BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000731	34 =	387 (0.340)	44 (0.040)	16/146	NT	8.5%	intergenic (–/‑198)	–/repA	–/replication protein A
*	?	CP000731	65 =	597 (0.580)	44 (0.040)	16/146	NT	8.5%	intergenic (–/‑167)	–/repA	–/replication protein A

Only 100 of 1385 total aligned reads displayed.

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTANAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCA  >  CP000731/1‑155

agctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTg                                                                                            <  2:4144598‑M1/65‑1 (MQ=255)

  ctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGt                                                                                          >  1:3090499‑M1/25‑91 (MQ=255)

     tattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGtaat                                                                                       >  1:5127594‑M1/22‑91 (MQ=255)

       ttttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGtaataa                                                                                     <  2:4527344‑M1/72‑1 (MQ=255)

         ttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATaaaa                                                                                   <  1:15538‑M1/74‑1 (MQ=255)

           cccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACg                                                                                 >  1:1165068‑M1/16‑91 (MQ=255)

           cccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACg                                                                                 <  2:3703304‑M1/76‑1 (MQ=255)

            ccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGt                                                                                <  1:1110458‑M1/77‑1 (MQ=255)

            ccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGt                                                                                >  1:2117678‑M1/15‑91 (MQ=255)

            ccttttataagtttATTTAAAGTGCTATAATAAACTTAACATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGt                                                                                <  1:5045019‑M1/77‑1 (MQ=255)

             cttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGtt                                                                               <  1:4975711‑M1/78‑1 (MQ=255)

             cttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGtt                                                                               >  1:752477‑M1/14‑91 (MQ=255)

              ttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGttt                                                                              >  2:3394198‑M1/13‑91 (MQ=255)

               tttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTa                                                                             <  1:5311837‑M1/80‑1 (MQ=255)

                 ttttagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAATACGTTTAGa                                                                           <  2:3502617‑M1/82‑1 (MQ=255)

                 tataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGa                                                                           >  1:2408024‑M1/10‑91 (MQ=255)

                 tataagtttATTTAAAGTGCTATAAAAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGCTAATAAAATGTTTAGa                                                                           <  2:5375886‑M1/82‑1 (MQ=255)

                  ataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGaa                                                                          <  1:2770465‑M1/83‑1 (MQ=255)

                  ataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGaa                                                                          <  2:4941217‑M1/83‑1 (MQ=255)

                    aagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAAc                                                                        >  1:3421683‑M1/7‑91 (MQ=255)

                     agtttATTTAAAGTGCTATAATAAACTTAAGATAACAAAAAACCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACt                                                                       <  2:3807606‑M1/86‑1 (MQ=255)

                       tttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGt                                                                     >  1:3551462‑M1/4‑91 (MQ=255)

                        ttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATACAACGTTTCGAAACTGtt                                                                    <  2:3649477‑M1/89‑1 (MQ=255)

                         tATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGttt                                                                   >  2:2685089‑M1/2‑91 (MQ=255)

                         tATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGttt                                                                   <  1:3927134‑M1/90‑1 (MQ=255)

                           tttAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGtttat                                                                 >  2:1496833/1‑91 (MQ=255)

                               aaGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTttatttat                                                             <  1:1004512/91‑1 (MQ=255)

                               aaGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTttatttat                                                             <  1:855115/91‑1 (MQ=255)

                               aaGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTttatttat                                                             >  2:4770389/1‑91 (MQ=255)

                               aaGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTttatttat                                                             <  1:2578746/91‑1 (MQ=255)

                                   gCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATaa                                                         >  2:1622764/1‑91 (MQ=255)

                                   gCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATaa                                                         <  2:2947928/91‑1 (MQ=255)

                                   gCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATaa                                                         >  2:1084836/1‑91 (MQ=255)

                                    cagtttctaaacgttttattaccaaaccccgactattaccagtagttggggtttGGTAATAAAACGTTTAGAAACTGTTTATTTATATAAt                                                        >  1:646226‑M2/55‑91 (MQ=255)

                                    cTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAAt                                                        >  2:755398/1‑91 (MQ=255)

                                    cTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAAt                                                        >  2:2583637/1‑91 (MQ=255)

                                      ataataAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAAttt                                                      >  1:399742/1‑91 (MQ=255)

                                       taataaACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAAtttt                                                     >  1:1859200/1‑91 (MQ=255)

                                        aataaACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTc                                                    >  2:1361875/1‑91 (MQ=255)

                                         ataaACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCg                                                   <  1:579572/91‑1 (MQ=255)

                                           aaaCTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGAt                                                 >  1:4264925/1‑91 (MQ=255)

                                             aCTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATAc                                               >  2:6048/1‑91 (MQ=255)

                                              cTTAATATAACAAAAACCCCAACTACTGGTAATAGCCGGGGTTTGATAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACt                                              >  2:5451027/1‑91 (MQ=255)

                                                 aaTATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGt                                           >  2:3125787/1‑91 (MQ=255)

                                                  atatAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGta                                          >  1:5208145/1‑91 (MQ=255)

                                                  atatAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGta                                          >  2:1287770/1‑91 (MQ=255)

                                                   tataACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtat                                         >  2:2191585/1‑91 (MQ=255)

                                                   tataACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtat                                         >  2:2008599/1‑91 (MQ=255)

