New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000731 = 4373310 (0.270)234 (0.050) 31/148 NT 21.6% intergenic (+338/‑127) USA300HOU_pUSA300HOUMR0006/cadR hypothetical protein/cadmium binding protein
?NC_012417 = 1986 1408 (0.170)intergenic (+219/+107) USA300HOU_RS14895/USA300HOU_RS14900 hypothetical protein/hypothetical protein

Only 100 of 1158 total aligned reads displayed.

TGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAGTTA  >  CP000731/4283‑4463
                                                                                          |                                                                                          
tGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG                                                                                            <  2:2834957‑M1/91‑1 (MQ=255)
tGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG                                                                                            >  1:2125029‑M1/1‑91 (MQ=255)
 gCCGAAAAAATTTATTGATGTTGAGAAGACCCCTTCACTAAACTTGCAGACGAATGTCGGCATAGCGTGCGCTATTAAGCCGACCATTCGc                                                                                           >  2:5004845‑M1/1‑90 (MQ=255)
                         gaagaaCCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGacaagtttagttaagggttcttctc                                                                   >  1:3015610‑M1/1‑66 (MQ=255)
                             aaCCCTTAACTAAACTTGCAGACGAATGTCGGCACAGCGTGAGCTATTAAGCCGACCATTCGactgcaagtttagttaagggttcttctca                                                               >  2:3348051‑M1/1‑62 (MQ=255)
                                               cAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGacaagtttagttaagggttcttctcaacatcaataaattttctcggc                                             >  1:4435901‑M1/1‑44 (MQ=255)
                                               cAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGacaagtttagttaagggttcttctcaacatcaataaattttctcggc                                             >  1:1737616‑M1/1‑44 (MQ=255)
                                               cAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATCCGacaagtttagttaagggttcttctcaacatcaataaattttctcggc                                             >  2:3795653‑M1/1‑44 (MQ=255)
                                                aGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGacaagtttagttaagggttcttctcaacatcaataaattttctcggca                                            >  2:1811017‑M1/1‑43 (MQ=255)
                                                     aaTGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcata                                       >  1:2231954‑M1/1‑38 (MQ=255)
                                                     aaTGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcata                                       >  1:4983578‑M1/1‑38 (MQ=255)
                                                         tCGGCATAGCGTGAGCTATTAAGCCGACCATTCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatg                                   >  1:2952609‑M1/1‑34 (MQ=255)
                                                         tCGGCATAGCGTGAGCTATTAAGCCGACCATTCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatg                                   >  2:3582501‑M1/1‑34 (MQ=255)
                                                         tCGGCATAGCGTGAGCTATTAAGCCGACCATTCGactgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatg                                   >  2:4731641‑M1/1‑34 (MQ=255)
                                                             cATAGCGTGAGCTATTAAGCCGACCATTCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataagtgcgtc                               >  1:4726482‑M1/1‑30 (MQ=255)
                                                             cATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAg                               >  1:2047492/1‑91 (MQ=31)
                                                             cATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAg                               <  1:3791354/91‑1 (MQ=31)
                                                             cATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTACGAGGCTCAACGTCAATAAAGCAATGGGAATAAAg                               <  2:2011380/91‑1 (MQ=9)
                                                             cATAGCGTGAGCTATTAAGCCGACATTCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcg                              >  1:1794781‑M1/1‑29 (MQ=255)
                                                              aTAGCGTGAGCTATTAAGCCGACCATTCGacaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtct                              >  1:2660423‑M1/1‑29 (MQ=255)
                                                               tAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCa                             >  1:2355402/1‑91 (MQ=33)
                                                               tAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCa                             >  2:5571938/1‑91 (MQ=33)
                                                                aGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCAc                            >  2:1415954/1‑91 (MQ=34)
                                                                 gCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCAcc                           <  2:3231685/91‑1 (MQ=35)
                                                                 gCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCAcc                           <  2:4935189/91‑1 (MQ=35)
                                                                 gCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCAcc                           >  1:4335823/1‑91 (MQ=35)
                                                                 gCGTGAGCTATTAAGCCGACCAGTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCAcc                           <  2:2322043/91‑1 (MQ=25)
                                                                  cGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCt                          <  1:2872713/91‑1 (MQ=37)
                                                                   gTGAGCTATTAAGCCGACCATTCGtctgcaagtttagttaagggttcttctcaacatcaataaattttttcggcataaatgcgtgtctatg                         >  2:2419603‑M1/1‑24 (MQ=255)
                                                                     gAGCTATTAAGCCGTCCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTGAATAAAGCAATTGGAATAAGGCACCTATg                       <  1:5191804/91‑1 (MQ=14)
                                                                     gAGCTATTAAGCCGACCATTCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattt                       >  1:1005911‑M1/1‑22 (MQ=255)
                                                                     gAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAGAGCACCTATg                       <  2:2117011/91‑1 (MQ=255)
                                                                     gAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATg                       <  2:3066409/91‑1 (MQ=40)
                                                                     gAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATg                       <  1:1229558/91‑1 (MQ=40)
                                                                     gAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATg                       >  2:4549461/1‑91 (MQ=40)
                                                                      aGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGa                      <  2:1515862/91‑1 (MQ=255)
                                                                      aGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGa                      <  1:3329344/91‑1 (MQ=255)
                                                                      aGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTCGAATAAAGCACCTATGa                      <  2:2618812/91‑1 (MQ=255)
                                                                      aGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGCGTTCCGATGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGa                      >  2:4048843/1‑91 (MQ=255)
                                                                         tATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGatta                   <  2:3144114/91‑1 (MQ=255)
                                                                           ttAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGattatt                 >  2:53403/1‑91 (MQ=255)
                                                                            tAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTAttt                >  1:650460/1‑91 (MQ=255)
                                                                                 cGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTaaaaa           <  1:4148594/91‑1 (MQ=255)
                                                                                  gACCATTCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttca          >  2:2524018‑M1/1‑9 (MQ=255)
