→GCG)	PP_1191 ←	S4 domain‑containing protein
RA	1,366,557	A→T	5.2%	V50D (GTC→GAC)	PP_1191 ←	S4 domain‑containing protein
RA	1,366,560	C→A	5.3%	R49L (CGC→CTC)	PP_1191 ←	S4 domain‑containing protein
RA	1,376,327	A→T	10.7%	intergenic (+30/+19)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,328	G→C	10.4%	intergenic (+31/+18)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,376,329	A→T	10.7%	intergenic (+32/+17)	kup → / ← PP_1201	potassium transport system protein Kup/hypothetical protein
RA	1,382,332	A→T	5.6%	intergenic (+12/+15)	dinB → / ← PP_1204	DNA polymerase IV/lipoprotein
RA	1,389,952	C→G	6.5%	A23G (GCC→GGC)	PP_1212 →	hypothetical protein
RA	1,389,957	C→G	6.5%	P25A (CCG→GCG)	PP_1212 →	hypothetical protein
RA	1,391,002	G→C	7.3%	G268A (GGC→GCC)	aspS →	aspartate‑‑tRNA ligase
RA	1,392,921	T→C	11.3%	intergenic (+85/‑101)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,923	A→G	11.4%	intergenic (+87/‑99)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,925	G→A	10.9%	intergenic (+89/‑97)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,927:1	+A	10.7%	intergenic (+91/‑95)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,933	C→G	13.1%	intergenic (+97/‑89)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,400,878	C→A	6.6%	intergenic (+35/‑134)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,400,880	A→T	7.1%	intergenic (+37/‑132)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,400,882	T→G	7.8%	intergenic (+39/‑130)	ybgF → / → queE	TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase
RA	1,403,596	G→A	28.6%	intergenic (‑56/+25)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,403,597	T→C	28.3%	intergenic (‑57/+24)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,425,657	T→C	8.8%	intergenic (+52/‑453)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,425,662	C→T	9.0%	intergenic (+57/‑448)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,425,663	A→G	8.8%	intergenic (+58/‑447)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,425,668	G→A	8.9%	intergenic (+63/‑442)	PP_1249 → / → PP_1250	DUF4223 domain‑containing protein/group II intron‑encoding maturase
RA	1,431,349	C→A	26.8%	V460V (GTC→GTA)	PP_1252 →	group II intron‑encoding maturase
RA	1,458,124	T→G	6.9%	intergenic (+17/+23)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,458,126	A→T	6.5%	intergenic (+19/+21)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,458,128	C→A	6.6%	intergenic (+21/+19)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,464,203	G→A	7.0%	T474T (ACC→ACT) ‡	algX ←	alginate biosynthesis protein AlgX
RA	1,464,205	T→A	6.4%	T474S (ACC→TCC) ‡	algX ←	alginate biosynthesis protein AlgX
RA	1,464,207	T→C	6.3%	Q473R (CAG→CGG)	algX ←	alginate biosynthesis protein AlgX
RA	1,469,818	A→T	5.1%	L111Q (CTG→CAG)	algK ←	alginate biosynthesis protein AlgK
RA	1,475,002	T→G	20.7%	intergenic (‑775/+26)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,475,003	C→A	19.7%	intergenic (‑776/+25)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,476,192	A→C	5.6%	Q83P (CAG→CCG)	PP_1290 →	polysaccharide deacetylase family protein
RA	1,476,195	T→A	5.6%	I84N (ATT→AAT)	PP_1290 →	polysaccharide deacetylase family protein
RA	1,476,198	G→T	6.4%	R85L (CGG→CTG)	PP_1290 →	polysaccharide deacetylase family protein
RA	1,481,522	T→C	7.3%	S75G (AGC→GGC)	rhlB ←	ATP‑dependent RNA helicase RhlB
RA	1,481,523	G→A	7.7%	A74A (GCC→GCT)	rhlB ←	ATP‑dependent RNA helicase RhlB
RA	1,488,064	T→A	7.1%	K89M (AAG→ATG) ‡	degS ←	serine endoprotease DegS
RA	1,488,065	T→A	7.3%	K89* (AAG→TAG) ‡	degS ←	serine endoprotease DegS
RA	1,488,073	T→A	7.4%	Y86F (TAC→TTC)	degS ←	serine endoprotease DegS
RA	1,491,138	Δ1 bp	7.7%	coding (794/1902 nt)	cysNC →	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase
RA	1,491,144	G→C	9.6%	S267T (AGT→ACT)	cysNC →	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase
RA	1,491,149:1	+A	8.6%	coding (805/1902 nt)	cysNC →	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase
RA	1,493,494	A→T	5.7%	W462R (TGG→AGG)	PP_1306 ←	Pyocin S‑type killer domain‑containing protein
RA	1,504,076	T→A	8.3%	intergenic (+34/‑229)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,504,077	T→A	7.3%	intergenic (+35/‑228)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,506,932	A→G	30.9%	intergenic (+44/‑73)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,936	G→A	29.8%	intergenic (+48/‑69)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,939	T→C	31.1%	intergenic (+51/‑66)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,506,943	C→T	29.8%	intergenic (+55/‑62)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,508,087	G→A	9.6%	intergenic (+17/+45)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,088	G→T	9.8%	intergenic (+18/+44)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,089	A→C	10.7%	intergenic (+19/+43)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,508,090	T→C	10.7%	intergenic (+20/+42)	sspB → / ← PP_1322	ClpXP protease specificity‑enhancing factor/lipoprotein
RA	1,509,433	T→G	6.8%	H110P (CAT→CCT)	PP_1324 ←	endonuclease
RA	1,521,032	T→A	5.7%	L83M (TTG→ATG) ‡	murD →	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
RA	1,521,033	T→A	5.4%	L83* (TTG→TAG) ‡	murD →	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
RA	1,521,039	C→G	5.4%	T85R (ACG→AGG)	murD →	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
RA	1,526,613	G→T	6.7%	C253F (TGC→TTC)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,622	T→A	8.8%	I256N (ATT→AAT)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,526,631	A→C	6.6%	E259A (GAA→GCA)	ddlB →	D‑alanine‑‑D‑alanine ligase B
RA	1,528,340	C→T	5.1%	G213G (GGC→GGT)	ftsA →	cell division protein FtsA
RA	1,534,921	G→A	6.9%	intergenic (+70/‑113)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,923	T→G	7.1%	intergenic (+72/‑111)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,925	C→T	7.1%	intergenic (+74/‑109)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,931	T→C	8.5%	intergenic (+80/‑103)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,935	C→T	8.0%	intergenic (+84/‑99)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,940	A→G	8.2%	intergenic (+89/‑94)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,534,944	G→A	6.1%	intergenic (+93/‑90)	secA → / → argJ	protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
RA	1,544,052	G→T	5.9%	G272W (GGG→TGG)	mdfA →	multidrug MFS transporter
RA	1,544,531	C→A	23.8%	intergenic (+48/+66)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,534	G→C	21.3%	intergenic (+51/+63)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,536	C→G	22.7%	intergenic (+53/+61)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,541	C→G	22.1%	intergenic (+58/+56)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,543	G→C	22.7%	intergenic (+60/+54)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,546	T→G	21.1%	intergenic (+63/+51)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,547,946	C→A	7.1%	L71M (CTG→ATG) ‡	PP_1358 →	heme iron utilization protein
RA	1,547,947	T→G	7.1%	L71R (CTG→CGG) ‡	PP_1358 →	heme iron utilization protein
RA	1,550,520	C→A	5.3%	A293D (GCT→GAT)	groL →	chaperonin GroEL
RA	1,551,324	G→T	9.2%	intergenic (+41/+85)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,551,327	A→C	8.6%	intergenic (+44/+82)	groL → / ← pykA	chaperonin GroEL/pyruvate kinase II
RA	1,553,252	A→C	6.2%	E84A (GAG→GCG)	PP_1363 →	hypothetical protein
RA	1,553,255	G→T	6.3%	R85L (CGC→CTC)	PP_1363 →	hypothetical protein
RA	1,554,138	G→A	6.8%	A56A (GCG→GCA)	sbcB →	exodeoxyribonuclease I
RA	1,557,402	C→G	9.3%	G271G (GGG→GGC)	PP_1368 ←	glycosyltransferase domain‑containing protein
RA	1,557,407	C→G	8.3%	A270P (GCC→CCC)	PP_1368 ←	glycosyltransferase domain‑containing protein
RA	1,563,869	G→T	6.2%	intergenic (+93/+29)	PP_1372 → / ← pitB	hypothetical protein/phosphate transporter
RA	1,563,870	A→C	6.2%	intergenic (+94/+28)	PP_1372 → / ← pitB	hypothetical protein/phosphate transporter
RA	1,564,973	A→T	5.6%	L133Q (CTG→CAG)	pitB ←	phosphate transporter
RA	1,576,798	G→C	5.9%	intergenic (‑276/+37)	galP‑II ← / ← ttgC	porin‑like protein/efflux pump outer membrane protein TtgC
RA	1,576,799	A→T	5.3%	intergenic (‑277/+36)	galP‑II ← / ← ttgC	porin‑like protein/efflux pump outer membrane protein TtgC
RA	1,576,803	G→C	5.2%	intergenic (‑281/+32)	galP‑II ← / ← ttgC	porin‑like protein/efflux pump outer membrane protein TtgC
RA	1,580,647	A→G	5.3%	D264D (GAT→GAC)	ttgB ←	efflux pump membrane protein TtgB
RA	1,582,815	C→A	9.1%	intergenic (‑219/‑39)	ttgA ← / → ttgR	efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
RA	1,582,822	T→A	9.2%	intergenic (‑226/‑32)	ttgA ← / → ttgR	efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
RA	1,582,829	T→G	8.8%	intergenic (‑233/‑25)	ttgA ← / → ttgR	efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
RA	1,588,469	C→G	6.1%	A224A (GCG→GCC)	PP_1393 ←	transcriptional regulator
RA	1,592,007	G→C	5.6%	intergenic (‑72/‑131)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,592,024	C→A	15.8%	intergenic (‑89/‑114)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,592,029	T→G	14.6%	intergenic (‑94/‑109)	PP_1395 ← / → PP_1396	AraC family transcriptional regulator/hypothetical protein
RA	1,593,400	A→C	9.5%	intergenic (‑80/+40)	PP_1398 ← / ← PP_1399	hypothetical protein/hypothetical protein
RA	1,606,667	G→T	5.9%	intergenic (‑91/+21)	PP_t64 ← / ← PP_1408	tRNA‑Gly/(R)‑3‑hydroxydecanoyl‑ACP:CoA transacylase
RA	1,611,149	A→T	5.6%	V324E (GTG→GAG)	PP_1412 ←	3‑hydroxyisobutyryl‑CoA hydrolase
RA	1,622,230	G→A	5.6%	E368K (GAG→AAG) ‡	PP_1421 →	sensor histidine kinase TctE
RA	1,622,232	G→C	6.2%	E368D (GAG→GAC) ‡	PP_1421 →	sensor histidine kinase TctE
RA	1,622,234	T→C	6.2%	L369S (TTG→TCG)	PP_1421 →	sensor histidine kinase TctE
RA	1,625,249	G→T	14.6%	intergenic (+30/+27)	PP_1425 → / ← nadB	hypothetical protein/L‑aspartate oxidase
RA	1,625,250	A→C	13.9%	intergenic (+31/+26)	PP_1425 → / ← nadB	hypothetical protein/L‑aspartate oxidase
RA	1,632,135	C→T	5.2%	P283S (CCT→TCT)	lepA →	elongation factor 4
RA	1,637,341	T→C	5.9%	intergenic (+8/+58)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,349	A→G	7.9%	intergenic (+16/+50)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,351	C→T	8.7%	intergenic (+18/+48)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,357	T→C	18.8%	intergenic (+24/+42)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,367	A→T	23.5%	intergenic (+34/+32)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,368	A→T	23.5%	intergenic (+35/+31)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,378	G→A	18.1%	intergenic (+45/+21)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,384	A→G	12.8%	intergenic (+51/+15)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,386	C→T	9.2%	intergenic (+53/+13)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,642,306	G→A	5.9%	intergenic (‑92/+60)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,313	G→C	6.0%	intergenic (‑99/+53)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,334	T→C	5.2%	intergenic (‑120/+32)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,647,969	G→A	44.6%	Y265Y (TAC→TAT)	oprB‑II ←	carbohydrate‑selective porin
RA	1,661,519	C→A	8.4%	A50D (GCC→GAC)	PP_1456 →	membrane protein
RA	1,661,522	T→A	8.6%	L51Q (CTG→CAG)	PP_1456 →	membrane protein
RA	1,661,525	T→G	8.5%	V52G (GTC→GGC)	PP_1456 →	membrane protein
RA	1,663,117	A→T	5.0%	intergenic (+21/+17)	purT → / ← yhjE	phosphoribosylglycinamide formyltransferase/metabolite transport protein YhjE
RA	1,663,118	A→T	5.1%	intergenic (+22/+16)	purT → / ← yhjE	phosphoribosylglycinamide formyltransferase/metabolite transport protein YhjE
RA	1,667,944	A→G	5.0%	S302G (AGC→GGC)	ffh →	signal recognition particle GTPase subunit
RA	1,667,950	A→C	5.2%	I304L (ATC→CTC)	ffh →	signal recognition particle GTPase subunit
RA	1,667,955	G→T	5.5%	E305D (GAG→GAT)	ffh →	signal recognition particle GTPase subunit
RA	1,667,961	C→T	5.4%	A307A (GCC→GCT)	ffh →	signal recognition particle GTPase subunit
RA	1,668,470	G→A	5.3%	intergenic (+53/‑129)	ffh → / → rpsP	signal recognition particle GTPase subunit/30S ribosomal protein S16
RA	1,668,471	T→C	5.4%	intergenic (+54/‑128)	ffh → / → rpsP	signal recognition particle GTPase subunit/30S ribosomal protein S16
RA	1,687,564	G→C	5.3%	I27M (ATC→ATG)	ydcV ←	polyamine ABC transporter permease
RA	1,690,454	G→A	6.2%	T140M (ACG→ATG) ‡	ydcS ←	polyamine ABC transporter, periplasmic polyamine‑binding protein
RA	1,690,455	T→C	7.0%	T140A (ACG→GCG) ‡	ydcS ←	polyamine ABC transporter, periplasmic polyamine‑binding protein
RA	1,691,706	C→G	5.7%	A204A (GCC→GCG)	PP_1487 →	hypothetical protein
RA	1,691,707	C→G	5.8%	R205G (CGC→GGC)	PP_1487 →	hypothetical protein
RA	1,691,814	T→C	10.6%	intergenic (+39/‑132)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,815	C→G	10.5%	intergenic (+40/‑131)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,825	C→A	12.9%	intergenic (+50/‑121)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,828	T→G	13.7%	intergenic (+53/‑118)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,693,727	C→G	5.1%	P52A (CCT→GCT) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,693,728	C→G	5.0%	P52R (CCT→CGT) ‡	PP_1489 →	CheW domain‑containing protein
RA	1,698,414	G→A	6.8%	Q40Q (CAG→CAA)	cheBC →	chemotaxis response regulator protein‑glutamate methylesterase
RA	1,698,417	T→C	6.6%	R41R (CGT→CGC)	cheBC →	chemotaxis response regulator protein‑glutamate methylesterase
RA	1,703,290	A→G	10.4%	intergenic (+97/‑70)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,292	G→C	8.6%	intergenic (+99/‑68)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294	C→T	8.8%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,294:1	+T	27.6%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,321	G→A	6.2%	intergenic (+128/‑39)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,704,678	T→A	8.7%	M1M (TTG→ATG) †‡	PP_1499 →	hypothetical protein
RA	1,704,679	T→A	10.0%	M1* (TTG→TAG) †‡	PP_1499 →	hypothetical protein
RA	1,712,122	A→T	8.5%	intergenic (+71/‑187)	ppc → / → adk	phosphoenolpyruvate carboxylase/adenylate kinase
RA	1,712,993	T→A	5.2%	intergenic (+34/‑106)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,712,994	T→A	5.3%	intergenic (+35/‑105)	adk → / → tsaB	adenylate kinase/endopeptidase
RA	1,725,887	A→C	5.3%	L773L (CTT→CTG)	plsB ←	glycerol‑3‑phosphate acyltransferase
RA	1,750,451	A→C	6.2%	Q29P (CAA→CCA)	PP_1550 →	Cro/CI family transcriptional regulator
RA	1,750,454	G→T	6.3%	W30L (TGG→TTG)	PP_1550 →	Cro/CI family transcriptional regulator
RA	1,777,566	C→G	7.8%	intergenic (+258/+34)	PP_5476 → / ← PP_1585	hypothetical protein/antidote protein
RA	1,777,567	C→G	7.8%	intergenic (+259/+33)	PP_5476 → / ← PP_1585	hypothetical protein/antidote protein
RA	1,780,128	T→A	13.2%	intergenic (+45/+61)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,151	T→A	16.7%	intergenic (+68/+38)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,780,171	T→C	12.3%	intergenic (+88/+18)	PP_1587 → / ← dapC	NhaP‑type Na+(K+)/H+ antiporter/N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,786,064	T→A	12.0%	intergenic (+38/‑148)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,786,065	T→A	11.1%	intergenic (+39/‑147)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,786,066	T→A	10.9%	intergenic (+40/‑146)	rpsB → / → tsf	30S ribosomal protein S2/elongation factor Ts
RA	1,797,384	Δ1 bp	11.8%	coding (43/777 nt)	lpxA →	acyl‑[acyl‑carrier‑protein]‑‑UDP‑N‑ acetylglucosamine O‑acyltransferase
RA	1,797,387:1	+T	12.7%	coding (46/777 nt)	lpxA →	acyl‑[acyl‑carrier‑protein]‑‑UDP‑N‑ acetylglucosamine O‑acyltransferase
RA	1,798,202	C→G	6.3%	A28G (GCG→GGG)	lpxB →	lipid‑A‑disaccharide synthase
RA	1,798,204:1	+C	6.3%	coding (85/1128 nt)	lpxB →	lipid‑A‑disaccharide synthase
RA	1,810,377	T→G	10.1%	intergenic (+96/‑73)	eno → / → ftsB	enolase/cell division protein
RA	1,810,378	C→A	9.5%	intergenic (+97/‑72)	eno → / → ftsB	enolase/cell division protein
RA	1,811,676	T→A	7.1%	T262S (ACG→TCG)	PP_1615 ←	LysR family transcriptional regulator
RA	1,811,679	T→A	7.2%	N261Y (AAT→TAT)	PP_1615 ←	LysR family transcriptional regulator
RA	1,822,230	G→T	5.6%	intergenic (+30/+28)	PP_mr22 → / ← fdxA	PrrB_RsmZ ncRNA/ferredoxin 1
RA	1,822,231	A→T	5.6%	intergenic (+31/+27)	PP_mr22 → / ← fdxA	PrrB_RsmZ ncRNA/ferredoxin 1
RA	1,822,232	A→C	5.5%	intergenic (+32/+26)	PP_mr22 → / ← fdxA	PrrB_RsmZ ncRNA/ferredoxin 1
RA	1,825,133	G→C	6.1%	R55G (CGC→GGC)	mutS ←	DNA mismatch repair protein MutS
RA	1,825,134	G→C	6.2%	A54A (GCC→GCG)	mutS ←	DNA mismatch repair protein MutS
RA	1,831,819	G→A	8.3%	R219Q (CGG→CAG)	yfiP →	hypothetical protein
RA	1,831,822	T→C	7.9%	L220P (CTG→CCG)	yfiP →	hypothetical protein
JC	1,844,516	Δ70 bp	100%	coding (251‑320/2754 nt)	gacS ←	sensor protein GacS
RA	1,848,918	C→T	9.1%	A106V (GCC→GTC)	cysM →	cysteine synthase B
RA	1,848,923	A→G	8.4%	T108A (ACG→GCG)	cysM →	cysteine synthase B
RA	1,850,353	G→A	6.2%	V284V (GTG→GTA)	rlmD →	23S rRNA (uracil(1939)‑C(5))‑methyltransferase RlmD
RA	1,852,004	C→T	88.4%	R350C (CGT→TGT)	relA →	ATP:GTP 3'‑pyrophosphotransferase
JC	1,852,158	Δ33 bp	12.1%	coding (1202‑1234/2241 nt)	relA →	ATP:GTP 3'‑pyrophosphotransferase
RA	1,859,150	C→G	6.8%	intergenic (+28/+73)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,156	A→T	6.6%	intergenic (+34/+67)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,162	C→G	6.2%	intergenic (+40/+61)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,569	A→C	7.8%	intergenic (‑119/+37)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,571	T→A	7.7%	intergenic (‑121/+35)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,573	G→T	7.7%	intergenic (‑123/+33)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,863,401:1	+A	5.1%	coding (1045/1068 nt)	PP_1666 →	hypothetical protein
RA	1,864,792	T→C	10.2%	A28A (GCT→GCC)	hda →	DnaA regulatory inactivator Hda
RA	1,864,795	G→A	9.5%	A29A (GCG→GCA)	hda →	DnaA regulatory inactivator Hda
RA	1,871,462	C→T	5.4%	Q232* (CAG→TAG)	cobC →	adenosylcobinamide‑phosphate synthase subunit beta
RA	1,872,674	T→C	6.0%	L306P (CTG→CCG)	cobQ →	adenosyl‑cobyric acid synthase
RA	1,872,680	A→C	6.0%	E308A (GAG→GCG)	cobQ →	adenosyl‑cobyric acid synthase
RA	1,873,937	G→C	6.7%	G69A (GGC→GCC)	cobU →	nicotinate‑nucleotide‑‑dimethylbenzimidazole phosphoribosyltransferase
RA	1,886,630	A→G	5.4%	I419V (ATC→GTC)	rmuC →	DNA recombination limiting inversions protein
RA	1,886,637	A→T	5.4%	D421V (GAC→GTC)	rmuC →	DNA recombination limiting inversions protein
RA	1,886,644	C→T	5.4%	D423D (GAC→GAT)	rmuC →	DNA recombination limiting inversions protein
RA	1,897,245	G→T	6.4%	intergenic (‑56/+88)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,249	T→A	6.5%	intergenic (‑60/+84)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,897,253	A→C	6.3%	intergenic (‑64/+80)	PP_mr24 ← / ← rdgC	mini‑ykkC regulatory region/recombination‑associated protein RdgC
RA	1,899,850	A→T	5.0%	K120M (AAG→ATG)	PP_1703 →	assimilatory nitrate reductase/sulfite reductase
RA	1,906,739	A→T	6.3%	intergenic (+37/+91)	nirD → / ← PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
RA	1,906,740	A→T	6.1%	intergenic (+38/+90)	nirD → / ← PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
RA	1,912,492	T→A	7.0%	D341V (GAC→GTC)	PP_1712 ←	hypothetical protein
RA	1,912,495	T→A	7.4%	D340V (GAC→GTC)	PP_1712 ←	hypothetical protein
RA	1,921,591	T→A	15.3%	intergenic (+24/+37)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,921,592	T→A	15.4%	intergenic (+25/+36)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,948,216	C→G	5.5%	R494R (CGG→CGC)	PP_1749 ←	acetyltransferase
RA	1,949,099	C→A	5.2%	C200F (TGC→TTC)	PP_1749 ←	acetyltransferase
RA	1,955,252	T→A	12.3%	intergenic (+39/‑154)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,955,253	T→A	12.3%	intergenic (+40/‑153)	PP_1752 → / → PP_1753	hypothetical protein/DMT superfamily permease
RA	1,967,284	A→G	5.9%	intergenic (+111/+8)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,969,512	G→C	6.7%	H17Q (CAC→CAG)	ubiG ←	ubiquinone biosynthesis O‑methyltransferase
RA	1,969,516	G→C	7.1%	A16G (GCC→GGC)	ubiG ←	ubiquinone biosynthesis O‑methyltransferase
RA	1,969,520	G→C	7.0%	L15V (CTG→GTG)	ubiG ←	ubiquinone biosynthesis O‑methyltransferase
RA	1,973,914	A→T	7.2%	intergenic (+28/‑120)	gyrA → / → serC	DNA gyrase subunit A/3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	1,973,915	A→T	7.3%	intergenic (+29/‑119)	gyrA → / → serC	DNA gyrase subunit A/3‑phosphoserine/phosphohydroxythreonine aminotransferase
RA	1,976,027:1	+G	6.3%	coding (916/1104 nt)	pheA →	bifunctional chorismate mutase/prephenate dehydratase
RA	1,976,030	Δ1 bp	5.8%	coding (919/1104 nt)	pheA →	bifunctional chorismate mutase/prephenate dehydratase
RA	1,978,751	C→G	11.3%	F45L (TTC→TTG)	cmk →	cytidylate kinase
RA	1,981,135	T→G	11.5%	intergenic (+31/‑269)	rpsA → / → ihfB	30S ribosomal protein S1/integration host factor subunit beta
RA	1,981,136	C→A	11.3%	intergenic (+32/‑268)	rpsA → / → ihfB	30S ribosomal protein S1/integration host factor subunit beta
RA	1,993,644:1	+T	8.8%	intergenic (+39/+59)	PP_1780 → / ← PP_1781	mannosyltransferase/acyltransferase
RA	1,993,647	Δ1 bp	8.8%	intergenic (+42/+56)	PP_1780 → / ← PP_1781	mannosyltransferase/acyltransferase
RA	1,998,711	A→T	7.0%	M271K (ATG→AAG)	rffG ←	dTDP‑glucose 4,6‑dehydratase
RA	1,998,717	T→A	10.8%	D269V (GAC→GTC)	rffG ←	dTDP‑glucose 4,6‑dehydratase
RA	1,998,723	A→T	10.7%	L267H (CTT→CAT)	rffG ←	dTDP‑glucose 4,6‑dehydratase
RA	2,004,613	G→A	8.1%	intergenic (+60/+90)	PP_1787 → / ← PP_1788	hypothetical protein/hypothetical protein
RA	2,004,616	T→C	8.1%	intergenic (+63/+87)	PP_1787 → / ← PP_1788	hypothetical protein/hypothetical protein
RA	2,010,502	T→A	6.4%	E325D (GAA→GAT) ‡	PP_1792 ←	group 2 family glycosyl transferase
RA	2,010,503	T→A	5.7%	E325V (GAA→GTA) ‡	PP_1792 ←	group 2 family glycosyl transferase
RA	2,019,126	C→A	6.7%	L120M (CTG→ATG) ‡	PP_1797 →	HlyD family secretion protein
RA	2,019,127	T→G	6.6%	L120R (CTG→CGG) ‡	PP_1797 →	HlyD family secretion protein
RA	2,038,754	T→C	5.4%	N257D (AAC→GAC)	rffE ←	UDP‑N‑acetylglucosamine‑2‑epimerase
RA	2,038,755	G→A	5.5%	V256V (GTC→GTT)	rffE ←	UDP‑N‑acetylglucosamine‑2‑epimerase
RA	2,039,746	A→C	12.8%	P33P (CCT→CCG) ‡	PP_1812 ←	hypothetical protein
RA	2,039,747	G→T	13.2%	P33H (CCT→CAT) ‡	PP_1812 ←	hypothetical protein
RA	2,049,346	G→T	5.8%	intergenic (‑32/+28)	PP_1822 ← / ← folEA‑I	hypothetical protein/GTP cyclohydrolase I
RA	2,051,108	T→A	6.9%	intergenic (‑63/+23)	PP_1825 ← / ← PP_1826	hypothetical protein/isochorismatase family hydrolase
RA	2,057,842	G→T	6.6%	intergenic (+15/+113)	PP_1832 → / ← PP_1833	oxidase/hypothetical protein
RA	2,063,271	C→G	11.3%	intergenic (+85/‑122)	PP_1838 → / → PP_1839	membrane protein/hypothetical protein
RA	2,068,194	A→T	5.3%	intergenic (‑96/+25)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,068,195	A→T	5.3%	intergenic (‑97/+24)	plsC ← / ← PP_1845	1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
RA	2,080,393	G→C	6.1%	A340A (GCG→GCC)	earP →	EF‑P arginine 32 rhamnosyl‑transferase
RA	2,085,635	C→T	5.4%	intergenic (+301/‑294)	PP_1864 → / → PP_1865	hypothetical protein/transposase
RA	2,087,404	C→G	5.0%	intergenic (+174/+744)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,744	G→C	9.9%	intergenic (+514/+404)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,087,745	G→C	9.2%	intergenic (+515/+403)	PP_1865 → / ← aroH	transposase/3‑deoxy‑7‑phosphoheptulonate synthase
RA	2,097,506	G→C	5.8%	S137T (AGT→ACT)	gpx →	hydroperoxy fatty acid reductase Gpx1
RA	2,100,001	T→G	6.6%	intergenic (‑69/‑136)	PP_1875 ← / → PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
RA	2,100,002	G→C	6.5%	intergenic (‑70/‑135)	PP_1875 ← / → PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
RA	2,104,740	A→G	6.7%	F63L (TTC→CTC)	PP_1879 ←	hypothetical protein
RA	2,104,741	C→T	6.8%	E62E (GAG→GAA)	PP_1879 ←	hypothetical protein
RA	2,117,220	C→T	5.8%	P285S (CCA→TCA)	PP_1884 →	hypothetical protein
RA	2,128,272	A→T	5.6%	A1200A (GCA→GCT)	PP_1887 →	hypothetical protein
RA	2,128,275	A→T	5.3%	Q1201H (CAA→CAT)	PP_1887 →	hypothetical protein
RA	2,128,276	A→T	5.7%	M1202L (ATG→TTG)	PP_1887 →	hypothetical protein
RA	2,128,279	A→T	6.0%	S1203C (AGC→TGC)	PP_1887 →	hypothetical protein
RA	2,134,314	A→C	5.0%	intergenic (‑37/+32)	PP_1892 ← / ← fadE	hypothetical protein/medium‑long chain acyl‑CoA dehydrogenase
RA	2,136,732	A→T	5.5%	L21Q (CTG→CAG)	fadE ←	medium‑long chain acyl‑CoA dehydrogenase
RA	2,141,427	T→A	10.4%	L374M (TTG→ATG) ‡	PP_1897 →	DNA internalization‑related competence protein ComEC/Rec2
RA	2,141,428	T→A	10.5%	L374* (TTG→TAG) ‡	PP_1897 →	DNA internalization‑related competence protein ComEC/Rec2
RA	2,147,347	A→T	7.1%	A1072A (GCT→GCA)	rne ←	ribonuclease E
RA	2,150,651	G→C	5.1%	noncoding (291/373 nt)	PP_mr28 ←	rne‑II regulatory region
RA	2,166,687	T→A	5.0%	intergenic (‑488/‑293)	PP_5483 ← / → PP_1921	hypothetical protein/hypothetical protein
RA	2,173,821	A→C	9.0%	A83A (GCT→GCG) ‡	PP_1926 ←	phosphotyrosine‑protein phosphatase
RA	2,173,822	G→T	9.6%	A83D (GCT→GAT) ‡	PP_1926 ←	phosphotyrosine‑protein phosphatase
RA	2,215,919	A→G	7.5%	intergenic (+690/‑254)	PP_1957 → / → PP_5493	Pdr/VanB family oxidoreductase/hypothetical protein
RA	2,216,174	T→A	6.8%	M1K (ATG→AAG) †	PP_5493 →	hypothetical protein
RA	2,216,180	C→G	7.4%	A3G (GCC→GGC)	PP_5493 →	hypothetical protein
RA	2,216,186	T→A	7.8%	L5H (CTT→CAT)	PP_5493 →	hypothetical protein
RA	2,239,868	C→A	5.7%	V18V (GTC→GTA)	gltX →	glutamate‑‑tRNA ligase
RA	2,239,873	C→G	5.6%	T20S (ACT→AGT)	gltX →	glutamate‑‑tRNA ligase
RA	2,239,878	T→G	5.3%	Y22D (TAC→GAC)	gltX →	glutamate‑‑tRNA ligase
RA	2,240,419	A→T	5.5%	D202V (GAC→GTC)	gltX →	glutamate‑‑tRNA ligase
RA	2,241,611	G→C	10.4%	noncoding (35/76 nt)	PP_t25 →	tRNA‑Ala
RA	2,241,886	G→C	6.3%	noncoding (35/76 nt)	PP_t27 →	tRNA‑Ala
RA	2,246,284	C→T	7.3%	intergenic (+30/+61)	ibpA → / ← PP_1983	small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
RA	2,246,285	A→G	7.3%	intergenic (+31/+60)	ibpA → / ← PP_1983	small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
RA	2,252,856	T→A	9.2%	intergenic (+69/‑50)	leuD → / → PP_1987	3‑isopropylmalate dehydratase small subunit/UbiE/COQ5 family methlytransferase
RA	2,252,857	T→A	9.2%	intergenic (+70/‑49)	leuD → / → PP_1987	3‑isopropylmalate dehydratase small subunit/UbiE/COQ5 family methlytransferase
RA	2,265,711	A→C	5.2%	E243A (GAG→GCG)	folC →	bifunctional folypolyglutamate synthase/dihydrofolate synthase
RA	2,265,714	T→A	5.2%	L244Q (CTG→CAG)	folC →	bifunctional folypolyglutamate synthase/dihydrofolate synthase
RA	2,265,717	G→T	5.2%	R245L (CGC→CTC)	folC →	bifunctional folypolyglutamate synthase/dihydrofolate synthase
RA	2,270,108	G→T	5.5%	D290Y (GAC→TAC)	metZ →	O‑succinylhomoserine sulfhydrylase
RA	2,273,105	C→G	11.9%	intergenic (+27/+264)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,109	A→T	11.1%	intergenic (+31/+260)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,273,113	C→G	10.1%	intergenic (+35/+256)	PP_2003 → / ← PP_2004	hypothetical protein/AraC family transcriptional regulator
RA	2,281,073	T→A	6.9%	intergenic (+88/‑149)	fadH → / → PP_2009	2,4‑dienoyl‑CoA reductase/1‑aminocyclopropane‑1‑carboxylate deaminase
RA	2,282,780	T→G	6.0%	intergenic (‑129/+100)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,813	T→G	36.2%	intergenic (‑162/+67)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,817	G→C	36.6%	intergenic (‑166/+63)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,818	G→C	36.7%	intergenic (‑167/+62)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,282,822	C→A	35.8%	intergenic (‑171/+58)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,284,836	G→A	7.5%	G16S (GGC→AGC)	PP_2013 →	hypothetical protein
RA	2,284,839	T→C	7.9%	C17R (TGT→CGT)	PP_2013 →	hypothetical protein
RA	2,290,063	A→T	5.1%	Q768L (CAG→CTG)	pepN →	aminopeptidase N
RA	2,298,647	G→A	5.2%	D506D (GAC→GAT)	sbcC ←	exonuclease subunit SbcC
RA	2,320,147	G→A	5.4%	V373I (GTC→ATC) ‡	PP_2040 →	MFS transporter
RA	2,320,148	T→C	5.5%	V373A (GTC→GCC) ‡	PP_2040 →	MFS transporter
RA	2,340,737	G→A	7.8%	intergenic (+28/‑87)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,347,661	G→C	8.6%	V307L (GTG→CTG) ‡	PP_2064 →	multidrug RND transporter membrane fusion protein
RA	2,347,663	G→C	8.3%	V307V (GTG→GTC) ‡	PP_2064 →	multidrug RND transporter membrane fusion protein
RA	2,347,665	G→C	8.4%	S308T (AGC→ACC)	PP_2064 →	multidrug RND transporter membrane fusion protein
RA	2,351,632	A→C	11.8%	L36R (CTG→CGG) ‡	PP_2066 ←	GntR family transcriptional regulator
RA	2,351,633	G→T	11.5%	L36M (CTG→ATG) ‡	PP_2066 ←	GntR family transcriptional regulator
RA	2,351,640	C→G	10.4%	V33V (GTG→GTC)	PP_2066 ←	GntR family transcriptional regulator
RA	2,356,194	Δ1 bp	5.2%	coding (671/711 nt)	PP_2070 ←	AraC family transcriptional regulator
RA	2,356,198:1	+C	5.3%	coding (667/711 nt)	PP_2070 ←	AraC family transcriptional regulator
RA	2,362,908	C→T	5.9%	V338I (GTC→ATC)	PP_2076 ←	hypothetical protein
RA	2,376,751	T→C	10.1%	intergenic (+69/‑136)	PP_2083 → / → PP_2084	lipase/ribonuclease activity regulator
RA	2,376,752	G→A	10.7%	intergenic (+70/‑135)	PP_2083 → / → PP_2084	lipase/ribonuclease activity regulator
RA	2,380,790	T→C	5.2%	A137A (GCT→GCC)	oprF →	porin F
RA	2,380,791	G→A	5.2%	G138S (GGC→AGC)	oprF →	porin F
RA	2,388,379	C→G	6.0%	intergenic (+73/+71)	pyrD → / ← rmf	dihydroorotate dehydrogenase/ribosome modulation factor
RA	2,389,187	G→A	6.0%	R2H (CGT→CAT)	rlmKL →	23S rRNA (guanine(2445)‑N(2))/(guanine(2069)‑N(7))‑ methyltransferase
RA	2,395,626	G→C	10.3%	intergenic (‑191/+52)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,395,628	A→T	9.9%	intergenic (‑193/+50)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,395,630	G→C	10.2%	intergenic (‑195/+48)	dacB ← / ← PP_2099	D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein
RA	2,404,130	G→C	13.3%	A238A (GCG→GCC)	PP_2106 →	ammonium transporter
RA	2,404,137	T→G	11.6%	S241A (TCG→GCG) ‡	PP_2106 →	ammonium transporter
RA	2,404,138	C→A	11.1%	S241* (TCG→TAG) ‡	PP_2106 →	ammonium transporter
RA	2,404,145	G→C	9.0%	M243I (ATG→ATC)	PP_2106 →	ammonium transporter
RA	2,418,700	C→T	11.2%	G564G (GGC→GGT)	PP_2119 →	ABC transporter permease/ATP‑binding protein
RA	2,418,701	A→G	10.3%	T565A (ACC→GCC)	PP_2119 →	ABC transporter permease/ATP‑binding protein
RA	2,420,641	Δ1 bp	9.1%	intergenic (+81/+26)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,420,645:1	+T	8.5%	intergenic (+85/+22)	ctpH → / ← PP_t62	methyl‑accepting chemotaxis protein CtpH/tRNA‑Pro
RA	2,426,684	G→C	5.3%	H85D (CAC→GAC)	PP_2127 ←	sensor histidine kinase
RA	2,426,689	G→C	5.3%	S83W (TCG→TGG)	PP_2127 ←	sensor histidine kinase
RA	2,426,694	Δ1 bp	5.4%	coding (243/942 nt)	PP_2127 ←	sensor histidine kinase
RA	2,433,193	A→C	5.1%	Q341P (CAG→CCG)	uup →	ABC transporter ATP‑binding protein
RA	2,434,178	T→C	7.0%	intergenic (+78/+30)	uup → / ← PP_2132	ABC transporter ATP‑binding protein/universal stress protein
RA	2,434,179	G→A	7.8%	intergenic (+79/+29)	uup → / ← PP_2132	ABC transporter ATP‑binding protein/universal stress protein
RA	2,444,458	A→C	9.0%	*159G (TGA→GGA)	sulA ←	cell division inhibitor SulA
RA	2,444,462	G→T	7.1%	L157L (CTC→CTA) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,463	A→C	7.0%	L157R (CTC→CGC) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,467	G→T	7.0%	R156S (CGC→AGC)	sulA ←	cell division inhibitor SulA
RA	2,445,401	G→C	5.3%	R52G (CGC→GGC)	lexA‑I ←	transcriptional repressor
RA	2,445,402	G→C	5.3%	A51A (GCC→GCG)	lexA‑I ←	transcriptional repressor
RA	2,445,724	G→A	11.4%	intergenic (‑170/‑46)	lexA‑I ← / → PP_2144	transcriptional repressor/TetR family transcriptional regulator
RA	2,445,727	T→C	13.0%	intergenic (‑173/‑43)	lexA‑I ← / → PP_2144	transcriptional repressor/TetR family transcriptional regulator
RA	2,447,094	Δ1 bp	10.1%	coding (440/1011 nt)	nagZ →	beta‑N‑acetylglucosaminidase
RA	2,447,098:1	+A	10.0%	coding (444/1011 nt)	nagZ →	beta‑N‑acetylglucosaminidase
RA	2,456,931	T→A	6.0%	intergenic (+139/‑42)	gapB → / → PP_2150	glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
RA	2,461,778	A→T	7.3%	Q245L (CAG→CTG)	lolC →	lipoprotein releasing system transmembrane protein LolC
RA	2,483,440	G→A	5.5%	R88H (CGC→CAC)	puuA‑I →	glutamate‑putrescine ligase
RA	2,483,443	T→A	5.4%	L89Q (CTG→CAG)	puuA‑I →	glutamate‑putrescine ligase
RA	2,483,446	T→C	5.3%	V90A (GTG→GCG)	puuA‑I →	glutamate‑putrescine ligase
RA	2,500,681	Δ1 bp	6.2%	coding (831/891 nt)	PP_2194 ←	LysR family transcriptional regulator
RA	2,500,688	T→C	7.1%	H275R (CAC→CGC) ‡	PP_2194 ←	LysR family transcriptional regulator
RA	2,500,689	G→A	7.2%	H275Y (CAC→TAC) ‡	PP_2194 ←	LysR family transcriptional regulator
RA	2,523,091:1	+C	5.2%	coding (4299/4446 nt)	PP_2212 →	leucine‑rich repeat‑containing protein
RA	2,523,097	Δ1 bp	5.3%	coding (4305/4446 nt)	PP_2212 →	leucine‑rich repeat‑containing protein
RA	2,531,153	A→C	7.2%	I117L (ATA→CTA)	PP_2219 →	hypothetical protein
RA	2,531,156	G→T	6.6%	G118C (GGC→TGC)	PP_2219 →	hypothetical protein
RA	2,546,866	T→C	9.0%	intergenic (+22/+18)	PP_2238 → / ← PP_5504	metallopeptidase/hypothetical protein
RA	2,546,869	G→A	8.6%	intergenic (+25/+15)	PP_2238 → / ← PP_5504	metallopeptidase/hypothetical protein
RA	2,560,505	T→A	8.6%	W142R (TGG→AGG) ‡	PP_2243 →	hypothetical protein
RA	2,560,507	G→C	8.5%	W142C (TGG→TGC) ‡	PP_2243 →	hypothetical protein
RA	2,560,509	T→A	8.6%	L143Q (CTG→CAG)	PP_2243 →	hypothetical protein
RA	2,567,124	Δ1 bp	6.1%	coding (847/879 nt)	PP_2250 ←	LysR family transcriptional regulator
RA	2,567,128:1	+C	6.0%	coding (843/879 nt)	PP_2250 ←	LysR family transcriptional regulator
RA	2,581,646	G→A	9.8%	S275S (TCG→TCA)	PP_2262 →	sugar ABC transporter permease
RA	2,603,120	A→C	5.6%	K12Q (AAG→CAG) ‡	PP_5513 →	hypothetical protein
RA	2,603,122	G→C	5.6%	K12N (AAG→AAC) ‡	PP_5513 →	hypothetical protein
RA	2,603,124	G→T	5.6%	W13L (TGG→TTG)	PP_5513 →	hypothetical protein
RA	2,633,500	T→G	16.4%	intergenic (+100/‑82)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,633,501	C→A	14.9%	intergenic (+101/‑81)	hupB → / → PP_2304	DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D
RA	2,638,137	T→G	5.4%	V67G (GTG→GGG)	PP_2308 →	acyl‑CoA thioesterase II
RA	2,638,140	C→A	5.4%	P68H (CCC→CAC)	PP_2308 →	acyl‑CoA thioesterase II
RA	2,650,131	C→A	7.5%	intergenic (+27/+107)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,650,134	T→A	7.0%	intergenic (+30/+104)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,650,137	T→G	7.4%	intergenic (+33/+101)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,650,203	A→T	10.1%	intergenic (+99/+35)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,650,204	A→T	10.6%	intergenic (+100/+34)	PP_2320 → / ← oprI	hypothetical protein/major outer membrane lipoprotein
RA	2,651,319	G→C	8.4%	intergenic (+41/+29)	PP_2323 → / ← aroF‑I	hypothetical protein/tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
RA	2,669,714	T→G	13.2%	intergenic (+38/+37)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,669,717	C→A	12.8%	intergenic (+41/+34)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,693,846	G→A	8.2%	A32T (GCC→ACC)	PP_2362 →	usher protein
RA	2,693,853	T→C	12.0%	V34A (GTC→GCC)	PP_2362 →	usher protein
RA	2,707,781	G→A	6.8%	R491C (CGC→TGC)	cysI ←	sulfite reductase hemoprotein subunit beta
RA	2,707,782	T→C	6.7%	A490A (GCA→GCG)	cysI ←	sulfite reductase hemoprotein subunit beta
RA	2,715,463	C→A	6.8%	A45A (GCC→GCA)	cti →	esterified fatty acid cis/trans isomerase
RA	2,715,464	T→G	6.7%	C46G (TGC→GGC)	cti →	esterified fatty acid cis/trans isomerase
RA	2,719,298	Δ1 bp	6.6%	coding (382/585 nt)	nfuA →	Fe/S biogenesis protein NfuA
RA	2,719,306:1	+T	6.2%	coding (390/585 nt)	nfuA →	Fe/S biogenesis protein NfuA
RA	2,732,661	A→T	5.9%	Q652L (CAG→CTG)	polB →	DNA polymerase II
RA	2,732,664	A→T	6.0%	Q653L (CAG→CTG)	polB →	DNA polymerase II
RA	2,733,953	G→T	5.2%	V270L (GTG→TTG)	PP_2394 →	leucine‑rich repeat‑containing protein
RA	2,742,960	C→T	5.8%	H5Y (CAC→TAC) ‡	PP_2397 →	EF hand domain‑containing protein
RA	2,742,961	A→G	5.4%	H5R (CAC→CGC) ‡	PP_2397 →	EF hand domain‑containing protein
RA	2,752,481	G→T	6.4%	S422I (AGC→ATC)	czcC‑II →	cobalt‑zinc‑cadmium resistance protein
RA	2,756,880	A→T	8.6%	intergenic (+16/+17)	czcA‑II → / ← PP_2411	cation efflux system protein/MFS transporter
RA	2,756,881	G→T	7.2%	intergenic (+17/+16)	czcA‑II → / ← PP_2411	cation efflux system protein/MFS transporter
RA	2,764,407	G→A	8.0%	A213V (GCC→GTC)	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,764,415	T→G	7.9%	A210A (GCA→GCC) ‡	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,764,416	G→A	8.1%	A210V (GCA→GTA) ‡	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,764,422	C→G	8.4%	G208A (GGC→GCC)	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,764,428	T→C	9.8%	D206G (GAC→GGC) ‡	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,764,429	C→A	9.8%	D206Y (GAC→TAC) ‡	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,764,437	T→C	7.3%	D203G (GAC→GGC)	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,778,768:1	+G	6.0%	coding (633/924 nt)	PP_2431 ←	LysR family transcriptional regulator
RA	2,778,773	Δ1 bp	5.7%	coding (628/924 nt)	PP_2431 ←	LysR family transcriptional regulator
RA	2,788,115	C→T	6.6%	P132L (CCG→CTG)	ahpF →	alkyl hydroperoxide reductase subunit F
RA	2,788,121	T→A	8.1%	V134D (GTC→GAC)	ahpF →	alkyl hydroperoxide reductase subunit F
RA	2,788,127	A→G	7.9%	Q136R (CAG→CGG)	ahpF →	alkyl hydroperoxide reductase subunit F
RA	2,790,100	T→A	7.2%	Q64L (CAG→CTG)	PP_2442 ←	DUF480 domain‑containing protein
RA	2,790,103	C→T	7.4%	G63D (GGC→GAC)	PP_2442 ←	DUF480 domain‑containing protein
RA	2,790,106	A→G	8.4%	V62A (GTC→GCC)	PP_2442 ←	DUF480 domain‑containing protein
RA	2,790,109	T→A	7.5%	Q61L (CAG→CTG)	PP_2442 ←	DUF480 domain‑containing protein
RA	2,793,795	G→T	11.9%	intergenic (+61/+66)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,798	Δ1 bp	9.1%	intergenic (+64/+63)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,800	T→A	9.0%	intergenic (+66/+61)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,801:1	+T	9.3%	intergenic (+67/+60)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,804	A→C	12.1%	intergenic (+70/+57)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,799,214	A→G	11.1%	intergenic (‑185/+31)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,220	C→T	12.0%	intergenic (‑191/+25)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,223	A→G	11.8%	intergenic (‑194/+22)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,799,229	C→T	10.8%	intergenic (‑200/+16)	PP_2452 ← / ← ansB	hypothetical protein/glutaminase‑asparaginase
RA	2,810,920	T→C	5.5%	G428G (GGT→GGC)	thrS →	threonine‑‑tRNA ligase
RA	2,812,818	C→T	7.4%	intergenic (+69/‑41)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,821	C→G	8.2%	intergenic (+72/‑38)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,812,824	A→G	7.3%	intergenic (+75/‑35)	rplT → / → pheS	50S ribosomal protein L20/phenylalanine‑‑tRNA ligase subunit alpha
RA	2,816,637	T→A	9.6%	I21N (ATT→AAT)	PP_2472 →	MerR family transcriptional regulator
RA	2,822,931	T→C	7.6%	V154A (GTG→GCG)	curA →	NADPH‑dependent curcumin/dihydrocurcumin reductase
RA	2,822,938	G→C	14.9%	A156A (GCG→GCC)	curA →	NADPH‑dependent curcumin/dihydrocurcumin reductase
RA	2,822,941	G→C	14.9%	A157A (GCG→GCC)	curA →	NADPH‑dependent curcumin/dihydrocurcumin reductase
RA	2,861,903	A→G	6.6%	V64A (GTG→GCG)	gllC ←	4‑carboxy‑4‑hydroxy‑2‑oxoadipic acid aldolase
RA	2,861,908	T→A	6.0%	V62V (GTA→GTT)	gllC ←	4‑carboxy‑4‑hydroxy‑2‑oxoadipic acid aldolase
RA	2,861,913	C→T	6.5%	A61T (GCG→ACG)	gllC ←	4‑carboxy‑4‑hydroxy‑2‑oxoadipic acid aldolase
RA	2,863,872	T→G	9.9%	S297A (TCG→GCG) ‡	gllR →	HTH‑type transcriptional regulator GalR
RA	2,863,873	C→A	9.3%	S297* (TCG→TAG) ‡	gllR →	HTH‑type transcriptional regulator GalR
RA	2,873,690	G→A	6.2%	V143M (GTG→ATG) ‡	cigR →	membrane protein
RA	2,873,691	T→C	6.2%	V143A (GTG→GCG) ‡	cigR →	membrane protein
RA	2,878,473	A→G	6.1%	R192R (CGT→CGC)	PP_2533 ←	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
RA	2,878,476	C→T	6.1%	S191S (TCG→TCA)	PP_2533 ←	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
RA	2,884,855	C→G	5.1%	P93A (CCG→GCG) ‡	PP_2540 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	2,884,856	C→G	5.1%	P93R (CCG→CGG) ‡	PP_2540 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	2,890,476	C→G	6.6%	E59D (GAG→GAC)	PP_2544 ←	hypothetical protein
RA	2,890,481	T→C	7.0%	R58G (AGG→GGG)	PP_2544 ←	hypothetical protein
RA	2,890,482	T→A	7.1%	P57P (CCA→CCT) ‡	PP_2544 ←	hypothetical protein
RA	2,890,483	G→A	6.8%	P57L (CCA→CTA) ‡	PP_2544 ←	hypothetical protein
RA	2,890,488	C→G	6.7%	G55G (GGG→GGC)	PP_2544 ←	hypothetical protein
RA	2,902,419	G→A	6.4%	L486L (TTG→TTA)	quiC →	3‑dehydroshikimate dehydratase
RA	2,903,349	T→G	5.5%	R90R (CGA→CGC)	PP_2555 ←	hypothetical protein
RA	2,909,327	T→C	5.3%	Q385R (CAG→CGG) ‡	aprDA ←	alkaline protease secretion ABC transporter ATP‑binding protein
RA	2,909,328	G→A	5.4%	Q385* (CAG→TAG) ‡	aprDA ←	alkaline protease secretion ABC transporter ATP‑binding protein
RA	2,926,933	C→T	5.5%	R53C (CGC→TGC)	PP_2565 →	UvrD/REP family helicase
RA	2,926,936	A→G	5.4%	T54A (ACT→GCT)	PP_2565 →	UvrD/REP family helicase
RA	2,934,724	T→G	6.4%	F133C (TTC→TGC) ‡	PP_2567 →	alpha/beta family hydrolase
RA	2,934,725	C→A	6.4%	F133L (TTC→TTA) ‡	PP_2567 →	alpha/beta family hydrolase
RA	2,935,901	C→G	6.3%	intergenic (+153/‑109)	PP_2568 → / → PP_2569	ring‑cleaving dioxygenase/MHS family metabolite MFS transporter
RA	2,941,370	T→G	6.3%	S187A (TCG→GCG)	PP_2574 →	LysR family transcriptional regulator
RA	2,941,374	T→A	5.9%	L188Q (CTG→CAG)	PP_2574 →	LysR family transcriptional regulator
RA	2,941,378	C→A	6.1%	R189R (CGC→CGA)	PP_2574 →	LysR family transcriptional regulator
RA	2,950,165	A→T	7.1%	L367Q (CTG→CAG)	oguA ←	8‑oxoguanine deaminase
RA	2,951,377	G→C	7.4%	intergenic (‑113/+48)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,384	A→C	8.4%	intergenic (‑120/+41)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,385	G→T	8.3%	intergenic (‑121/+40)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,392	G→C	7.4%	intergenic (‑128/+33)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,958,816	T→C	8.9%	intergenic (+39/+103)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,833	T→C	11.3%	intergenic (+56/+86)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,842	G→C	6.9%	intergenic (+65/+77)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,846	G→C	6.8%	intergenic (+69/+73)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,849	G→A	7.0%	intergenic (+72/+70)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,958,850	G→C	7.0%	intergenic (+73/+69)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	2,981,035	C→G	8.0%	G458A (GGC→GCC)	PP_2607 ←	hypothetical protein
RA	2,982,735	C→G	5.3%	G163R (GGT→CGT)	PP_2608 ←	shikimate dehydrogenase family protein
RA	3,001,858	C→G	5.3%	A180G (GCC→GGC)	PP_2625 →	hypothetical protein
RA	3,001,864	G→A	5.8%	R182Q (CGG→CAG)	PP_2625 →	hypothetical protein
RA	3,001,867	G→C	6.2%	G183A (GGC→GCC)	PP_2625 →	hypothetical protein
RA	3,001,870	T→C	6.9%	L184P (CTG→CCG)	PP_2625 →	hypothetical protein
RA	3,001,876	C→G	6.9%	A186G (GCC→GGC)	PP_2625 →	hypothetical protein
RA	3,006,511	T→G	7.6%	F1017V (TTC→GTC)	PP_2627 →	membrane protein
RA	3,006,516	G→T	5.9%	L1018L (CTG→CTT)	PP_2627 →	membrane protein
RA	3,006,517	A→C	5.4%	K1019Q (AAG→CAG)	PP_2627 →	membrane protein
RA	3,006,522	C→A	5.5%	D1020E (GAC→GAA)	PP_2627 →	membrane protein
RA	3,008,356	A→G	6.5%	M261T (ATG→ACG)	PP_2628 ←	ABC transporter ATP‑binding protein
RA	3,008,361	C→T	7.0%	S259S (TCG→TCA)	PP_2628 ←	ABC transporter ATP‑binding protein
RA	3,020,202	A→G	5.1%	T233A (ACC→GCC)	PP_2638 →	cellulose synthase operon protein C
RA	3,021,073	A→T	7.0%	Q523L (CAG→CTG)	PP_2638 →	cellulose synthase operon protein C
RA	3,024,351	T→A	6.1%	intergenic (+123/+31)	dapA‑II → / ← PP_2640	4‑hydroxy‑tetrahydrodipicolinate synthase/GNAT family acetyltransferase
RA	3,024,352	T→A	6.1%	intergenic (+124/+30)	dapA‑II → / ← PP_2640	4‑hydroxy‑tetrahydrodipicolinate synthase/GNAT family acetyltransferase
RA	3,024,353	T→A	6.1%	intergenic (+125/+29)	dapA‑II → / ← PP_2640	4‑hydroxy‑tetrahydrodipicolinate synthase/GNAT family acetyltransferase
RA	3,030,456	C→G	8.8%	intergenic (+413/‑281)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,460	G→C	7.4%	intergenic (+417/‑277)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,030,463	G→C	7.4%	intergenic (+420/‑274)	pcaY → / → mgtA	aromatic acid chemoreceptor/ATP‑dependent magnesium transporter
RA	3,033,991	T→C	5.7%	intergenic (+93/+14)	PP_2646 → / ← PP_2647	hypothetical protein/MFS transporter
RA	3,033,994	T→A	5.6%	intergenic (+96/+11)	PP_2646 → / ← PP_2647	hypothetical protein/MFS transporter
RA	3,033,997	G→A	5.8%	intergenic (+99/+8)	PP_2646 → / ← PP_2647	hypothetical protein/MFS transporter
RA	3,034,659	C→T	5.7%	P191P (CCG→CCA)	PP_2647 ←	MFS transporter
RA	3,034,664	C→G	5.8%	V190L (GTA→CTA)	PP_2647 ←	MFS transporter
RA	3,034,667	C→G	6.0%	G189R (GGC→CGC)	PP_2647 ←	MFS transporter
RA	3,034,672	A→G	8.1%	L187P (CTG→CCG)	PP_2647 ←	MFS transporter
RA	3,039,965	T→C	5.5%	L336P (CTC→CCC)	PP_2651 →	MFS transporter
RA	3,041,016	A→C	6.3%	Q192H (CAA→CAC)	PP_2652 →	hydratase/decarboxylase
RA	3,041,429	G→A	6.5%	S202S (AGC→AGT)	PP_2653 ←	Cro/CI family transcriptional regulator
RA	3,048,585	C→A	7.1%	S199S (TCC→TCA)	PP_2661 →	hypothetical protein
RA	3,048,586	T→G	7.1%	*200G (TGA→GGA)	PP_2661 →	hypothetical protein
RA	3,048,633	A→G	6.1%	intergenic (+45/‑251)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,647	G→T	9.7%	intergenic (+59/‑237)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,648	A→C	8.9%	intergenic (+60/‑236)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,048,662	C→T	6.0%	intergenic (+74/‑222)	PP_2661 → / → PP_2662	hypothetical protein/hypothetical protein
RA	3,060,067	C→G	11.1%	A10G (GCC→GGC)	exaE →	transcriptional regulator ExaE
RA	3,064,679	T→A	7.2%	S169T (TCG→ACG) ‡	PP_2676 →	substrate‑binding protein
RA	3,064,681	G→C	6.5%	S169S (TCG→TCC) ‡	PP_2676 →	substrate‑binding protein
RA	3,064,683	T→A	6.5%	V170E (GTG→GAG)	PP_2676 →	substrate‑binding protein
RA	3,066,366	G→C	5.8%	V153L (GTG→CTG)	PP_2678 →	hydrolase
RA	3,077,153	A→C	7.9%	I248S (ATC→AGC)	PP_2687 ←	hypothetical protein
RA	3,077,158	G→T	7.7%	A246A (GCC→GCA)	PP_2687 ←	hypothetical protein
RA	3,077,161	A→C	7.5%	H245Q (CAT→CAG)	PP_2687 ←	hypothetical protein
RA	3,081,166	C→T	5.2%	A464A (GCG→GCA)	PP_2691 ←	hypothetical protein
RA	3,089,083	Δ1 bp	13.8%	coding (113/510 nt)	PP_2697 ←	flavin reductase domain‑containing oxidoreductase
RA	3,089,094:1	+T	8.6%	coding (102/510 nt)	PP_2697 ←	flavin reductase domain‑containing oxidoreductase
RA	3,116,213	T→C	6.9%	L303P (CTG→CCG)	PP_2732 →	hypothetical protein
RA	3,137,695	C→T	12.4%	intergenic (+80/‑210)	PP_2753 → / → PP_2754	ABC transporter ATP‑binding protein/OprD family outer membrane porin
RA	3,137,696	A→G	11.8%	intergenic (+81/‑209)	PP_2753 → / → PP_2754	ABC transporter ATP‑binding protein/OprD family outer membrane porin
RA	3,141,536	Δ1 bp	5.9%	coding (410/972 nt)	PP_2757 →	sugar‑binding protein
RA	3,141,550:1	+A	5.0%	coding (424/972 nt)	PP_2757 →	sugar‑binding protein
RA	3,146,621	G→C	6.5%	intergenic (+14/+52)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,622	G→C	6.4%	intergenic (+15/+51)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,654	T→C	8.3%	intergenic (+47/+19)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,657	G→A	8.3%	intergenic (+50/+16)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,149,976	T→A	7.0%	L13M (TTG→ATG) ‡	PP_2766 →	long‑chain‑fatty acid‑‑CoA ligase‑like protein
RA	3,149,977	T→A	5.4%	L13* (TTG→TAG) ‡	PP_2766 →	long‑chain‑fatty acid‑‑CoA ligase‑like protein
RA	3,153,760	G→A	6.0%	P326P (CCG→CCA)	PP_2769 →	branched‑chain amino acid ABC transporter permease
RA	3,162,068	T→C	5.6%	L299P (CTG→CCG)	PP_2776 →	homocysteine S‑methyltransferase family protein
RA	3,174,174	T→A	8.2%	L101Q (CTG→CAG)	PP_2786 →	hypothetical protein
RA	3,189,321	G→C	6.3%	L458V (CTG→GTG)	PP_2799 ←	class III aminotransferase
RA	3,189,322	G→C	6.1%	H457Q (CAC→CAG)	PP_2799 ←	class III aminotransferase
RA	3,195,808	A→T	5.7%	L101Q (CTG→CAG)	dhaT ←	1,3‑propanediol dehydrogenase
RA	3,195,811	A→T	5.8%	L100Q (CTG→CAG)	dhaT ←	1,3‑propanediol dehydrogenase
RA	3,199,444	Δ1 bp	9.8%	coding (114/582 nt)	PP_2806 ←	TetR family transcriptional regulator
RA	3,199,450	C→G	10.5%	A36A (GCG→GCC)	PP_2806 ←	TetR family transcriptional regulator
RA	3,199,455:1	+A	9.6%	coding (103/582 nt)	PP_2806 ←	TetR family transcriptional regulator
RA	3,203,408	A→C	6.1%	Q39P (CAG→CCG) ‡	PP_2810 →	hypothetical protein
RA	3,203,409	G→T	6.1%	Q39H (CAG→CAT) ‡	PP_2810 →	hypothetical protein
RA	3,228,340	A→G	7.2%	H379R (CAC→CGC) ‡	PP_2828 →	hypothetical protein
RA	3,228,341	C→T	6.5%	H379H (CAC→CAT) ‡	PP_2828 →	hypothetical protein
RA	3,238,188	T→G	5.7%	L195R (CTG→CGG)	PP_2836 →	2‑keto‑3‑deoxyxylonate dehydratase
RA	3,238,190	T→A	5.7%	S196T (TCC→ACC) ‡	PP_2836 →	2‑keto‑3‑deoxyxylonate dehydratase
RA	3,238,192	C→A	5.8%	S196S (TCC→TCA) ‡	PP_2836 →	2‑keto‑3‑deoxyxylonate dehydratase
RA	3,250,804	T→A	6.6%	V49E (GTG→GAG)	ureJ →	urease accessory protein UreJ
RA	3,250,807	T→A	6.9%	L50H (CTC→CAC)	ureJ →	urease accessory protein UreJ
RA	3,252,594	T→A	7.2%	intergenic (+81/+162)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,252,595	T→A	8.0%	intergenic (+82/+161)	ureG → / ← PP_2851	urease accessory protein/hypothetical protein
RA	3,257,514	G→T	5.9%	T161N (ACC→AAC) ‡	PP_2854 ←	hypothetical protein
RA	3,257,515	T→A	5.8%	T161S (ACC→TCC) ‡	PP_2854 ←	hypothetical protein
RA	3,257,523	G→C	6.2%	A158G (GCC→GGC)	PP_2854 ←	hypothetical protein
RA	3,270,480:1	+A	5.2%	coding (1648/1953 nt)	PP_2869 ←	FMN‑binding oxidoreductase
RA	3,270,483	Δ1 bp	5.1%	coding (1645/1953 nt)	PP_2869 ←	FMN‑binding oxidoreductase
RA	3,270,486	Δ1 bp	5.1%	coding (1642/1953 nt)	PP_2869 ←	FMN‑binding oxidoreductase
RA	3,282,323	Δ1 bp	5.7%	coding (86/300 nt)	PP_2883 ←	hypothetical protein
RA	3,282,330	C→T	5.1%	E27K (GAG→AAG)	PP_2883 ←	hypothetical protein
RA	3,282,331	A→G	5.5%	L26L (CTT→CTC)	PP_2883 ←	hypothetical protein
RA	3,282,337:1	+C	5.7%	coding (72/300 nt)	PP_2883 ←	hypothetical protein
RA	3,296,544	T→C	7.4%	Q125R (CAG→CGG) ‡	PP_2898 ←	hypothetical protein
RA	3,296,545	G→A	7.3%	Q125* (CAG→TAG) ‡	PP_2898 ←	hypothetical protein
RA	3,300,198:1	+C	5.5%	intergenic (+53/+29)	pvdQ → / ← lpxH	acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase
RA	3,300,205	T→A	5.4%	intergenic (+60/+22)	pvdQ → / ← lpxH	acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase
RA	3,300,206	T→A	5.4%	intergenic (+61/+21)	pvdQ → / ← lpxH	acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase
RA	3,304,806	A→G	7.7%	intergenic (+16/+16)	cysS → / ← PP_2906	cysteine‑‑tRNA ligase/sensor histidine kinase
RA	3,304,807	C→G	7.9%	intergenic (+17/+15)	cysS → / ← PP_2906	cysteine‑‑tRNA ligase/sensor histidine kinase
RA	3,304,808	C→T	7.8%	intergenic (+18/+14)	cysS → / ← PP_2906	cysteine‑‑tRNA ligase/sensor histidine kinase
RA	3,305,111	T→C	5.8%	K368R (AAG→AGG)	PP_2906 ←	sensor histidine kinase
RA	3,313,868	C→A	11.7%	intergenic (+30/‑129)	hemB → / → proP	5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease
RA	3,313,871	T→G	11.3%	intergenic (+33/‑126)	hemB → / → proP	5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease
RA	3,315,630	G→T	6.0%	A191E (GCG→GAG)	PP_2915 ←	membrane protein
RA	3,316,953	G→C	5.7%	intergenic (‑113/+60)	ribC ← / ← treSA	riboflavin synthase/trehalose synthase A
RA	3,316,955	G→C	5.4%	intergenic (‑115/+58)	ribC ← / ← treSA	riboflavin synthase/trehalose synthase A
RA	3,316,957	G→C	5.9%	intergenic (‑117/+56)	ribC ← / ← treSA	riboflavin synthase/trehalose synthase A
RA	3,317,256	C→G	7.0%	P608P (CCG→CCC)	treSA ←	trehalose synthase A
RA	3,334,996:1	+T	6.0%	coding (609/1704 nt)	PP_2932 ←	amidase family protein
RA	3,335,001	Δ1 bp	5.9%	coding (604/1704 nt)	PP_2932 ←	amidase family protein
RA	3,364,797	G→T	6.9%	L158M (CTG→ATG)	PP_2961 ←	LysR family transcriptional regulator
RA	3,385,130	A→G	5.2%	L110L (CTT→CTC)	PP_2986 ←	oxidoreductase
RA	3,396,949	C→A	5.0%	L206M (CTG→ATG)	PP_3001 →	CAIB/BAIF family protein
RA	3,403,948	A→T	5.3%	D108V (GAC→GTC)	PP_3014 →	hypothetical protein
RA	3,416,904	C→A	8.3%	R127L (CGC→CTC)	PP_3029 ←	DNA cytosine methyltransferase family protein
RA	3,418,562	G→A	9.7%	intergenic (‑108/+51)	prtN ← / ← PP_3032	transcriptional regulator PrtN/DNA‑binding protein Roi‑like protein
RA	3,418,565	T→C	9.7%	intergenic (‑111/+48)	prtN ← / ← PP_3032	transcriptional regulator PrtN/DNA‑binding protein Roi‑like protein
RA	3,453,506	C→T	6.6%	intergenic (‑17/+96)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,453,523	A→G	6.1%	intergenic (‑34/+79)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,459,977	A→T	6.0%	L143Q (CTG→CAG)	PP_3075 ←	transcriptional regulator
RA	3,459,983	T→A	5.6%	D141V (GAC→GTC)	PP_3075 ←	transcriptional regulator
RA	3,459,989	A→T	5.3%	L139Q (CTG→CAG)	PP_3075 ←	transcriptional regulator
RA	3,466,884	Δ1 bp	7.8%	intergenic (‑16/+108)	PP_3081 ← / ← PP_5560	hypothetical protein/hypothetical protein
RA	3,466,886:1	+A	8.2%	intergenic (‑18/+106)	PP_3081 ← / ← PP_5560	hypothetical protein/hypothetical protein
RA	3,469,902	G→T	5.3%	E266* (GAG→TAG)	PP_3083 →	membrane protein
RA	3,473,762	A→T	5.0%	L130Q (CTG→CAG)	PP_3086 ←	RNA polymerase sigma‑70 factor
RA	3,489,941	T→C	5.7%	Q498R (CAG→CGG)	clpV ←	protein ClpV1
RA	3,491,271	A→C	6.3%	L55V (TTG→GTG)	clpV ←	protein ClpV1
RA	3,491,276	A→T	5.5%	L53Q (CTG→CAG)	clpV ←	protein ClpV1
RA	3,491,279	A→T	5.9%	L52Q (CTG→CAG)	clpV ←	protein ClpV1
RA	3,491,284	G→T	6.5%	H50Q (CAC→CAA)	clpV ←	protein ClpV1
RA	3,492,831	C→G	5.7%	G472A (GGC→GCC) ‡	PP_3097 ←	hypothetical protein
RA	3,492,832	C→G	6.3%	G472R (GGC→CGC) ‡	PP_3097 ←	hypothetical protein
RA	3,528,609	T→A	8.6%	L128Q (CTG→CAG)	dnaEB →	error‑prone DNA polymerase
RA	3,528,612	T→A	8.6%	L129Q (CTG→CAG)	dnaEB →	error‑prone DNA polymerase
RA	3,536,330	T→A	8.0%	intergenic (+1/‑76)	PP_3124 → / → PP_3125	short chain fatty acid transporter/Cro/CI family transcriptional regulator
RA	3,541,345:1	+T	6.6%	coding (415/807 nt)	PP_3128 →	exopolysaccharide biosynthesis/transport protein
RA	3,541,352	Δ1 bp	7.4%	coding (422/807 nt)	PP_3128 →	exopolysaccharide biosynthesis/transport protein
RA	3,542,361	A→G	7.2%	Y135Y (TAT→TAC)	galE ←	UDP‑glucose 4‑epimerase
RA	3,542,364	C→T	7.0%	P134P (CCG→CCA)	galE ←	UDP‑glucose 4‑epimerase
RA	3,551,117	C→T	7.2%	Q76* (CAG→TAG) ‡	PP_3135 →	glycosyl transferase
RA	3,551,118	A→G	7.0%	Q76R (CAG→CGG) ‡	PP_3135 →	glycosyl transferase
RA	3,554,502	G→C	9.6%	L25L (CTG→CTC)	PP_3139 →	group 1 family glycosyl transferase
RA	3,554,503	G→C	9.4%	E26Q (GAG→CAG)	PP_3139 →	group 1 family glycosyl transferase
RA	3,571,717	Δ1 bp	7.4%	coding (703/867 nt)	yneJ →	LysR family DNA‑binding transcriptional regulator
RA	3,571,720:1	+G	7.5%	coding (706/867 nt)	yneJ →	LysR family DNA‑binding transcriptional regulator
RA	3,590,368	G→C	10.1%	R282R (CGG→CGC)	nicP‑I →	porin‑like protein
RA	3,590,373	G→C	9.4%	G284A (GGC→GCC)	nicP‑I →	porin‑like protein
RA	3,610,309:1	+C	7.0%	intergenic (‑34/+22)	PP_3183 ← / ← mcoA	SCO1/SenC family protein/Mn(II) copper oxidase A
RA	3,610,313	Δ1 bp	7.1%	intergenic (‑38/+18)	PP_3183 ← / ← mcoA	SCO1/SenC family protein/Mn(II) copper oxidase A
RA	3,612,797	G→A	5.0%	P310P (CCC→CCT)	mcoA ←	Mn(II) copper oxidase A
RA	3,628,125	C→G	7.4%	intergenic (+11/‑129)	PP_3198 → / → PP_3199	2Fe‑2S ferredoxin/monooxygenase
RA	3,633,829	C→G	6.7%	P62A (CCG→GCG)	PP_3202 →	transporter
RA	3,633,834	C→G	5.6%	R63R (CGC→CGG)	PP_3202 →	transporter
RA	3,638,699	T→G	6.8%	L218V (TTG→GTG)	PP_3205 →	fumarylacetoacetate hydrolase family protein
RA	3,638,703	C→A	6.1%	P219Q (CCG→CAG)	PP_3205 →	fumarylacetoacetate hydrolase family protein
RA	3,638,706	T→G	6.3%	L220R (CTG→CGG)	PP_3205 →	fumarylacetoacetate hydrolase family protein
RA	3,638,710	C→A	5.3%	H221Q (CAC→CAA)	PP_3205 →	fumarylacetoacetate hydrolase family protein
RA	3,644,991	C→T	8.1%	intergenic (‑43/+23)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,644,994	A→G	8.0%	intergenic (‑46/+20)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,645,945	A→T	10.1%	L32Q (CTG→CAG)	PP_3212 ←	Rieske 2Fe‑2S family protein
RA	3,645,948	A→T	10.1%	L31Q (CTG→CAG)	PP_3212 ←	Rieske 2Fe‑2S family protein
RA	3,659,949	C→G	9.1%	intergenic (‑41/+34)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,951	G→A	9.1%	intergenic (‑43/+32)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,952	T→C	9.4%	intergenic (‑44/+31)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,954	C→G	9.4%	intergenic (‑46/+29)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,665,340	C→A	5.6%	L69M (CTG→ATG) ‡	PP_3229 →	aliphatic sulfonate‑binding protein
RA	3,665,341	T→G	5.1%	L69R (CTG→CGG) ‡	PP_3229 →	aliphatic sulfonate‑binding protein
RA	3,667,705	T→C	7.2%	D342G (GAT→GGT)	PP_3231 ←	hypothetical protein
RA	3,667,708	G→A	6.4%	A341V (GCC→GTC)	PP_3231 ←	hypothetical protein
RA	3,667,710	G→C	6.3%	A340A (GCC→GCG)	PP_3231 ←	hypothetical protein
RA	3,667,718	C→G	6.4%	V338L (GTG→CTG)	PP_3231 ←	hypothetical protein
RA	3,667,719	C→G	7.0%	Q337H (CAG→CAC)	PP_3231 ←	hypothetical protein
RA	3,676,800	A→T	5.7%	F30Y (TTC→TAC)	PP_3241 ←	hypothetical protein
RA	3,723,726	G→T	8.7%	intergenic (+13/+17)	PP_3288 → / ← PP_3289	universal stress protein family protein/acetyltransferase
RA	3,723,727	C→T	9.8%	intergenic (+14/+16)	PP_3288 → / ← PP_3289	universal stress protein family protein/acetyltransferase
RA	3,723,728	A→G	9.1%	intergenic (+15/+15)	PP_3288 → / ← PP_3289	universal stress protein family protein/acetyltransferase
RA	3,723,729	A→C	9.0%	intergenic (+16/+14)	PP_3288 → / ← PP_3289	universal stress protein family protein/acetyltransferase
RA	3,726,458	T→G	7.7%	F356L (TTT→TTG)	PP_3291 →	metallo‑beta‑lactamase family protein
RA	3,726,459	C→A	7.5%	Q357K (CAA→AAA)	PP_3291 →	metallo‑beta‑lactamase family protein
RA	3,730,641	C→T	5.7%	L142L (CTG→TTG)	PP_3297 →	hypothetical protein
RA	3,741,995	G→A	7.5%	intergenic (‑20/+393)	PP_3305 ← / ← PP_3306	TerC family membrane protein/hypothetical protein
RA	3,742,002	A→T	7.1%	intergenic (‑27/+386)	PP_3305 ← / ← PP_3306	TerC family membrane protein/hypothetical protein
RA	3,742,003	A→T	6.6%	intergenic (‑28/+385)	PP_3305 ← / ← PP_3306	TerC family membrane protein/hypothetical protein
RA	3,745,079	C→T	8.8%	Q108* (CAA→TAA) ‡	paoC →	aromatic aldehyde dehydrogenase molybdopterin‑binding subunit
RA	3,745,080	A→G	8.9%	Q108R (CAA→CGA) ‡	paoC →	aromatic aldehyde dehydrogenase molybdopterin‑binding subunit
RA	3,748,914	G→T	6.0%	intergenic (‑111/+84)	kefB‑II ← / ← PP_3312	glutathione‑regulated potassium/H+ antiporter/heat shock protein
RA	3,748,917	A→C	7.1%	intergenic (‑114/+81)	kefB‑II ← / ← PP_3312	glutathione‑regulated potassium/H+ antiporter/heat shock protein
RA	3,762,985	A→T	13.3%	N62I (AAC→ATC)	PP_3326 →	hypothetical protein
RA	3,762,990	A→T	14.0%	I64F (ATC→TTC)	PP_3326 →	hypothetical protein
RA	3,763,545	A→G	5.5%	intergenic (+22/+1653)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,547	G→C	5.4%	intergenic (+24/+1651)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,763,549	C→T	5.9%	intergenic (+26/+1649)	PP_3326 → / ← PP_3328	hypothetical protein/ring‑cleaving dioxygenase
RA	3,768,318	C→A	10.4%	P97Q (CCG→CAG)	PP_5600 →	hypothetical protein
RA	3,773,965	A→T	6.9%	T209S (ACA→TCA)	PP_5743 →	TonB‑dependent receptor protein
RA	3,786,374	A→G	7.1%	L293P (CTG→CCG)	mhpT ←	3‑(3‑hydroxy‑phenyl)propionate transporter MhpT
RA	3,786,381	C→T	6.9%	G291S (GGC→AGC)	mhpT ←	3‑(3‑hydroxy‑phenyl)propionate transporter MhpT
RA	3,787,761	C→A	8.2%	S306I (AGC→ATC) ‡	PP_3350 ←	hypothetical protein
RA	3,787,762	T→G	8.1%	S306R (AGC→CGC) ‡	PP_3350 ←	hypothetical protein
RA	3,789,805	G→C	5.4%	L289L (CTG→CTC)	atsA →	arylsulfatase
RA	3,793,935	A→T	9.3%	L211M (TTG→ATG)	PP_3355 ←	beta‑ketothiolase
RA	3,793,940	A→T	9.4%	I209N (ATT→AAT)	PP_3355 ←	beta‑ketothiolase
RA	3,796,468	G→A	12.6%	T10I (ACC→ATC) ‡	fcs ←	feruloyl‑CoA‑synthetase
RA	3,796,469	T→C	12.6%	T10A (ACC→GCC) ‡	fcs ←	feruloyl‑CoA‑synthetase
RA	3,797,544	A→T	5.8%	C165S (TGC→AGC)	vdh ←	vanillin dehydrogenase
RA	3,797,549	A→T	7.0%	L163Q (CTG→CAG)	vdh ←	vanillin dehydrogenase
RA	3,804,063	C→G	6.0%	intergenic (‑104/‑40)	PP_3361 ← / → PP_3362	aminotransferase/AsnC family transcriptional regulator
RA	3,804,064	C→G	5.8%	intergenic (‑105/‑39)	PP_3361 ← / → PP_3362	aminotransferase/AsnC family transcriptional regulator
RA	3,812,702	A→G	13.2%	D328G (GAC→GGC)	PP_3368 →	MFS transporter
RA	3,812,705	T→A	13.3%	I329N (ATT→AAT)	PP_3368 →	MFS transporter
RA	3,812,708	C→T	13.1%	A330V (GCC→GTC)	PP_3368 →	MFS transporter
RA	3,838,027	A→T	6.5%	R527W (AGG→TGG)	PP_3388 →	hypothetical protein
RA	3,838,550	G→C	5.6%	R701P (CGG→CCG)	PP_3388 →	hypothetical protein
RA	3,838,555	G→C	5.4%	G703R (GGC→CGC)	PP_3388 →	hypothetical protein
RA	3,851,001	A→C	7.6%	N147H (AAT→CAT)	PP_3398 →	curli fiber surface‑exposed nucleator CsgB
RA	3,851,004	G→T	8.3%	G148C (GGC→TGC)	PP_3398 →	curli fiber surface‑exposed nucleator CsgB
RA	3,853,809	C→T	8.1%	intergenic (+48/+34)	PP_3401 → / ← PP_3402	hypothetical protein/hypothetical protein
RA	3,853,815	T→C	8.1%	intergenic (+54/+28)	PP_3401 → / ← PP_3402	hypothetical protein/hypothetical protein
RA	3,853,816	G→A	8.5%	intergenic (+55/+27)	PP_3401 → / ← PP_3402	hypothetical protein/hypothetical protein
RA	3,853,822	A→G	9.3%	intergenic (+61/+21)	PP_3401 → / ← PP_3402	hypothetical protein/hypothetical protein
RA	3,869,902	T→G	7.1%	E354A (GAG→GCG) ‡	PP_3419 ←	sigma‑54 dependent transcriptional regulator/response regulator
RA	3,869,903	C→A	6.9%	E354* (GAG→TAG) ‡	PP_3419 ←	sigma‑54 dependent transcriptional regulator/response regulator
RA	3,871,650	G→C	5.9%	L259V (CTG→GTG)	PP_3420 ←	sensor histidine kinase
RA	3,871,651	G→C	5.9%	H258Q (CAC→CAG)	PP_3420 ←	sensor histidine kinase
RA	3,871,930	G→C	6.6%	R165R (CGC→CGG)	PP_3420 ←	sensor histidine kinase
RA	3,871,934	G→T	7.8%	S164* (TCG→TAG) ‡	PP_3420 ←	sensor histidine kinase
RA	3,871,935	A→C	6.7%	S164A (TCG→GCG) ‡	PP_3420 ←	sensor histidine kinase
RA	3,871,939	G→C	6.7%	F162L (TTC→TTG)	PP_3420 ←	sensor histidine kinase
RA	3,876,231	C→G	5.1%	L227V (CTG→GTG)	xcpS →	type II secretion pathway protein XcpS
RA	3,881,873	A→T	7.5%	Q163L (CAG→CTG)	oprN →	multidrug RND transporter outer membrane protein OprN
RA	3,882,857	A→G	13.3%	intergenic (+56/‑169)	oprN → / → PP_3428	multidrug RND transporter outer membrane protein OprN/TPR repeat‑containing protein
RA	3,882,868	C→T	12.6%	intergenic (+67/‑158)	oprN → / → PP_3428	multidrug RND transporter outer membrane protein OprN/TPR repeat‑containing protein
RA	3,893,526	G→A	7.4%	E282E (GAG→GAA)	rarD →	chloramphenicol‑sensitive protein
RA	3,893,528	G→C	6.8%	G283A (GGC→GCC)	rarD →	chloramphenicol‑sensitive protein
RA	3,893,530	T→C	6.6%	F284L (TTC→CTC)	rarD →	chloramphenicol‑sensitive protein
RA	3,895,859	T→C	8.8%	W156R (TGG→CGG)	PP_3438 →	membrane protein
RA	3,895,862	G→C	7.1%	A157P (GCC→CCC)	PP_3438 →	membrane protein
RA	3,895,865	T→A	7.1%	W158R (TGG→AGG)	PP_3438 →	membrane protein
RA	3,895,868	G→C	7.2%	A159P (GCC→CCC)	PP_3438 →	membrane protein
RA	3,895,871	G→A	7.2%	G160S (GGC→AGC)	PP_3438 →	membrane protein
RA	3,896,127	T→G	5.5%	Q221P (CAG→CCG)	PP_3439 ←	AraC family transcriptional regulator
RA	3,896,134	A→G	5.4%	L219L (TTG→CTG)	PP_3439 ←	AraC family transcriptional regulator
RA	3,896,135	C→T	5.2%	Q218Q (CAG→CAA)	PP_3439 ←	AraC family transcriptional regulator
RA	3,896,142	C→A	5.2%	R216L (CGG→CTG)	PP_3439 ←	AraC family transcriptional regulator
RA	3,912,174	A→G	6.7%	E159G (GAG→GGG)	PP_3452 →	GGDEF domain‑containing protein
RA	3,912,177	C→T	6.0%	P160L (CCC→CTC)	PP_3452 →	GGDEF domain‑containing protein
RA	3,914,733	C→G	11.3%	R33P (CGG→CCG)	PP_3454 ←	transcriptional regulator
RA	3,921,923	T→A	6.4%	intergenic (‑114/+26)	acs ← / ← peaD	acyl‑CoA synthetase/quinohemoprotein amine dehydrogenase subunit beta
RA	3,921,924	T→A	6.5%	intergenic (‑115/+25)	acs ← / ← peaD	acyl‑CoA synthetase/quinohemoprotein amine dehydrogenase subunit beta
RA	3,926,153	Δ1 bp	13.2%	coding (382/1629 nt)	peaA ←	quinohemoprotein amine dehydrogenase subunit alpha
RA	3,926,157:1	+T	13.5%	coding (378/1629 nt)	peaA ←	quinohemoprotein amine dehydrogenase subunit alpha
RA	3,930,295	A→T	5.4%	V286E (GTG→GAG)	PP_5603 ←	FAD dependent oxidoreductase
RA	3,934,031	A→T	9.3%	C476S (TGC→AGC)	PP_3467 ←	sigma‑54 dependent transcriptional regulator
RA	3,934,036	A→T	8.5%	L474Q (CTG→CAG)	PP_3467 ←	sigma‑54 dependent transcriptional regulator
RA	3,941,121:1	+A	6.8%	coding (123/531 nt)	PP_3475 ←	type II secretion system pseudopilin PulG‑like signal peptide protein
RA	3,941,126	Δ1 bp	6.6%	coding (118/531 nt)	PP_3475 ←	type II secretion system pseudopilin PulG‑like signal peptide protein
RA	3,954,383	A→T	5.9%	L62M (TTG→ATG)	PP_5606 ←	YVTN beta‑propeller repeat‑containing protein
RA	3,966,806	C→A	7.5%	L319M (CTG→ATG) ‡	ydcP →	peptidase
RA	3,966,807	T→G	6.8%	L319R (CTG→CGG) ‡	ydcP →	peptidase
RA	3,978,415	G→A	5.2%	R754C (CGC→TGC)	cobN ←	aerobic cobaltochelatase subunit CobN
RA	3,982,872	T→C	5.7%	L116P (CTG→CCG)	PP_3510 →	hypothetical protein
RA	3,982,879	G→T	7.6%	G118G (GGG→GGT)	PP_3510 →	hypothetical protein
RA	3,982,882	T→A	7.5%	H119Q (CAT→CAA)	PP_3510 →	hypothetical protein
RA	3,982,885	A→C	8.1%	*120C (TGA→TGC)	PP_3510 →	hypothetical protein
RA	3,989,552	C→G	5.1%	P676A (CCC→GCC)	oplA →	5‑oxoprolinase A
RA	3,989,557	C→G	5.0%	G677G (GGC→GGG)	oplA →	5‑oxoprolinase A
RA	3,990,887	G→T	5.6%	Q262K (CAA→AAA)	PP_3517 ←	hypothetical protein
RA	3,996,941	G→T	5.3%	P89H (CCT→CAT)	PP_3525 ←	hypothetical protein
RA	3,999,748	A→C	5.0%	E130A (GAG→GCG)	PP_3528 →	ABC transporter substrate‑binding protein
RA	4,015,994	A→T	5.8%	S436C (AGC→TGC)	PP_3543 →	iron‑sulfur cluster‑binding protein
RA	4,015,997	A→T	5.8%	S437C (AGC→TGC)	PP_3543 →	iron‑sulfur cluster‑binding protein
RA	4,021,409	C→G	5.6%	*314S (TGA→TCA)	PP_3547 ←	NAD(P)‑binding oxidoreductase
RA	4,039,899:1	+G	6.0%	coding (712/864 nt)	PP_3560 →	LysR family transcriptional regulator
RA	4,042,365	C→A	7.4%	L137I (CTC→ATC) ‡	PP_3563 →	hypothetical protein
RA	4,042,366	T→G	7.5%	L137R (CTC→CGC) ‡	PP_3563 →	hypothetical protein
RA	4,049,645	A→T	7.1%	K718* (AAG→TAG) ‡	quiA →	quinate dehydrogenase
RA	4,049,646	A→T	7.0%	K718M (AAG→ATG) ‡	quiA →	quinate dehydrogenase
RA	4,049,936	A→T	6.3%	intergenic (+25/‑76)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,937	A→T	6.3%	intergenic (+26/‑75)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,951	A→G	28.2%	intergenic (+40/‑61)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,954	C→G	27.0%	intergenic (+43/‑58)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,957	C→T	26.1%	intergenic (+46/‑55)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,053,520	A→T	7.1%	Q17L (CAG→CTG)	PP_3573 →	monooxygenase
RA	4,072,512	G→C	5.9%	A332G (GCG→GGG)	mdtA ←	multidrug transporter membrane fusion protein
RA	4,072,519	G→C	5.8%	P330A (CCG→GCG)	mdtA ←	multidrug transporter membrane fusion protein
RA	4,080,963	A→T	10.5%	intergenic (‑143/+20)	amaC ← / ← dpkA	D‑lysine aminotransferase/delta 1‑piperideine‑2‑carboxylate reductase
RA	4,080,964	A→T	10.4%	intergenic (‑144/+19)	amaC ← / ← dpkA	D‑lysine aminotransferase/delta 1‑piperideine‑2‑carboxylate reductase
RA	4,125,345	A→T	6.6%	intergenic (+30/+51)	PP_3628 → / ← PP_3629	choline/carnitine/betaine transporter family protein/hypothetical protein
RA	4,125,894	A→G	6.2%	intergenic (‑19/+167)	PP_3629 ← / ← opdT‑II	hypothetical protein/tyrosine‑specific outer membrane porin D
RA	4,141,212	T→A	6.9%	L44Q (CTG→CAG)	PP_3645 →	L‑proline amide hydrolase
RA	4,142,814	G→A	5.7%	E301E (GAG→GAA)	PP_3646 →	aldehyde dehydrogenase family protein
RA	4,142,815	T→C	5.7%	F302L (TTC→CTC)	PP_3646 →	aldehyde dehydrogenase family protein
RA	4,150,078	A→T	5.8%	intergenic (+33/‑364)	PP_3654 → / → PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
RA	4,150,079	A→T	5.9%	intergenic (+34/‑363)	PP_3654 → / → PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
RA	4,160,705	G→C	8.9%	intergenic (+27/+94)	PP_3662 → / ← PP_3663	hypothetical protein/GGDEF domain‑containing protein
RA	4,160,706	G→C	8.9%	intergenic (+28/+93)	PP_3662 → / ← PP_3663	hypothetical protein/GGDEF domain‑containing protein
RA	4,162,143	T→C	10.0%	intergenic (‑43/+34)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,147	T→A	10.3%	intergenic (‑47/+30)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,148	T→A	10.3%	intergenic (‑48/+29)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,162,152	G→A	10.2%	intergenic (‑52/+25)	PP_3663 ← / ← pssA	GGDEF domain‑containing protein/CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase
RA	4,164,734	A→T	6.4%	intergenic (+40/+77)	PP_3665 → / ← PP_3666	AraC family transcriptional regulator/MHS family metabolite MFS transporter
RA	4,164,735	A→T	6.4%	intergenic (+41/+76)	PP_3665 → / ← PP_3666	AraC family transcriptional regulator/MHS family metabolite MFS transporter
RA	4,166,929:1	+C	5.7%	coding (591/1212 nt)	creA ←	creatinase
RA	4,166,934	Δ1 bp	5.5%	coding (586/1212 nt)	creA ←	creatinase
RA	4,170,224	T→G	8.7%	intergenic (‑288/‑99)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,170,226	A→T	8.9%	intergenic (‑290/‑97)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,170,227	A→T	8.7%	intergenic (‑291/‑96)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,170,229	C→A	8.5%	intergenic (‑293/‑94)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,171,851	T→A	6.1%	T106S (ACG→TCG)	PP_3670 ←	DMT superfamily permease
RA	4,171,856	T→A	5.2%	E104V (GAG→GTG)	PP_3670 ←	DMT superfamily permease
RA	4,188,015:1	+A	5.2%	intergenic (+76/‑134)	PP_3683 → / → PP_3684	hypothetical protein/hypothetical protein
RA	4,188,018	Δ1 bp	5.1%	intergenic (+79/‑131)	PP_3683 → / → PP_3684	hypothetical protein/hypothetical protein
RA	4,200,256	T→A	6.1%	R276* (AGA→TGA)	PP_3690 ←	hypothetical protein
RA	4,200,259	T→A	7.4%	N275Y (AAT→TAT)	PP_3690 ←	hypothetical protein
RA	4,201,754	A→T	5.9%	V2022V (GTT→GTA)	PP_3691 ←	DNA helicase‑related protein
RA	4,211,045:1	+T	5.1%	coding (76/285 nt)	PP_5621 ←	hypothetical protein
RA	4,211,049	A→G	5.4%	C24C (TGT→TGC)	PP_5621 ←	hypothetical protein
RA	4,221,231	G→T	11.0%	intergenic (+46/+216)	PP_3699 → / ← PP_3700	hypothetical protein/chromosome partitioning ATPase
RA	4,221,233	A→T	10.8%	intergenic (+48/+214)	PP_3699 → / ← PP_3700	hypothetical protein/chromosome partitioning ATPase
RA	4,221,235	A→C	10.9%	intergenic (+50/+212)	PP_3699 → / ← PP_3700	hypothetical protein/chromosome partitioning ATPase
RA	4,237,680	T→G	5.8%	E205A (GAG→GCG) ‡	catB ←	muconate cycloisomerase 1
RA	4,237,681	C→A	6.9%	E205* (GAG→TAG) ‡	catB ←	muconate cycloisomerase 1
RA	4,241,038	C→G	5.8%	M235I (ATG→ATC)	PP_3718 ←	aminotransferase
RA	4,241,041	G→C	5.6%	I234M (ATC→ATG)	PP_3718 ←	aminotransferase
RA	4,246,229	C→G	5.9%	M30I (ATG→ATC)	alr ←	alanine racemase
RA	4,246,232	C→G	5.8%	S29S (TCG→TCC)	alr ←	alanine racemase
RA	4,248,398	C→T	7.1%	R558H (CGC→CAC)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,402	T→G	7.0%	M557L (ATG→CTG)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,403	C→A	6.7%	Q556H (CAG→CAT)	PP_3724 ←	acyl‑CoA synthetase
RA	4,248,407	A→G	6.6%	V555A (GTG→GCG)	PP_3724 ←	acyl‑CoA synthetase
RA	4,260,675	C→G	5.4%	A711P (GCG→CCG)	PP_3734 ←	ABC transporter permease
RA	4,270,911	T→G	5.9%	I336S (ATC→AGC)	mrdA‑I →	transpeptidase
RA	4,271,128	G→A	6.8%	E408E (GAG→GAA)	mrdA‑I →	transpeptidase
RA	4,272,817	G→A	5.8%	V23I (GTC→ATC)	PP_3743 →	hypothetical protein
RA	4,272,822	T→C	6.0%	D24D (GAT→GAC)	PP_3743 →	hypothetical protein
RA	4,280,092	C→G	6.4%	P416P (CCC→CCG)	PP_3750 →	GntR family transcriptional regulator
RA	4,288,185	C→G	7.8%	R55P (CGG→CCG)	PP_3759 ←	CheB‑like methylesterase
RA	4,288,188	C→G	7.8%	R54P (CGG→CCG)	PP_3759 ←	CheB‑like methylesterase
RA	4,296,219	A→G	6.2%	intergenic (+94/‑131)	PP_3765 → / → gloA	H‑NS family protein MvaT/lactoylglutathione lyase
RA	4,301,115	C→T	5.1%	A79V (GCC→GTC)	PP_3774 →	hypothetical protein
RA	4,314,775	Δ1 bp	13.4%	coding (933/1209 nt)	aspC →	aminotransferase
RA	4,314,779:1	+T	13.0%	coding (937/1209 nt)	aspC →	aminotransferase
RA	4,316,066	A→C	14.5%	A35A (GCA→GCC)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,316,069	G→T	13.0%	A36A (GCG→GCT)	PP_3788 →	non‑ribosomal peptide synthetase
RA	4,338,437	T→A	7.9%	intergenic (+13/+129)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,447	T→C	8.1%	intergenic (+23/+119)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,448	G→A	9.4%	intergenic (+24/+118)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,458	T→A	6.8%	intergenic (+34/+108)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,537	A→T	12.3%	intergenic (+113/+29)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,338,538	A→T	12.4%	intergenic (+114/+28)	PP_3812 → / ← PP_5632	lipase/allo‑isoleucine metabolism protein
RA	4,348,162	T→G	5.6%	E173A (GAG→GCG)	PP_3820 ←	group II intron‑encoding maturase
RA	4,348,749	A→G	46.1%	intergenic (‑70/+404)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,353,340	C→G	15.0%	P141R (CCG→CGG)	yrpB →	2‑nitropropane dioxygenase
RA	4,375,486	C→A	8.1%	A32S (GCG→TCG)	PP_5637 ←	hypothetical protein
RA	4,375,488	A→T	8.3%	V31D (GTC→GAC)	PP_5637 ←	hypothetical protein
RA	4,375,490	T→G	8.3%	R30R (CGA→CGC)	PP_5637 ←	hypothetical protein
RA	4,382,865	G→A	5.4%	intergenic (‑32/+230)	PP_3857 ← / ← PP_3858	hypothetical protein/tail fiber protein
RA	4,382,866	T→C	6.5%	intergenic (‑33/+229)	PP_3857 ← / ← PP_3858	hypothetical protein/tail fiber protein
RA	4,399,610	T→G	9.2%	R108R (CGA→CGC) ‡	PP_3878 ←	minor capsid protein C
RA	4,399,611	C→A	8.5%	R108L (CGA→CTA) ‡	PP_3878 ←	minor capsid protein C
RA	4,415,076	T→C	6.0%	intergenic (+141/+27)	PP_5644 → / ← PP_3899	membrane protein/hicB family protein
RA	4,415,081	G→A	6.2%	intergenic (+146/+22)	PP_5644 → / ← PP_3899	membrane protein/hicB family protein
RA	4,425,183	G→C	5.5%	intergenic (‑197/‑603)	PP_5647 ← / → PP_3917	hypothetical protein/hypothetical protein
RA	4,425,185	G→C	5.6%	intergenic (‑199/‑601)	PP_5647 ← / → PP_3917	hypothetical protein/hypothetical protein
RA	4,425,187	G→C	6.1%	intergenic (‑201/‑599)	PP_5647 ← / → PP_3917	hypothetical protein/hypothetical protein
RA	4,438,253	A→T	6.0%	K457* (AAG→TAG) ‡	PP_3932 →	diguanylate cyclase
RA	4,438,254	A→T	5.5%	K457M (AAG→ATG) ‡	PP_3932 →	diguanylate cyclase
RA	4,442,672	C→G	7.5%	intergenic (‑98/+40)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,442,673	C→G	7.4%	intergenic (‑99/+39)	nicP‑II ← / ← nicT	porin‑like protein/metabolite transport protein NicT
RA	4,445,294	C→G	5.4%	G117A (GGG→GCG) ‡	nicE ←	maleate isomerase
RA	4,445,295	C→G	5.4%	G117R (GGG→CGG) ‡	nicE ←	maleate isomerase
RA	4,446,535	G→C	5.9%	Y358* (TAC→TAG)	nicC ←	6‑hydroxynicotinate 3‑monooxygenase
RA	4,446,538	G→C	6.0%	L357L (CTC→CTG)	nicC ←	6‑hydroxynicotinate 3‑monooxygenase
RA	4,450,173	C→G	9.8%	A68G (GCC→GGC)	nicA →	nicotinate dehydrogenase subunit A
RA	4,453,536	C→G	11.9%	G1032G (GGC→GGG)	nicB →	nicotinate dehydrogenase subunit B
RA	4,463,997	A→T	12.2%	*139C (TGA→TGT)	PP_3956 →	hypothetical protein
RA	4,464,000	G→C	12.2%	intergenic (+3/+25)	PP_3956 → / ← betT‑III	hypothetical protein/choline/carnitine/betaine transporter BetTC
RA	4,464,003	A→T	12.3%	intergenic (+6/+22)	PP_3956 → / ← betT‑III	hypothetical protein/choline/carnitine/betaine transporter BetTC
RA	4,471,732	T→A	6.7%	intergenic (‑499/‑395)	PP_3961 ← / → PP_3962	transporter/hypothetical protein
RA	4,479,221	G→C	6.7%	W176C (TGG→TGC)	ybdR →	Zn‑dependent oxidoreductase
RA	4,479,857	A→G	5.7%	P388P (CCA→CCG)	ybdR →	Zn‑dependent oxidoreductase
RA	4,479,863	T→A	5.5%	A390A (GCT→GCA)	ybdR →	Zn‑dependent oxidoreductase
RA	4,479,869	C→T	5.8%	P392P (CCC→CCT)	ybdR →	Zn‑dependent oxidoreductase
RA	4,501,341	A→T	6.5%	intergenic (‑236/+19)	PP_3989 ← / ← PP_t60	DNA‑cytosine methyltransferase/tRNA‑Ser
RA	4,501,344	A→T	6.5%	intergenic (‑239/+16)	PP_3989 ← / ← PP_t60	DNA‑cytosine methyltransferase/tRNA‑Ser
RA	4,503,833	C→T	12.7%	intergenic (+38/‑60)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,503,834	A→G	14.9%	intergenic (+39/‑59)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,506,989	T→A	8.1%	L214* (TTG→TAG)	gqr →	glutathionyl‑hydroquinone reductase
RA	4,506,992	T→A	7.7%	L215Q (CTA→CAA)	gqr →	glutathionyl‑hydroquinone reductase
RA	4,512,506	C→A	10.3%	G9V (GGT→GTT)	lolA ←	outer membrane lipoprotein carrier protein
RA	4,512,509	T→G	11.5%	N8T (AAC→ACC)	lolA ←	outer membrane lipoprotein carrier protein
RA	4,517,278	G→T	7.8%	intergenic (+71/+15)	infA → / ← clpA	translation initiation factor IF‑1/ATP‑dependent serine protease
RA	4,519,494	A→G	8.8%	F24L (TTC→CTC)	clpA ←	ATP‑dependent serine protease
RA	4,519,495	C→T	8.7%	E23E (GAG→GAA)	clpA ←	ATP‑dependent serine protease
RA	4,519,503	Δ1 bp	5.4%	coding (61/2271 nt)	clpA ←	ATP‑dependent serine protease
RA	4,519,505	T→G	5.8%	K20T (AAG→ACG)	clpA ←	ATP‑dependent serine protease
RA	4,528,397	T→A	14.6%	intergenic (+28/‑48)	purB → / → PP_4017	adenylosuccinate lyase/hypothetical protein
RA	4,530,069	T→A	9.9%	intergenic (+31/‑137)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,530,070	T→A	10.0%	intergenic (+32/‑136)	PP_4018 → / → topB	acetyltransferase/DNA topoisomerase III
RA	4,535,711	G→A	5.2%	intergenic (+194/‑621)	PP_4022 → / → PP_4024	hypothetical protein/transposase
RA	4,560,899	T→A	5.3%	I232F (ATC→TTC)	PP_4048 ←	hypothetical protein
RA	4,560,900	T→A	5.3%	E231D (GAA→GAT)	PP_4048 ←	hypothetical protein
RA	4,577,913	C→T	5.8%	intergenic (+78/+31)	PP_4057 → / ← glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
RA	4,577,914:1	+A	5.8%	intergenic (+79/+30)	PP_4057 → / ← glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
RA	4,577,923	A→G	6.2%	intergenic (+88/+21)	PP_4057 → / ← glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
RA	4,579,942	G→C	5.2%	S71R (AGC→AGG)	glgB ←	1,4‑alpha‑glucan branching enzyme
RA	4,580,643	C→A	6.0%	Q943H (CAG→CAT)	treSB ←	bifunctional trehalose synthase B/maltokinase
RA	4,580,648	T→G	5.4%	K942Q (AAG→CAG)	treSB ←	bifunctional trehalose synthase B/maltokinase
RA	4,586,124	G→A	8.7%	intergenic (+163/+54)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,586,126	T→G	8.6%	intergenic (+165/+52)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,586,128	C→T	8.9%	intergenic (+167/+50)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,599,336	G→C	6.8%	L173L (CTC→CTG)	PP_4071 ←	membrane protein
RA	4,599,342	C→A	6.6%	Q171H (CAG→CAT) ‡	PP_4071 ←	membrane protein
RA	4,599,343	T→G	6.7%	Q171P (CAG→CCG) ‡	PP_4071 ←	membrane protein
RA	4,599,349	G→C	8.9%	P169R (CCA→CGA)	PP_4071 ←	membrane protein
RA	4,599,353	G→T	8.6%	R168R (CGG→AGG)	PP_4071 ←	membrane protein
RA	4,599,354	G→A	8.7%	G167G (GGC→GGT)	PP_4071 ←	membrane protein
RA	4,604,250	C→G	7.8%	P12A (CCG→GCG) ‡	PP_4076 →	hypothetical protein
RA	4,604,251	C→G	7.8%	P12R (CCG→CGG) ‡	PP_4076 →	hypothetical protein
RA	4,632,641	G→C	6.0%	noncoding (35/76 nt)	PP_t59 ←	tRNA‑Gly
RA	4,653,236	G→T	6.2%	G11C (GGC→TGC)	PP_5659 →	hypothetical protein
RA	4,653,239	A→C	6.4%	K12Q (AAG→CAG)	PP_5659 →	hypothetical protein
RA	4,654,924	G→A	6.3%	intergenic (+30/‑228)	aceA → / → PP_4118	isocitrate lyase/membrane protein
RA	4,654,929	Δ1 bp	5.8%	intergenic (+35/‑223)	aceA → / → PP_4118	isocitrate lyase/membrane protein
RA	4,654,931	G→C	6.0%	intergenic (+37/‑221)	aceA → / → PP_4118	isocitrate lyase/membrane protein
RA	4,654,932:1	+C	5.9%	intergenic (+38/‑220)	aceA → / → PP_4118	isocitrate lyase/membrane protein
RA	4,654,937	T→C	6.8%	intergenic (+43/‑215)	aceA → / → PP_4118	isocitrate lyase/membrane protein
RA	4,666,350:1	+A	8.0%	coding (70/1854 nt)	nuoL →	NADH‑quinone oxidoreductase subunit L
RA	4,666,358	G→C	7.6%	S26S (TCG→TCC)	nuoL →	NADH‑quinone oxidoreductase subunit L
RA	4,672,979	C→A	8.7%	V26L (GTG→TTG)	PP_4136 ←	LuxR family transcriptional regulator
RA	4,672,980	T→G	8.8%	Q25H (CAA→CAC)	PP_4136 ←	LuxR family transcriptional regulator
RA	4,677,565	A→T	5.2%	L352Q (CTG→CAG)	ldcC ←	lysine decarboxylase
RA	4,705,459	T→A	20.3%	intergenic (‑151/+26)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,460	T→A	20.3%	intergenic (‑152/+25)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,470	A→G	15.0%	intergenic (‑162/+15)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,705,471	G→A	14.9%	intergenic (‑163/+14)	kdpF ← / ← PP_4162	potassium‑transporting ATPase subunit F/membrane protein
RA	4,730,172	T→C	5.9%	S440G (AGT→GGT)	lpdG ←	dihydrolipoyl dehydrogenase
RA	4,730,173	G→A	6.0%	T439T (ACC→ACT)	lpdG ←	dihydrolipoyl dehydrogenase
RA	4,731,726	T→C	6.5%	N361D (AAT→GAT)	sucB ←	2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
RA	4,731,727	G→A	5.2%	I360I (ATC→ATT)	sucB ←	2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit
RA	4,740,884	C→G	19.6%	intergenic (+75/+677)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,886	T→A	17.7%	intergenic (+77/+675)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,887	T→A	19.3%	intergenic (+78/+674)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,889	C→G	19.5%	intergenic (+80/+672)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,273:1	+C	76.9%	intergenic (+464/+288)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,274	A→C	23.0%	intergenic (+465/+287)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,275	A→G	77.2%	intergenic (+466/+286)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,276	C→G	15.0%	intergenic (+467/+285)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,277	C→T	85.0%	intergenic (+468/+284)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,279	C→T	9.5%	intergenic (+470/+282)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,280	C→T	88.7%	intergenic (+471/+281)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,283	C→G	100%	intergenic (+474/+278)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,285	2 bp→CT	100%	intergenic (+476/+275)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,298:1	+T	60.4%	intergenic (+489/+263)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,299	C→T	39.3%	intergenic (+490/+262)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,301	A→C	38.5%	intergenic (+492/+260)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,302	A→G	60.4%	intergenic (+493/+259)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,304	C→G	39.4%	intergenic (+495/+257)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,305	Δ1 bp	60.3%	intergenic (+496/+256)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,750,060	Δ1 bp	5.2%	intergenic (+36/+36)	PP_4203 → / ← mqsA	ubiquinone oxidoreductase electron transfer flavoprotein/type II toxin‑antitoxin MqsRA system antitoxin/DNA‑binding transcriptional repressor
RA	4,750,068:1	+A	5.1%	intergenic (+44/+28)	PP_4203 → / ← mqsA	ubiquinone oxidoreductase electron transfer flavoprotein/type II toxin‑antitoxin MqsRA system antitoxin/DNA‑binding transcriptional repressor
RA	4,750,068:2	+A	5.1%	intergenic (+44/+28)	PP_4203 → / ← mqsA	ubiquinone oxidoreductase electron transfer flavoprotein/type II toxin‑antitoxin MqsRA system antitoxin/DNA‑binding transcriptional repressor
RA	4,762,027	T→A	5.3%	V214D (GTC→GAC)	pvdN →	pyoverdine biosynthesis‑like protein
RA	4,767,863	C→T	5.0%	intergenic (+32/+37)	fpvA → / ← PP_4218	TonB‑dependent outer membrane ferripyoverdine receptor FpvA/lipase/esterase family protein
RA	4,767,864	A→G	5.0%	intergenic (+33/+36)	fpvA → / ← PP_4218	TonB‑dependent outer membrane ferripyoverdine receptor FpvA/lipase/esterase family protein
RA	4,768,094	T→A	10.2%	M255L (ATG→TTG)	PP_4218 ←	lipase/esterase family protein
RA	4,768,102	G→C	8.9%	P252R (CCT→CGT) ‡	PP_4218 ←	lipase/esterase family protein
RA	4,768,103	G→C	8.8%	P252A (CCT→GCT) ‡	PP_4218 ←	lipase/esterase family protein
RA	4,768,111	T→A	8.4%	N249I (AAC→ATC)	PP_4218 ←	lipase/esterase family protein
RA	4,774,299	C→T	9.2%	V1671V (GTG→GTA) ‡	pvdD ←	non‑ribosomal peptide synthetase
RA	4,774,300	A→G	9.2%	V1671A (GTG→GCG) ‡	pvdD ←	non‑ribosomal peptide synthetase
RA	4,776,469	A→T	6.4%	L948Q (CTG→CAG)	pvdD ←	non‑ribosomal peptide synthetase
RA	4,790,321	C→T	5.2%	Q1188Q (CAG→CAA)	pvdI ←	non‑ribosomal peptide synthetase
RA	4,794,021	A→G	8.3%	intergenic (‑137/+19)	pvdI ← / ← PP_4222	non‑ribosomal peptide synthetase/protein SyrP
RA	4,795,165	G→T	6.5%	F441L (TTC→TTA) ‡	pvdH ←	diaminobutyrate‑2‑oxoglutarate transaminase
RA	4,795,166	A→C	6.7%	F441C (TTC→TGC) ‡	pvdH ←	diaminobutyrate‑2‑oxoglutarate transaminase
RA	4,796,649	A→G	11.4%	intergenic (‑162/+56)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,657	C→T	12.5%	intergenic (‑170/+48)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,659	G→C	12.6%	intergenic (‑172/+46)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,662	G→C	12.3%	intergenic (‑175/+43)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,664	A→G	11.6%	intergenic (‑177/+41)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,672	C→T	13.0%	intergenic (‑185/+33)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,806,160	A→T	9.8%	S593T (TCG→ACG)	PP_4234 ←	bifunctional aldehyde oxidase/xanthine dehydrogenase
RA	4,806,161	A→T	9.8%	R592R (CGT→CGA)	PP_4234 ←	bifunctional aldehyde oxidase/xanthine dehydrogenase
RA	4,811,276	A→T	11.7%	D78V (GAC→GTC)	dsbG →	protein disulfide isomerase
RA	4,812,228	C→T	10.9%	intergenic (+103/‑290)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,812,229	A→T	11.4%	intergenic (+104/‑289)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,812,230	A→G	11.0%	intergenic (+105/‑288)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,824,196	A→G	6.4%	F2347L (TTC→CTC)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,824,197	C→T	6.1%	E2346E (GAG→GAA)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,824,317	G→C	5.7%	S2306R (AGC→AGG)	pvdL ←	non‑ribosomal peptide synthetase
RA	4,827,099	C→A	9.5%	S1379I (AGT→ATT) ‡	pvdL ←	non‑ribosomal peptide synthetase
RA	4,827,100	T→G	9.2%	S1379R (AGT→CGT) ‡	pvdL ←	non‑ribosomal peptide synthetase
RA	4,833,415	C→G	5.6%	G229R (GGG→CGG)	PP_4246 ←	substrate‑binding protein
RA	4,833,416	C→G	5.1%	P228P (CCG→CCC)	PP_4246 ←	substrate‑binding protein
RA	4,839,266	C→G	8.8%	intergenic (+43/‑137)	ccoP‑I → / → PP_4254	cbb3‑type cytochrome c oxidase subunit/hypothetical protein
RA	4,841,156	T→A	5.5%	L12Q (CTG→CAG)	ccoO‑II →	cbb3‑type cytochrome c oxidase subunit
RA	4,841,159	T→A	5.5%	L13Q (CTG→CAG)	ccoO‑II →	cbb3‑type cytochrome c oxidase subunit
RA	4,842,941	Δ1 bp	34.6%	intergenic (+40/‑257)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,842,949:1	+G	38.0%	intergenic (+48/‑249)	ccoP‑II → / → PP_4259	cbb3‑type cytochrome c oxidase subunit/iron‑sulfur cluster‑binding protein
RA	4,844,263	T→G	5.2%	F356V (TTC→GTC)	PP_4259 →	iron‑sulfur cluster‑binding protein
RA	4,855,056	A→C	5.2%	N30K (AAT→AAG)	dnaX ←	DNA polymerase III subunit gamma
RA	4,855,065	G→T	5.8%	A27A (GCC→GCA)	dnaX ←	DNA polymerase III subunit gamma
RA	4,862,654	G→T	5.1%	F1088L (TTC→TTA)	smc ←	chromosome partition protein Smc
RA	4,866,068	G→T	6.4%	R171R (CGC→CGA)	PP_4277 ←	GntR family transcriptional regulator
RA	4,866,075	T→A	7.4%	D169V (GAC→GTC)	PP_4277 ←	GntR family transcriptional regulator
RA	4,866,082	A→C	7.5%	S167A (TCG→GCG)	PP_4277 ←	GntR family transcriptional regulator
RA	4,881,249	T→A	7.1%	V96D (GTC→GAC)	uacT →	uric acid permease
RA	4,882,252:1	+A	6.2%	coding (1290/1356 nt)	uacT →	uric acid permease
RA	4,882,257	Δ1 bp	5.9%	coding (1295/1356 nt)	uacT →	uric acid permease
RA	4,886,180	G→C	7.7%	intergenic (+14/+109)	PP_4295 → / ← PP_4296	TetR family transcriptional regulator/hypothetical protein
RA	4,898,615	A→T	5.7%	L300* (TTA→TAA) ‡	PP_4307 ←	DMT superfamily permease
RA	4,898,616	A→T	5.7%	L300I (TTA→ATA) ‡	PP_4307 ←	DMT superfamily permease
RA	4,900,110	A→G	12.9%	intergenic (+26/‑472)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,114	G→A	12.4%	intergenic (+30/‑468)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,115	T→C	12.3%	intergenic (+31/‑467)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,900,119	C→T	13.9%	intergenic (+35/‑463)	PP_4308 → / → PP_4309	AsnC family transcriptional regulator/NCS1 family transporter
RA	4,902,716	G→A	7.0%	V196M (GTG→ATG) ‡	PP_4310 →	hydantoin racemase
RA	4,902,717	T→C	7.5%	V196A (GTG→GCG) ‡	PP_4310 →	hydantoin racemase
RA	4,906,508	A→T	5.3%	L112Q (CTG→CAG)	PP_4315 ←	epimerase
RA	4,906,511	A→T	6.0%	L111Q (CTG→CAG)	PP_4315 ←	epimerase
RA	4,914,274	G→T	7.2%	P157Q (CCG→CAG)	ccmF ←	holocytochrome c synthetase
RA	4,914,277	A→C	7.3%	L156R (CTG→CGG)	ccmF ←	holocytochrome c synthetase
RA	4,917,404	A→T	5.3%	F25I (TTC→ATC)	ccmA ←	cytochrome c biogenesis ABC transporter ATP‑binding protein CcmA
RA	4,918,010	G→A	8.0%	V122I (GTC→ATC) ‡	PP_4328 →	hypothetical protein
RA	4,918,011	T→C	7.8%	V122A (GTC→GCC) ‡	PP_4328 →	hypothetical protein
RA	4,930,186	G→C	5.8%	Q11E (CAG→GAG)	cheA ←	chemotaxis histidine kinase CheA
RA	4,930,187	G→C	5.8%	L10L (CTC→CTG)	cheA ←	chemotaxis histidine kinase CheA
RA	4,949,816	G→A	6.3%	V191V (GTC→GTT)	fliM ←	flagellar biosynthesis switching/energizing protein
RA	4,949,820	A→T	7.3%	I190N (ATT→AAT)	fliM ←	flagellar biosynthesis switching/energizing protein
RA	4,949,824	T→C	6.2%	N189D (AAC→GAC)	fliM ←	flagellar biosynthesis switching/energizing protein
RA	4,951,017	T→G	13.0%	intergenic (‑122/+35)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,951,018	C→A	13.1%	intergenic (‑123/+34)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,964,700	C→T	17.0%	E235K (GAA→AAA)	fleQ ←	transcriptional regulator FleQ
RA	4,970,038	T→G	5.2%	T84P (ACT→CCT)	fliC ←	flagellin
RA	4,970,049	C→A	5.5%	G80V (GGC→GTC)	fliC ←	flagellin
RA	4,974,081	T→A	8.6%	K523M (AAG→ATG) ‡	flgK ←	flagellar hook‑associated protein FlgK
RA	4,974,082	T→A	8.7%	K523* (AAG→TAG) ‡	flgK ←	flagellar hook‑associated protein FlgK
RA	4,995,569	Δ1 bp	9.8%	coding (1185/1272 nt)	bkdB →	branched‑chain alpha‑keto acid dehydrogenase complex lipoamide acyltransferase
RA	4,995,572:1	+G	9.0%	coding (1188/1272 nt)	bkdB →	branched‑chain alpha‑keto acid dehydrogenase complex lipoamide acyltransferase
RA	5,001,812	G→T	6.4%	intergenic (+1234/‑452)	PP_4407 → / → PP_4409	gamma‑aminobutyrate transporter/site‑specific recombinase
RA	5,013,331	T→C	10.6%	V35A (GTG→GCG)	PP_5678 →	hypothetical protein
RA	5,013,335	G→C	11.1%	L36L (CTG→CTC)	PP_5678 →	hypothetical protein
RA	5,013,339	G→A	8.3%	A38T (GCG→ACG)	PP_5678 →	hypothetical protein
RA	5,030,796	A→G	10.2%	intergenic (+34/‑461)	PP_4433 → / → dadA‑I	amino acid MFS transporter/D‑amino acid dehydrogenase small subunit
RA	5,030,799	C→T	8.2%	intergenic (+37/‑458)	PP_4433 → / → dadA‑I	amino acid MFS transporter/D‑amino acid dehydrogenase small subunit
RA	5,033,297	G→A	10.8%	R2H (CGC→CAC)	PP_4437 →	transposase
RA	5,039,700	G→T	6.2%	I284I (ATC→ATA) ‡	PP_4446 ←	group II intron‑encoding maturase
RA	5,039,701	A→C	6.3%	I284S (ATC→AGC) ‡	PP_4446 ←	group II intron‑encoding maturase
RA	5,041,297	T→A	8.7%	intergenic (+227/‑435)	PP_5680 → / → PP_4447	Cro/CI family transcriptional regulator/hypothetical protein
RA	5,041,300	T→A	8.5%	intergenic (+230/‑432)	PP_5680 → / → PP_4447	Cro/CI family transcriptional regulator/hypothetical protein
RA	5,047,313	T→A	5.2%	intergenic (+246/+202)	PP_5683 → / ← PP_5684	hypothetical protein/hypothetical protein
RA	5,077,282	G→T	7.9%	intergenic (+29/+79)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,077,285	A→C	7.9%	intergenic (+32/+76)	PP_4470 → / ← mgtE	Arc domain‑containing transcriptional regulator/magnesium transporter
RA	5,079,174	T→A	14.8%	intergenic (‑371/+26)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,079,177	T→A	14.8%	intergenic (‑374/+23)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,080,326	A→T	10.0%	intergenic (‑143/+25)	csrA ← / ← lysC	carbon storage regulator/aspartokinase
RA	5,080,327	A→T	10.1%	intergenic (‑144/+24)	csrA ← / ← lysC	carbon storage regulator/aspartokinase
RA	5,112,689	T→A	7.1%	intergenic (‑230/+36)	rluB ← / ← PP_4497	23S rRNA pseudouridylate synthase B/hypothetical protein
RA	5,112,690	T→A	6.9%	intergenic (‑231/+35)	rluB ← / ← PP_4497	23S rRNA pseudouridylate synthase B/hypothetical protein
RA	5,130,481	A→C	5.8%	L324R (CTG→CGG)	recQ ←	ATP‑dependent DNA 3'‑5' helicase
RA	5,130,488	C→G	5.6%	D322H (GAC→CAC)	recQ ←	ATP‑dependent DNA 3'‑5' helicase
RA	5,134,009	G→T	5.2%	W348L (TGG→TTG) ‡	tolC →	agglutination protein
RA	5,134,010	G→C	5.2%	W348C (TGG→TGC) ‡	tolC →	agglutination protein
RA	5,134,011	A→C	5.9%	N349H (AAC→CAC)	tolC →	agglutination protein
RA	5,135,931	G→C	5.6%	D229E (GAC→GAG)	PP_4521 ←	aerotaxis receptor
RA	5,141,747	G→A	7.8%	V12M (GTG→ATG) ‡	PP_4526 →	MFS transporter
RA	5,141,748	T→C	7.7%	V12A (GTG→GCG) ‡	PP_4526 →	MFS transporter
RA	5,142,055	G→C	5.2%	M114I (ATG→ATC)	PP_4526 →	MFS transporter
RA	5,160,484	C→A	5.3%	D207Y (GAC→TAC)	PP_4543 ←	hypothetical protein
RA	5,171,255	T→A	6.5%	intergenic (+128/+55)	PP_4548 → / ← fadD‑I	oxidoreductase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,172,353	T→C	7.0%	T219A (ACC→GCC)	fadD‑I ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,172,360	G→A	6.2%	G216G (GGC→GGT)	fadD‑I ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,292	T→C	19.3%	intergenic (‑285/+47)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,295	G→C	18.3%	intergenic (‑288/+44)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,296	G→C	18.4%	intergenic (‑289/+43)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,173,299	G→A	19.9%	intergenic (‑292/+40)	fadD‑I ← / ← fadD‑II	long‑chain‑fatty acid‑‑CoA ligase/long‑chain‑fatty acid‑‑CoA ligase
RA	5,181,194	A→T	6.0%	L266H (CTC→CAC)	PP_4560 ←	ribonuclease BN
RA	5,181,197	A→T	6.0%	L265Q (CTG→CAG)	PP_4560 ←	ribonuclease BN
RA	5,181,200	A→T	5.9%	L264Q (CTG→CAG)	PP_4560 ←	ribonuclease BN
RA	5,181,203	A→T	5.9%	V263E (GTG→GAG)	PP_4560 ←	ribonuclease BN
RA	5,181,208	Δ1 bp	5.9%	coding (783/957 nt)	PP_4560 ←	ribonuclease BN
RA	5,182,107	G→T	14.9%	intergenic (‑117/+37)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,113	T→G	14.8%	intergenic (‑123/+31)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,114	C→A	15.4%	intergenic (‑124/+30)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,120	A→C	12.7%	intergenic (‑130/+24)	PP_4560 ← / ← csbD	ribonuclease BN/stress response protein
RA	5,182,971	G→C	6.3%	H271D (CAT→GAT)	PP_4563 ←	hypothetical protein
RA	5,182,972	G→C	5.6%	I270M (ATC→ATG)	PP_4563 ←	hypothetical protein
RA	5,184,158	A→C	6.5%	M83L (ATG→CTG)	PP_4564 →	lipoprotein
RA	5,184,165	C→T	7.1%	A85V (GCC→GTC)	PP_4564 →	lipoprotein
RA	5,184,168	A→G	8.8%	D86G (GAC→GGC)	PP_4564 →	lipoprotein
RA	5,184,175	G→T	6.4%	Q88H (CAG→CAT)	PP_4564 →	lipoprotein
RA	5,192,822	T→A	10.0%	intergenic (+155/‑47)	PP_4572 → / → PP_4573	hypothetical protein/AAA family ATPase
RA	5,192,823	T→A	10.0%	intergenic (+156/‑46)	PP_4572 → / → PP_4573	hypothetical protein/AAA family ATPase
RA	5,194,935	T→G	13.8%	intergenic (+29/+24)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,194,936	C→A	13.4%	intergenic (+30/+23)	PP_4574 → / ← PP_4575	hypothetical protein/urea amidolyase‑like protein
RA	5,199,693	G→C	9.9%	intergenic (+20/+53)	PP_4579 → / ← PP_4580	LysR family transcriptional regulator/hypothetical protein
RA	5,212,520	C→T	6.5%	intergenic (+36/+58)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,523	G→A	6.4%	intergenic (+39/+55)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,212,535	A→G	5.8%	intergenic (+51/+43)	PP_4593 → / ← PP_4594	hypothetical protein/cystathionine gamma‑synthase
RA	5,229,239	Δ1 bp	9.1%	intergenic (‑133/+43)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,243	C→G	9.3%	intergenic (‑137/+39)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,246	C→G	8.9%	intergenic (‑140/+36)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,229,249:1	+C	10.0%	intergenic (‑143/+33)	PP_4606 ← / ← PP_4607	ferric siderophore receptor/transmembrane sensor
RA	5,230,081	G→C	5.7%	P61R (CCG→CGG) ‡	PP_4607 ←	transmembrane sensor
RA	5,230,082	G→C	5.3%	P61A (CCG→GCG) ‡	PP_4607 ←	transmembrane sensor
RA	5,232,102	C→G	11.7%	A214A (GCG→GCC)	PP_4610 ←	PepSY‑associated TM helix domain‑containing protein
RA	5,232,105	C→G	11.8%	P213P (CCG→CCC)	PP_4610 ←	PepSY‑associated TM helix domain‑containing protein
RA	5,233,591	T→C	8.8%	V136A (GTC→GCC)	PP_4611 →	ECF family RNA polymerase sigma‑70 factor
RA	5,233,594	A→T	8.7%	D137V (GAC→GTC)	PP_4611 →	ECF family RNA polymerase sigma‑70 factor
RA	5,233,597	G→A	8.9%	G138D (GGC→GAC)	PP_4611 →	ECF family RNA polymerase sigma‑70 factor
RA	5,239,932	G→A	12.1%	A144V (GCG→GTG)	ldh ←	leucine dehydrogenase
RA	5,239,937	T→C	11.4%	P142P (CCA→CCG)	ldh ←	leucine dehydrogenase
RA	5,257,737	A→C	5.0%	V38G (GTG→GGG)	PP_4634 ←	alpha/beta family hydrolase
RA	5,261,122	G→T	7.4%	P176Q (CCG→CAG)	PP_4637 ←	5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase family protein
RA	5,261,125	A→C	7.2%	L175R (CTG→CGG)	PP_4637 ←	5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase family protein
RA	5,262,544	T→A	6.3%	T223T (ACT→ACA)	PP_4638 →	methylenetetrahydrofolate reductase
RA	5,272,660	C→G	5.9%	A188G (GCC→GGC)	PP_4647 →	transcriptional regulator, LuxR family
RA	5,273,087	C→G	5.9%	S62R (AGC→AGG)	rlmG →	ribosomal RNA large subunit methyltransferase G
RA	5,273,093	Δ1 bp	6.1%	coding (192/1125 nt)	rlmG →	ribosomal RNA large subunit methyltransferase G
RA	5,275,945	G→T	6.1%	P267Q (CCG→CAG)	cioA ←	cyanide insensitive ubiquinol oxidase subunit I
RA	5,313,324	C→G	16.1%	intergenic (‑595/+119)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,313,327	C→G	17.3%	intergenic (‑598/+116)	PP_16SG ← / ← msrQ	16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit
RA	5,324,201	T→C	8.4%	C263R (TGC→CGC)	PP_4684 →	kinase‑like domain‑containing protein
RA	5,324,205	T→G	8.7%	L264R (CTG→CGG)	PP_4684 →	kinase‑like domain‑containing protein
RA	5,324,210	C→A	8.0%	R266R (CGG→AGG)	PP_4684 →	kinase‑like domain‑containing protein
RA	5,324,214	G→A	6.7%	R267H (CGC→CAC)	PP_4684 →	kinase‑like domain‑containing protein
RA	5,329,444	T→A	9.6%	L10Q (CTG→CAG)	PP_4690 →	Rieske 2Fe‑2S family protein
RA	5,331,103	G→A	5.9%	A169V (GCC→GTC)	PP_4692 ←	aspartate/tyrosine/aromatic aminotransferase
RA	5,331,109	A→T	5.7%	V167D (GTC→GAC)	PP_4692 ←	aspartate/tyrosine/aromatic aminotransferase
RA	5,331,115	T→C	5.0%	D165G (GAC→GGC)	PP_4692 ←	aspartate/tyrosine/aromatic aminotransferase
RA	5,333,684	C→A	36.9%	F22L (TTC→TTA)	PP_4695 →	two‑component system sensor histidine kinase
RA	5,336,227	G→A	6.3%	R870H (CGC→CAC)	PP_4695 →	two‑component system sensor histidine kinase
RA	5,336,233	C→G	6.2%	A872G (GCC→GGC)	PP_4695 →	two‑component system sensor histidine kinase
RA	5,337,484	C→A	6.5%	L296M (CTG→ATG)	PP_4696 →	nitrogen regulation protein NR(I)
RA	5,338,086	A→G	5.9%	intergenic (+45/‑239)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,338,098	C→G	10.7%	intergenic (+57/‑227)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,338,101	C→G	10.9%	intergenic (+60/‑224)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,338,113	C→T	10.2%	intergenic (+72/‑212)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,338,119	A→C	9.2%	intergenic (+78/‑206)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,338,121	G→A	6.7%	intergenic (+80/‑204)	PP_4696 → / → PP_mr53	nitrogen regulation protein NR(I)/CrcZ ncRNA
RA	5,338,677	T→C	7.5%	noncoding (353/395 nt)	PP_mr53 →	CrcZ ncRNA
RA	5,338,680	G→A	7.8%	noncoding (356/395 nt)	PP_mr53 →	CrcZ ncRNA
RA	5,344,509:1	+C	6.5%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,509:2	+T	6.5%	intergenic (+36/‑142)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,515	C→G	14.3%	intergenic (+42/‑136)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,519	C→T	14.5%	intergenic (+46/‑132)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,528	A→G	14.6%	intergenic (+55/‑123)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,532	C→G	13.0%	intergenic (+59/‑119)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,537	Δ1 bp	10.1%	intergenic (+64/‑114)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,344,538	Δ1 bp	10.1%	intergenic (+65/‑113)	pgi‑II → / → acsA‑II	glucose 6‑phosphate isomerase/acetyl‑CoA synthetase
RA	5,352,025	G→T	10.8%	intergenic (‑230/+34)	PP_4707 ← / ← pnp	OsmY‑like protein/polyribonucleotide nucleotidyltransferase
RA	5,352,028	A→C	10.7%	intergenic (‑233/+31)	PP_4707 ← / ← pnp	OsmY‑like protein/polyribonucleotide nucleotidyltransferase
RA	5,356,514	C→G	5.1%	K765N (AAG→AAC)	infB ←	translation initiation factor IF‑2
RA	5,356,563	T→G	6.8%	E749A (GAG→GCG)	infB ←	translation initiation factor IF‑2
RA	5,356,566	C→A	6.6%	R748L (CGC→CTC)	infB ←	translation initiation factor IF‑2
RA	5,362,263	C→G	6.6%	V49L (GTG→CTG)	tpiA ←	triose phosphate isomerase
RA	5,362,264	C→G	6.6%	Q48H (CAG→CAC)	tpiA ←	triose phosphate isomerase
RA	5,366,334	G→A	5.5%	V90V (GTC→GTT)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,366,345	T→C	5.6%	N87D (AAC→GAC)	ftsH ←	integral membrane ATP‑dependent zinc metallopeptidase
RA	5,376,427	G→C	6.3%	P396A (CCG→GCG)	dnaK ←	chaperone protein DnaK
RA	5,378,068	C→G	8.6%	K68N (AAG→AAC)	grpE ←	heat shock protein GrpE
RA	5,378,308	A→T	6.0%	intergenic (‑37/‑156)	grpE ← / → recN	heat shock protein GrpE/DNA repair/recombination protein
RA	5,378,931	C→G	6.4%	A156A (GCC→GCG)	recN →	DNA repair/recombination protein
RA	5,378,932	C→G	5.9%	R157G (CGC→GGC)	recN →	DNA repair/recombination protein
RA	5,389,315	T→A	8.0%	L926Q (CTG→CAG)	dld2 →	D‑lactate dehydrogenase
RA	5,390,479	T→G	6.7%	intergenic (+520/‑202)	PP_4738 → / → PP_mr56	hypothetical protein/C4 ncRNA
RA	5,390,480	C→A	6.1%	intergenic (+521/‑201)	PP_4738 → / → PP_mr56	hypothetical protein/C4 ncRNA
RA	5,398,502	G→T	5.3%	G489V (GGA→GTA)	hsdS →	type I restriction modification system specificity protein
RA	5,415,792	T→C	6.4%	A11A (GCA→GCG) ‡	gabP‑V ←	gamma‑aminobutyrate permease
RA	5,415,793	G→A	6.4%	A11V (GCA→GTA) ‡	gabP‑V ←	gamma‑aminobutyrate permease
RA	5,424,538	Δ1 bp	6.8%	coding (89/915 nt)	PP_4764 →	histone deacetylase family protein
RA	5,424,545	C→G	5.2%	H32Q (CAC→CAG)	PP_4764 →	histone deacetylase family protein
RA	5,424,546	C→G	5.2%	L33V (CTG→GTG)	PP_4764 →	histone deacetylase family protein
RA	5,427,963	A→T	8.5%	L63Q (CTG→CAG)	rhlE‑I ←	ATP‑dependent RNA helicase
RA	5,430,440	A→G	7.9%	intergenic (‑74/+87)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,430,444	A→G	7.9%	intergenic (‑78/+83)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,430,445:1	+A	8.7%	intergenic (‑79/+82)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,430,452	Δ1 bp	8.5%	intergenic (‑86/+75)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,430,454	C→T	8.4%	intergenic (‑88/+73)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,430,458	C→T	8.2%	intergenic (‑92/+69)	PP_4769 ← / ← PP_4770	hypothetical protein/hypothetical protein
RA	5,436,113	G→T	5.7%	E82* (GAG→TAG) ‡	fieF →	divalent cation efflux transporter
RA	5,436,114	A→C	5.9%	E82A (GAG→GCG) ‡	fieF →	divalent cation efflux transporter
RA	5,451,654:1	+G	7.0%	coding (137/1518 nt)	lnt →	apolipoprotein N‑acyltransferase
RA	5,451,660	A→G	9.7%	E48G (GAG→GGG)	lnt →	apolipoprotein N‑acyltransferase
RA	5,451,664	C→G	8.8%	L49L (CTC→CTG)	lnt →	apolipoprotein N‑acyltransferase
RA	5,451,668	C→T	9.0%	P51S (CCG→TCG)	lnt →	apolipoprotein N‑acyltransferase
RA	5,451,673	Δ1 bp	5.5%	coding (156/1518 nt)	lnt →	apolipoprotein N‑acyltransferase
RA	5,458,940:1	+A	9.0%	intergenic (+17/‑45)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,458,946	Δ1 bp	9.1%	intergenic (+23/‑39)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,468,121:1	+A	11.5%	coding (819/1047 nt)	mltB ←	membrane‑bound lytic murein transglycosylase B
RA	5,468,126	Δ1 bp	11.5%	coding (814/1047 nt)	mltB ←	membrane‑bound lytic murein transglycosylase B
RA	5,469,228	A→T	5.8%	L273H (CTC→CAC)	mrdB ←	murein transpeptidase factor
RA	5,469,231	A→T	6.0%	V272E (GTG→GAG)	mrdB ←	murein transpeptidase factor
RA	5,485,198	A→G	8.8%	intergenic (+56/‑91)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,201	A→G	9.8%	intergenic (+59/‑88)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,202	T→C	9.4%	intergenic (+60/‑87)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,207	G→A	9.4%	intergenic (+65/‑82)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,210	T→C	9.2%	intergenic (+68/‑79)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,215	G→A	9.2%	intergenic (+73/‑74)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,216	C→T	9.2%	intergenic (+74/‑73)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,485,219	C→T	9.1%	intergenic (+77/‑70)	purH → / → purD	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase
RA	5,503,183	C→A	9.7%	L29M (CTG→ATG) ‡	oprC →	copper receptor OprC
RA	5,503,184	T→G	9.1%	L29R (CTG→CGG) ‡	oprC →	copper receptor OprC
RA	5,503,190	C→G	10.2%	A31G (GCC→GGC)	oprC →	copper receptor OprC
RA	5,503,196	C→A	9.1%	P33H (CCT→CAT) ‡	oprC →	copper receptor OprC
RA	5,503,197	T→G	9.2%	P33P (CCT→CCG) ‡	oprC →	copper receptor OprC
RA	5,507,063	C→A	5.3%	P92P (CCC→CCA)	cycA →	D‑alanine/beta‑alanine/D‑serine/glycine permease
RA	5,507,064	T→G	5.1%	W93G (TGG→GGG)	cycA →	D‑alanine/beta‑alanine/D‑serine/glycine permease
RA	5,525,527	T→C	10.2%	R89R (CGT→CGC)	PP_4858 →	hypothetical protein
RA	5,529,408	C→G	6.4%	intergenic (‑574/+20)	ydfG ← / ← livF‑II	bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase/ABC transporter ATP‑binding protein
RA	5,537,055	T→G	5.8%	L271R (CTG→CGG)	nadE →	NH(3)‑dependent NAD(+) synthetase
RA	5,537,058	C→A	5.5%	P272Q (CCG→CAG)	nadE →	NH(3)‑dependent NAD(+) synthetase
RA	5,541,768	T→A	8.0%	I327F (ATC→TTC)	dnaB ←	replicative DNA helicase
RA	5,541,769	T→A	7.7%	E326D (GAA→GAT)	dnaB ←	replicative DNA helicase
RA	5,546,501	G→A	12.9%	H11Y (CAC→TAC)	rlmB ←	23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
RA	5,546,502	T→C	13.5%	V10V (GTA→GTG)	rlmB ←	23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
RA	5,549,653	T→A	7.6%	intergenic (+18/‑154)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,549,654	T→A	8.0%	intergenic (+19/‑153)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,551,707	T→G	5.3%	I296M (ATT→ATG)	PP_4882 →	iron ABC transporter permease
RA	5,552,961	T→G	5.2%	intergenic (+576/+85)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,552,962	T→A	5.2%	intergenic (+577/+84)	PP_4882 → / ← PP_5717	iron ABC transporter permease/hypothetical protein
RA	5,560,063	T→G	5.0%	D162A (GAC→GCC)	hisZ ←	ATP phosphoribosyltransferase regulatory subunit
RA	5,564,575	C→T	14.4%	intergenic (‑5/+90)	hfq ← / ← miaA	RNA‑binding protein Hfq/tRNA (adenosine(37)‑N6)‑dimethylallyltransferase MiaA
RA	5,566,464	T→A	9.4%	Q358L (CAG→CTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,566,467	T→A	9.4%	Q357L (CAG→CTG)	mutL ←	DNA mismatch repair protein MutL
RA	5,574,838:1	+T	5.3%	coding (507/1041 nt)	motB ←	flagellar motor rotation protein
RA	5,574,842	Δ1 bp	5.9%	coding (503/1041 nt)	motB ←	flagellar motor rotation protein
RA	5,579,833	C→G	5.9%	V361V (GTG→GTC)	serB ←	phosphoserine phosphatase
RA	5,609,045	G→C	5.9%	R202G (CGC→GGC)	waaA ←	3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,609,048	C→G	5.7%	E201Q (GAG→CAG)	waaA ←	3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,609,051	G→C	5.8%	P200A (CCT→GCT)	waaA ←	3‑deoxy‑D‑manno‑octulosonic acid transferase
JC	5,610,136	(GC)3→1	15.5%	coding (427‑430/906 nt)	PP_4929 ←	LysR family transcriptional regulator
RA	5,610,767	T→C	81.4%	F44S (TTC→TCC)	emrE →	small multidrug resistance protein
RA	5,614,099	A→G	7.8%	intergenic (+30/+52)	PP_4933 → / ← hldE	hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,106	A→T	9.3%	intergenic (+37/+45)	PP_4933 → / ← hldE	hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,107	A→T	9.2%	intergenic (+38/+44)	PP_4933 → / ← hldE	hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,114	C→T	6.7%	intergenic (+45/+37)	PP_4933 → / ← hldE	hypothetical protein/bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,634,508	T→G	19.9%	intergenic (+33/+350)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,634,509	C→A	18.8%	intergenic (+34/+349)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,643,352	C→T	5.4%	intergenic (+86/‑37)	dbpA → / → yhiN	23S rRNA specific ATP‑dependent RNA helicase/FAD/NAD(P)‑binding domain‑containing oxidoreductase
RA	5,651,425	T→G	7.5%	intergenic (‑182/+31)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,651,428	C→A	7.3%	intergenic (‑185/+28)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,653,045	C→A	9.7%	intergenic (‑95/+66)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,653,053	C→T	9.5%	intergenic (‑103/+58)	PP_4961 ← / ← PP_4962	lipoprotein/hypothetical protein
RA	5,655,677:1	+A	31.1%	intergenic (‑81/+71)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,682	T→G	33.4%	intergenic (‑86/+66)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,687	C→A	31.9%	intergenic (‑91/+61)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,692	Δ1 bp	29.2%	intergenic (‑96/+56)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,660,233	G→T	7.9%	intergenic (+35/‑194)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,660,236	A→C	8.0%	intergenic (+38/‑191)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,670,015	C→G	6.0%	H147Q (CAC→CAG)	metF →	5,10‑methylenetetrahydrofolate reductase
RA	5,670,016	C→G	6.8%	L148V (CTG→GTG)	metF →	5,10‑methylenetetrahydrofolate reductase
RA	5,670,514	T→C	5.9%	intergenic (+52/‑33)	metF → / → PP_4978	5,10‑methylenetetrahydrofolate reductase/hypothetical protein
RA	5,685,956	G→C	6.5%	P331P (CCC→CCG) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,958	G→C	6.5%	P331A (CCC→GCC) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,965	G→C	6.7%	R328R (CGC→CGG) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,685,967	G→C	6.2%	R328G (CGC→GGC) ‡	PP_4988 ←	signal transduction histidine kinase CheA/CheY‑like receiver
RA	5,699,805	A→G	5.7%	D76G (GAC→GGC) ‡	phaA →	poly(3‑hydroxyalkanoate) polymerase
RA	5,699,806	C→T	5.3%	D76D (GAC→GAT) ‡	phaA →	poly(3‑hydroxyalkanoate) polymerase
RA	5,706,643	T→A	7.1%	L202Q (CTG→CAG)	PP_5009 →	hypothetical protein
RA	5,734,098	A→G	9.4%	intergenic (‑68/+89)	proY ← / ← hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
RA	5,740,523	T→G	9.0%	intergenic (+32/+39)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,526	A→T	11.6%	intergenic (+35/+36)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,527	A→T	10.3%	intergenic (+36/+35)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,530	C→A	10.0%	intergenic (+39/+32)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,540	T→C	10.0%	intergenic (+49/+22)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,741,564	A→T	8.7%	intergenic (‑179/+49)	PP_5038 ← / ← PP_5039	lipoprotein/hypothetical protein
RA	5,741,940	G→C	5.1%	D90E (GAC→GAG) ‡	PP_5039 ←	hypothetical protein
RA	5,741,941	T→G	5.7%	D90A (GAC→GCC) ‡	PP_5039 ←	hypothetical protein
RA	5,741,946	C→T	5.1%	E88E (GAG→GAA)	PP_5039 ←	hypothetical protein
RA	5,743,387	G→A	7.7%	intergenic (‑164/+83)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,391	T→C	12.2%	intergenic (‑168/+79)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,903	A→C	5.5%	L673R (CTC→CGC)	glgP ←	glycogen phosphorylase
RA	5,743,906	G→T	5.7%	A672E (GCG→GAG)	glgP ←	glycogen phosphorylase
RA	5,746,541	G→C	9.7%	intergenic (+32/+67)	PP_5042 → / ← PP_5043	hypothetical protein/PhoPQ‑activated pathogenicity‑like protein
RA	5,746,544	G→C	9.6%	intergenic (+35/+64)	PP_5042 → / ← PP_5043	hypothetical protein/PhoPQ‑activated pathogenicity‑like protein
RA	5,750,455	A→G	5.1%	H388H (CAT→CAC)	thiI ←	tRNA sulfurtransferase
RA	5,756,590	A→T	6.5%	intergenic (+211/‑477)	glnG → / → PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase
RA	5,756,591	A→T	5.8%	intergenic (+212/‑476)	glnG → / → PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase
RA	5,776,798	T→G	8.0%	T353T (ACT→ACG)	betA‑II →	choline dehydrogenase
RA	5,776,799	C→A	9.0%	R354S (CGT→AGT)	betA‑II →	choline dehydrogenase
RA	5,783,375	C→G	6.8%	V598V (GTC→GTG)	kefA →	intermediate mechanosensitive channel protein
RA	5,783,376	C→G	6.3%	H599D (CAC→GAC)	kefA →	intermediate mechanosensitive channel protein
RA	5,790,676	A→T	7.0%	intergenic (‑24/+33)	PP_5073 ← / ← hemE	hypothetical protein/uroporphyrinogen decarboxylase
RA	5,790,681	A→T	7.0%	intergenic (‑29/+28)	PP_5073 ← / ← hemE	hypothetical protein/uroporphyrinogen decarboxylase
RA	5,799,020	G→T	5.1%	P300Q (CCA→CAA)	PP_5077 ←	hypothetical protein
RA	5,808,041	T→C	6.9%	intergenic (+120/+35)	mrcA → / ← maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
RA	5,815,587	C→T	5.2%	intergenic (+15/+76)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,592	G→T	6.7%	intergenic (+20/+71)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,595	A→C	5.3%	intergenic (+23/+68)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,815,600	A→G	5.3%	intergenic (+28/+63)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,816,587	C→G	8.0%	A114G (GCC→GGC)	PP_5092 →	NLP/P60 protein
RA	5,816,973	C→T	13.7%	intergenic (+103/+26)	PP_5092 → / ← pilT	NLP/P60 protein/twitching motility protein
RA	5,823,170	C→T	5.2%	P17L (CCG→CTG)	yggW →	coproporphyrinogen/heterocyclic compound oxidase
RA	5,824,908	G→T	5.5%	T207T (ACC→ACA)	trmB ←	tRNA (guanosine(46)‑N7)‑methyltransferase TrmB
RA	5,827,811	G→C	5.0%	G223A (GGG→GCG)	mtgA →	monofunctional biosynthetic peptidoglycan transglycosylase
RA	5,841,788	C→G	5.6%	R101G (CGC→GGC)	calB →	coniferyl aldehyde dehydrogenase
RA	5,843,556	G→C	5.8%	G41A (GGC→GCC)	PP_5122 →	GMC family oxidoreductase
RA	5,844,152	A→G	6.6%	T240A (ACA→GCA)	PP_5122 →	GMC family oxidoreductase
RA	5,844,157	C→T	6.1%	C241C (TGC→TGT)	PP_5122 →	GMC family oxidoreductase
RA	5,844,163	C→T	5.1%	A243A (GCC→GCT)	PP_5122 →	GMC family oxidoreductase
RA	5,849,102	C→T	7.6%	intergenic (+21/‑250)	rlmI → / → ilvD	ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase
RA	5,849,103	C→G	8.0%	intergenic (+22/‑249)	rlmI → / → ilvD	ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase
RA	5,849,104	A→G	7.4%	intergenic (+23/‑248)	rlmI → / → ilvD	ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase
RA	5,849,426	C→A	5.4%	T25T (ACC→ACA)	ilvD →	dihydroxy‑acid dehydratase
RA	5,854,146	T→A	5.3%	L37Q (CTG→CAG)	tcyP →	sodium/cystine symporter
RA	5,857,746	Δ1 bp	6.9%	coding (239/1371 nt)	PP_5134 →	hypothetical protein
RA	5,857,750:1	+T	7.0%	coding (243/1371 nt)	PP_5134 →	hypothetical protein
RA	5,857,759	G→T	5.4%	E84D (GAG→GAT)	PP_5134 →	hypothetical protein
RA	5,866,752	G→T	9.2%	intergenic (+19/+38)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,866,753	A→C	9.1%	intergenic (+20/+37)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,867,789:1	+C	6.1%	intergenic (‑28/+24)	thyA ← / ← lgt	thymidylate synthase/prolipoprotein diacylglyceryl transferase
RA	5,867,794	Δ1 bp	5.8%	intergenic (‑33/+19)	thyA ← / ← lgt	thymidylate synthase/prolipoprotein diacylglyceryl transferase
RA	5,873,631	C→A	7.1%	L94M (CTG→ATG) ‡	PP_5147 →	haloacid dehalogenase‑like family hydrolase
RA	5,873,632	T→G	7.4%	L94R (CTG→CGG) ‡	PP_5147 →	haloacid dehalogenase‑like family hydrolase
RA	5,874,875	G→T	6.4%	S451* (TCG→TAG) ‡	ilvA‑II ←	threonine deaminase
RA	5,874,876	A→C	6.5%	S451A (TCG→GCG) ‡	ilvA‑II ←	threonine deaminase
RA	5,886,820	C→G	13.1%	W84C (TGG→TGC)	PP_5161 ←	lysophospholipase
RA	5,886,825	C→G	12.7%	A83P (GCA→CCA)	PP_5161 ←	lysophospholipase
RA	5,891,704	A→T	6.5%	intergenic (‑31/+145)	plpB ← / ← PP_5166	NLPA lipoprotein/sigma‑54 dependent transcriptional regulator
RA	5,903,220	G→T	11.2%	intergenic (‑128/‑140)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,903,221	A→C	11.8%	intergenic (‑129/‑139)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,914,167	G→A	9.9%	intergenic (+3/+150)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,914,180	C→T	10.9%	intergenic (+16/+137)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,914,182	C→G	10.4%	intergenic (+18/+135)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,914,184	A→G	10.7%	intergenic (+20/+133)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,914,212	T→C	7.0%	intergenic (+48/+105)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,920,559	C→T	5.1%	V363V (GTC→GTT)	PP_5190 →	type II secretion system protein
RA	5,920,560	A→G	5.1%	N364D (AAC→GAC)	PP_5190 →	type II secretion system protein
RA	5,928,771	G→A	8.3%	R112C (CGC→TGC)	fbpA ←	iron ABC transporter substrate‑binding protein
RA	5,928,776	T→C	7.3%	Q110R (CAG→CGG)	fbpA ←	iron ABC transporter substrate‑binding protein
RA	5,948,729:1	+G	5.0%	intergenic (‑54/+28)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,948,738	T→A	12.1%	intergenic (‑63/+19)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,948,739	T→A	12.1%	intergenic (‑64/+18)	PP_mr62 ← / ← trxA	Pseudomon‑Rho regulatory region/thioredoxin I
RA	5,951,040	C→A	8.7%	R658L (CGT→CTT)	ppk ←	polyphosphate kinase
RA	5,951,043	T→G	8.1%	K657T (AAG→ACG)	ppk ←	polyphosphate kinase
RA	5,961,684	T→A	6.6%	I175N (ATT→AAT)	lysA‑II →	diaminopimelate decarboxylase
RA	5,961,687	C→G	7.2%	A176G (GCC→GGC)	lysA‑II →	diaminopimelate decarboxylase
RA	5,963,902	T→G	8.2%	Y216D (TAT→GAT)	PP_5229 →	hypothetical protein
RA	5,963,907	C→A	8.0%	I217I (ATC→ATA)	PP_5229 →	hypothetical protein
RA	5,975,623	G→T	6.7%	intergenic (+511/‑633)	PP_5727 → / → yifB	hypothetical protein/ATP‑dependent chelatase
RA	5,984,492	T→C	12.3%	intergenic (+32/+57)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,498	G→A	13.2%	intergenic (+38/+51)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,500	T→C	15.1%	intergenic (+40/+49)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,503	G→A	14.8%	intergenic (+43/+46)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,505	T→C	14.7%	intergenic (+45/+44)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,984,511	G→A	14.9%	intergenic (+51/+38)	PP_5242 → / ← ycaC‑II	GAF domain‑containing sensor histidine kinase/putative hydrolase
RA	5,988,865	G→A	21.8%	intergenic (+103/‑443)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,875	T→C	22.2%	intergenic (+113/‑433)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,880	C→T	24.0%	intergenic (+118/‑428)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,881	G→T	23.8%	intergenic (+119/‑427)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,882	C→T	24.0%	intergenic (+120/‑426)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,885	A→G	23.8%	intergenic (+123/‑423)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,891	G→C	24.0%	intergenic (+129/‑417)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,893	C→G	23.7%	intergenic (+131/‑415)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,896	C→T	23.6%	intergenic (+134/‑412)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,900	C→G	24.3%	intergenic (+138/‑408)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,904	C→T	24.1%	intergenic (+142/‑404)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,906	C→T	23.5%	intergenic (+144/‑402)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,945	C→A	30.1%	intergenic (+183/‑363)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,950	C→T	28.9%	intergenic (+188/‑358)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,951	A→G	28.9%	intergenic (+189/‑357)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,961	T→C	31.8%	intergenic (+199/‑347)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,967	Δ1 bp	27.4%	intergenic (+205/‑341)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,989,007	G→C	8.6%	intergenic (+245/‑301)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,989,010	G→C	8.5%	intergenic (+248/‑298)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,997,245:1	+G	35.8%	intergenic (‑158/+42)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	5,997,250	Δ1 bp	36.2%	intergenic (‑163/+37)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	6,005,043	T→G	13.0%	intergenic (+25/‑151)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,050	G→C	15.3%	intergenic (+32/‑144)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,053	A→T	15.2%	intergenic (+35/‑141)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,056	G→C	16.0%	intergenic (+38/‑138)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,005,063	C→A	11.8%	intergenic (+45/‑131)	PP_5259 → / → ydcJ	LysR family transcriptional regulator/metalloprotein
RA	6,013,917	C→T	10.1%	intergenic (+66/+44)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,919	T→C	9.6%	intergenic (+68/+42)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,020,607	G→A	6.0%	P33L (CCG→CTG)	dadA‑II ←	D‑amino acid:quinone oxidoreductase
RA	6,020,610	T→C	5.7%	Q32R (CAG→CGG)	dadA‑II ←	D‑amino acid:quinone oxidoreductase
RA	6,021,756	T→G	5.7%	intergenic (‑51/‑93)	PP_5272 ← / → PP_5273	hypothetical protein/oxidoreductase
RA	6,021,757	C→A	5.8%	intergenic (‑52/‑92)	PP_5272 ← / → PP_5273	hypothetical protein/oxidoreductase
RA	6,023,215	G→A	6.2%	intergenic (+74/+70)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,023,216	T→C	6.2%	intergenic (+75/+69)	PP_5273 → / ← PP_5274	oxidoreductase/hypothetical protein
RA	6,027,278	A→T	8.2%	F212Y (TTC→TAC) ‡	PP_5277 ←	MFS transporter
RA	6,027,279	A→T	8.8%	F212I (TTC→ATC) ‡	PP_5277 ←	MFS transporter
RA	6,027,955	A→T	13.2%	intergenic (‑43/+68)	PP_5277 ← / ← kauB	MFS transporter/4‑guanidinobutyraldehyde dehydrogenase
RA	6,027,956	A→T	13.2%	intergenic (‑44/+67)	PP_5277 ← / ← kauB	MFS transporter/4‑guanidinobutyraldehyde dehydrogenase
RA	6,040,850	T→A	5.9%	intergenic (+19/+15)	PP_5292 → / ← PP_5293	catabolite repression control protein/hypothetical protein
RA	6,043,722	T→A	10.9%	intergenic (+18/+16)	gmk → / ← PP_5297	deoxyguanylate kinase/guanylate kinase/amino acid transporter
RA	6,044,296	A→G	7.3%	S350S (AGT→AGC)	PP_5297 ←	amino acid transporter
RA	6,044,305	C→T	7.3%	V347V (GTG→GTA)	PP_5297 ←	amino acid transporter
RA	6,051,724	C→A	6.0%	intergenic (+17/‑40)	ridA → / → PP_5304	aminoacrylate/iminopropionate hydrolase/deaminase/lipoprotein
RA	6,051,725	C→G	6.3%	intergenic (+18/‑39)	ridA → / → PP_5304	aminoacrylate/iminopropionate hydrolase/deaminase/lipoprotein
RA	6,051,726	T→G	5.8%	intergenic (+19/‑38)	ridA → / → PP_5304	aminoacrylate/iminopropionate hydrolase/deaminase/lipoprotein
RA	6,072,960	G→A	8.0%	P451L (CCG→CTG)	PP_5327 ←	phosphate ABC transporter permease
RA	6,072,962	G→C	7.5%	S450R (AGC→AGG)	PP_5327 ←	phosphate ABC transporter permease
RA	6,076,147	G→T	5.2%	G157G (GGC→GGA)	PP_5328 ←	phosphate ABC transporter permease
RA	6,081,044	T→A	12.6%	intergenic (+35/+27)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,081,045	T→A	12.5%	intergenic (+36/+26)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
JC	6,098,315	Δ9 bp	78.4%	coding (822‑830/867 nt)	PP_5350 ←	RpiR family transcriptional regulator
RA	6,104,109	T→A	13.2%	intergenic (+31/‑83)	PP_5353 → / → PP_5354	hypothetical protein/hypothetical protein
RA	6,104,110	T→A	13.9%	intergenic (+32/‑82)	PP_5353 → / → PP_5354	hypothetical protein/hypothetical protein
RA	6,108,391	G→C	9.9%	W23C (TGG→TGC)	PP_5358 →	hypothetical protein
RA	6,112,033	T→A	7.1%	H118Q (CAT→CAA)	PP_5362 →	hypothetical protein
RA	6,125,913	G→T	6.0%	G218W (GGG→TGG)	PP_5374 →	choline/carnitine/betaine transporter family protein
RA	6,125,918	G→C	6.1%	L219L (CTG→CTC)	PP_5374 →	choline/carnitine/betaine transporter family protein
RA	6,125,923	A→C	5.7%	Q221P (CAG→CCG)	PP_5374 →	choline/carnitine/betaine transporter family protein
RA	6,129,226	C→T	6.2%	intergenic (+32/+35)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,129,229	A→T	6.1%	intergenic (+35/+32)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,129,232	A→G	6.1%	intergenic (+38/+29)	PP_5376 → / ← PP_5377	hypothetical protein/hypothetical protein
RA	6,131,506	C→T	7.2%	A24A (GCG→GCA)	copB‑II ←	copper resistance protein B
RA	6,131,509	A→T	7.6%	A23A (GCT→GCA)	copB‑II ←	copper resistance protein B
RA	6,131,512	A→T	8.4%	A22A (GCT→GCA)	copB‑II ←	copper resistance protein B
RA	6,131,515	A→G	7.7%	G21G (GGT→GGC)	copB‑II ←	copper resistance protein B
RA	6,169,837	T→A	5.2%	S172C (AGC→TGC)	PP_5408 ←	hypothetical protein
RA	6,169,846	T→A	5.8%	S169C (AGC→TGC)	PP_5408 ←	hypothetical protein
RA	6,174,764	G→T	7.2%	intergenic (‑70/+49)	glmU ← / ← atpC	bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/ATP synthase subunit epsilon
RA	6,174,765	A→C	8.0%	intergenic (‑71/+48)	glmU ← / ← atpC	bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/ATP synthase subunit epsilon

Unassigned missing coverage evidence
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4808194	4808218	25	42 [41]	[0] 58	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	31361 =	203 (2.180)	13 (0.150)	10/228	NT	6.7%	intergenic (+25/‑43)	PP_0026/PP_0027	cobalt/cadmium/zinc exporter/membrane protein
	?	NC_002947	31389 =	179 (2.100)					intergenic (+53/‑15)	PP_0026/PP_0027	cobalt/cadmium/zinc exporter/membrane protein
*	?	NC_002947	= 39518	157 (1.680)	13 (0.150)	10/236	NT	8.2%	coding (247/969 nt)	PP_0036	transcriptional regulator
	?	NC_002947	= 39530	143 (1.620)					coding (259/969 nt)	PP_0036	transcriptional regulator
*	?	NC_002947	= 55316	70 (0.750)	57 (0.610)	51/250	NT	44.9%	coding (298/324 nt)	PP_0048	hypothetical protein
	?	NC_002947	= 3971692	NA (NA)					intergenic (+31/‑349)	PP_3501/PP_3502	transposase/transposase
*	?	NC_002947	75072 =	142 (1.520)	9 (0.100)	8/240	NT	6.3%	coding (1138/1374 nt)	trkA	TrK potassium transporter NAD‑binding protein
	?	NC_002947	75100 =	132 (1.470)					coding (1110/1374 nt)	trkA	TrK potassium transporter NAD‑binding protein
*	?	NC_002947	86750 =	85 (0.910)	9 (0.110)	6/218	NT	11.4%	intergenic (‑33/+112)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
	?	NC_002947	86841 =	66 (0.810)					intergenic (‑124/+21)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
*	?	NC_002947	= 86765	85 (0.910)	8 (0.100)	8/218	NT	10.2%	intergenic (‑48/+97)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
	?	NC_002947	= 86824	66 (0.810)					intergenic (‑107/+38)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
*	?	NC_002947	= 90357	131 (1.400)	24 (0.280)	15/226	NT	16.8%	intergenic (+32/+90)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
	?	NC_002947	= 90414	120 (1.420)					intergenic (+89/+33)	PP_0079/PP_0080	transcriptional regulator/hypothetical protein
*	?	NC_002947	123904 =	113 (1.210)	6 (0.070)	5/236	NT	6.0%	coding (730/774 nt)	znuC	zinc ABC transporter ATP‑binding protein
	?	NC_002947	123939 =	83 (0.940)					coding (695/774 nt)	znuC	zinc ABC transporter ATP‑binding protein
*	?	NC_002947	127109 =	77 (0.830)	5 (0.050)	5/248	NT	6.2%	intergenic (‑19/+51)	thrB/PP_0122	homoserine kinase/hypothetical protein
	?	NC_002947	127135 =	76 (0.820)					intergenic (‑45/+25)	thrB/PP_0122	homoserine kinase/hypothetical protein
*	?	NC_002947	143265 =	84 (0.900)	8 (0.090)	5/240	NT	9.0%	coding (213/291 nt)	PP_5428	hypothetical protein
	?	NC_002947	143284 =	82 (0.920)					coding (232/291 nt)	PP_5428	hypothetical protein
*	?	NC_002947	156028 =	115 (1.230)	6 (0.070)	6/242	NT	5.1%	coding (348/798 nt)	ygdQ	transport protein
	?	NC_002947	156056 =	110 (1.220)					coding (320/798 nt)	ygdQ	transport protein
*	?	NC_002947	= 160332	104 (1.110)	10 (0.110)	6/244	NT	9.0%	coding (57/1956 nt)	PP_0149	hypothetical protein
	?	NC_002947	= 160378	100 (1.100)					coding (11/1956 nt)	PP_0149	hypothetical protein
*	?	NC_002947	= 161687	75 (0.800)	6 (0.070)	7/236	NT	7.5%	intergenic (‑182/+64)	PP_0152/PP_0153	hypothetical protein/hypothetical protein
	?	NC_002947	= 161703	77 (0.870)					intergenic (‑198/+48)	PP_0152/PP_0153	hypothetical protein/hypothetical protein
*	?	NC_002947	= 182013	105 (1.130)	44 (0.490) +TTTCG	15/240	NT	30.4%	intergenic (+2/+63)	PP_5SB/PP_0160	5S ribosomal RNA/ferrioxamine receptor
	?	NC_002947	= 1330518	NA (NA)					intergenic (+43/‑264)	PP_5SE/PP_1157	5S ribosomal RNA/acetolactate synthase
*	?	NC_002947	= 196250	167 (1.790)	10 (0.110)	6/240	NT	5.7%	coding (1756/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 196255	168 (1.880)					coding (1761/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	196532 =	NA (NA)	4 (0.040)	3/244	NT	12.0%	coding (2038/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	196574 =	30 (0.320)					coding (2080/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	= 197150	281 (3.010)	21 (0.230)	10/240	NT	7.2%	coding (2656/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 197155	270 (3.010)					coding (2661/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	= 202267	109 (1.170)	6 (0.070)	4/246	NT	5.6%	coding (7773/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 206283	95 (1.030)					coding (11789/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	205109 =	36 (0.390)	15 (0.170)	5/242	NT	18.5%	coding (10615/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	205721 =	97 (1.070)					coding (11227/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	= 208935	NA (NA)	10 (0.110)	6/240	NT	8.4%	coding (14441/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 210247	113 (1.210)					coding (15753/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	209102 =	NA (NA)	4 (0.040)	3/250	NT	100%	coding (14608/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	209737 =	0 (0.000)					coding (15243/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	= 226123	81 (0.870)	6 (0.070)	5/234	NT	6.7%	coding (349/819 nt)	PP_0174	hypothetical protein
	?	NC_002947	= 226140	92 (1.050)					coding (366/819 nt)	PP_0174	hypothetical protein
*	?	NC_002947	= 232937	97 (1.040)	6 (0.070)	5/234	NT	5.8%	coding (1036/1911 nt)	PP_0180	cytochrome c family protein
	?	NC_002947	= 232944	104 (1.190)					coding (1043/1911 nt)	PP_0180	cytochrome c family protein
*	?	NC_002947	= 235329	79 (0.850)	8 (0.090)	3/230	NT	8.8%	intergenic (+26/+99)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
	?	NC_002947	= 235390	93 (1.080)					intergenic (+87/+38)	PP_0183/argH	glutathione S‑transferase/argininosuccinate lyase
*	?	NC_002947	= 251781	82 (0.880)	5 (0.060)	5/236	NT	6.1%	intergenic (+22/‑40)	PP_0201/PP_5432	hypothetical protein/hypothetical protein
	?	NC_002947	= 251799	77 (0.870)					intergenic (+40/‑22)	PP_0201/PP_5432	hypothetical protein/hypothetical protein
*	?	NC_002947	261875 =	116 (1.240)	8 (0.090)	7/250	NT	6.3%	coding (357/966 nt)	PP_0210	phycobiliprotein
	?	NC_002947	261905 =	121 (1.300)					coding (387/966 nt)	PP_0210	phycobiliprotein
*	?	NC_002947	277165 =	139 (1.490)	14 (0.170)	12/220	NT	10.9%	coding (3/1221 nt)	PP_0223	DszC family monooxygenase
	?	NC_002947	277234 =	106 (1.290)					intergenic (‑67/+30)	PP_0223/PP_0224	DszC family monooxygenase/DszC family monooxygenase
*	?	NC_002947	= 278757	70 (0.750)	6 (0.080)	6/202	NT	8.5%	intergenic (‑252/+63)	PP_0224/sctC	DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein
	?	NC_002947	= 278780	73 (0.970)					intergenic (‑275/+40)	PP_0224/sctC	DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein
*	?	NC_002947	= 284699	108 (1.160)	6 (0.070)	6/240	NT	5.3%	coding (752/834 nt)	atsK	alpha‑ketoglutarate‑dependent sulfonate dioxygenase
	?	NC_002947	= 284711	109 (1.220)					coding (740/834 nt)	atsK	alpha‑ketoglutarate‑dependent sulfonate dioxygenase
*	?	NC_002947	295685 =	120 (1.290)	11 (0.130)	10/232	NT	8.2%	intergenic (+32/+110)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
	?	NC_002947	295774 =	136 (1.570)					intergenic (+121/+21)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
*	?	NC_002947	= 295713	124 (1.330)	19 (0.230)	12/222	NT	13.2%	intergenic (+60/+82)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
	?	NC_002947	= 295744	139 (1.680)					intergenic (+91/+51)	PP_0241/PP_0242	transporter/TetR family transcriptional regulator
*	?	NC_002947	298448 =	106 (1.140)	6 (0.070)	6/240	NT	5.9%	coding (94/384 nt)	PP_0244	hypothetical protein
	?	NC_002947	298495 =	90 (1.000)					coding (47/384 nt)	PP_0244	hypothetical protein
*	?	NC_002947	317421 =	94 (1.010)	5 (0.060)	5/236	NT	5.5%	coding (512/1407 nt)	dctD‑I	C4‑dicarboxylate transport transcriptional regulator
	?	NC_002947	317465 =	84 (0.950)					coding (468/1407 nt)	dctD‑I	C4‑dicarboxylate transport transcriptional regulator
*	?	NC_002947	342930 =	87 (0.930)	5 (0.060)	5/234	NT	5.7%	intergenic (+58/+74)	gabP‑I/PP_5439	gamma‑aminobutyrate permease/hypothetical protein
	?	NC_002947	342979 =	85 (0.970)					intergenic (+107/+25)	gabP‑I/PP_5439	gamma‑aminobutyrate permease/hypothetical protein
*	?	NC_002947	= 359665	101 (1.080)	21 (0.240)	12/234	NT	19.6%	intergenic (+22/+98)	gbdR/PP_0299	AraC family transcriptional regulator/hypothetical protein
	?	NC_002947	= 359732	78 (0.890)					intergenic (+89/+31)	gbdR/PP_0299	AraC family transcriptional regulator/hypothetical protein
*	?	NC_002947	359677 =	100 (1.070)	25 (0.280)	17/236	NT	22.6%	intergenic (+34/+86)	gbdR/PP_0299	AraC family transcriptional regulator/hypothetical protein
	?	NC_002947	359721 =	77 (0.870)					intergenic (+78/+42)	gbdR/PP_0299	AraC family transcriptional regulator/hypothetical protein
*	?	NC_002947	363530 =	76 (0.810)	6 (0.070)	6/216	NT	8.8%	intergenic (‑45/+122)	lcdH/PP_0303	L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme
	?	NC_002947	363623 =	58 (0.720)					intergenic (‑138/+29)	lcdH/PP_0303	L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme
*	?	NC_002947	372622 =	148 (1.590)	9 (0.100)	8/232	NT	6.2%	intergenic (+39/‑140)	dgcA/dgcB	dimethylglycine dehydrogenase subunit/dimethylglycine dehydrogenase subunit
	?	NC_002947	372699 =	135 (1.560)					intergenic (+116/‑63)	dgcA/dgcB	dimethylglycine dehydrogenase subunit/dimethylglycine dehydrogenase subunit
*	?	NC_002947	380836 =	45 (0.480)	9 (0.120)	8/204	NT	22.9%	intergenic (+23/+86)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
	?	NC_002947	380916 =	24 (0.320)					intergenic (+103/+6)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
*	?	NC_002947	= 380858	36 (0.390)	13 (0.170)	10/204	NT	32.8%	intergenic (+45/+64)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
	?	NC_002947	= 380892	24 (0.320)					intergenic (+79/+30)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
*	?	NC_002947	= 391267	95 (1.020)	7 (0.080)	6/236	NT	7.1%	coding (1538/3015 nt)	soxA	sarcosine oxidase subunit alpha
	?	NC_002947	= 391277	94 (1.070)					coding (1548/3015 nt)	soxA	sarcosine oxidase subunit alpha
*	?	NC_002947	= 414024	43 (0.460)	6 (0.080)	6/194	NT	14.1%	intergenic (+41/‑162)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
	?	NC_002947	= 414054	40 (0.550)					intergenic (+71/‑132)	glnE/waaF	glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
*	?	NC_002947	= 430692	132 (1.410)	7 (0.080)	5/242	NT	5.2%	coding (1625/1938 nt)	PP_0354	CBS domain‑containing protein
	?	NC_002947	= 430723	126 (1.390)					coding (1594/1938 nt)	PP_0354	CBS domain‑containing protein
*	?	NC_002947	436353 =	79 (0.850)	4 (0.050)	4/232	NT	5.4%	intergenic (+183/+50)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein
	?	NC_002947	436386 =	68 (0.790)					intergenic (+216/+17)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein
*	?	NC_002947	= 436361	76 (0.810)	6 (0.070)	6/232	NT	8.0%	intergenic (+191/+42)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein
	?	NC_002947	= 436376	68 (0.790)					intergenic (+206/+27)	PP_0357/PP_0358	ACT domain‑containing protein/membrane protein
*	?	NC_002947	445062 =	70 (0.750)	11 (0.150)	10/196	NT	18.2%	intergenic (+32/‑256)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
	?	NC_002947	445155 =	44 (0.600)					intergenic (+125/‑163)	PP_0367/PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
*	?	NC_002947	447140 =	80 (0.860)	10 (0.120)	6/228	NT	11.4%	intergenic (+17/‑285)	PP_0368/PP_0369	acyl‑CoA dehydrogenase/diguanylate cyclase
	?	NC_002947	447174 =	82 (0.960)					intergenic (+51/‑251)	PP_0368/PP_0369	acyl‑CoA dehydrogenase/diguanylate cyclase
*	?	NC_002947	= 447150	81 (0.870)	9 (0.110)	9/228	NT	10.4%	intergenic (+27/‑275)	PP_0368/PP_0369	acyl‑CoA dehydrogenase/diguanylate cyclase
	?	NC_002947	= 447162	82 (0.960)					intergenic (+39/‑263)	PP_0368/PP_0369	acyl‑CoA dehydrogenase/diguanylate cyclase
*	?	NC_002947	= 450920	93 (1.000)	8 (0.090)	9/228	NT	8.7%	noncoding (114/127 nt)	PP_mr05	RsmY ncRNA
	?	NC_002947	= 450924	84 (0.990)					noncoding (118/127 nt)	PP_mr05	RsmY ncRNA
*	?	NC_002947	= 478293	42 (0.450)	5 (0.070)	4/190	NT	12.1%	intergenic (+38/+72)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	= 478328	41 (0.580)					intergenic (+73/+37)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
*	?	NC_002947	499197 =	76 (0.810)	5 (0.070)	5/202	NT	10.1%	intergenic (+38/‑258)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
	?	NC_002947	499284 =	28 (0.370)					intergenic (+125/‑171)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
*	?	NC_002947	= 511936	113 (1.210)	6 (0.070)	6/228	NT	5.3%	intergenic (+73/‑75)	trpC/PP_0423	indole‑3‑glycerol phosphate synthase/hypothetical protein
	?	NC_002947	= 511954	110 (1.290)					intergenic (+91/‑57)	trpC/PP_0423	indole‑3‑glycerol phosphate synthase/hypothetical protein
*	?	NC_002947	= 529666	NA (NA)	13 (0.140)	11/242	NT	NA	noncoding (2901/2902 nt)	PP_23SC	23S ribosomal RNA
	?	NC_002947	= 529693	NA (NA)					intergenic (+26/‑94)	PP_23SC/PP_5SC	23S ribosomal RNA/5S ribosomal RNA
*	?	NC_002947	530833 =	105 (1.130)	5 (0.050)	4/244	NT	5.0%	coding (744/960 nt)	birA	bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA
	?	NC_002947	530860 =	87 (0.960)					coding (771/960 nt)	birA	bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA
*	?	NC_002947	582803 =	108 (1.160)	6 (0.070)	5/242	NT	5.5%	coding (666/1923 nt)	selB	selenocysteyl‑tRNA‑specific translation elongation factor
	?	NC_002947	582824 =	100 (1.110)					coding (687/1923 nt)	selB	selenocysteyl‑tRNA‑specific translation elongation factor
*	?	NC_002947	= 590706	87 (0.930)	6 (0.070)	7/238	NT	6.2%	coding (827/885 nt)	PP_0500	dTDP‑4‑rhamnose reductase‑like protein
	?	NC_002947	= 590722	98 (1.100)					coding (843/885 nt)	PP_0500	dTDP‑4‑rhamnose reductase‑like protein
*	?	NC_002947	594774 =	133 (1.430)	13 (0.150)	6/228	NT	10.0%	intergenic (‑10/+117)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease
	?	NC_002947	594859 =	114 (1.340)					intergenic (‑95/+32)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease
*	?	NC_002947	= 601141	101 (1.080)	5 (0.060)	4/232	NT	5.1%	coding (489/1137 nt)	ribD	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase
	?	NC_002947	= 601161	93 (1.070)					coding (509/1137 nt)	ribD	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase
*	?	NC_002947	608696 =	81 (0.870)	6 (0.070)	6/240	NT	6.9%	coding (564/813 nt)	PP_0524	cobalamin‑binding protein HutB
	?	NC_002947	608718 =	83 (0.930)					coding (586/813 nt)	PP_0524	cobalamin‑binding protein HutB
*	?	NC_002947	= 614300	21 (0.230)	9 (0.130)	6/188	NT	29.6%	intergenic (‑116/+62)	dxs/ispA	1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase
	?	NC_002947	= 614316	27 (0.380)					intergenic (‑132/+46)	dxs/ispA	1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase
*	?	NC_002947	= 652785	76 (0.810)	27 (0.340)	21/210	NT	45.8%	coding (1961/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	= 4808204	0 (0.000)					intergenic (‑268/‑287)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
*	?	NC_002947	655948 =	101 (1.080)	6 (0.070)	6/240	NT	5.7%	coding (398/1356 nt)	PP_0563	two‑component system response regulator
	?	NC_002947	655975 =	102 (1.140)					coding (371/1356 nt)	PP_0563	two‑component system response regulator
*	?	NC_002947	662507 =	143 (1.530)	8 (0.090)	7/240	NT	5.6%	coding (451/1338 nt)	PP_0569	MATE efflux family protein
	?	NC_002947	662530 =	135 (1.510)					coding (428/1338 nt)	PP_0569	MATE efflux family protein
*	?	NC_002947	668061 =	67 (0.720)	5 (0.070)	5/202	NT	8.7%	intergenic (+22/+130)	yfhM/PP_0571	lipoprotein/membrane protein
	?	NC_002947	668178 =	51 (0.680)					intergenic (+139/+13)	yfhM/PP_0571	lipoprotein/membrane protein
*	?	NC_002947	= 720054	75 (0.800)	4 (0.040)	4/244	NT	5.3%	coding (1145/1278 nt)	PP_0614	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
	?	NC_002947	= 720075	69 (0.760)					coding (1124/1278 nt)	PP_0614	bifunctional N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase
*	?	NC_002947	726899 =	89 (0.950)	6 (0.070)	5/222	NT	7.0%	intergenic (‑143/+124)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
	?	NC_002947	726986 =	81 (0.980)					intergenic (‑230/+37)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 726912	79 (0.850)	6 (0.070) +TT	6/246	NT	7.3%	intergenic (‑156/+111)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
	?	NC_002947	5571473 =	77 (0.830)					intergenic (+44/+97)	queG/yicG	epoxyqueuosine reductase/inner membrane protein
*	?	NC_002947	= 733866	88 (0.940)	4 (0.040) +GTTC	4/242	NT	5.2%	intergenic (+33/+158)	PP_t11/ndh	tRNA‑Lys/NADH dehydrogenase
	?	NC_002947	= 1402488	63 (0.680)					intergenic (+1/+93)	PP_t13/PP_1227	tRNA‑Lys/membrane protein
*	?	NC_002947	741473 =	NA (NA)	8 (0.090)	5/242	NT	6.9%	intergenic (+70/‑430)	PP_t12/PP_0635	tRNA‑Thr/group II intron‑encoding maturase
	?	NC_002947	2069206 =	111 (1.190)					intergenic (+10/‑464)	PP_t19/PP_1846	tRNA‑Ser/group II intron‑encoding maturase
*	?	NC_002947	= 741972	NA (NA)	4 (0.040)	4/242	NT	NA	coding (70/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	= 741999	NA (NA)					coding (97/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	742918 =	NA (NA)	13 (0.150)	8/238	NT	NA	coding (1016/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	742948 =	NA (NA)					coding (1046/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	= 743268	NA (NA)	5 (0.060)	7/242	NT	NA	coding (1366/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	= 743278	NA (NA)					coding (1376/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	745214 =	NA (NA)	8 (0.090)	6/238	NT	NA	coding (1288/1533 nt)	PP_0637	transposase
	?	NC_002947	745243 =	NA (NA)					coding (1259/1533 nt)	PP_0637	transposase
*	?	NC_002947	= 835081	74 (0.790)	6 (0.070)	5/238	NT	7.3%	coding (1001/1713 nt)	PP_0718	sulfate transporter
	?	NC_002947	= 835098	82 (0.920)					coding (984/1713 nt)	PP_0718	sulfate transporter
*	?	NC_002947	= 836215	79 (0.850)	9 (0.110)	7/228	NT	10.7%	intergenic (‑134/+43)	PP_0718/ychF	sulfate transporter/ribosome‑associated potassium‑dependent ATP/GTPase
	?	NC_002947	= 836225	78 (0.920)					intergenic (‑144/+33)	PP_0718/ychF	sulfate transporter/ribosome‑associated potassium‑dependent ATP/GTPase
*	?	NC_002947	= 867921	102 (1.090)	14 (0.150)	8/244	NT	13.6%	intergenic (+16/+161)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
	?	NC_002947	= 868013	78 (0.860)					intergenic (+108/+69)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
*	?	NC_002947	867938 =	102 (1.090)	9 (0.110)	8/220	NT	9.6%	intergenic (+33/+144)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
	?	NC_002947	867998 =	79 (0.960)					intergenic (+93/+84)	PP_0750/mqo‑I	hypothetical protein/malate:quinone oxidoreductase
*	?	NC_002947	917692 =	91 (0.980)	9 (0.110)	6/228	NT	10.1%	intergenic (‑123/+76)	PP_0798/opdC	GGDEF domain‑containing protein/histidine‑specific outer membrane porin D
	?	NC_002947	917754 =	78 (0.920)					intergenic (‑185/+14)	PP_0798/opdC	GGDEF domain‑containing protein/histidine‑specific outer membrane porin D
*	?	NC_002947	= 941373	117 (1.250)	6 (0.070)	6/244	NT	5.4%	coding (4252/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	= 941406	98 (1.080)					coding (4219/18933 nt)	PP_0806	surface adhesion protein
*	?	NC_002947	= 959783	95 (1.020)	7 (0.080)	6/236	NT	6.8%	coding (49/411 nt)	PP_0821	hypothetical protein
	?	NC_002947	= 959790	102 (1.160)					coding (56/411 nt)	PP_0821	hypothetical protein
*	?	NC_002947	967853 =	102 (1.090)	7 (0.090)	5/220	NT	7.2%	intergenic (‑29/+139)	PP_0830/PP_0831	acetyltransferase/hypothetical protein
	?	NC_002947	967944 =	90 (1.100)					intergenic (‑120/+48)	PP_0830/PP_0831	acetyltransferase/hypothetical protein
*	?	NC_002947	1025270 =	72 (0.770)	6 (0.080)	4/196	NT	12.8%	intergenic (‑121/+108)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	1025363 =	25 (0.340)					intergenic (‑214/+15)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
*	?	NC_002947	1037774 =	61 (0.650)	17 (0.220)	9/204	NT	29.9%	intergenic (+16/+100)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
	?	NC_002947	1037852 =	30 (0.390)					intergenic (+94/+22)	PP_0896/PP_0897	carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase
*	?	NC_002947	= 1064993	93 (1.000)	19 (0.230)	10/224	NT	16.8%	intergenic (+47/+66)	PP_0922/PP_0923	hypothetical protein/acyltransferase
	?	NC_002947	= 1065009	105 (1.260)					intergenic (+63/+50)	PP_0922/PP_0923	hypothetical protein/acyltransferase
*	?	NC_002947	1102423 =	106 (1.140)	5 (0.060)	5/236	NT	5.0%	coding (504/648 nt)	ttg2D	toluene tolerance protein
	?	NC_002947	1102458 =	89 (1.010)					coding (539/648 nt)	ttg2D	toluene tolerance protein
*	?	NC_002947	1102886 =	92 (0.990)	10 (0.110)	7/234	NT	10.4%	intergenic (+20/‑98)	ttg2E/ttg2F	toluene‑tolerance protein/BolA family protein
	?	NC_002947	1102932 =	86 (0.980)					intergenic (+66/‑52)	ttg2E/ttg2F	toluene‑tolerance protein/BolA family protein
*	?	NC_002947	= 1114899	31 (0.330)	11 (0.150)	8/200	NT	32.4%	intergenic (‑88/+91)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	= 1114925	21 (0.280)					intergenic (‑114/+65)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
*	?	NC_002947	1119638 =	100 (1.070)	11 (0.120)	9/242	NT	10.5%	coding (626/1494 nt)	pepA	cytosol aminopeptidase
	?	NC_002947	1119667 =	91 (1.010)					coding (597/1494 nt)	pepA	cytosol aminopeptidase
*	?	NC_002947	1119766 =	88 (0.940)	11 (0.120)	10/236	NT	11.8%	coding (498/1494 nt)	pepA	cytosol aminopeptidase
	?	NC_002947	1119787 =	81 (0.920)					coding (477/1494 nt)	pepA	cytosol aminopeptidase
*	?	NC_002947	1126598 =	44 (0.470)	18 (0.230)	12/208	NT	31.4%	intergenic (‑47/+103)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
	?	NC_002947	1126656 =	42 (0.540)					intergenic (‑105/+45)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
*	?	NC_002947	= 1126618	47 (0.500)	7 (0.090)	6/208	NT	14.7%	intergenic (‑67/+83)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
	?	NC_002947	= 1126634	42 (0.540)					intergenic (‑83/+67)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
*	?	NC_002947	1149525 =	90 (0.960)	11 (0.120)	10/236	NT	11.2%	coding (235/513 nt)	PP_1008	RNA polymerase subunit sigma‑24
	?	NC_002947	1149552 =	89 (1.010)					coding (208/513 nt)	PP_1008	RNA polymerase subunit sigma‑24
*	?	NC_002947	1149925 =	104 (1.110)	6 (0.070)	5/234	NT	6.3%	intergenic (‑166/+91)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	1150004 =	81 (0.930)					intergenic (‑245/+12)	PP_1008/gapA	RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
*	?	NC_002947	1156311 =	57 (0.610)	16 (0.200)	10/218	NT	25.3%	intergenic (+8/‑208)	PP_1013/yihS	sensor histidine kinase/aldose‑ketose isomerase
	?	NC_002947	1156418 =	45 (0.550)					intergenic (+115/‑101)	PP_1013/yihS	sensor histidine kinase/aldose‑ketose isomerase
*	?	NC_002947	1159167 =	128 (1.370)	6 (0.070)	6/230	NT	5.5%	intergenic (+7/‑127)	gtsA/gtsB	mannose/glucose ABC transporter substrate‑binding protein/ABC transporter permease
	?	NC_002947	1159256 =	87 (1.010)					intergenic (+96/‑38)	gtsA/gtsB	mannose/glucose ABC transporter substrate‑binding protein/ABC transporter permease
*	?	NC_002947	= 1170760	86 (0.920)	6 (0.070)	5/228	NT	6.9%	intergenic (‑345/+88)	leuA/PP_1026	2‑isopropylmalate synthase/M23/M37 family peptidase
	?	NC_002947	= 1170822	83 (0.980)					intergenic (‑407/+26)	leuA/PP_1026	2‑isopropylmalate synthase/M23/M37 family peptidase
*	?	NC_002947	= 1202705	83 (0.890)	5 (0.060)	5/242	NT	5.6%	coding (528/1089 nt)	xcpY	type II secretion pathway protein XcpY
	?	NC_002947	= 1202731	87 (0.960)					coding (554/1089 nt)	xcpY	type II secretion pathway protein XcpY
*	?	NC_002947	= 1207565	97 (1.040)	5 (0.060)	5/238	NT	5.0%	coding (1442/3150 nt)	PP_1058	hypothetical protein
	?	NC_002947	= 1207574	97 (1.090)					coding (1433/3150 nt)	PP_1058	hypothetical protein
*	?	NC_002947	1217615 =	81 (0.870)	4 (0.050)	4/236	NT	5.2%	coding (801/918 nt)	metR‑I	homocysteine‑binding DNA‑binding transcriptional regulator
	?	NC_002947	1217648 =	69 (0.780)					coding (768/918 nt)	metR‑I	homocysteine‑binding DNA‑binding transcriptional regulator
*	?	NC_002947	1225139 =	82 (0.880)	5 (0.060)	4/240	NT	6.1%	coding (292/747 nt)	gltJ	glutamate/aspartate ABC transporter permease
	?	NC_002947	1225162 =	74 (0.830)					coding (269/747 nt)	gltJ	glutamate/aspartate ABC transporter permease
*	?	NC_002947	1246670 =	87 (0.930)	4 (0.050)	4/210	NT	5.2%	intergenic (+65/‑306)	PP_1087/argG	OmpA family outer membrane protein/argininosuccinate synthase
	?	NC_002947	1246736 =	72 (0.920)					intergenic (+131/‑240)	PP_1087/argG	OmpA family outer membrane protein/argininosuccinate synthase
*	?	NC_002947	= 1246689	87 (0.930)	4 (0.050)	4/210	NT	5.2%	intergenic (+84/‑287)	PP_1087/argG	OmpA family outer membrane protein/argininosuccinate synthase
	?	NC_002947	= 1246715	72 (0.920)					intergenic (+110/‑261)	PP_1087/argG	OmpA family outer membrane protein/argininosuccinate synthase
*	?	NC_002947	= 1264558	84 (0.900)	6 (0.070)	6/238	NT	6.7%	coding (868/1017 nt)	PP_1106	hypothetical protein
	?	NC_002947	= 1264577	88 (0.990)					coding (849/1017 nt)	PP_1106	hypothetical protein
*	?	NC_002947	1296580 =	NA (NA)	18 (0.210)	18/232	NT	NA	intergenic (‑327/‑239)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
	?	NC_002947	1296616 =	NA (NA)					intergenic (‑363/‑203)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
*	?	NC_002947	1296790 =	NA (NA)	5 (0.060)	3/236	NT	NA	intergenic (‑537/‑29)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
	?	NC_002947	1296828 =	NA (NA)					coding (10/1329 nt)	PP_1133	transposase
*	?	NC_002947	= 1298078	NA (NA)	20 (0.220)	9/240	NT	NA	coding (1260/1329 nt)	PP_1133	transposase
	?	NC_002947	= 1298101	NA (NA)					coding (1283/1329 nt)	PP_1133	transposase
*	?	NC_002947	= 1311725	72 (0.770)	8 (0.100)	8/224	NT	11.1%	intergenic (‑187/+91)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
	?	NC_002947	= 1311784	64 (0.770)					intergenic (‑246/+32)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
*	?	NC_002947	= 1331999	NA (NA)	8 (0.090)	5/242	NT	6.8%	coding (1218/1644 nt)	PP_1157	acetolactate synthase
	?	NC_002947	= 1332043	114 (1.220)					coding (1262/1644 nt)	PP_1157	acetolactate synthase
*	?	NC_002947	1356014 =	78 (0.840)	6 (0.070)	6/240	NT	8.1%	intergenic (+275/‑117)	PP_1180/PP_1181	hypothetical protein/two‑component system response regulator
	?	NC_002947	1356073 =	61 (0.680)					intergenic (+334/‑58)	PP_1180/PP_1181	hypothetical protein/two‑component system response regulator
*	?	NC_002947	1360309 =	85 (0.910)	6 (0.070)	5/238	NT	7.2%	coding (169/606 nt)	oprH	outer membrane protein H1
	?	NC_002947	1360333 =	73 (0.820)					coding (193/606 nt)	oprH	outer membrane protein H1
*	?	NC_002947	1371738 =	76 (0.810)	4 (0.050)	4/228	NT	6.0%	intergenic (+5/+67)	PP_1196/rimO	hypothetical protein/ribosomal protein S12 methylthiotransferase
	?	NC_002947	1371789 =	55 (0.650)					intergenic (+56/+16)	PP_1196/rimO	hypothetical protein/ribosomal protein S12 methylthiotransferase
*	?	NC_002947	1380537 =	81 (0.870)	4 (0.040) +AAG	4/244	NT	5.5%	intergenic (‑257/+5)	PP_1202/PP_t67	phospholipids modification protein/tRNA‑Met
	?	NC_002947	1380715 =	61 (0.650)					intergenic (‑97/+38)	PP_t67/PP_t66	tRNA‑Met/tRNA‑Met
*	?	NC_002947	1392884 =	52 (0.560)	3 (0.050)	4/176	NT	10.1%	intergenic (+48/‑138)	PP_1214/ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
	?	NC_002947	1392984 =	17 (0.260)					intergenic (+148/‑38)	PP_1214/ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
*	?	NC_002947	= 1409101	70 (0.750)	14 (0.180)	9/214	NT	17.8%	intergenic (+39/‑236)	PP_1230/nadA	hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit
	?	NC_002947	= 1409127	69 (0.860)					intergenic (+65/‑210)	PP_1230/nadA	hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit
*	?	NC_002947	1419553 =	23 (0.250)	11 (0.160)	8/186	NT	46.7%	intergenic (‑36/+101)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	1419647 =	8 (0.120)					intergenic (‑130/+7)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1419584	21 (0.230)	12 (0.170)	11/186	NT	50.4%	intergenic (‑67/+70)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	= 1419614	8 (0.120)					intergenic (‑97/+40)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
*	?	NC_002947	1436018 =	91 (0.980)	5 (0.060)	5/238	NT	5.1%	intergenic (‑48/+105)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
	?	NC_002947	1436109 =	100 (1.130)					intergenic (‑139/+14)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
*	?	NC_002947	1443111 =	55 (0.590)	10 (0.130)	9/200	NT	23.8%	intergenic (‑42/+134)	ghrB/PP_1262	2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator
	?	NC_002947	1443179 =	20 (0.270)					intergenic (‑110/+66)	ghrB/PP_1262	2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator
*	?	NC_002947	= 1444641	135 (1.450)	7 (0.080)	6/240	NT	5.3%	coding (258/1530 nt)	PP_1263	fusaric acid resistance protein
	?	NC_002947	= 1444670	121 (1.350)					coding (287/1530 nt)	PP_1263	fusaric acid resistance protein
*	?	NC_002947	= 1472865	79 (0.850)	5 (0.060)	5/232	NT	6.1%	intergenic (‑32/+46)	alg8/algD	glycosyltransferase Alg8/GDP‑mannose 6‑dehydrogenase
	?	NC_002947	= 1472891	80 (0.920)					intergenic (‑58/+20)	alg8/algD	glycosyltransferase Alg8/GDP‑mannose 6‑dehydrogenase
*	?	NC_002947	1487013 =	14 (0.150)	24 (0.340)	16/190	NT	63.5%	intergenic (+22/+108)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	1487103 =	17 (0.240)					intergenic (+112/+18)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	= 1487042	15 (0.160)	6 (0.080)	5/190	NT	29.7%	intergenic (+51/+79)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
	?	NC_002947	= 1487072	17 (0.240)					intergenic (+81/+49)	yhdZ/degS	amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS
*	?	NC_002947	= 1491916	89 (0.950)	8 (0.090)	7/230	NT	8.6%	coding (1572/1902 nt)	cysNC	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase
	?	NC_002947	= 1491933	89 (1.040)					coding (1589/1902 nt)	cysNC	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase
*	?	NC_002947	1499410 =	32 (0.340)	4 (0.050)	4/238	NT	13.5%	coding (1330/1350 nt)	trpS	tryptophan‑‑tRNA ligase
	?	NC_002947	1499440 =	21 (0.240)					intergenic (+10/‑156)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	1499443 =	22 (0.240)	7 (0.090)	6/204	NT	28.6%	intergenic (+13/‑153)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	1499526 =	17 (0.220)					intergenic (+96/‑70)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	= 1499465	17 (0.180)	6 (0.080)	6/204	NT	28.0%	intergenic (+35/‑131)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 1499502	17 (0.220)					intergenic (+72/‑94)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	= 1511127	100 (1.070)	6 (0.070)	5/236	NT	5.9%	pseudogene (482/1851 nt)	PP_1325	putative lipoprotein
	?	NC_002947	= 1511141	98 (1.110)					pseudogene (468/1851 nt)	PP_1325	putative lipoprotein
*	?	NC_002947	= 1531811	57 (0.610)	7 (0.090)	7/202	NT	14.4%	coding (107/630 nt)	PP_1344	hypothetical protein
	?	NC_002947	= 1531859	37 (0.490)					coding (59/630 nt)	PP_1344	hypothetical protein
*	?	NC_002947	= 1540732	75 (0.800)	6 (0.070)	5/236	NT	7.6%	coding (835/918 nt)	panE	2‑dehydropantoate 2‑reductase
	?	NC_002947	= 1540752	76 (0.860)					coding (815/918 nt)	panE	2‑dehydropantoate 2‑reductase
*	?	NC_002947	= 1540888	75 (0.800)	6 (0.070)	6/236	NT	7.1%	coding (679/918 nt)	panE	2‑dehydropantoate 2‑reductase
	?	NC_002947	= 1540906	86 (0.980)					coding (661/918 nt)	panE	2‑dehydropantoate 2‑reductase
*	?	NC_002947	= 1575231	79 (0.850)	10 (0.110)	8/238	NT	12.1%	intergenic (‑175/+35)	pcaP/galP‑II	porin/porin‑like protein
	?	NC_002947	= 1575253	70 (0.790)					intergenic (‑197/+13)	pcaP/galP‑II	porin/porin‑like protein
*	?	NC_002947	1593399 =	111 (1.190)	8 (0.120) +38 bp	10/174	NT	11.9%	intergenic (‑79/+41)	PP_1398/PP_1399	hypothetical protein/hypothetical protein
	?	NC_002947	1593500 =	59 (0.630)					coding (345/405 nt)	PP_1399	hypothetical protein
*	?	NC_002947	1613744 =	73 (0.780)	4 (0.050)	4/236	NT	5.1%	coding (904/1683 nt)	ushA	5'‑nucleotidase/2',3'‑cyclic phosphodiesterase
	?	NC_002947	1613794 =	79 (0.900)					coding (854/1683 nt)	ushA	5'‑nucleotidase/2',3'‑cyclic phosphodiesterase
*	?	NC_002947	= 1637246	103 (1.100)	7 (0.080)	6/244	NT	6.4%	coding (654/741 nt)	pdxJ	pyridoxine 5'‑phosphate synthase
	?	NC_002947	= 1637264	103 (1.130)					coding (672/741 nt)	pdxJ	pyridoxine 5'‑phosphate synthase
*	?	NC_002947	1665733 =	109 (1.170)	7 (0.080)	7/234	NT	6.5%	coding (177/1206 nt)	PP_1459	CBS domain‑containing protein
	?	NC_002947	1665766 =	98 (1.120)					coding (144/1206 nt)	PP_1459	CBS domain‑containing protein
*	?	NC_002947	= 1666839	87 (0.930)	6 (0.070)	6/218	NT	6.8%	intergenic (‑69/‑202)	PP_1460/ffh	membrane protein/signal recognition particle GTPase subunit
	?	NC_002947	= 1666868	89 (1.090)					intergenic (‑98/‑173)	PP_1460/ffh	membrane protein/signal recognition particle GTPase subunit
*	?	NC_002947	1719958 =	95 (1.020)	6 (0.070)	5/244	NT	6.4%	coding (95/642 nt)	PP_1515	Transcriptional regulator, tetR family
	?	NC_002947	1720004 =	84 (0.920)					coding (49/642 nt)	PP_1515	Transcriptional regulator, tetR family
*	?	NC_002947	= 1722478	88 (0.940)	6 (0.070)	6/242	NT	6.6%	coding (1069/3066 nt)	PP_1517	RND family transporter
	?	NC_002947	= 1722503	85 (0.940)					coding (1094/3066 nt)	PP_1517	RND family transporter
*	?	NC_002947	1731205 =	37 (0.400)	12 (0.170)	10/194	NT	38.9%	intergenic (‑76/+115)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	1731297 =	9 (0.120)					intergenic (‑168/+23)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	= 1731759	88 (0.940)	5 (0.060)	5/240	NT	5.6%	coding (2153/2592 nt)	PP_1526	beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	= 1731801	83 (0.930)					coding (2111/2592 nt)	PP_1526	beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	1738029 =	73 (0.780)	12 (0.150)	12/216	NT	13.1%	coding (32/348 nt)	yffB	glutathione‑dependent thiol reductase
	?	NC_002947	= 1777443	96 (1.190)					intergenic (+135/+157)	PP_5476/PP_1585	hypothetical protein/antidote protein
*	?	NC_002947	1754893 =	136 (1.460)	7 (0.080)	6/248	NT	5.3%	coding (260/342 nt)	PP_1557	hypothetical protein
	?	NC_002947	1754919 =	114 (1.230)					coding (286/342 nt)	PP_1557	hypothetical protein
*	?	NC_002947	1775392 =	78 (0.840)	5 (0.060)	3/242	NT	6.3%	coding (530/1077 nt)	PP_1582	hypothetical protein
	?	NC_002947	1775419 =	72 (0.800)					coding (557/1077 nt)	PP_1582	hypothetical protein
*	?	NC_002947	= 1783247	133 (1.430)	7 (0.080)	5/244	NT	5.3%	coding (872/2703 nt)	glnD	uridylyltransferase
	?	NC_002947	= 1783270	120 (1.320)					coding (849/2703 nt)	glnD	uridylyltransferase
*	?	NC_002947	1787081 =	73 (0.780)	4 (0.050)	4/238	NT	6.2%	intergenic (+6/‑176)	tsf/pyrH	elongation factor Ts/uridylate kinase
	?	NC_002947	1787143 =	51 (0.570)					intergenic (+68/‑114)	tsf/pyrH	elongation factor Ts/uridylate kinase
*	?	NC_002947	= 1789697	108 (1.160)	9 (0.100)	8/236	NT	8.0%	coding (373/816 nt)	cdsA	CTP:phosphatidate cytidyltransferase
	?	NC_002947	= 1789716	104 (1.180)					coding (392/816 nt)	cdsA	CTP:phosphatidate cytidyltransferase
*	?	NC_002947	= 1792255	71 (0.760)	4 (0.050)	4/238	NT	5.3%	coding (863/1359 nt)	rseP	regulatory intramembrane protein RIP
	?	NC_002947	= 1792285	76 (0.860)					coding (893/1359 nt)	rseP	regulatory intramembrane protein RIP
*	?	NC_002947	1798196 =	78 (0.840)	12 (0.140)	9/238	NT	14.0%	coding (77/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
	?	NC_002947	1798247 =	73 (0.820)					coding (128/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
*	?	NC_002947	1798642 =	106 (1.140)	6 (0.070)	5/240	NT	5.7%	coding (523/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
	?	NC_002947	1798676 =	98 (1.090)					coding (557/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
*	?	NC_002947	= 1799104	80 (0.860)	6 (0.070)	4/236	NT	6.9%	coding (985/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
	?	NC_002947	= 1799128	86 (0.980)					coding (1009/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
*	?	NC_002947	= 1799915	65 (0.700)	10 (0.130)	6/204	NT	14.9%	intergenic (+43/‑144)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
	?	NC_002947	= 1799957	61 (0.800)					intergenic (+85/‑102)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
*	?	NC_002947	= 1800438	119 (1.280)	8 (0.090)	6/242	NT	6.7%	coding (380/3525 nt)	dnaEA	DNA polymerase III subunit alpha
	?	NC_002947	= 1800462	109 (1.210)					coding (404/3525 nt)	dnaEA	DNA polymerase III subunit alpha
*	?	NC_002947	1838124 =	106 (1.140)	14 (0.170)	14/222	NT	13.9%	intergenic (+29/+75)	PP_1642/PP_1643	hypothetical protein/membrane protein
	?	NC_002947	1838184 =	80 (0.970)					intergenic (+89/+15)	PP_1642/PP_1643	hypothetical protein/membrane protein
*	?	NC_002947	1842839 =	96 (1.030)	7 (0.080)	6/232	NT	7.7%	coding (1997/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	1842873 =	79 (0.910)					coding (1963/2754 nt)	gacS	sensor protein GacS
*	?	NC_002947	= 1868820	105 (1.130)	6 (0.070)	5/242	NT	5.7%	coding (892/1296 nt)	cobB	cobyrinate a,c‑diamide synthase
	?	NC_002947	= 1868853	98 (1.080)					coding (925/1296 nt)	cobB	cobyrinate a,c‑diamide synthase
*	?	NC_002947	1899260 =	90 (0.960)	11 (0.130)	8/220	NT	13.7%	intergenic (+288/‑232)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	1899320 =	59 (0.720)					intergenic (+348/‑172)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	1899413 =	99 (1.060)	6 (0.070)	6/230	NT	6.1%	intergenic (+441/‑79)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	1899467 =	94 (1.090)					intergenic (+495/‑25)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
*	?	NC_002947	1906724 =	54 (0.580)	10 (0.140)	5/198	NT	24.2%	intergenic (+22/+106)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
	?	NC_002947	1906818 =	20 (0.270)					intergenic (+116/+12)	nirD/PP_1707	nitrite reductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
*	?	NC_002947	1919926 =	86 (0.920)	5 (0.050)	4/244	NT	5.7%	coding (573/2115 nt)	prc	tail‑specific protease Prc
	?	NC_002947	1919969 =	82 (0.900)					coding (530/2115 nt)	prc	tail‑specific protease Prc
*	?	NC_002947	= 1920562	78 (0.840)	4 (0.050)	4/230	NT	5.2%	intergenic (‑64/‑43)	prc/PP_1720	tail‑specific protease Prc/alcohol dehydrogenase
	?	NC_002947	= 1920567	75 (0.870)					intergenic (‑69/‑38)	prc/PP_1720	tail‑specific protease Prc/alcohol dehydrogenase
*	?	NC_002947	1923957 =	107 (1.150)	6 (0.070)	6/240	NT	5.6%	coding (125/795 nt)	PP_1723	2‑aminoethylphosphonate ABC transporter permease
	?	NC_002947	1923984 =	99 (1.110)					coding (98/795 nt)	PP_1723	2‑aminoethylphosphonate ABC transporter permease
*	?	NC_002947	1947818 =	32 (0.340)	4 (0.050)	4/198	NT	12.6%	intergenic (‑36/+134)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
	?	NC_002947	1947937 =	30 (0.410)					intergenic (‑155/+15)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
*	?	NC_002947	= 1947843	31 (0.330)	6 (0.080)	6/198	NT	18.0%	intergenic (‑61/+109)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
	?	NC_002947	= 1947910	30 (0.410)					intergenic (‑128/+42)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
*	?	NC_002947	1967188 =	16 (0.170)	18 (0.260)	13/184	NT	58.3%	intergenic (+15/+104)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	1967284 =	14 (0.200)					intergenic (+111/+8)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	= 1967220	12 (0.130)	17 (0.250)	13/184	NT	59.8%	intergenic (+47/+72)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	= 1967250	14 (0.200)					intergenic (+77/+42)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	1968088 =	92 (0.990)	6 (0.070)	6/224	NT	6.3%	intergenic (‑56/+102)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase
	?	NC_002947	1968145 =	96 (1.150)					intergenic (‑113/+45)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase
*	?	NC_002947	= 1968100	96 (1.030)	8 (0.100)	5/224	NT	8.1%	intergenic (‑68/+90)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase
	?	NC_002947	= 1968131	96 (1.150)					intergenic (‑99/+59)	yciK/gph	putative oxidoreductase/phosphoglycolate phosphatase
*	?	NC_002947	1996399 =	110 (1.180)	8 (0.090)	7/240	NT	7.5%	coding (232/549 nt)	rfbC	dTDP‑4‑dehydrorhamnose 3,5‑epimerase
	?	NC_002947	1996436 =	91 (1.020)					coding (195/549 nt)	rfbC	dTDP‑4‑dehydrorhamnose 3,5‑epimerase
*	?	NC_002947	2028004 =	75 (0.800)	4 (0.050)	4/238	NT	5.4%	coding (751/1005 nt)	wbpL	glycosyl transferase WbpL
	?	NC_002947	2028039 =	68 (0.770)					coding (786/1005 nt)	wbpL	glycosyl transferase WbpL
*	?	NC_002947	2032853 =	NA (NA)	6 (0.070)	6/238	NT	32.7%	coding (291/1665 nt)	pgi‑I	glucose 6‑phosphate isomerase
	?	NC_002947	2032878 =	13 (0.140)					coding (316/1665 nt)	pgi‑I	glucose 6‑phosphate isomerase
*	?	NC_002947	2048837 =	68 (0.730)	6 (0.070)	5/216	NT	9.8%	intergenic (+33/+106)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	2048928 =	52 (0.640)					intergenic (+124/+15)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
*	?	NC_002947	= 2050638	32 (0.340)	17 (0.260)	9/176	NT	36.4%	intergenic (‑88/+87)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
	?	NC_002947	= 2050674	37 (0.560)					intergenic (‑124/+51)	PP_1824/PP_1825	Smr domain‑containing protein/hypothetical protein
*	?	NC_002947	= 2052897	93 (1.000)	6 (0.070)	6/232	NT	6.7%	coding (747/783 nt)	PP_1828	hypothetical protein
	?	NC_002947	= 2052913	82 (0.950)					coding (731/783 nt)	PP_1828	hypothetical protein
*	?	NC_002947	= 2054743	124 (1.330)	6 (0.070)	6/238	NT	5.5%	intergenic (‑75/‑160)	PP_1829/aroC	alpha/beta family hydrolase/chorismate synthase
	?	NC_002947	= 2054829	90 (1.010)					intergenic (‑161/‑74)	PP_1829/aroC	alpha/beta family hydrolase/chorismate synthase
*	?	NC_002947	= 2056021	82 (0.880)	4 (0.050)	4/218	NT	6.0%	intergenic (+27/‑116)	aroC/PP_1831	chorismate synthase/membrane protein
	?	NC_002947	= 2056095	54 (0.660)					intergenic (+101/‑42)	aroC/PP_1831	chorismate synthase/membrane protein
*	?	NC_002947	= 2057866	69 (0.740)	14 (0.190)	6/202	NT	18.3%	intergenic (+39/+89)	PP_1832/PP_1833	oxidase/hypothetical protein
	?	NC_002947	= 2057906	69 (0.920)					intergenic (+79/+49)	PP_1832/PP_1833	oxidase/hypothetical protein
*	?	NC_002947	= 2063227	41 (0.440)	15 (0.200)	10/200	NT	28.4%	intergenic (+41/‑166)	PP_1838/PP_1839	membrane protein/hypothetical protein
	?	NC_002947	= 2063271	43 (0.580)					intergenic (+85/‑122)	PP_1838/PP_1839	membrane protein/hypothetical protein
*	?	NC_002947	= 2070381	NA (NA)	16 (0.180)	4/240	NT	NA	coding (712/1422 nt)	PP_1846	group II intron‑encoding maturase
	?	NC_002947	= 2070412	NA (NA)					coding (743/1422 nt)	PP_1846	group II intron‑encoding maturase
*	?	NC_002947	= 2086293	NA (NA)	4 (0.050)	4/234	NT	NA	coding (365/1302 nt)	PP_1865	transposase
	?	NC_002947	= 2086339	NA (NA)					coding (411/1302 nt)	PP_1865	transposase
*	?	NC_002947	2086488 =	NA (NA)	4 (0.050)	4/238	NT	NA	coding (560/1302 nt)	PP_1865	transposase
	?	NC_002947	2086514 =	NA (NA)					coding (586/1302 nt)	PP_1865	transposase
*	?	NC_002947	2100003 =	35 (0.380)	13 (0.170)	10/204	NT	29.7%	intergenic (‑71/‑134)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	2100098 =	33 (0.430)					intergenic (‑166/‑39)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	= 2100025	37 (0.400)	22 (0.290)	13/204	NT	41.0%	intergenic (‑93/‑112)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	= 2100074	33 (0.430)					intergenic (‑142/‑63)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	2128264 =	77 (0.830)	4 (0.050)	6/234	NT	5.6%	coding (3592/3873 nt)	PP_1887	hypothetical protein
	?	NC_002947	2128288 =	62 (0.710)					coding (3616/3873 nt)	PP_1887	hypothetical protein
*	?	NC_002947	2202510 =	75 (0.800)	4 (0.050)	4/236	NT	5.2%	coding (144/990 nt)	PP_1947	hypothetical protein
	?	NC_002947	2202554 =	74 (0.840)					coding (188/990 nt)	PP_1947	hypothetical protein
*	?	NC_002947	2268452 =	97 (1.040)	5 (0.060)	5/240	NT	5.1%	coding (734/1506 nt)	purF	amidophosphoribosyl transferase
	?	NC_002947	2268496 =	94 (1.050)					coding (778/1506 nt)	purF	amidophosphoribosyl transferase
*	?	NC_002947	2270310 =	75 (0.800)	7 (0.080)	7/236	NT	8.6%	coding (1070/1212 nt)	metZ	O‑succinylhomoserine sulfhydrylase
	?	NC_002947	2270342 =	78 (0.890)					coding (1102/1212 nt)	metZ	O‑succinylhomoserine sulfhydrylase
*	?	NC_002947	2276019 =	63 (0.680)	8 (0.090)	7/234	NT	11.2%	coding (1346/1644 nt)	PP_2006	membrane protein
	?	NC_002947	2276062 =	68 (0.780)					coding (1303/1644 nt)	PP_2006	membrane protein
*	?	NC_002947	2281779 =	89 (0.950)	6 (0.070)	5/240	NT	6.7%	coding (558/894 nt)	PP_2009	1‑aminocyclopropane‑1‑carboxylate deaminase
	?	NC_002947	2281796 =	81 (0.900)					coding (575/894 nt)	PP_2009	1‑aminocyclopropane‑1‑carboxylate deaminase
*	?	NC_002947	2295812 =	52 (0.560)	11 (0.120)	7/240	NT	14.5%	intergenic (+15/+118)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	2295909 =	80 (0.890)					intergenic (+112/+21)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	= 2295841	71 (0.760)	6 (0.080)	5/202	NT	9.1%	intergenic (+44/+89)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	= 2295878	63 (0.840)					intergenic (+81/+52)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	= 2298415	103 (1.100)	5 (0.060)	5/232	NT	5.1%	coding (1750/3645 nt)	sbcC	exonuclease subunit SbcC
	?	NC_002947	= 2298442	91 (1.050)					coding (1723/3645 nt)	sbcC	exonuclease subunit SbcC
*	?	NC_002947	= 2301552	40 (0.430)	8 (0.100)	4/222	NT	16.6%	intergenic (‑153/‑178)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	= 2301609	45 (0.540)					intergenic (‑210/‑121)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
*	?	NC_002947	2310567 =	102 (1.090)	5 (0.060)	5/230	NT	5.5%	coding (275/1311 nt)	PP_2033	hypothetical protein
	?	NC_002947	2310624 =	77 (0.900)					coding (332/1311 nt)	PP_2033	hypothetical protein
*	?	NC_002947	2340736 =	89 (0.950)	13 (0.140)	11/248	NT	14.2%	intergenic (+27/‑88)	dctA‑II/yraO	C4‑dicarboxylate transport protein/transporter YraO
	?	NC_002947	2340767 =	69 (0.750)					intergenic (+58/‑57)	dctA‑II/yraO	C4‑dicarboxylate transport protein/transporter YraO
*	?	NC_002947	2360152 =	93 (1.000)	12 (0.130)	9/240	NT	11.6%	coding (1048/1134 nt)	PP_2075	membrane protein
	?	NC_002947	= 3840201	93 (1.040)					coding (1081/1158 nt)	PP_3389	membrane protein
*	?	NC_002947	2379610 =	71 (0.760)	5 (0.050)	4/244	NT	6.5%	intergenic (+22/‑68)	cmpX/PP_2088	protein CmpX/RNA polymerase sigma factor SigX
	?	NC_002947	2379652 =	74 (0.810)					intergenic (+64/‑26)	cmpX/PP_2088	protein CmpX/RNA polymerase sigma factor SigX
*	?	NC_002947	2408436 =	94 (1.010)	6 (0.070)	6/234	NT	6.6%	coding (172/1566 nt)	PP_2111	aerotaxis receptor
	?	NC_002947	2408461 =	83 (0.950)					coding (147/1566 nt)	PP_2111	aerotaxis receptor
*	?	NC_002947	2454039 =	72 (0.770)	4 (0.050)	4/238	NT	6.0%	coding (1123/3450 nt)	mfd	transcription‑repair coupling factor
	?	NC_002947	2454084 =	57 (0.640)					coding (1078/3450 nt)	mfd	transcription‑repair coupling factor
*	?	NC_002947	2461393 =	87 (0.930)	7 (0.080)	7/238	NT	8.2%	coding (349/1251 nt)	lolC	lipoprotein releasing system transmembrane protein LolC
	?	NC_002947	2461425 =	73 (0.820)					coding (381/1251 nt)	lolC	lipoprotein releasing system transmembrane protein LolC
*	?	NC_002947	2464301 =	87 (0.930)	5 (0.060)	6/232	NT	6.5%	intergenic (+13/+27)	lolE/PP_2157	lipoprotein releasing system permease/sensor histidine kinase
	?	NC_002947	2464329 =	63 (0.730)					coding (1352/1353 nt)	PP_2157	sensor histidine kinase
*	?	NC_002947	= 2472183	34 (0.360)	13 (0.200)	10/172	NT	29.1%	intergenic (+44/+105)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
	?	NC_002947	= 2472229	40 (0.620)					intergenic (+90/+59)	PP_2166/PP_2167	anti‑anti‑sigma factor/PhoD‑like phosphatase
*	?	NC_002947	2500514 =	103 (1.100)	8 (0.090)	6/240	NT	7.4%	coding (2372/2454 nt)	PP_2193	ferric siderophore receptor
	?	NC_002947	2500534 =	101 (1.130)					coding (2392/2454 nt)	PP_2193	ferric siderophore receptor
*	?	NC_002947	2516982 =	96 (1.030)	6 (0.070)	6/236	NT	6.3%	coding (300/864 nt)	PP_2210	LysR family transcriptional regulator
	?	NC_002947	2517002 =	88 (1.000)					coding (320/864 nt)	PP_2210	LysR family transcriptional regulator
*	?	NC_002947	= 2522067	80 (0.860)	5 (0.060)	5/236	NT	6.2%	coding (3275/4446 nt)	PP_2212	leucine‑rich repeat‑containing protein
	?	NC_002947	= 2522078	76 (0.860)					coding (3286/4446 nt)	PP_2212	leucine‑rich repeat‑containing protein
*	?	NC_002947	2530824 =	31 (0.330)	8 (0.090)	6/246	NT	20.8%	coding (20/369 nt)	PP_2219	hypothetical protein
	?	NC_002947	= 4908127	NA (NA)					intergenic (‑58/‑224)	PP_4317/PP_4318	hypothetical protein/transposase
*	?	NC_002947	= 2577167	85 (0.910)	6 (0.070)	4/228	NT	7.1%	coding (1271/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 2577215	80 (0.940)					coding (1223/1776 nt)	PP_2259	sigma‑54 dependent transcriptional regulator
*	?	NC_002947	2581643 =	62 (0.660)	11 (0.120)	9/244	NT	15.2%	coding (822/867 nt)	PP_2262	sugar ABC transporter permease
	?	NC_002947	2581670 =	62 (0.680)					coding (849/867 nt)	PP_2262	sugar ABC transporter permease
*	?	NC_002947	2605946 =	99 (1.060)	6 (0.070)	5/234	NT	6.6%	coding (413/2346 nt)	PP_2284	tail tubular protein B
	?	NC_002947	2605976 =	78 (0.890)					coding (443/2346 nt)	PP_2284	tail tubular protein B
*	?	NC_002947	2614065 =	83 (0.890)	4 (0.040)	4/240	NT	5.1%	coding (2961/4710 nt)	PP_2287	internal core protein
	?	NC_002947	2614092 =	69 (0.770)					coding (2988/4710 nt)	PP_2287	internal core protein
*	?	NC_002947	= 2618388	79 (0.850)	6 (0.070)	6/240	NT	7.3%	coding (99/288 nt)	PP_2291	hypothetical protein
	?	NC_002947	= 2618402	76 (0.850)					coding (113/288 nt)	PP_2291	hypothetical protein
*	?	NC_002947	2619461 =	75 (0.800)	6 (0.070)	6/238	NT	8.4%	intergenic (‑106/‑43)	PP_2292/PP_2293	hypothetical protein/DNA maturase B
	?	NC_002947	2619490 =	60 (0.680)					intergenic (‑135/‑14)	PP_2292/PP_2293	hypothetical protein/DNA maturase B
*	?	NC_002947	2626249 =	72 (0.770)	5 (0.060)	5/232	NT	7.3%	intergenic (+9/‑141)	PP_t40/PP_2298	tRNA‑His/hypothetical protein
	?	NC_002947	2626282 =	61 (0.700)					intergenic (+42/‑108)	PP_t40/PP_2298	tRNA‑His/hypothetical protein
*	?	NC_002947	2664051 =	42 (0.450)	8 (0.110)	5/202	NT	21.9%	intergenic (+33/‑130)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase
	?	NC_002947	2664132 =	23 (0.310)					intergenic (+114/‑49)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase
*	?	NC_002947	2668066 =	61 (0.650)	4 (0.060)	5/190	NT	12.8%	intergenic (+41/‑126)	prpF/prpD	aconitate isomerase/2‑methylcitrate dehydratase
	?	NC_002947	2668155 =	8 (0.110)					intergenic (+130/‑37)	prpF/prpD	aconitate isomerase/2‑methylcitrate dehydratase
*	?	NC_002947	= 2683396	87 (0.930)	5 (0.060)	3/216	NT	5.8%	intergenic (+29/+84)	prpE/PP_2352	propionyl‑CoA synthetase/hypothetical protein
	?	NC_002947	= 2683447	87 (1.080)					intergenic (+80/+33)	prpE/PP_2352	propionyl‑CoA synthetase/hypothetical protein
*	?	NC_002947	2692342 =	90 (0.960)	5 (0.060)	5/242	NT	5.5%	coding (460/534 nt)	PP_2359	putative Type 1 pili subunit CsuA/B protein
	?	NC_002947	2692371 =	86 (0.950)					coding (489/534 nt)	PP_2359	putative Type 1 pili subunit CsuA/B protein
*	?	NC_002947	= 2715089	71 (0.760)	6 (0.070)	6/244	NT	8.2%	coding (58/3708 nt)	metH	cobalamin‑dependent methionine synthase
	?	NC_002947	= 2715110	65 (0.710)					coding (37/3708 nt)	metH	cobalamin‑dependent methionine synthase
*	?	NC_002947	= 2730792	84 (0.900)	4 (0.050)	4/234	NT	5.2%	coding (86/2361 nt)	polB	DNA polymerase II
	?	NC_002947	= 2730829	67 (0.770)					coding (123/2361 nt)	polB	DNA polymerase II
*	?	NC_002947	= 2743632	91 (0.980)	6 (0.070)	6/234	NT	6.8%	intergenic (+28/‑47)	PP_2397/PP_2398	EF hand domain‑containing protein/hypothetical protein
	?	NC_002947	= 2743653	79 (0.900)					intergenic (+49/‑26)	PP_2397/PP_2398	EF hand domain‑containing protein/hypothetical protein
*	?	NC_002947	2752135 =	85 (0.910)	5 (0.060)	5/242	NT	6.1%	coding (919/1278 nt)	czcC‑II	cobalt‑zinc‑cadmium resistance protein
	?	NC_002947	2752172 =	72 (0.800)					coding (956/1278 nt)	czcC‑II	cobalt‑zinc‑cadmium resistance protein
*	?	NC_002947	2752335 =	67 (0.720)	4 (0.050)	3/238	NT	6.0%	coding (1119/1278 nt)	czcC‑II	cobalt‑zinc‑cadmium resistance protein
	?	NC_002947	2752394 =	61 (0.690)					coding (1178/1278 nt)	czcC‑II	cobalt‑zinc‑cadmium resistance protein
*	?	NC_002947	2765252 =	68 (0.730)	5 (0.060)	5/238	NT	7.0%	noncoding (15/199 nt)	PP_mr33	Cobalamin regulatory region
	?	NC_002947	2765283 =	69 (0.780)					intergenic (‑17/+15)	PP_mr33/PP_2419	Cobalamin regulatory region/membrane protein
*	?	NC_002947	= 2774112	85 (0.910)	10 (0.120)	6/228	NT	11.5%	intergenic (+20/+90)	calA/PP_5521	coniferyl alcohol dehydrogenase/hypothetical protein
	?	NC_002947	= 2774173	76 (0.890)					intergenic (+81/+29)	calA/PP_5521	coniferyl alcohol dehydrogenase/hypothetical protein
*	?	NC_002947	= 2837426	60 (0.640)	4 (0.050)	4/236	NT	6.3%	coding (949/1101 nt)	PP_2489	xenobiotic reductase
	?	NC_002947	= 2837444	62 (0.700)					coding (931/1101 nt)	PP_2489	xenobiotic reductase
*	?	NC_002947	2950146 =	78 (0.840)	4 (0.050)	4/236	NT	5.4%	coding (1119/1374 nt)	oguA	8‑oxoguanine deaminase
	?	NC_002947	2950187 =	67 (0.760)					coding (1078/1374 nt)	oguA	8‑oxoguanine deaminase
*	?	NC_002947	= 2954675	43 (0.460)	12 (0.140)	8/228	NT	23.7%	intergenic (‑135/‑146)	PP_2586/PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
	?	NC_002947	= 2954738	38 (0.450)					intergenic (‑198/‑83)	PP_2586/PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
*	?	NC_002947	= 2957129	88 (0.940)	4 (0.050)	4/220	NT	5.1%	intergenic (+41/‑155)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
	?	NC_002947	= 2957186	71 (0.860)					intergenic (+98/‑98)	PP_2588/PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
*	?	NC_002947	= 3011008	107 (1.150)	8 (0.090)	8/232	NT	7.6%	coding (26/1614 nt)	bcsG	endoglucanase
	?	NC_002947	= 3011032	94 (1.090)					coding (50/1614 nt)	bcsG	endoglucanase
*	?	NC_002947	3029319 =	88 (0.940)	6 (0.070)	5/246	NT	6.6%	coding (929/1653 nt)	pcaY	aromatic acid chemoreceptor
	?	NC_002947	3029358 =	84 (0.910)					coding (968/1653 nt)	pcaY	aromatic acid chemoreceptor
*	?	NC_002947	3036028 =	89 (0.950)	6 (0.070)	5/242	NT	6.9%	coding (426/930 nt)	PP_2648	universal stress protein family protein
	?	NC_002947	3036056 =	77 (0.850)					coding (398/930 nt)	PP_2648	universal stress protein family protein
*	?	NC_002947	= 3055224	72 (0.770)	4 (0.040)	4/240	NT	5.3%	coding (444/792 nt)	PP_2667	ABC transporter permease
	?	NC_002947	= 3055289	75 (0.840)					coding (379/792 nt)	PP_2667	ABC transporter permease
*	?	NC_002947	3081158 =	75 (0.800)	17 (0.190)	13/234	NT	19.3%	coding (1400/1719 nt)	PP_2691	hypothetical protein
	?	NC_002947	3081186 =	72 (0.820)					coding (1372/1719 nt)	PP_2691	hypothetical protein
*	?	NC_002947	3081668 =	76 (0.810)	4 (0.040)	4/244	NT	5.2%	coding (890/1719 nt)	PP_2691	hypothetical protein
	?	NC_002947	3081711 =	73 (0.800)					coding (847/1719 nt)	PP_2691	hypothetical protein
*	?	NC_002947	= 3135354	73 (0.780)	8 (0.090)	7/232	NT	10.4%	intergenic (+23/‑37)	PP_2751/PP_2752	hypothetical protein/hypothetical protein
	?	NC_002947	= 3135365	70 (0.810)					intergenic (+34/‑26)	PP_2751/PP_2752	hypothetical protein/hypothetical protein
*	?	NC_002947	= 3219398	70 (0.750)	8 (0.090)	7/232	NT	10.7%	intergenic (‑98/+80)	nfxB/PP_2821	HTH‑type transcriptional regulator NfxB/hypothetical protein
	?	NC_002947	= 3219419	69 (0.800)					intergenic (‑119/+59)	nfxB/PP_2821	HTH‑type transcriptional regulator NfxB/hypothetical protein
*	?	NC_002947	= 3270478	69 (0.740)	4 (0.040)	4/240	NT	5.7%	coding (1650/1953 nt)	PP_2869	FMN‑binding oxidoreductase
	?	NC_002947	= 3270486	66 (0.740)					coding (1642/1953 nt)	PP_2869	FMN‑binding oxidoreductase
*	?	NC_002947	= 3292346	100 (1.070)	5 (0.060)	5/236	NT	5.4%	coding (1587/3675 nt)	PP_2893	hypothetical protein
	?	NC_002947	= 3292388	81 (0.920)					coding (1629/3675 nt)	PP_2893	hypothetical protein
*	?	NC_002947	3296420 =	74 (0.790)	4 (0.050)	4/230	NT	5.3%	intergenic (‑246/+6)	PP_2896/PP_2898	hypothetical protein/hypothetical protein
	?	NC_002947	3296484 =	74 (0.860)					coding (434/492 nt)	PP_2898	hypothetical protein
*	?	NC_002947	3303921 =	90 (0.960)	7 (0.080)	6/236	NT	7.9%	coding (514/1383 nt)	cysS	cysteine‑‑tRNA ligase
	?	NC_002947	3303954 =	78 (0.890)					coding (547/1383 nt)	cysS	cysteine‑‑tRNA ligase
*	?	NC_002947	= 3310221	65 (0.700)	7 (0.080)	7/242	NT	9.6%	intergenic (+42/‑109)	lhgO/gabP‑III	L‑2‑hydroxyglutarate oxidase/gamma‑aminobutyrate permease
	?	NC_002947	= 3310250	69 (0.760)					intergenic (+71/‑80)	lhgO/gabP‑III	L‑2‑hydroxyglutarate oxidase/gamma‑aminobutyrate permease
*	?	NC_002947	3316655 =	77 (0.830)	4 (0.050)	4/238	NT	5.1%	coding (186/630 nt)	ribC	riboflavin synthase
	?	NC_002947	3316712 =	76 (0.860)					coding (129/630 nt)	ribC	riboflavin synthase
*	?	NC_002947	3319164 =	75 (0.800)	9 (0.110)	8/228	NT	10.8%	intergenic (‑85/+107)	treSA/PP_2919	trehalose synthase A/LysR family transcriptional regulator
	?	NC_002947	3319249 =	80 (0.940)					intergenic (‑170/+22)	treSA/PP_2919	trehalose synthase A/LysR family transcriptional regulator
*	?	NC_002947	3339160 =	82 (0.880)	6 (0.080)	5/206	NT	9.6%	intergenic (‑119/+124)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase
	?	NC_002947	3339248 =	46 (0.600)					intergenic (‑207/+36)	PP_2935/ybiT	membrane protein/ABC‑F family ATPase
*	?	NC_002947	= 3378443	81 (0.870)	5 (0.050)	5/244	NT	6.2%	coding (331/429 nt)	PP_2979	hypothetical protein
	?	NC_002947	= 3378480	72 (0.790)					coding (294/429 nt)	PP_2979	hypothetical protein
*	?	NC_002947	3380890 =	105 (1.130)	6 (0.070)	6/232	NT	6.0%	coding (519/999 nt)	tnpT‑I	cointegrate resolution protein T
	?	NC_002947	3380917 =	90 (1.040)					coding (546/999 nt)	tnpT‑I	cointegrate resolution protein T
*	?	NC_002947	= 3383608	62 (0.660)	10 (0.110)	9/250	NT	8.9%	coding (501/546 nt)	PP_2985	hypothetical protein
	?	NC_002947	= 6172325	143 (1.530)					coding (33/1836 nt)	glmS	L‑glutamine/D‑fructose‑6‑phosphate aminotransferase
*	?	NC_002947	3400499 =	100 (1.070)	5 (0.060)	4/242	NT	5.4%	coding (114/549 nt)	PP_3006	ECF family RNA polymerase sigma‑70 factor
	?	NC_002947	3400544 =	80 (0.890)					coding (69/549 nt)	PP_3006	ECF family RNA polymerase sigma‑70 factor
*	?	NC_002947	3403942 =	71 (0.760)	5 (0.060)	3/238	NT	7.2%	coding (317/360 nt)	PP_3014	hypothetical protein
	?	NC_002947	3403962 =	62 (0.700)					coding (337/360 nt)	PP_3014	hypothetical protein
*	?	NC_002947	= 3438482	63 (0.680)	4 (0.040)	4/240	NT	6.2%	coding (680/741 nt)	PP_3057	pectinesterase
	?	NC_002947	= 3438502	61 (0.680)					coding (700/741 nt)	PP_3057	pectinesterase
*	?	NC_002947	3468076 =	87 (0.930)	6 (0.070)	4/244	NT	6.8%	coding (671/1365 nt)	PP_3082	membrane protein
	?	NC_002947	3468100 =	79 (0.870)					coding (647/1365 nt)	PP_3082	membrane protein
*	?	NC_002947	= 3472643	77 (0.830)	5 (0.060)	5/236	NT	5.5%	intergenic (‑69/+39)	PP_3084/PP_3085	ferric siderophore receptor/transmembrane sensor
	?	NC_002947	= 3472685	98 (1.110)					coding (963/966 nt)	PP_3085	transmembrane sensor
*	?	NC_002947	3487390 =	98 (1.050)	5 (0.060)	5/238	NT	5.7%	coding (664/1344 nt)	PP_3093	hypothetical protein
	?	NC_002947	3487454 =	73 (0.820)					coding (600/1344 nt)	PP_3093	hypothetical protein
*	?	NC_002947	3491981 =	71 (0.760)	5 (0.060)	5/238	NT	6.9%	coding (481/1071 nt)	PP_3096	hypothetical protein
	?	NC_002947	3492019 =	67 (0.750)					coding (443/1071 nt)	PP_3096	hypothetical protein
*	?	NC_002947	3498114 =	94 (1.010)	5 (0.060)	5/238	NT	5.2%	intergenic (‑475/+231)	PP_5562/PP_5563	hypothetical protein/membrane protein
	?	NC_002947	3498131 =	91 (1.020)					intergenic (‑492/+214)	PP_5562/PP_5563	hypothetical protein/membrane protein
*	?	NC_002947	3513211 =	73 (0.780)	4 (0.050)	4/238	NT	5.5%	coding (1836/4158 nt)	PP_3108	rhs family protein
	?	NC_002947	3513240 =	68 (0.770)					coding (1865/4158 nt)	PP_3108	rhs family protein
*	?	NC_002947	3585378 =	76 (0.810)	4 (0.050)	3/232	NT	5.7%	coding (348/762 nt)	benD	1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
	?	NC_002947	3585417 =	61 (0.700)					coding (387/762 nt)	benD	1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase
*	?	NC_002947	= 3588138	60 (0.640)	6 (0.070)	5/240	NT	11.6%	intergenic (+16/‑59)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
	?	NC_002947	= 3588208	34 (0.380)					coding (12/1272 nt)	benE‑II	benzoate transport protein
*	?	NC_002947	3588140 =	60 (0.640)	9 (0.110)	8/210	NT	17.6%	intergenic (+18/‑57)	catA‑II/benE‑II	catechol 1,2‑dioxygenase/benzoate transport protein
	?	NC_002947	3588208 =	34 (0.430)					coding (12/1272 nt)	benE‑II	benzoate transport protein
*	?	NC_002947	= 3622266	86 (0.920)	11 (0.130)	11/226	NT	12.1%	intergenic (‑186/+40)	PP_3192/PP_3193	hypothetical protein/hypothetical protein
	?	NC_002947	= 3622288	82 (0.970)					intergenic (‑208/+18)	PP_3192/PP_3193	hypothetical protein/hypothetical protein
*	?	NC_002947	3640830 =	86 (0.920)	6 (0.070)	6/230	NT	7.6%	intergenic (+34/+46)	PP_3207/PP_3208	cyclase/Pdr/VanB family oxidoreductase
	?	NC_002947	3640868 =	67 (0.780)					intergenic (+72/+8)	PP_3207/PP_3208	cyclase/Pdr/VanB family oxidoreductase
*	?	NC_002947	= 3650560	86 (0.920)	5 (0.060)	4/238	NT	5.5%	coding (306/609 nt)	PP_3216	cysteine dioxygenase
	?	NC_002947	= 3650570	89 (1.000)					coding (296/609 nt)	PP_3216	cysteine dioxygenase
*	?	NC_002947	3652905 =	77 (0.830)	6 (0.070)	5/238	NT	7.4%	coding (748/1320 nt)	PP_3218	NtaA/SnaA/SoxA family monooxygenase
	?	NC_002947	3652942 =	76 (0.860)					coding (785/1320 nt)	PP_3218	NtaA/SnaA/SoxA family monooxygenase
*	?	NC_002947	= 3659491	87 (0.930)	7 (0.080)	4/244	NT	7.8%	coding (418/1620 nt)	PP_3223	ABC transporter substrate‑binding protein
	?	NC_002947	= 3659530	81 (0.890)					coding (379/1620 nt)	PP_3223	ABC transporter substrate‑binding protein
*	?	NC_002947	3712440 =	83 (0.890)	8 (0.090)	6/238	NT	9.6%	coding (599/990 nt)	paaA	ring 1,2‑phenylacetyl‑CoA epoxidase subunit alpha
	?	NC_002947	3712481 =	72 (0.810)					coding (558/990 nt)	paaA	ring 1,2‑phenylacetyl‑CoA epoxidase subunit alpha
*	?	NC_002947	3723717 =	78 (0.840)	9 (0.100)	9/232	NT	11.4%	intergenic (+4/+26)	PP_3288/PP_3289	universal stress protein family protein/acetyltransferase
	?	NC_002947	3723739 =	68 (0.790)					intergenic (+26/+4)	PP_3288/PP_3289	universal stress protein family protein/acetyltransferase
*	?	NC_002947	3820929 =	76 (0.810)	5 (0.060)	5/240	NT	6.3%	intergenic (+11/+32)	endA/ptxD	endonuclease I/phosphonate dehydrogenase
	?	NC_002947	3820967 =	76 (0.850)					coding (957/963 nt)	ptxD	phosphonate dehydrogenase
*	?	NC_002947	= 3824842	84 (0.900)	5 (0.050)	5/244	NT	6.2%	coding (163/780 nt)	kguE	epimerase
	?	NC_002947	= 3824866	69 (0.760)					coding (139/780 nt)	kguE	epimerase
*	?	NC_002947	3826400 =	NA (NA)	8 (0.090)	13/238	NT	NA	intergenic (‑312/+291)	ptxS/PP_3381	2‑ketogluconate utilization repressor/transposase
	?	NC_002947	3826414 =	NA (NA)					intergenic (‑326/+277)	ptxS/PP_3381	2‑ketogluconate utilization repressor/transposase
*	?	NC_002947	3854830 =	70 (0.750)	4 (0.050)	4/238	NT	5.8%	coding (417/888 nt)	PP_3403	quercetin 2,3‑dioxygenase
	?	NC_002947	3854861 =	63 (0.710)					coding (386/888 nt)	PP_3403	quercetin 2,3‑dioxygenase
*	?	NC_002947	= 3895858	85 (0.910)	10 (0.110)	6/242	NT	10.4%	coding (465/582 nt)	PP_3438	membrane protein
	?	NC_002947	= 3895871	90 (1.000)					coding (478/582 nt)	PP_3438	membrane protein
*	?	NC_002947	= 3914719	97 (1.040)	6 (0.070)	5/238	NT	5.9%	coding (112/702 nt)	PP_3454	transcriptional regulator
	?	NC_002947	= 3914743	99 (1.110)					coding (88/702 nt)	PP_3454	transcriptional regulator
*	?	NC_002947	= 3919334	76 (0.810)	7 (0.080)	7/232	NT	8.8%	coding (3072/3129 nt)	mexB	multidrug resistance protein MexB
	?	NC_002947	= 3919346	75 (0.870)					coding (3084/3129 nt)	mexB	multidrug resistance protein MexB
*	?	NC_002947	= 3944242	104 (1.110)	6 (0.070)	5/234	NT	5.7%	coding (198/507 nt)	PP_5605	hypothetical protein
	?	NC_002947	= 3944252	103 (1.180)					coding (188/507 nt)	PP_5605	hypothetical protein
*	?	NC_002947	3947957 =	18 (0.190)	7 (0.100)	6/194	NT	26.9%	coding (136/1797 nt)	PP_3483	type II secretion system protein
	?	NC_002947	3948042 =	24 (0.330)					coding (51/1797 nt)	PP_3483	type II secretion system protein
*	?	NC_002947	= 3947984	13 (0.140)	4 (0.060)	4/194	NT	19.0%	coding (109/1797 nt)	PP_3483	type II secretion system protein
	?	NC_002947	= 3948013	24 (0.330)					coding (80/1797 nt)	PP_3483	type II secretion system protein
*	?	NC_002947	= 3951141	23 (0.250)	4 (0.060)	4/194	NT	14.6%	intergenic (‑61/+134)	PP_3486/PP_3487	cytochrome c/hypothetical protein
	?	NC_002947	= 3951201	29 (0.400)					intergenic (‑121/+74)	PP_3486/PP_3487	cytochrome c/hypothetical protein
*	?	NC_002947	3963022 =	88 (0.940)	4 (0.050)	4/228	NT	5.1%	intergenic (+24/+93)	PP_3492/PP_3493	acyl‑CoA dehydrogenase/LysR family transcriptional regulator
	?	NC_002947	3963084 =	68 (0.800)					intergenic (+86/+31)	PP_3492/PP_3493	acyl‑CoA dehydrogenase/LysR family transcriptional regulator
*	?	NC_002947	3963855 =	68 (0.730)	5 (0.060)	5/240	NT	6.6%	coding (193/933 nt)	PP_3493	LysR family transcriptional regulator
	?	NC_002947	3963900 =	76 (0.850)					coding (148/933 nt)	PP_3493	LysR family transcriptional regulator
*	?	NC_002947	4018688 =	78 (0.840)	7 (0.080)	5/242	NT	8.7%	coding (1079/1662 nt)	PP_3545	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4018719 =	71 (0.790)					coding (1110/1662 nt)	PP_3545	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	= 4039105	70 (0.750)	5 (0.050)	4/244	NT	6.7%	intergenic (+11/‑83)	PP_3559/PP_3560	glycine betaine ABC transporter permease/LysR family transcriptional regulator
	?	NC_002947	= 4039142	70 (0.770)					intergenic (+48/‑46)	PP_3559/PP_3560	glycine betaine ABC transporter permease/LysR family transcriptional regulator
*	?	NC_002947	4039437 =	85 (0.910)	10 (0.110)	7/236	NT	11.8%	coding (250/864 nt)	PP_3560	LysR family transcriptional regulator
	?	NC_002947	4039462 =	69 (0.780)					coding (275/864 nt)	PP_3560	LysR family transcriptional regulator
*	?	NC_002947	= 4071847	87 (0.930)	5 (0.050)	5/244	NT	5.5%	coding (356/3099 nt)	mdtB	multidrug transporter membrane protein
	?	NC_002947	= 4071885	88 (0.970)					coding (318/3099 nt)	mdtB	multidrug transporter membrane protein
*	?	NC_002947	4091366 =	106 (1.140)	6 (0.070)	6/240	NT	5.5%	intergenic (+8/‑70)	gudP/garD	glucarate transporter/galactarate dehydratase
	?	NC_002947	4091395 =	104 (1.160)					intergenic (+37/‑41)	gudP/garD	glucarate transporter/galactarate dehydratase
*	?	NC_002947	= 4094693	97 (1.040)	9 (0.110)	9/226	NT	8.6%	intergenic (+65/+70)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator
	?	NC_002947	= 4094738	103 (1.220)					intergenic (+110/+25)	PP_3602/PP_3603	2,5‑dioxovalerate dehydrogenase/GntR family transcriptional regulator
*	?	NC_002947	= 4114361	87 (0.930)	10 (0.120)	10/224	NT	10.2%	intergenic (+64/+82)	PP_3619/ycaO	hypothetical protein/ribosomal protein S12 methylthiotransferase accessory factor
	?	NC_002947	= 4114406	99 (1.180)					intergenic (+109/+37)	PP_3619/ycaO	hypothetical protein/ribosomal protein S12 methylthiotransferase accessory factor
*	?	NC_002947	= 4131154	93 (1.000)	7 (0.080)	6/230	NT	7.2%	intergenic (+22/+90)	PP_3634/PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
	?	NC_002947	= 4131216	96 (1.120)					intergenic (+84/+28)	PP_3634/PP_3635	GNAT family acetyltransferase/sulfonate ABC transporter permease
*	?	NC_002947	= 4150085	59 (0.630)	13 (0.160)	10/214	NT	18.8%	intergenic (+40/‑357)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
	?	NC_002947	= 4150116	62 (0.780)					intergenic (+71/‑326)	PP_3654/PP_3655	leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
*	?	NC_002947	4159113 =	77 (0.830)	12 (0.140)	8/224	NT	16.3%	intergenic (+17/‑192)	PP_3661/PP_3662	membrane protein/hypothetical protein
	?	NC_002947	4159201 =	54 (0.650)					intergenic (+105/‑104)	PP_3661/PP_3662	membrane protein/hypothetical protein
*	?	NC_002947	= 4165843	102 (1.090)	5 (0.060)	5/236	NT	5.1%	coding (303/1335 nt)	PP_3666	MHS family metabolite MFS transporter
	?	NC_002947	= 4165868	89 (1.010)					coding (278/1335 nt)	PP_3666	MHS family metabolite MFS transporter
*	?	NC_002947	4189306 =	98 (1.050)	9 (0.100)	9/234	NT	9.1%	coding (525/819 nt)	PP_5611	transcriptional regulator
	?	NC_002947	4189330 =	89 (1.020)					coding (549/819 nt)	PP_5611	transcriptional regulator
*	?	NC_002947	4202409 =	83 (0.890)	4 (0.050)	4/234	NT	5.0%	coding (5411/6624 nt)	PP_3691	DNA helicase‑related protein
	?	NC_002947	4202451 =	73 (0.840)					coding (5369/6624 nt)	PP_3691	DNA helicase‑related protein
*	?	NC_002947	= 4261430	105 (1.130)	6 (0.070)	5/240	NT	5.6%	coding (1376/2460 nt)	PP_3734	ABC transporter permease
	?	NC_002947	= 4261448	102 (1.140)					coding (1358/2460 nt)	PP_3734	ABC transporter permease
*	?	NC_002947	= 4291194	68 (0.730)	9 (0.100)	7/234	NT	12.5%	coding (1437/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 4291207	62 (0.710)					coding (1424/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	= 4301353	71 (0.760)	7 (0.080)	6/238	NT	8.8%	coding (474/675 nt)	PP_3774	hypothetical protein
	?	NC_002947	= 4301361	77 (0.870)					coding (482/675 nt)	PP_3774	hypothetical protein
*	?	NC_002947	4340085 =	43 (0.460)	18 (0.260)	9/182	NT	46.6%	intergenic (+26/‑305)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
	?	NC_002947	4340169 =	10 (0.150)					intergenic (+110/‑221)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
*	?	NC_002947	4344327 =	61 (0.650)	6 (0.080)	6/212	NT	9.9%	intergenic (+14/‑142)	PP_3817/PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
	?	NC_002947	4344385 =	57 (0.720)					intergenic (+72/‑84)	PP_3817/PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
*	?	NC_002947	4350173 =	67 (0.720)	7 (0.090)	6/216	NT	12.0%	intergenic (‑181/+56)	galU/PP_3822	UTP‑glucose‑1‑phosphate uridylyltransferase/cytochrome c family protein
	?	NC_002947	4350224 =	45 (0.560)					intergenic (‑232/+5)	galU/PP_3822	UTP‑glucose‑1‑phosphate uridylyltransferase/cytochrome c family protein
*	?	NC_002947	4353152 =	80 (0.860)	4 (0.040)	4/240	NT	5.1%	coding (234/1086 nt)	yrpB	2‑nitropropane dioxygenase
	?	NC_002947	4353192 =	71 (0.790)					coding (274/1086 nt)	yrpB	2‑nitropropane dioxygenase
*	?	NC_002947	= 4353216	77 (0.830)	6 (0.070)	5/244	NT	8.0%	coding (298/1086 nt)	yrpB	2‑nitropropane dioxygenase
	?	NC_002947	= 4353252	62 (0.680)					coding (334/1086 nt)	yrpB	2‑nitropropane dioxygenase
*	?	NC_002947	= 4365329	89 (0.950)	5 (0.060)	5/236	NT	6.0%	coding (74/1098 nt)	PP_3842	hypothetical protein
	?	NC_002947	= 4365352	73 (0.830)					coding (97/1098 nt)	PP_3842	hypothetical protein
*	?	NC_002947	= 4386290	78 (0.840)	5 (0.060)	5/238	NT	6.3%	coding (163/501 nt)	PP_3862	assembly protein
	?	NC_002947	= 4386310	75 (0.840)					coding (143/501 nt)	PP_3862	assembly protein
*	?	NC_002947	4398703 =	80 (0.860)	6 (0.070)	6/236	NT	7.2%	coding (198/1314 nt)	PP_3877	hypothetical protein
	?	NC_002947	4398746 =	78 (0.890)					coding (155/1314 nt)	PP_3877	hypothetical protein
*	?	NC_002947	= 4429337	114 (1.220)	7 (0.080)	7/232	NT	6.1%	coding (331/711 nt)	PP_3923	phosphoglycerate mutase
	?	NC_002947	= 4429341	110 (1.270)					coding (335/711 nt)	PP_3923	phosphoglycerate mutase
*	?	NC_002947	4458807 =	78 (0.840)	6 (0.070)	6/240	NT	7.7%	intergenic (+55/‑213)	pcaJ/trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
	?	NC_002947	4458840 =	69 (0.770)					intergenic (+88/‑180)	pcaJ/trkH‑I	3‑oxoadipate CoA‑transferase subunit A/potassium transporter
*	?	NC_002947	= 4511103	59 (0.630)	6 (0.070)	5/234	NT	9.5%	coding (730/1326 nt)	rarA	DNA‑dependent ATPase
	?	NC_002947	= 4511114	59 (0.680)					coding (719/1326 nt)	rarA	DNA‑dependent ATPase
*	?	NC_002947	4536831 =	NA (NA)	5 (0.060)	5/240	NT	5.8%	coding (122/1533 nt)	PP_4025	transposase
	?	NC_002947	= 4627418	84 (0.900)					coding (132/1533 nt)	PP_4091	transposase
*	?	NC_002947	4537562 =	NA (NA)	13 (0.150)	8/240	NT	32.6%	coding (853/1533 nt)	PP_4025	transposase
	?	NC_002947	= 4626671	28 (0.300)					coding (879/1533 nt)	PP_4091	transposase
*	?	NC_002947	= 4547890	92 (0.990)	6 (0.070)	5/238	NT	6.3%	coding (158/1440 nt)	pydB	bifunctional D‑hydantoinase/dihydropyrimidinase
	?	NC_002947	= 4547894	90 (1.010)					coding (162/1440 nt)	pydB	bifunctional D‑hydantoinase/dihydropyrimidinase
*	?	NC_002947	= 4551237	84 (0.900)	7 (0.080)	6/236	NT	8.0%	coding (562/1275 nt)	pydA	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
	?	NC_002947	= 4551255	82 (0.930)					coding (580/1275 nt)	pydA	NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA
*	?	NC_002947	= 4573275	102 (1.090)	5 (0.070)	5/200	NT	5.2%	intergenic (+39/‑98)	PP_4054/glgX	hypothetical protein/glycogen debranching enzyme
	?	NC_002947	= 4573292	101 (1.350)					intergenic (+56/‑81)	PP_4054/glgX	hypothetical protein/glycogen debranching enzyme
*	?	NC_002947	4575566 =	83 (0.890)	5 (0.060)	5/230	NT	5.7%	intergenic (+40/‑82)	glgX/ybhP‑II	glycogen debranching enzyme/phosphohydrolase
	?	NC_002947	4575613 =	88 (1.030)					intergenic (+87/‑35)	glgX/ybhP‑II	glycogen debranching enzyme/phosphohydrolase
*	?	NC_002947	= 4577848	91 (0.980)	9 (0.100)	9/240	NT	9.2%	intergenic (+13/+96)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
	?	NC_002947	= 4577923	90 (1.000)					intergenic (+88/+21)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
*	?	NC_002947	4577861 =	98 (1.050)	19 (0.210)	14/240	NT	17.7%	intergenic (+26/+83)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
	?	NC_002947	4577913 =	83 (0.930)					intergenic (+78/+31)	PP_4057/glgB	membrane protein/1,4‑alpha‑glucan branching enzyme
*	?	NC_002947	= 4583538	70 (0.750)	6 (0.080)	6/210	NT	8.6%	intergenic (‑67/+104)	treSB/glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
	?	NC_002947	= 4583599	69 (0.880)					intergenic (‑128/+43)	treSB/glgE	bifunctional trehalose synthase B/maltokinase/alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
*	?	NC_002947	4586063 =	11 (0.120)	9 (0.140)	8/174	NT	62.8%	intergenic (+102/+115)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	4586167 =	3 (0.050)					intergenic (+206/+11)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 4586100	8 (0.090)	16 (0.250)	14/174	NT	78.9%	intergenic (+139/+78)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	= 4586128	3 (0.050)					intergenic (+167/+50)	PP_4061/PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	4587306 =	114 (1.220)	6 (0.070)	5/234	NT	5.4%	coding (555/1683 nt)	PP_4063	long‑chain fatty acid‑‑CoA ligase
	?	NC_002947	4587342 =	104 (1.190)					coding (519/1683 nt)	PP_4063	long‑chain fatty acid‑‑CoA ligase
*	?	NC_002947	= 4588043	88 (0.940)	8 (0.100)	5/222	NT	8.1%	intergenic (‑183/‑139)	PP_4063/ivd	long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase
	?	NC_002947	= 4588104	103 (1.240)					intergenic (‑244/‑78)	PP_4063/ivd	long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase
*	?	NC_002947	= 4599330	98 (1.050)	11 (0.120)	13/236	NT	10.9%	coding (525/3627 nt)	PP_4071	membrane protein
	?	NC_002947	= 4599354	87 (0.990)					coding (501/3627 nt)	PP_4071	membrane protein
*	?	NC_002947	= 4601441	84 (0.900)	6 (0.070)	4/236	NT	6.6%	coding (497/633 nt)	PP_4073	hypothetical protein
	?	NC_002947	= 4601464	90 (1.020)					coding (474/633 nt)	PP_4073	hypothetical protein
*	?	NC_002947	4647603 =	11 (0.120)	6 (0.090)	6/172	NT	45.2%	intergenic (+10/+121)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	4647711 =	7 (0.110)					intergenic (+118/+13)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	= 4647641	11 (0.120)	9 (0.140)	9/172	NT	55.3%	intergenic (+48/+83)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	= 4647671	7 (0.110)					intergenic (+78/+53)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	= 4659957	69 (0.740)	4 (0.040)	4/240	NT	5.5%	coding (269/1362 nt)	nuoF	NADH‑quinone oxidoreductase subunit F
	?	NC_002947	= 4659991	72 (0.800)					coding (303/1362 nt)	nuoF	NADH‑quinone oxidoreductase subunit F
*	?	NC_002947	= 4666548	112 (1.200)	7 (0.080)	9/232	NT	6.2%	coding (268/1854 nt)	nuoL	NADH‑quinone oxidoreductase subunit L
	?	NC_002947	= 4666557	109 (1.260)					coding (277/1854 nt)	nuoL	NADH‑quinone oxidoreductase subunit L
*	?	NC_002947	4675357 =	63 (0.680)	10 (0.130)	9/204	NT	22.4%	intergenic (+10/+94)	PP_4137/chrR	outer membrane siderophore receptor/chromate reductase
	?	NC_002947	4675415 =	18 (0.240)					intergenic (+68/+36)	PP_4137/chrR	outer membrane siderophore receptor/chromate reductase
*	?	NC_002947	= 4683232	64 (0.690)	5 (0.070)	5/206	NT	7.8%	intergenic (+45/‑176)	mltD/PP_4146	membrane‑bound lytic murein transglycosylase D/peptide ABC transporter substrate‑binding protein
	?	NC_002947	= 4683280	66 (0.860)					intergenic (+93/‑128)	mltD/PP_4146	membrane‑bound lytic murein transglycosylase D/peptide ABC transporter substrate‑binding protein
*	?	NC_002947	4700790 =	91 (0.980)	9 (0.110)	7/222	NT	9.5%	intergenic (‑57/+93)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
	?	NC_002947	4700862 =	91 (1.100)					intergenic (‑129/+21)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
*	?	NC_002947	= 4700803	87 (0.930)	11 (0.130)	7/222	NT	11.6%	intergenic (‑70/+80)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
	?	NC_002947	= 4700847	91 (1.100)					intergenic (‑114/+36)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
*	?	NC_002947	4755172 =	85 (0.910)	8 (0.090)	5/232	NT	9.3%	coding (368/1965 nt)	pvdT	pyoverdine ABC transporter ATP‑binding protein/permease
	?	NC_002947	4755215 =	78 (0.900)					coding (411/1965 nt)	pvdT	pyoverdine ABC transporter ATP‑binding protein/permease
*	?	NC_002947	= 4761629	113 (1.210)	6 (0.070)	4/236	NT	5.4%	coding (243/1287 nt)	pvdN	pyoverdine biosynthesis‑like protein
	?	NC_002947	= 4761647	103 (1.170)					coding (261/1287 nt)	pvdN	pyoverdine biosynthesis‑like protein
*	?	NC_002947	4773349 =	116 (1.240)	7 (0.080)	7/240	NT	6.1%	coding (5963/10413 nt)	pvdD	non‑ribosomal peptide synthetase
	?	NC_002947	4773394 =	105 (1.170)					coding (5918/10413 nt)	pvdD	non‑ribosomal peptide synthetase
*	?	NC_002947	4808219 =	0 (0.000)	28 (0.420)	19/180	NT	52.3%	intergenic (‑283/‑272)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 5988991	51 (0.760)					intergenic (+229/‑317)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	= 4817057	69 (0.740)	4 (0.050)	4/236	NT	5.4%	coding (638/702 nt)	PP_5669	ABC transporter ATP‑binding protein
	?	NC_002947	= 4817072	75 (0.850)					coding (653/702 nt)	PP_5669	ABC transporter ATP‑binding protein
*	?	NC_002947	= 4819028	98 (1.050)	5 (0.060)	5/238	NT	5.2%	coding (12207/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	= 4819050	90 (1.010)					coding (12185/12954 nt)	pvdL	non‑ribosomal peptide synthetase
*	?	NC_002947	4852458 =	22 (0.240)	7 (0.110)	6/168	NT	24.7%	intergenic (‑84/+213)	recR/ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
	?	NC_002947	4852599 =	28 (0.450)					intergenic (‑225/+72)	recR/ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
*	?	NC_002947	= 4852498	21 (0.230)	8 (0.130)	7/168	NT	27.5%	intergenic (‑124/+173)	recR/ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
	?	NC_002947	= 4852557	28 (0.450)					intergenic (‑183/+114)	recR/ybaB	recombination protein RecR/nucleoid‑associated broad specificity regulator
*	?	NC_002947	4856141 =	84 (0.900)	7 (0.080)	5/222	NT	7.8%	intergenic (+68/+128)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
	?	NC_002947	4856228 =	92 (1.110)					intergenic (+155/+41)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
*	?	NC_002947	4859457 =	95 (1.020)	5 (0.060)	5/240	NT	5.2%	coding (1638/2331 nt)	ligA	DNA ligase
	?	NC_002947	4859494 =	92 (1.030)					coding (1601/2331 nt)	ligA	DNA ligase
*	?	NC_002947	4861173 =	61 (0.650)	10 (0.130)	7/200	NT	16.8%	intergenic (‑79/+158)	ligA/PP_4275	DNA ligase/cell division protein ZipA
	?	NC_002947	4861264 =	50 (0.670)					intergenic (‑170/+67)	ligA/PP_4275	DNA ligase/cell division protein ZipA
*	?	NC_002947	= 4861197	65 (0.700)	20 (0.270)	16/200	NT	28.2%	intergenic (‑103/+134)	ligA/PP_4275	DNA ligase/cell division protein ZipA
	?	NC_002947	= 4861238	50 (0.670)					intergenic (‑144/+93)	ligA/PP_4275	DNA ligase/cell division protein ZipA
*	?	NC_002947	= 4864454	87 (0.930)	8 (0.090)	7/226	NT	9.1%	coding (1464/3489 nt)	smc	chromosome partition protein Smc
	?	NC_002947	= 4864479	82 (0.970)					coding (1439/3489 nt)	smc	chromosome partition protein Smc
*	?	NC_002947	4881304 =	99 (1.060)	5 (0.060)	5/234	NT	5.7%	coding (342/1356 nt)	uacT	uric acid permease
	?	NC_002947	4881350 =	74 (0.850)					coding (388/1356 nt)	uacT	uric acid permease
*	?	NC_002947	= 4884432	96 (1.030)	17 (0.200)	11/224	NT	17.3%	intergenic (+53/+76)	PP_4293/yedI	hypothetical protein/inner membrane protein
	?	NC_002947	= 4884469	76 (0.910)					intergenic (+90/+39)	PP_4293/yedI	hypothetical protein/inner membrane protein
*	?	NC_002947	4886181 =	24 (0.260)	8 (0.110)	8/192	NT	32.4%	intergenic (+15/+108)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
	?	NC_002947	4886268 =	15 (0.210)					intergenic (+102/+21)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
*	?	NC_002947	= 4886209	22 (0.240)	12 (0.170)	6/192	NT	42.9%	intergenic (+43/+80)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
	?	NC_002947	= 4886238	15 (0.210)					intergenic (+72/+51)	PP_4295/PP_4296	TetR family transcriptional regulator/hypothetical protein
*	?	NC_002947	4889614 =	71 (0.760)	10 (0.140)	8/196	NT	19.9%	intergenic (+15/‑138)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
	?	NC_002947	4889705 =	25 (0.340)					intergenic (+106/‑47)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
*	?	NC_002947	= 4890813	79 (0.850)	9 (0.100)	8/232	NT	10.6%	intergenic (+168/‑71)	glxR/ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
	?	NC_002947	= 4890835	78 (0.900)					intergenic (+190/‑49)	glxR/ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
*	?	NC_002947	= 4893624	46 (0.490)	7 (0.100)	5/196	NT	15.4%	intergenic (+54/‑154)	pyk/PP_4302	pyruvate kinase/urea transporter
	?	NC_002947	= 4893649	41 (0.560)					intergenic (+79/‑129)	pyk/PP_4302	pyruvate kinase/urea transporter
*	?	NC_002947	= 4896443	33 (0.350)	13 (0.170)	12/208	NT	27.2%	intergenic (+31/‑177)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	= 4896490	42 (0.540)					intergenic (+78/‑130)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	= 4899718	125 (1.340)	7 (0.080)	4/240	NT	5.6%	coding (72/438 nt)	PP_4308	AsnC family transcriptional regulator
	?	NC_002947	= 4899750	117 (1.310)					coding (104/438 nt)	PP_4308	AsnC family transcriptional regulator
*	?	NC_002947	4920849 =	101 (1.080)	6 (0.070)	5/238	NT	5.9%	coding (1213/2682 nt)	PP_4330	toxin‑like protein
	?	NC_002947	4920867 =	94 (1.060)					coding (1231/2682 nt)	PP_4330	toxin‑like protein
*	?	NC_002947	4957619 =	125 (1.340)	9 (0.100)	8/232	NT	7.4%	intergenic (‑57/+106)	fliH/fliG	flagellar assembly protein FliH/flagellar motor switch protein
	?	NC_002947	4957677 =	110 (1.270)					intergenic (‑115/+48)	fliH/fliG	flagellar assembly protein FliH/flagellar motor switch protein
*	?	NC_002947	5033193 =	NA (NA)	66 (0.710)	55/250	NT	37.5%	intergenic (+310/‑100)	PP_4435/PP_4437	hypothetical protein/transposase
	?	NC_002947	6144572 =	110 (1.180)					intergenic (‑52/‑42)	PP_5734/PP_5735	hypothetical protein/hypothetical protein
*	?	NC_002947	= 5036635	NA (NA)	3 (0.030)	3/232	NT	NA	coding (78/336 nt)	PP_4442	transposase
	?	NC_002947	= 5036691	NA (NA)					coding (134/336 nt)	PP_4442	transposase
*	?	NC_002947	5093453 =	121 (1.300)	12 (0.130)	11/242	NT	9.6%	coding (217/981 nt)	PP_4482	AraC family transcriptional regulator
	?	NC_002947	5093527 =	108 (1.200)					coding (143/981 nt)	PP_4482	AraC family transcriptional regulator
*	?	NC_002947	5110169 =	70 (0.750)	7 (0.080)	7/238	NT	9.1%	coding (585/1419 nt)	aroP‑II	aromatic amino acid transport protein
	?	NC_002947	5110208 =	73 (0.820)					coding (546/1419 nt)	aroP‑II	aromatic amino acid transport protein
*	?	NC_002947	5114385 =	93 (1.000)	6 (0.070)	3/238	NT	6.4%	coding (611/666 nt)	yciO	maturation protein
	?	NC_002947	5114437 =	86 (0.970)					coding (559/666 nt)	yciO	maturation protein
*	?	NC_002947	= 5115779	92 (0.990)	7 (0.080)	6/242	NT	7.6%	coding (55/861 nt)	PP_4500	TrpH family protein
	?	NC_002947	= 5115795	81 (0.900)					coding (39/861 nt)	PP_4500	TrpH family protein
*	?	NC_002947	= 5119648	127 (1.360)	10 (0.120)	7/220	NT	7.6%	intergenic (+33/+98)	PP_4505/PP_4506	sensor histidine kinase/nitroreductase family protein
	?	NC_002947	= 5119695	131 (1.600)					intergenic (+80/+51)	PP_4505/PP_4506	sensor histidine kinase/nitroreductase family protein
*	?	NC_002947	5127416 =	88 (0.940)	5 (0.050)	4/244	NT	5.5%	coding (921/2187 nt)	PP_4514	alpha/beta hydrolase superfamily esterase
	?	NC_002947	5127449 =	87 (0.960)					coding (954/2187 nt)	PP_4514	alpha/beta hydrolase superfamily esterase
*	?	NC_002947	= 5136167	90 (0.960)	9 (0.100)	6/238	NT	9.6%	coding (451/1566 nt)	PP_4521	aerotaxis receptor
	?	NC_002947	= 5136208	84 (0.950)					coding (410/1566 nt)	PP_4521	aerotaxis receptor
*	?	NC_002947	5140177 =	100 (1.070)	5 (0.060)	4/240	NT	5.0%	coding (1221/1380 nt)	PP_4524	sodium‑solute symporter
	?	NC_002947	5140211 =	93 (1.040)					coding (1255/1380 nt)	PP_4524	sodium‑solute symporter
*	?	NC_002947	5162618 =	23 (0.250)	13 (0.180)	8/198	NT	35.0%	intergenic (+93/+108)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	5162702 =	30 (0.410)					intergenic (+177/+24)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
*	?	NC_002947	= 5162643	17 (0.180)	9 (0.120)	8/198	NT	29.3%	intergenic (+118/+83)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
	?	NC_002947	= 5162675	30 (0.410)					intergenic (+150/+51)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase
*	?	NC_002947	5181182 =	86 (0.920)	6 (0.070)	7/234	NT	7.0%	coding (809/957 nt)	PP_4560	ribonuclease BN
	?	NC_002947	5181217 =	79 (0.900)					coding (774/957 nt)	PP_4560	ribonuclease BN
*	?	NC_002947	= 5190394	66 (0.710)	6 (0.070)	6/230	NT	8.2%	intergenic (‑81/+93)	PP_4570/cysK	hypothetical protein/cysteine synthase A
	?	NC_002947	= 5190411	74 (0.860)					intergenic (‑98/+76)	PP_4570/cysK	hypothetical protein/cysteine synthase A
*	?	NC_002947	= 5196440	101 (1.080)	13 (0.150)	9/230	NT	11.9%	coding (123/690 nt)	ybgJ	allophanate hydrolase subunit 1
	?	NC_002947	= 5196465	100 (1.160)					coding (98/690 nt)	ybgJ	allophanate hydrolase subunit 1
*	?	NC_002947	5201627 =	11 (0.120)	15 (0.230)	9/176	NT	59.1%	intergenic (‑65/‑115)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	5201722 =	13 (0.200)					intergenic (‑160/‑20)	PP_4582/PP_4583	membrane protein/putative Peptidase
*	?	NC_002947	= 5201663	11 (0.120)	17 (0.260)	12/176	NT	62.1%	intergenic (‑101/‑79)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	= 5201684	13 (0.200)					intergenic (‑122/‑58)	PP_4582/PP_4583	membrane protein/putative Peptidase
*	?	NC_002947	= 5202422	79 (0.850)	6 (0.070)	6/240	NT	6.7%	coding (681/2043 nt)	PP_4583	putative Peptidase
	?	NC_002947	= 5202478	91 (1.020)					coding (737/2043 nt)	PP_4583	putative Peptidase
*	?	NC_002947	= 5210282	54 (0.580)	4 (0.050)	4/218	NT	6.5%	intergenic (‑100/+78)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
	?	NC_002947	= 5210341	68 (0.840)					intergenic (‑159/+19)	rnd/PP_4592	ribonuclease D/metal dependent hydrolase
*	?	NC_002947	5240403 =	78 (0.840)	5 (0.060)	5/242	NT	6.2%	intergenic (‑41/‑84)	ldh/PP_4618	leucine dehydrogenase/hypothetical protein
	?	NC_002947	5240429 =	75 (0.830)					intergenic (‑67/‑58)	ldh/PP_4618	leucine dehydrogenase/hypothetical protein
*	?	NC_002947	= 5245672	75 (0.800)	4 (0.050)	4/236	NT	5.1%	coding (3037/3303 nt)	PP_4623	hypothetical protein
	?	NC_002947	= 5245685	78 (0.890)					coding (3024/3303 nt)	PP_4623	hypothetical protein
*	?	NC_002947	5257895 =	90 (0.960)	8 (0.090)	7/232	NT	8.3%	intergenic (‑46/+98)	PP_4634/PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
	?	NC_002947	5257986 =	94 (1.090)					intergenic (‑137/+7)	PP_4634/PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
*	?	NC_002947	5274048 =	115 (1.230)	6 (0.070)	5/224	NT	6.0%	intergenic (+22/+84)	rlmG/PP_4649	ribosomal RNA large subunit methyltransferase G/hypothetical protein
	?	NC_002947	5274121 =	84 (1.000)					intergenic (+95/+11)	rlmG/PP_4649	ribosomal RNA large subunit methyltransferase G/hypothetical protein
*	?	NC_002947	= 5277534	99 (1.060)	8 (0.090)	8/246	NT	7.5%	coding (447/1221 nt)	PP_4652	membrane protein
	?	NC_002947	= 5277572	101 (1.100)					coding (485/1221 nt)	PP_4652	membrane protein
*	?	NC_002947	5279939 =	93 (1.000)	5 (0.060)	5/242	NT	5.1%	coding (110/1086 nt)	trmA	tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA
	?	NC_002947	5279975 =	96 (1.060)					coding (146/1086 nt)	trmA	tRNA/tmRNA (uridine(54)‑C5)‑methyltransferase TrmA
*	?	NC_002947	5288442 =	28 (0.300)	6 (0.080)	5/190	NT	23.0%	intergenic (‑75/+109)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
	?	NC_002947	5288536 =	19 (0.270)					intergenic (‑169/+15)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
*	?	NC_002947	= 5288471	21 (0.230)	6 (0.080)	6/190	NT	25.6%	intergenic (‑104/+80)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
	?	NC_002947	= 5288505	19 (0.270)					intergenic (‑138/+46)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
*	?	NC_002947	5333243 =	95 (1.020)	6 (0.070)	5/220	NT	7.0%	intergenic (+27/‑216)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
	?	NC_002947	5333303 =	77 (0.940)					intergenic (+87/‑156)	gluQ/PP_5704	glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
*	?	NC_002947	5356226 =	66 (0.710)	5 (0.060)	5/234	NT	7.2%	intergenic (‑75/+42)	rbfA/infB	ribosome‑binding factor A/translation initiation factor IF‑2
	?	NC_002947	5356257 =	67 (0.770)					intergenic (‑106/+11)	rbfA/infB	ribosome‑binding factor A/translation initiation factor IF‑2
*	?	NC_002947	5455677 =	84 (0.900)	8 (0.100)	8/224	NT	9.9%	intergenic (‑37/+98)	PP_4792/PP_4793	hypothetical protein/hypothetical protein
	?	NC_002947	5455715 =	71 (0.850)					intergenic (‑75/+60)	PP_4792/PP_4793	hypothetical protein/hypothetical protein
*	?	NC_002947	5474992 =	84 (0.900)	6 (0.070)	5/232	NT	7.8%	intergenic (‑150/‑156)	proA/PP_4812	gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase
	?	NC_002947	5475062 =	64 (0.740)					intergenic (‑220/‑86)	proA/PP_4812	gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase
*	?	NC_002947	= 5501215	67 (0.720)	4 (0.050)	4/228	NT	5.5%	coding (633/855 nt)	PP_4834	SPFH domain‑containing protein
	?	NC_002947	= 5501232	77 (0.900)					coding (650/855 nt)	PP_4834	SPFH domain‑containing protein
*	?	NC_002947	= 5502769	82 (0.880)	5 (0.060)	5/240	NT	6.1%	coding (169/432 nt)	PP_4837	hypothetical protein
	?	NC_002947	= 5502788	76 (0.850)					coding (188/432 nt)	PP_4837	hypothetical protein
*	?	NC_002947	= 5506637	31 (0.330)	24 (0.330)	11/192	NT	46.7%	intergenic (+48/‑151)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
	?	NC_002947	= 5506650	31 (0.430)					intergenic (+61/‑138)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
*	?	NC_002947	= 5513315	71 (0.760)	11 (0.150)	11/198	NT	15.8%	intergenic (+45/‑109)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
	?	NC_002947	= 5513371	61 (0.830)					intergenic (+101/‑53)	urtD/urtE	ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
*	?	NC_002947	5533648 =	94 (1.010)	5 (0.050)	5/244	NT	5.2%	coding (875/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein
	?	NC_002947	5533682 =	92 (1.010)					coding (841/1137 nt)	PP_4867	BraC‑like branched‑chain amino acid ABC transporter substrate‑binding protein
*	?	NC_002947	5537079 =	49 (0.530)	10 (0.140)	7/196	NT	18.3%	intergenic (+8/+95)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
	?	NC_002947	5537155 =	51 (0.700)					intergenic (+84/+19)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
*	?	NC_002947	= 5537105	49 (0.530)	23 (0.310)	16/196	NT	34.0%	intergenic (+34/+69)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
	?	NC_002947	= 5537127	51 (0.700)					intergenic (+56/+47)	nadE/PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
*	?	NC_002947	5544518 =	77 (0.830)	9 (0.100)	6/240	NT	10.1%	coding (391/426 nt)	rpsF	30S ribosomal protein S6
	?	NC_002947	5544547 =	86 (0.960)					coding (362/426 nt)	rpsF	30S ribosomal protein S6
*	?	NC_002947	= 5546950	85 (0.910)	6 (0.070)	6/240	NT	6.5%	coding (2152/2574 nt)	rnr	exoribonuclease R
	?	NC_002947	= 5546982	91 (1.020)					coding (2120/2574 nt)	rnr	exoribonuclease R
*	?	NC_002947	= 5552384	78 (0.840)	6 (0.070)	5/236	NT	7.0%	coding (1565/1566 nt)	PP_4882	iron ABC transporter permease
	?	NC_002947	= 5552417	86 (0.980)					intergenic (+32/+629)	PP_4882/PP_5717	iron ABC transporter permease/hypothetical protein
*	?	NC_002947	5557811 =	97 (1.040)	7 (0.090)	6/204	NT	9.0%	intergenic (‑131/+200)	PP_4888/purA	methyl‑accepting chemotaxis transducer/adenylosuccinate synthetase
	?	NC_002947	5557893 =	63 (0.830)					intergenic (‑213/+118)	PP_4888/purA	methyl‑accepting chemotaxis transducer/adenylosuccinate synthetase
*	?	NC_002947	= 5571471	77 (0.830)	8 (0.100)	6/222	NT	8.9%	intergenic (+42/+99)	queG/yicG	epoxyqueuosine reductase/inner membrane protein
	?	NC_002947	= 5571528	95 (1.150)					intergenic (+99/+42)	queG/yicG	epoxyqueuosine reductase/inner membrane protein
*	?	NC_002947	5594143 =	69 (0.740)	15 (0.210)	10/194	NT	26.4%	intergenic (‑39/+106)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	5594236 =	30 (0.410)					intergenic (‑132/+13)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	= 5599566	109 (1.170)	8 (0.090)	8/238	NT	7.4%	coding (3967/5418 nt)	PP_4924	subtilase family serine protease
	?	NC_002947	= 5599598	97 (1.090)					coding (3935/5418 nt)	PP_4924	subtilase family serine protease
*	?	NC_002947	= 5655139	79 (0.850)	6 (0.070)	6/236	NT	7.2%	coding (458/1059 nt)	epd	D‑erythrose 4‑phosphate dehydrogenase
	?	NC_002947	= 5655159	79 (0.900)					coding (438/1059 nt)	epd	D‑erythrose 4‑phosphate dehydrogenase
*	?	NC_002947	= 5661091	99 (1.060)	6 (0.070)	6/230	NT	6.2%	coding (665/1701 nt)	ligB	DNA ligase B
	?	NC_002947	= 5661120	91 (1.060)					coding (694/1701 nt)	ligB	DNA ligase B
*	?	NC_002947	= 5665825	83 (0.890)	6 (0.070)	6/230	NT	7.1%	intergenic (‑70/‑213)	PP_4973/nhaP	membrane protein/NhaP‑type Na+(K+)/H+ antiporter
	?	NC_002947	= 5665884	81 (0.940)					intergenic (‑129/‑154)	PP_4973/nhaP	membrane protein/NhaP‑type Na+(K+)/H+ antiporter
*	?	NC_002947	5679860 =	103 (1.100)	6 (0.070)	6/218	NT	6.7%	intergenic (+27/‑137)	bioA/rsmE	adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA/16S rRNA (uracil(1498)‑N(3))‑methyltransferase
	?	NC_002947	5679964 =	78 (0.960)					intergenic (+131/‑33)	bioA/rsmE	adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA/16S rRNA (uracil(1498)‑N(3))‑methyltransferase
*	?	NC_002947	5689117 =	88 (0.940)	7 (0.080)	7/246	NT	7.8%	coding (471/555 nt)	pilI	twitching motility protein PilI
	?	NC_002947	5689140 =	79 (0.860)					coding (448/555 nt)	pilI	twitching motility protein PilI
*	?	NC_002947	5692599 =	121 (1.300)	9 (0.100)	7/242	NT	7.2%	intergenic (+12/‑158)	PP_4994/PP_4995	hypothetical protein/exopolysaccharide biosynthesis protein
	?	NC_002947	5692701 =	115 (1.270)					intergenic (+114/‑56)	PP_4994/PP_4995	hypothetical protein/exopolysaccharide biosynthesis protein
*	?	NC_002947	5704565 =	100 (1.070)	7 (0.090)	6/198	NT	10.6%	intergenic (+34/+78)	PP_5006/PP_5007	TetR family transcriptional regulator/polyhydroxyalkanoate granule‑associated protein GA2
	?	NC_002947	5704628 =	39 (0.530)					intergenic (+97/+15)	PP_5006/PP_5007	TetR family transcriptional regulator/polyhydroxyalkanoate granule‑associated protein GA2
*	?	NC_002947	= 5712250	92 (0.990)	5 (0.050)	5/244	NT	5.2%	coding (263/624 nt)	PP_5012	hypothetical protein
	?	NC_002947	= 5712282	93 (1.020)					coding (295/624 nt)	PP_5012	hypothetical protein
*	?	NC_002947	5712267 =	91 (0.980)	8 (0.090)	6/230	NT	8.4%	coding (280/624 nt)	PP_5012	hypothetical protein
	?	NC_002947	5712309 =	91 (1.060)					coding (322/624 nt)	PP_5012	hypothetical protein
*	?	NC_002947	5721489 =	82 (0.880)	5 (0.060)	5/208	NT	6.4%	intergenic (+14/+96)	PP_5021/glnQ	methyl‑accepting chemotaxis transducer/glutamine transport ATP‑binding protein GlnQ
	?	NC_002947	5721574 =	78 (1.000)					intergenic (+99/+11)	PP_5021/glnQ	methyl‑accepting chemotaxis transducer/glutamine transport ATP‑binding protein GlnQ
*	?	NC_002947	= 5724339	32 (0.340)	14 (0.190)	11/202	NT	28.9%	intergenic (‑185/+109)	PP_5024/opgH	amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H
	?	NC_002947	= 5724358	43 (0.570)					intergenic (‑204/+90)	PP_5024/opgH	amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H
*	?	NC_002947	5733769 =	95 (1.020)	8 (0.090)	8/240	NT	7.9%	coding (262/1404 nt)	proY	proline (histidine) APC transporter
	?	NC_002947	5733783 =	95 (1.060)					coding (248/1404 nt)	proY	proline (histidine) APC transporter
*	?	NC_002947	= 5734113	59 (0.630)	12 (0.150)	8/220	NT	16.9%	intergenic (‑83/+74)	proY/hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
	?	NC_002947	= 5734136	66 (0.800)					intergenic (‑106/+51)	proY/hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
*	?	NC_002947	5743378 =	72 (0.770)	12 (0.140)	7/232	NT	12.8%	intergenic (‑155/+92)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	5743460 =	97 (1.120)					intergenic (‑237/+10)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
*	?	NC_002947	= 5743404	92 (0.990)	16 (0.190)	7/224	NT	15.0%	intergenic (‑181/+66)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	= 5743432	99 (1.180)					intergenic (‑209/+38)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
*	?	NC_002947	5751735 =	83 (0.890)	8 (0.090)	6/238	NT	9.9%	intergenic (‑117/‑354)	thiI/glnA	tRNA sulfurtransferase/glutamine synthetase
	?	NC_002947	5751793 =	66 (0.740)					intergenic (‑175/‑296)	thiI/glnA	tRNA sulfurtransferase/glutamine synthetase
*	?	NC_002947	5756570 =	109 (1.170)	5 (0.060)	4/240	NT	5.3%	intergenic (+191/‑497)	glnG/PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase
	?	NC_002947	5756612 =	74 (0.830)					intergenic (+233/‑455)	glnG/PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase
*	?	NC_002947	5759460 =	19 (0.200)	12 (0.170)	10/186	NT	55.6%	intergenic (+13/+143)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
	?	NC_002947	5759552 =	5 (0.070)					intergenic (+105/+51)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
*	?	NC_002947	= 5759491	19 (0.200)	11 (0.160)	8/186	NT	53.5%	intergenic (+44/+112)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
	?	NC_002947	= 5759519	5 (0.070)					intergenic (+72/+84)	trmL/secB	tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
*	?	NC_002947	= 5765441	120 (1.290)	7 (0.080)	6/236	NT	5.8%	coding (41/768 nt)	PP_5059	hypothetical protein
	?	NC_002947	= 5765457	114 (1.290)					coding (57/768 nt)	PP_5059	hypothetical protein
*	?	NC_002947	= 5783618	85 (0.910)	6 (0.070)	5/228	NT	7.1%	coding (2037/3309 nt)	kefA	intermediate mechanosensitive channel protein
	?	NC_002947	= 5783629	80 (0.940)					coding (2048/3309 nt)	kefA	intermediate mechanosensitive channel protein
*	?	NC_002947	5786528 =	76 (0.810)	6 (0.080)	6/202	NT	11.4%	intergenic (+15/‑116)	PP_5068/trxC	hypothetical protein/thioredoxin
	?	NC_002947	5786613 =	32 (0.420)					intergenic (+100/‑31)	PP_5068/trxC	hypothetical protein/thioredoxin
*	?	NC_002947	= 5796767	100 (1.070)	7 (0.080)	7/238	NT	6.8%	coding (1189/4446 nt)	gltB	L‑glutamate synthase subunit alpha
	?	NC_002947	= 5796785	96 (1.080)					coding (1171/4446 nt)	gltB	L‑glutamate synthase subunit alpha
*	?	NC_002947	5816910 =	24 (0.260)	23 (0.290)	14/214	NT	52.0%	intergenic (+40/+89)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	5816973 =	22 (0.280)					intergenic (+103/+26)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
*	?	NC_002947	= 5816927	24 (0.260)	15 (0.190)	11/214	NT	41.4%	intergenic (+57/+72)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
	?	NC_002947	= 5816954	22 (0.280)					intergenic (+84/+45)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
*	?	NC_002947	5817927 =	105 (1.130)	5 (0.060)	5/236	NT	5.1%	coding (83/1011 nt)	pilT	twitching motility protein
	?	NC_002947	5817979 =	88 (1.000)					coding (31/1011 nt)	pilT	twitching motility protein
*	?	NC_002947	5827662 =	80 (0.860)	8 (0.090)	8/240	NT	9.5%	coding (519/711 nt)	mtgA	monofunctional biosynthetic peptidoglycan transglycosylase
	?	NC_002947	5827692 =	75 (0.840)					coding (549/711 nt)	mtgA	monofunctional biosynthetic peptidoglycan transglycosylase
*	?	NC_002947	5827883 =	90 (0.960)	10 (0.120)	9/228	NT	10.5%	intergenic (+29/+170)	mtgA/rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
	?	NC_002947	5827967 =	89 (1.050)					intergenic (+113/+86)	mtgA/rpoH	monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32
*	?	NC_002947	5843194 =	82 (0.880)	7 (0.080)	6/240	NT	8.6%	coding (266/486 nt)	PP_5121	hypothetical protein
	?	NC_002947	5843224 =	70 (0.780)					coding (296/486 nt)	PP_5121	hypothetical protein
*	?	NC_002947	5845204 =	102 (1.090)	9 (0.100)	8/236	NT	8.8%	coding (59/486 nt)	coaD	phosphopantetheine adenylyltransferase
	?	NC_002947	5845235 =	90 (1.020)					coding (90/486 nt)	coaD	phosphopantetheine adenylyltransferase
*	?	NC_002947	= 5854121	91 (0.980)	9 (0.100)	9/246	NT	8.9%	coding (85/1392 nt)	tcyP	sodium/cystine symporter
	?	NC_002947	= 5854146	95 (1.030)					coding (110/1392 nt)	tcyP	sodium/cystine symporter
*	?	NC_002947	= 5856874	137 (1.470)	8 (0.090)	7/240	NT	5.6%	coding (745/1392 nt)	PP_5133	membrane protein
	?	NC_002947	= 5856913	139 (1.550)					coding (784/1392 nt)	PP_5133	membrane protein
*	?	NC_002947	= 5870345	63 (0.680)	7 (0.100)	7/192	NT	11.1%	intergenic (+50/+84)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
	?	NC_002947	= 5870380	64 (0.890)					intergenic (+85/+49)	PP_5144/ptsP	hypothetical protein/phosphoenolpyruvate‑dependent regulator
*	?	NC_002947	= 5874614	126 (1.350)	9 (0.110)	7/228	NT	7.1%	intergenic (‑50/+98)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
	?	NC_002947	= 5874674	119 (1.400)					intergenic (‑110/+38)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
*	?	NC_002947	5877040 =	128 (1.370)	13 (0.170)	9/202	NT	12.9%	intergenic (+6/+99)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	5877122 =	72 (0.950)					intergenic (+88/+17)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
*	?	NC_002947	5897799 =	46 (0.490)	13 (0.180)	10/196	NT	28.2%	intergenic (‑143/+91)	PP_5172/PP_5173	hypothetical protein/RND family transporter
	?	NC_002947	5897875 =	30 (0.410)					intergenic (‑219/+15)	PP_5172/PP_5173	hypothetical protein/RND family transporter
*	?	NC_002947	= 5903842	72 (0.770)	8 (0.100)	5/218	NT	10.5%	intergenic (+42/+65)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	= 5903870	73 (0.900)					intergenic (+70/+37)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
*	?	NC_002947	5914213 =	24 (0.260)	10 (0.140)	8/194	NT	44.8%	intergenic (+49/+104)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	5914309 =	6 (0.080)					intergenic (+145/+8)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5914240	21 (0.230)	15 (0.210)	9/194	NT	57.4%	intergenic (+76/+77)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	= 5914280	6 (0.080)					intergenic (+116/+37)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	= 5926884	103 (1.100)	8 (0.090)	8/234	NT	7.7%	coding (1067/1623 nt)	PP_5195	iron ABC transporter permease
	?	NC_002947	= 5926906	95 (1.090)					coding (1045/1623 nt)	PP_5195	iron ABC transporter permease
*	?	NC_002947	5934919 =	97 (1.040)	11 (0.130)	8/232	NT	12.0%	intergenic (+18/‑117)	PP_mr61/fau	6S ncRNA/5‑formyltetrahydrofolate cyclo‑ligase
	?	NC_002947	5934942 =	72 (0.830)					intergenic (+41/‑94)	PP_mr61/fau	6S ncRNA/5‑formyltetrahydrofolate cyclo‑ligase
*	?	NC_002947	5943657 =	67 (0.720)	7 (0.090)	6/206	NT	10.4%	intergenic (+9/+76)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
	?	NC_002947	5943722 =	65 (0.850)					intergenic (+74/+11)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
*	?	NC_002947	= 5943678	65 (0.700)	7 (0.090)	6/206	NT	10.6%	intergenic (+30/+55)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
	?	NC_002947	= 5943699	65 (0.850)					intergenic (+51/+34)	PP_5210/PP_5211	alcohol dehydrogenase/ChaC‑related protein
*	?	NC_002947	5947143 =	90 (0.960)	9 (0.110)	7/228	NT	8.5%	intergenic (‑79/+127)	ubiD/rho	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho
	?	NC_002947	5947248 =	111 (1.300)					intergenic (‑184/+22)	ubiD/rho	3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase/transcription termination factor Rho
*	?	NC_002947	= 5957517	79 (0.850)	6 (0.070)	6/240	NT	7.1%	coding (865/2856 nt)	cyaA	adenylate cyclase
	?	NC_002947	= 5957531	80 (0.890)					coding (879/2856 nt)	cyaA	adenylate cyclase
*	?	NC_002947	5958636 =	93 (1.000)	6 (0.070)	5/240	NT	6.3%	coding (1984/2856 nt)	cyaA	adenylate cyclase
	?	NC_002947	5958661 =	90 (1.000)					coding (2009/2856 nt)	cyaA	adenylate cyclase
*	?	NC_002947	5980299 =	112 (1.200)	6 (0.070)	5/246	NT	5.4%	coding (888/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
	?	NC_002947	5980337 =	100 (1.090)					coding (926/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
*	?	NC_002947	5981424 =	78 (0.840)	5 (0.060)	5/238	NT	6.4%	coding (2013/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
	?	NC_002947	5981454 =	73 (0.820)					coding (2043/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
*	?	NC_002947	= 5981467	77 (0.830)	14 (0.170)	11/226	NT	15.9%	coding (2056/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
	?	NC_002947	= 5981478	79 (0.940)					coding (2067/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
*	?	NC_002947	= 5987958	101 (1.080)	6 (0.070)	6/236	NT	5.7%	coding (984/1788 nt)	kefB‑III	glutathione‑regulated potassium/H+ antiporter
	?	NC_002947	= 5987978	103 (1.170)					coding (1004/1788 nt)	kefB‑III	glutathione‑regulated potassium/H+ antiporter
*	?	NC_002947	6000959 =	72 (0.770)	5 (0.070)	5/190	NT	10.8%	intergenic (+10/+99)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
	?	NC_002947	6001053 =	28 (0.390)					intergenic (+104/+5)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
*	?	NC_002947	6002402 =	115 (1.230)	11 (0.140)	8/218	NT	10.1%	intergenic (‑46/+100)	amaA/amaB	L‑pipecolate oxidase/L‑piperidine‑6‑carboxylate dehydrogenase
	?	NC_002947	6002454 =	96 (1.180)					intergenic (‑98/+48)	amaA/amaB	L‑pipecolate oxidase/L‑piperidine‑6‑carboxylate dehydrogenase
*	?	NC_002947	= 6002417	109 (1.170)	8 (0.100)	7/218	NT	7.7%	intergenic (‑61/+85)	amaA/amaB	L‑pipecolate oxidase/L‑piperidine‑6‑carboxylate dehydrogenase
	?	NC_002947	= 6002437	96 (1.180)					intergenic (‑81/+65)	amaA/amaB	L‑pipecolate oxidase/L‑piperidine‑6‑carboxylate dehydrogenase
*	?	NC_002947	= 6006630	18 (0.190)	10 (0.150)	8/178	NT	40.1%	intergenic (+42/+57)	ydcJ/PP_5261	metalloprotein/LysR family transcriptional regulator
	?	NC_002947	= 6006642	17 (0.260)					intergenic (+54/+45)	ydcJ/PP_5261	metalloprotein/LysR family transcriptional regulator
*	?	NC_002947	6009165 =	38 (0.410)	11 (0.160)	10/184	NT	42.3%	intergenic (+6/+76)	norM/PP_5263	multidrug resistance protein NorM/GGDEF domain‑containing protein
	?	NC_002947	6009242 =	2 (0.030)					coding (1667/1668 nt)	PP_5263	GGDEF domain‑containing protein
*	?	NC_002947	= 6013891	31 (0.330)	29 (0.400)	21/196	NT	54.1%	intergenic (+40/+70)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
	?	NC_002947	= 6013919	25 (0.340)					intergenic (+68/+42)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
*	?	NC_002947	= 6019326	70 (0.750)	5 (0.070)	3/204	NT	7.2%	intergenic (‑71/+74)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
	?	NC_002947	= 6019356	72 (0.950)					intergenic (‑101/+44)	dadX/dadA‑II	alanine racemase/D‑amino acid:quinone oxidoreductase
*	?	NC_002947	6032808 =	47 (0.500)	8 (0.120)	9/184	NT	31.0%	intergenic (+16/+120)	dppA‑IV/PP_5284	dipeptide transport protein/hypothetical protein
	?	NC_002947	6032890 =	1 (0.010)					intergenic (+98/+38)	dppA‑IV/PP_5284	dipeptide transport protein/hypothetical protein
*	?	NC_002947	6050814 =	104 (1.110)	5 (0.060)	5/238	NT	5.2%	coding (1620/2109 nt)	spoT	bifunctional (p)ppGpp synthase/hydrolase
	?	NC_002947	6050855 =	84 (0.950)					coding (1661/2109 nt)	spoT	bifunctional (p)ppGpp synthase/hydrolase
*	?	NC_002947	6060487 =	88 (0.940)	9 (0.110)	8/222	NT	9.8%	intergenic (+67/+114)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
	?	NC_002947	6060574 =	87 (1.050)					intergenic (+154/+27)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
*	?	NC_002947	= 6060500	89 (0.950)	7 (0.080)	6/222	NT	7.8%	intergenic (+80/+101)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
	?	NC_002947	= 6060559	87 (1.050)					intergenic (+139/+42)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
*	?	NC_002947	= 6077900	86 (0.920)	7 (0.090)	4/202	NT	9.9%	intergenic (‑146/+92)	PP_5329/PP_5330	phosphate ABC transporter substrate‑binding protein/MFS transporter
	?	NC_002947	= 6077952	58 (0.770)					intergenic (‑198/+40)	PP_5329/PP_5330	phosphate ABC transporter substrate‑binding protein/MFS transporter
*	?	NC_002947	6082690 =	106 (1.140)	6 (0.070)	7/230	NT	6.0%	coding (400/1083 nt)	purK	5‑(carboxyamino)imidazole ribonucleotide synthase
	?	NC_002947	6082731 =	90 (1.050)					coding (359/1083 nt)	purK	5‑(carboxyamino)imidazole ribonucleotide synthase
*	?	NC_002947	6087630 =	98 (1.050)	5 (0.060)	5/222	NT	6.6%	intergenic (+25/‑205)	oruR/aphA	ornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase
	?	NC_002947	6087692 =	55 (0.660)					intergenic (+87/‑143)	oruR/aphA	ornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase
*	?	NC_002947	6110579 =	89 (0.950)	5 (0.060)	4/240	NT	5.6%	coding (987/1209 nt)	PP_5361	protein P47K
	?	NC_002947	6110619 =	84 (0.940)					coding (947/1209 nt)	PP_5361	protein P47K
*	?	NC_002947	6131500 =	95 (1.020)	8 (0.090)	8/238	NT	8.4%	coding (78/1080 nt)	copB‑II	copper resistance protein B
	?	NC_002947	6131522 =	85 (0.960)					coding (56/1080 nt)	copB‑II	copper resistance protein B
*	?	NC_002947	= 6141509	106 (1.140)	6 (0.070)	4/232	NT	5.5%	coding (1189/3159 nt)	cusA	CzcA family RND family copper transporter
	?	NC_002947	= 6141531	107 (1.240)					coding (1211/3159 nt)	cusA	CzcA family RND family copper transporter
*	?	NC_002947	= 6152896	170 (1.820)	11 (0.130)	7/234	NT	6.4%	coding (421/489 nt)	PP_5738	hypothetical protein
	?	NC_002947	= 6152922	162 (1.850)					coding (447/489 nt)	PP_5738	hypothetical protein
*	?	NC_002947	6178276 =	193 (2.070)	10 (0.110)	10/242	NT	5.5%	coding (858/1545 nt)	atpA	ATP synthase subunit alpha
	?	NC_002947	6178305 =	154 (1.700)					coding (829/1545 nt)	atpA	ATP synthase subunit alpha