New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000731 34 =387 (0.340)44 (0.040) 16/146 NT 8.5% intergenic (–/‑198) –/repA –/replication protein A
?CP000731 65 = 597 (0.580)intergenic (–/‑167) –/repA –/replication protein A

Only 100 of 1461 total aligned reads displayed.

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTANAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAAT  >  CP000731/1‑124
                                                                                          |                                                                                          
tatttatcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACaaa                                                                                            >  2:3831997‑M1/58‑91 (MQ=255)
gatttaggtgcttgcactaagatattattcattatataatacaagtatcgaaaattatataaataaacagtttctaaacgttttattacca                                                                                            >  2:88210‑M1/91‑91 (MQ=255)
 atttatcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACaaaa                                                                                           <  2:1025162‑M1/35‑1 (MQ=255)
 atttatcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACaaaa                                                                                           <  2:4145092‑M1/35‑1 (MQ=255)
  tttaggtgcttgcactaagatattattcattatataatacaagtatcgaaaattatataaataaacagtttctaaacgttttattaccaaa                                                                                          <  1:3843893‑M1/3‑1 (MQ=255)
   ttatcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAAc                                                                                         >  2:4888880‑M1/55‑91 (MQ=255)
    taggtgcttgcactaaaatattattcattatataatacaagtatcgaaaattatataaataaacagtttctaaacgttttattaccAAAcc                                                                                        >  2:1285461‑M1/87‑91 (MQ=255)
     atcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAAccc                                                                                       <  1:2244208‑M1/39‑1 (MQ=255)
     aggtgcttgcactaagatattattcattatataatacaagtatcgaaaattatataaataaacagtttctaaacgttttattaccAAAccc                                                                                       >  1:497485‑M1/86‑91 (MQ=255)
     aggtgcttgcactaagatattattcattatataatacaagtatcgaaaattatataaataaacagtttctaaacgttttattaccAAAccc                                                                                       <  1:5058253‑M1/6‑1 (MQ=255)
      tcaagggtttatacacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAAcccc                                                                                      <  2:5504702‑M1/40‑1 (MQ=255)
      tcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAGAAcccc                                                                                      <  2:5171565‑M1/40‑1 (MQ=255)
      tcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAAcccc                                                                                      >  1:2871126‑M1/52‑91 (MQ=255)
      tcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATAAAACAAAAAcccc                                                                                      <  2:3745230‑M1/40‑1 (MQ=255)
      ggtgcttgcactaagatattattcattatataatacaagtatcgaaaattatataaataaacagtttctaaacgttttattaccAAAcccc                                                                                      >  2:4054845‑M1/85‑91 (MQ=255)
      ggtgcttgcactaagatattattcattatataatacaagtatcgaaaattatataaataaacagtttctaaacgttttattaccAAAcccc                                                                                      >  1:4921064‑M1/85‑91 (MQ=255)
      ggtgcttgcactaagatattattcattatataatacaagtatcgaaaattatataaataaacagtttctaaacgttttattaccAAAcccc                                                                                      <  1:4145092‑M1/7‑1 (MQ=255)
      ggtgcttgcactaagatattattcattatataatacaagtatcgaaaattatataaataaacagtttctaaacgttttattaccAAAcccc                                                                                      >  2:2375082‑M1/85‑91 (MQ=255)
      ggtgcttgcactaagatattattcattatataatacaagtatcgaaaattatataaataaacagtttctaaacgttttattaccAAAcccc                                                                                      >  2:3021395‑M1/85‑91 (MQ=255)
      ggtgcttgcactaagatattattcattatataatacaagtatcgaaaattatataaataaacagtttctaaacgttttattaccAAAcccc                                                                                      <  2:5333038‑M1/7‑1 (MQ=255)
      ggtgcttgcactaagatattattcattatataatacaagtatcgaaaattatataaataaacagtttctaaacgttttattaccAAAcccc                                                                                      >  2:5089727‑M1/85‑91 (MQ=255)
       caagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCa                                                                                     <  1:27335‑M1/41‑1 (MQ=255)
          gggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAact                                                                                  <  1:3043189‑M1/44‑1 (MQ=255)
           ggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAacta                                                                                 <  2:1164755‑M1/45‑1 (MQ=255)
            ttttataaacccttgataaagctatattttcccttttataagtttATGTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAactac                                                                                >  2:4571745‑M1/46‑91 (MQ=255)
            gtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAactac                                                                                <  2:808621‑M1/46‑1 (MQ=255)
            gtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAactac                                                                                <  1:4833771‑M1/46‑1 (MQ=255)
               tataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTgg                                                                             <  1:3930530‑M1/49‑1 (MQ=255)
                ataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGt                                                                            >  1:2351753‑M1/42‑91 (MQ=255)
                ataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGt                                                                            <  1:2120255‑M1/50‑1 (MQ=255)
                ataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGt                                                                            <  1:5294293‑M1/50‑1 (MQ=255)
                 taaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTa                                                                           >  2:2774136‑M1/41‑91 (MQ=255)
                 taaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTa                                                                           >  2:3926816‑M1/41‑91 (MQ=255)
                  aaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTaa                                                                          >  1:200103‑M1/40‑91 (MQ=255)
                  aaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTaa                                                                          <  1:2525343‑M1/52‑1 (MQ=255)
                    gatattattcattatataatacaagtatcgaaaattatataaataaacagtttctaaacgttttattaccAAACCCCAACTACTGGTAATa                                                                        >  2:646775‑M1/71‑91 (MQ=255)
                     cccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAg                                                                       <  1:5134551‑M1/55‑1 (MQ=255)
                      ccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGt                                                                      >  1:1546873‑M1/36‑91 (MQ=255)
                       cttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTc                                                                     <  2:706637‑M1/57‑1 (MQ=255)
                         tgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCgg                                                                   <  1:5593198‑M1/59‑1 (MQ=255)
                         tgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCgg                                                                   <  2:2837946‑M1/59‑1 (MQ=255)
                          gataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCggg                                                                  >  1:1314579‑M1/32‑91 (MQ=255)
                          gataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCggg                                                                  <  1:614092‑M1/60‑1 (MQ=255)
                          gataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCggg                                                                  <  2:3568423‑M1/60‑1 (MQ=255)
                          aataaagctatattttccctttcatacatttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCggg                                                                  >  2:5566337‑M1/32‑91 (MQ=255)
                            taaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGt                                                                >  2:3993754‑M1/30‑91 (MQ=255)
                             aaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGtt                                                               <  2:3487835‑M1/63‑1 (MQ=255)
                               agctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACCAAAACCCCAACTACTGGTAATAGTCGGGgtttt                                                             <  2:5618175‑M1/65‑2 (MQ=255)
                               agctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTg                                                             <  2:1500342‑M1/65‑1 (MQ=255)
                                 ctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGt                                                           <  2:3128494‑M1/67‑1 (MQ=255)
                                   atattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGtaa                                                         >  2:3668708‑M1/23‑91 (MQ=255)
                                   atattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGtaa                                                         >  2:2604815‑M1/23‑91 (MQ=255)
                                    taatacaagtatcgaaaattatataaataaacagtttctaaacgttttattaccAAACCCCAACTACTGGTAATAGTCGGGGTTTGGtaat                                                        >  1:1113046‑M1/55‑91 (MQ=255)
                                     attttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGtaata                                                       <  1:2188327‑M1/71‑1 (MQ=255)
                                      ttttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATCACAAAAACCCCAACTACTGGTAATAGCCGGGGTTTGGtactaa                                                      <  1:3220722‑M1/72‑1 (MQ=255)
                                      ttttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGtaataa                                                      <  1:1208694‑M1/72‑1 (MQ=255)
                                      ttttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGtaataa                                                      <  1:540682‑M1/72‑1 (MQ=255)
                                        ttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATaaaa                                                    <  1:2606154‑M1/74‑1 (MQ=255)
                                         tcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAAc                                                   >  1:3336106‑M1/17‑91 (MQ=255)
                                              tttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTa                                              <  1:3682260‑M1/80‑1 (MQ=255)
                                               ttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTtag                                             <  2:610060‑M1/81‑2 (MQ=255)
                                                tataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGa                                            <  1:4570329‑M1/82‑1 (MQ=255)
                                                tataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGa                                            >  2:1768983‑M1/10‑91 (MQ=255)
                                                tataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGa                                            >  2:444750‑M1/10‑91 (MQ=255)
                                                   aagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAAc                                         >  1:2408077‑M1/7‑91 (MQ=255)
                                                   aagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAAc                                         >  1:1432437‑M1/7‑91 (MQ=255)
                                                    agtttATCTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACt                                        >  1:4493063‑M1/6‑91 (MQ=255)
                                                     gtttATTTAAAGTGCTATAATAAACTTAATATAACAACAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTg                                       >  1:1680072‑M1/5‑91 (MQ=255)
                                                      tttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGt                                      >  1:3551462‑M1/4‑91 (MQ=255)
                                                      tttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGt                                      <  1:3743133‑M1/88‑1 (MQ=255)
                                                      tttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGt                                      <  1:1890587‑M1/88‑1 (MQ=255)
                                                       ttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGtt                                     <  2:4319184‑M1/89‑1 (MQ=255)
                                                        tATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGCGGTTTGGTAATAAAACGTTTAGAAACTGttt                                    >  1:5514839‑M1/2‑91 (MQ=255)
                                                          tttAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGtttat                                  >  2:2496645/1‑91 (MQ=255)
                                                          tttAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGtttat                                  >  1:877766/1‑91 (MQ=255)
                                                           ttAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGtttatt                                 <  1:813247/91‑1 (MQ=255)
                                                            tAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGtttattt                                <  2:2243865/91‑1 (MQ=255)
                                                             aaaGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGtttattta                               <  1:4238703/91‑1 (MQ=255)
                                                             aaaGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGtttattta                               <  1:3115812/91‑1 (MQ=255)
                                                              aaGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTttatttat                              <  1:4007495/91‑1 (MQ=255)
                                                              aaGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTttatttat                              >  2:4770389/1‑91 (MQ=255)
                                                              aaGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTttatttat                              <  1:1004512/91‑1 (MQ=255)
                                                               aGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTtata                             >  2:3256489/1‑91 (MQ=255)
                                                               aGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTtata                             >  2:2164995/1‑91 (MQ=255)
                                                                gTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTtatat                            <  2:2087743/91‑1 (MQ=255)
                                                                gTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTtatat                            <  1:17808/91‑1 (MQ=255)
                                                                gTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTtatat                            <  2:2931865/91‑1 (MQ=255)
                                                                     ataataAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAAttt                       <  1:704800/91‑1 (MQ=255)
                                                                     ataataAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAAttt                       <  2:336258/91‑1 (MQ=255)
                                                                       aataaACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTc                     <  1:3458710/91‑1 (MQ=255)
                                                                            aCTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATAc                >  2:4665659/1‑91 (MQ=255)
                                                                              ttAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACtt              >  2:1980166/1‑91 (MQ=255)
                                                                               tAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTg             <  2:1363750/91‑1 (MQ=255)
                                                                                 ctataACAAAACCCCCAACTACTGGAAAAATTCGGGGTTTGGTAATAAAACGCCTGGAAACTGTTTATTTATATAATTTTCGATACTTGta           >  2:5419322/2‑91 (MQ=255)
                                                                                 aactaACAAAAACCCCAAATACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGta           <  1:4738226/88‑1 (MQ=255)
                                                                                  tataACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtat          >  2:1881436/1‑91 (MQ=255)
                                                                                    taACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtatta        >  1:5204493/1‑91 (MQ=255)
                                                                                     aagaaaaaCCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtattat       <  2:4991327/88‑1 (MQ=255)
                                                                                      aCAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATtata      >  2:1669654/1‑91 (MQ=255)
                                                                                          AAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAAt  >  1:43439‑M1/1‑91 (MQ=255)
                                                                                          |                                                                                          
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTANAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAAT  >  CP000731/1‑124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.