                                                                                  gACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAat          >  1:583766/1‑91 (MQ=255)
                                                                                   aCCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAata         >  1:454918/1‑91 (MQ=255)
                                                                                   aCCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAata         >  2:1593608/1‑91 (MQ=255)
                                                                                    ccATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAatat        >  1:4650209/1‑91 (MQ=255)
                                                                                     cATTCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatga       >  2:1913793‑M1/1‑6 (MQ=255)
                                                                                     cATTCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatga       >  1:3410696‑M1/1‑6 (MQ=255)
                                                                                      aTTCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataactgcgtcgtctattttttattatcttcatgat      <  1:5520635‑M1/91‑87 (MQ=255)
                                                                                      aTTCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgat      >  1:1114971‑M1/1‑5 (MQ=255)
                                                                                      aTTCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgat      >  1:3140330‑M1/1‑5 (MQ=255)
                                                                                      aTTCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgat      <  1:481667‑M1/91‑87 (MQ=255)
                                                                                       ttCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgata     <  1:1944205‑M1/91‑88 (MQ=255)
                                                                                       ttCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgata     >  1:2470402‑M1/1‑4 (MQ=255)
                                                                                       ttCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgata     <  2:3853489‑M1/91‑88 (MQ=255)
                                                                                       ttCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgata     >  2:3934523‑M1/1‑4 (MQ=255)
                                                                                       ttCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgata     <  1:4920327‑M1/91‑88 (MQ=255)
                                                                                       ttCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgata     <  1:1880668‑M1/91‑88 (MQ=255)
                                                                                       ttCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAg     <  2:4641968/91‑1 (MQ=255)
                                                                                       ttCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAg     >  1:1581463/1‑91 (MQ=255)
                                                                                       ttCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAg     >  2:5407997/1‑91 (MQ=255)
                                                                                       ttCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAg     <  1:1343228/91‑1 (MQ=255)
                                                                                       aatgtcggcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgata     >  2:1693760‑M1/4‑4 (MQ=255)
                                                                                        tCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataa    >  1:2574463‑M1/1‑3 (MQ=255)
                                                                                        tCGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataa    >  1:3485694‑M1/1‑3 (MQ=255)
                                                                                        tCGtctgcaagtttagttaaggattcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataa    >  2:4303845‑M1/1‑3 (MQ=255)
                                                                                         cGtctgtaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   <  2:2729933‑M1/91‑90 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   <  1:1642823‑M1/91‑90 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   <  2:1029458‑M1/91‑90 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   <  2:5105647‑M1/91‑90 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   >  1:1505175‑M1/1‑2 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   <  1:2777640‑M1/91‑90 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   >  2:610446‑M1/1‑2 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   <  1:3608218‑M1/91‑90 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   <  1:4049827‑M1/91‑90 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   <  2:1148109‑M1/91‑90 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   <  2:1301087‑M1/91‑90 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   >  1:731197‑M1/1‑2 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   >  1:3238260‑M1/1‑2 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   >  1:5263643‑M1/1‑2 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   >  1:5353090‑M1/1‑2 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaacgcgtcgtctattttttattatcttcatgataat   <  1:5621002‑M1/91‑90 (MQ=255)
                                                                                         cGtctgcaagtttagttaagggttcttctcaacataaataaattttctcggcataactgcgtcgtatattttttcttatcttcctgatact   <  2:868598‑M1/91‑90 (MQ=255)
                                                                                         cGtctgcaagttcagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataat   <  2:3631676‑M1/91‑90 (MQ=255)
                                                                                          gtctgcaagtttagttacgggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatc  >  1:4274590‑M1/1‑1 (MQ=255)
                                                                                          gtctgcaagtttagttaagggttcttctcaacattaataaattttctcggcataaatgcgtcgtctattttttattatcatgaagataata  <  2:701902‑M1/91‑91 (MQ=255)
                                                                                          gtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatc  <  1:50750‑M1/91‑91 (MQ=255)
                                                                                          gtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatc  >  1:822201‑M1/1‑1 (MQ=255)
                                                                                          gtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatc  >  2:123093‑M1/1‑1 (MQ=255)
                                                                                          gtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatc  <  1:5423631‑M1/91‑91 (MQ=255)
                                                                                          gtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatc  <  2:443215‑M1/91‑91 (MQ=255)
                                                                                          gtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatc  >  2:2208672‑M1/1‑1 (MQ=255)
                                                                                          gtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatc  >  2:4170144‑M1/1‑1 (MQ=255)
                                                                                          gtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatc  <  1:2401327‑M1/91‑91 (MQ=255)
                                                                                          gtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatc  >  1:3970994‑M1/1‑1 (MQ=255)
                                                                                          gtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatc  >  2:3447938‑M1/1‑1 (MQ=255)
                                                                                          gtctgcaagtttagttaagggttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatc  >  2:2949250‑M1/1‑1 (MQ=255)
                                                                                          gtctgcaagtttagttaagggttcttcccaacatcaataatttttctcggcataaatgcgtcgtctattttttattatcttcatgataatc  >  2:518708‑M1/1‑1 (MQ=255)
                                                                                          |                                                                                          
TGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAGTTA  >  CP000731/4283‑4463

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.