                                                   tataACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtat                                         <  2:1838722/91‑1 (MQ=255)

                                                    ataACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtatt                                        <  2:4038061/91‑1 (MQ=255)

                                                     taACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtatta                                       >  1:991264/1‑91 (MQ=255)

                                                     taACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtatta                                       <  2:663734/91‑1 (MQ=255)

                                                      aaCAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTATAAACTGTTTATTTATATAATTTTCGATACTTGtattat                                      <  2:3305173/91‑1 (MQ=255)

                                                      aaCAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtattat                                      >  2:2499730/1‑91 (MQ=255)

                                                      aaCAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtattat                                      >  2:5528528/1‑91 (MQ=255)

                                                       aCAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATtata                                     <  2:1721417/91‑1 (MQ=255)

                                                       aCAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATtata                                     <  2:4251418/91‑1 (MQ=255)

                                                       aCAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATtata                                     >  1:1663925/1‑91 (MQ=255)

                                                            AACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATg                                <  1:4813354‑M1/91‑1 (MQ=255)

                                                             ACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGa                               >  1:1931775‑M1/1‑91 (MQ=255)

                                                              CCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaa                              >  1:3194385‑M1/1‑91 (MQ=255)

                                                               CCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaat                             >  1:4670685‑M1/1‑91 (MQ=255)

                                                               CCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaat                             >  1:4562038‑M1/1‑91 (MQ=255)

                                                                CCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaata                            <  2:2113060‑M1/91‑1 (MQ=255)

                                                                CCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaata                            <  1:5408231‑M1/91‑1 (MQ=255)

                                                                CCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaata                            >  1:5599144‑M1/1‑91 (MQ=255)

                                                                 CAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaataa                           <  1:4121389‑M1/91‑1 (MQ=255)

                                                                 CAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaataa                           >  1:175729‑M1/1‑91 (MQ=255)

                                                                  aaCTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaataat                          >  1:2915647/1‑91 (MQ=255)

                                                                  aaCTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaataat                          <  2:1170737/91‑1 (MQ=255)

                                                                  aaCGACTGGTAATGGTCGGGGTTTGGTAATAAAACGTTTAGAATCTGTTTATTTATATAATTTTCGATGCTTGTATTATATAATGaataat                          <  1:2233808/91‑1 (MQ=255)

                                                                   actactGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAataata                         <  1:3281934/91‑1 (MQ=255)

                                                                   actactGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAataata                         <  2:2799031/91‑1 (MQ=255)

                                                                     tactGGTAATAGTCGGGGTTTGGTAATAAATCGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATc                       <  2:5587682/91‑1 (MQ=255)

                                                                     tactGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATc                       <  2:2410512/91‑1 (MQ=255)

                                                                       ctGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCtt                     <  2:872457/91‑1 (MQ=255)

                                                                       ctGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCtt                     >  1:1269578/1‑91 (MQ=255)

                                                                       ctGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCtt                     <  2:3213408/91‑1 (MQ=255)

                                                                         ggTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAg                   >  2:5263606/1‑91 (MQ=255)

                                                                         ggTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAg                   <  2:5111291/91‑1 (MQ=255)

                                                                         ggTAATAGTCGGGGTTTGGTAATAAAACGTTGAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAg                   >  1:5516243/1‑91 (MQ=255)

                                                                          gTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGt                  >  2:4829435/1‑91 (MQ=255)

                                                                           tAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTg                 <  1:374516/91‑1 (MQ=255)

                                                                             aTAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCa               <  2:2852593/91‑1 (MQ=255)

                                                                                gTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGc            <  1:2462903/91‑1 (MQ=255)

                                                                                 tCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCa           <  2:227078/91‑1 (MQ=255)

                                                                                 tCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCa           <  1:1384451/91‑1 (MQ=255)

                                                                                 tCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCa           <  2:1931446/91‑1 (MQ=255)

                                                                                  cGGGATTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCAc          <  1:3634668/91‑1 (MQ=255)

                                                                                   ggggtttGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCAcc         >  1:4921064‑M2/8‑91 (MQ=255)

                                                                                   ggggtttGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCAcc         >  2:3021395‑M2/8‑91 (MQ=255)

                                                                                   ggggtttGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCAcc         >  1:444906‑M2/8‑91 (MQ=255)

                                                                                   ggggtttGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATACCTTAGTGAAAGCAcc         >  2:4358150‑M2/8‑91 (MQ=255)

                                                                                     ggtttGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTa       <  2:5038382‑M2/86‑1 (MQ=255)

                                                                                      gtttGGTAATAAAACGTTTCGAAACTGTTTATTTATATAATTTTCGATACTTGGATTATATAATGAATAATATCTTAGTGCAAGCACCTaa      <  1:4329175‑M2/87‑1 (MQ=255)

                                                                                      gtttGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTaa      <  1:2671090‑M2/87‑1 (MQ=255)

                                                                                      gtttGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTaa      <  2:4653187‑M2/87‑1 (MQ=255)

                                                                                      gtttGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTaa      <  1:2352951‑M2/87‑1 (MQ=255)

                                                                                       tttGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTaaa     >  2:3941904‑M2/4‑91 (MQ=255)

                                                                                       tttGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTaaa     <  1:3843893‑M2/88‑1 (MQ=255)

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTANAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCA  >  CP000731/1‑155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.