New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | USA300TCH1516_ALE | = 2541819 | 263 (0.920) | 15 (0.060) | 10/136 | NT | 5.6% | intergenic (+78/‑422) | sbi/hlgA | Immunoglobulin‑binding protein sbi/Gamma‑hemolysin component A |
? | USA300TCH1516_ALE | = 2541837 | 280 (1.150) | intergenic (+96/‑404) | sbi/hlgA | Immunoglobulin‑binding protein sbi/Gamma‑hemolysin component A |
Only 100 of 117 total aligned reads displayed.
ATTTATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/2541719‑2541819 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaagaaccgtAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATATTTT < USA300TCH1516_ALE/2541837‑2541749 ATTTATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAA < 2:1229707/91‑1 TTTATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAA > 1:1154556/1‑91 TTTATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAA < 2:2944321/91‑1 TTTATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAA < 2:2944335/91‑1 TTATTATCATTCTGGAAATAATCATTCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAA > 1:5461482/1‑91 TTATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAA > 2:2448337/1‑91 TTATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAA > 1:1588939/1‑91 TTATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAA > 2:736237/1‑91 TTATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAA < 1:3009400/91‑1 TATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAA > 1:1219656/1‑91 TATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAA > 1:5331386/1‑91 TATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAA > 1:2222023/1‑91 ATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAG > 2:902041/1‑91 ATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAG > 1:3713644/1‑91 ATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAG < 1:1966195/91‑1 ATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAG > 1:1401074/1‑91 ATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCACTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAG < 2:3316525/91‑1 TTATCATTCTGGGAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGA < 2:3645114/91‑1 TTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGA < 2:4971073/91‑1 TATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAA > 1:684862/1‑91 TATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAA < 2:2649823/91‑1 TATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAA < 1:3935693/91‑1 ATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAAC > 1:2070624/1‑91 ATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAAC < 1:2070653/91‑1 ATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAAC > 1:3091462/1‑91 ATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAAC > 1:3991833/1‑91 TCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAGTTTTCGTAACAAACCGTGATTAAAAAGAACC < 1:5529015/91‑1 TCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACC < 1:4942349/91‑1 TCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACC < 2:3571399/91‑1 TCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACC < 1:4037834/91‑1 TCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACC < 1:4942309/91‑1 TCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACC < 2:2339798/91‑1 TCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACC < 2:2339818/91‑1 TCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACC < 2:4713050/91‑1 TCATTCTGGAAATAAACAAACAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACC < 2:1025783/91‑1 CATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCG < 1:1940907/91‑1 CATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCG < 1:3840393/91‑1 CATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCG > 2:4536093/1‑91 CATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATGAAAAAGAACCG > 2:5657163/1‑91 ATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGT > 2:182207/1‑91 ATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGT < 2:1353482/91‑1 ATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGT < 2:3419911/91‑1 ATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGT > 2:3657403/1‑91 ATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGT > 2:4042703/1‑91 AATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTAGATTCGATTG < 1:801104/91‑1 TCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTAGATTCGATTGAG < 2:3565871/91‑1 TCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTAGATTCGATTGAG < 2:2223464/91‑1 TCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTAGATTCGATTGAG < 1:2165017/91‑1 AATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTAGATTCGATTGAGAA < 1:278068/91‑1 TCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTAGATTCGATTGAGAATC < 2:3880401/91‑1 CAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTAGATTCGATTGAGAATCA < 2:3024703/91‑1 TTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTT < 1:1175794/91‑1 TTTTACATCATTTTTTAAATAATTTTCGTAACAAACCTTGATTAAAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCAC < 2:2333510/91‑1 TTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCAC < 1:1391291/91‑1 TTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGG < 1:4815012/91‑1 AAAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAG > 2:2356307/1‑91 AAAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAG > 2:3451396/1‑91 AAAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAG > 2:3195136/1‑91 AAAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAG > 1:4172939/1‑91 AAAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAG < 1:3173728/91‑1 AAAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAG > 2:4124125/1‑91 AAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAACCTAGAGA > 2:4928366/1‑91 AAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGA < 2:852770/91‑1 AAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGA > 2:4663383/1‑91 AAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGA < 1:1066920/91‑1 AAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGA < 1:5320339/91‑1 AAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGA > 1:4974708/1‑91 AAAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGA < 1:2451349/91‑1 AAAAGAACCGTAGATTCGATTGAGAATCAACGGTCCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGA < 1:1066546/91‑1 AAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAA < 1:3303236/91‑1 AAAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAA > 1:350563/1‑91 AAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAG < 1:761526/91‑1 AAGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGACGTAAAACTAGAGAAG > 2:4353906/1‑91 AGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGA < 2:5574223/91‑1 AGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGA < 1:2245055/91‑1 AGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGA > 2:3710446/1‑91 AGAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGA < 2:3693516/91‑1 GAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGAT < 2:918891/91‑1 GAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGAT > 2:1417730/1‑91 GAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGAT > 2:5121277/1‑91 GAACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGAT < 2:3319950/91‑1 GAACCGTAGATTCGACTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGAT < 2:3901686/91‑1 AACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATA < 1:2454363/91‑1 ACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATAT > 2:1320414/1‑91 ACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATAT < 1:2931576/91‑1 ACCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATAT > 1:2283906/1‑91 CCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGTAGATATT > 1:4474851/1‑91 CCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATATT < 1:4199572/91‑1 CCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATATT > 2:2909625/1‑91 CCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATATT < 2:2981082/91‑1 CCGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATATT < 1:2845952/91‑1 CGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATATTT > 1:4582987/1‑91 CGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATATTT > 2:3441459/1‑91 CGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATATTT > 1:174770/1‑91 CGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATATTT < 1:1414649/91‑1 CGTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATATTT < 1:3786428/91‑1 CGTAGATACGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATATTT < 1:4497552/91‑1 GTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATATTTT > 1:5082945/1‑91 GTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATATTTT < 1:1750301/91‑1 GTAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATATTTT > 1:3489876/1‑91 ATTTATTATCATTCTGGAAATAATCAATCAAAAATATCTTCTCTAGTTTTACATCATTTTTTAAATAATTTTCGTAACAAACCGTGATTAAAAAGAACCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/2541719‑2541819 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaagaaccgtAGATTCGATTGAGAATCAACGGTTCTTTTTAATCACGGTTTGTTACGAAAATTATTTAAAAAATGATGTAAAACTAGAGAAGATATTTT < USA300TCH1516_ALE/2541837‑2541749 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |