New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_012417 | 987 = | 3578 (0.350) | 192 (0.020) | 37/232 | NT | 5.8% | pseudogene (708/709 nt) | USA300HOU_RS14890 | replication protein |
? | NC_012417 | 1013 = | 2958 (0.320) | coding (182/192 nt) | USA300HOU_RS15665 | hypothetical protein |
Only 100 of 1439 total aligned reads displayed.
TCATACAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012417/1137‑987 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAATA > NC_012417/1013‑1152 TCATACAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACA > 1:256652/1‑141 TCATACAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACA > 1:1622001/1‑141 TCATACAAAGCTCTACTGTCTTATTTTTGTGTCACAATATATTGCTTTTTTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAATAAATCAACAAAAAAGACATTAGTCAACA < 3:559165/141‑1 ttTACAAAGCGGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAGAGGCAGTAGTCAACAC < 2:796694/139‑1 aATACAAAGCTGTAATATCTTATTTTTGTAACACAATATATTGCTTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAAAAAACAAAAAAGACATTAGTCAACAC < 2:1053531/140‑1 CATACAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACAC < 1:445637/141‑1 CATACAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACAC < 1:579758/141‑1 CATACAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACAC > 1:1510739/1‑141 CATACAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATAAACAAAAAAGACATTAGTCAACAC < 2:66958/141‑1 CATACAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTAATTATAAAAAAAAAATCAACAAAAAAGACATTAGTCAACAC < 2:363895/141‑1 aaaaAAAGCTATAAAGTATTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGACACAAAAATAAGACAGTACTTTTTTATAAAAAAAAAAAAAAAAAGACATTAGTCAACACT < 2:1154150/137‑1 ATACAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACT < 3:97931/141‑1 ATACAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACT < 1:1477376/141‑1 ACAAATCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAA < 1:672136/141‑1 ACAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAA > 1:768011/1‑141 ACAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAA < 1:210077/141‑1 ACAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAA < 2:613393/141‑1 ACAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAA < 3:72110/141‑1 ACAAAGATGTAGTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATATAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAA < 2:1499810/141‑1 CAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAAT > 2:750382/1‑141 CAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAAT < 2:1108556/141‑1 CAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAAT < 1:833419/141‑1 AAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATG < 1:48554/141‑1 AAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATG > 1:1595805/1‑141 AAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATG < 1:945040/141‑1 AAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATG > 1:1008917/1‑141 aacagGTACTGACTTATTTTTGAAACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAAACAACAAAAAAGACATTAGTCAACACTAATGT < 2:262766/136‑1 AAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGT > 4:693105/1‑141 AAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGT > 3:125635/1‑141 AAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTAAATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGT > 3:512254/1‑141 AGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTC > 3:348623/1‑141 AGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTC > 3:324494/1‑141 AGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTC > 1:286040/1‑141 AGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTC > 2:14342/1‑141 GCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTGTTGACTAATGTCT > 1:321861/1‑141 GCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCT > 1:1051216/1‑141 GCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCT > 1:909812/1‑141 CTGTACTGTCTTATTTTTGTTTTTTTATATATTGCGTTTGTCTTATTTTTGTGACACTACATATAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTT > 2:1359/1‑141 CTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTT > 1:87367/1‑141 CTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTT > 2:447042/1‑141 CTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTT > 2:529404/1‑132 CACTATATATTGCGTTTGACTAATTTTTGTGACAATACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAA < 2:869510/141‑1 TCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACAC > 3:439662/1‑60 TCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACAC < 4:439662/60‑1 AAGACATTAGTCAACACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAG > 1:1121718/1‑141 AAGACATTAGTCAACACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAG > 2:463798/1‑141 AAGACATTAGTCAACACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAG > 1:143017/1‑141 GACATTAGTCAACACTAATTTCTTTGTAGTTGATTGTTTATAAAAAATTACTGTCGGATGTTTGTGACAGATGCGGGATGTAGGGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCT > 1:242366/1‑141 ACATTAGTCAACACTAATGTCTTTTTTGTTGATTTTTTTTTTTAATTTACTATCTTATTTTTTTGACAATTGCTGTATGTAGTGTCACAAAAATAAGACAAACGCCATATATTGTGTAACAAAAATAAGACAGTACAtaaa > 2:57909/1‑137 CATTAGTCAACACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACACAAATAAGACAGTACAGCTTT > 4:23326/1‑141 ATTAGTCAACACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTt > 2:1272525/1‑140 ATTAGTCAACACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTG > 1:177921/1‑141 TTAGTCAACACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGT > 4:356029/1‑141 TTAGTCAACACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAATACGGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGT > 2:1403109/1‑141 TAGTCAACACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTA > 1:1560550/1‑141 TAGTCAACACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTA > 1:799267/1‑141 GTCAACACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAG > 4:165173/1‑132 GTCAACACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCATATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATG > 2:1471329/1‑141 tttggCTAATGTCTTTTTTGTTGAATTATTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGAT < 2:1538657/136‑1 CACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATC > 3:663679/1‑141 ACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCA > 1:1298166/1‑141 ccAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCAC > 3:481709/3‑141 CTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCAC > 1:364581/1‑141 CTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCAC < 3:152785/141‑1 CTAATGTCTTTTTTGTTGATGTGTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCAC < 1:1261689/141‑1 TAATGTCTTTTTTGTTGATTTTTTATAAAGAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGCCAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACT < 4:397794/141‑1 TAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACT < 1:404614/141‑1 TAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACT < 4:292525/141‑1 TAATGTCTTTTTTGTTGATTTATTATAAAAAAGTACTGTCATATTTTTGTGAAAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACT < 2:972589/141‑1 AATGTCTTTTTTTTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAATACAGTACAGCTTTGTATGATATCACTT > 4:505879/1‑141 AATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTT < 2:1580564/141‑1 AATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACA > 2:844922/1‑74 ATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTT > 2:703903/1‑141 ATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTT < 2:1028499/141‑1 ATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTT < 1:529017/141‑1 ATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTT < 3:61716/141‑1 ATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATAATATAACTTT > 2:1319139/1‑141 ATGTCTTTTTTGCTGTCAGCTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTT < 3:391504/141‑1 TGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTA < 1:1222333/141‑1 TGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTA < 2:1209607/141‑1 GTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAA < 4:636474/141‑1 GTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAA > 1:1391056/1‑141 GTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAA < 1:981318/141‑1 GTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAA > 2:170711/1‑141 GTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAA > 2:213166/1‑141 GTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAA < 2:396265/141‑1 GTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCGGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAA > 4:601943/1‑141 TCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAA < 1:714216/141‑1 TCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAA < 1:623355/141‑1 CTTTTTTTTTTTTTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACTAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAA > 2:314660/1‑141 CTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAATACAGTAAAGCTTTGTATGATATCANTTTAAAA > 2:1238921/1‑141 CTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAA > 3:266661/1‑141 CTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAA > 4:561605/1‑141 CTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAA > 3:187267/1‑141 CTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAA > 1:118258/1‑141 CTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAA > 3:2198/1‑141 TTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAAT > 1:1090038/1‑141 TTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAAT < 1:1350258/141‑1 TTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAATA < 2:933469/141‑1 TTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTATCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAATA < 2:1630338/141‑1 TCATACAAAGCTGTACTGTCTTATTTTTGTGACACAATATATTGCGTTTGTCTTATTTTTGTGACACTACATACAGCATTTGTCACAAAAATAAGACAGTACTTTTTTATAAAAAATCAACAAAAAAGACATTAGTCAACACTAATGTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012417/1137‑987 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTTTGTATGATATCACTTTAAAATA > NC_012417/1013‑1152 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |