New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | USA300TCH1516_ALE | 2716742 = | 154 (0.840) | 12 (0.070) | 11/232 | NT | 7.2% | intergenic (+50/+100) | USA300HOU_RS13965/USA300HOU_RS13970 | hypothetical protein/hypothetical protein |
? | USA300TCH1516_ALE | 2716816 = | 168 (1.010) | intergenic (+124/+26) | USA300HOU_RS13965/USA300HOU_RS13970 | hypothetical protein/hypothetical protein |
GCAATGTTCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/2716892‑2716742 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtatgggctttTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTTCACTT > USA300TCH1516_ALE/2716816‑2716954 GCAATGTTCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAG > 2:490243/1‑141 aAATGTTCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGT < 1:349790/140‑1 CAATGTTCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGT < 1:251069/141‑1 CAATGTTCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGT < 2:1032933/141‑1 CAATGTTCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGT < 1:687290/141‑1 TGTTCAACGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATG > 3:561098/1‑141 TGTTCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATG > 3:685327/1‑141 TGTTCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATG > 4:453025/1‑141 GTTCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGG < 1:1383058/141‑1 GTTCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGG > 2:914996/1‑141 GTTCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGG < 2:1551468/141‑1 TTCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGG > 1:1297033/1‑141 TTCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGG > 1:484892/1‑141 TCAAAGATCTTGATGGACACCATTTTACTTTTTTGGTCTGCTAAAATGAAATACCCAAAAGAATAAATAAAAAGCCCATACAGAGATGCAGCGTAATGTGCACCATGGTGCGACACACTAGTGTCTTCAATCAGTATGGGC > 2:1630255/1‑141 TCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGC < 1:318708/141‑1 TCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGC < 3:182020/141‑1 TCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGC < 3:162271/141‑1 CAAAGATCTTGATGGACACCATTTTAATTTTTTTTTTTTTTTTAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCT > 2:1591310/1‑141 CAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCT < 3:229629/141‑1 CAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCT > 2:1419511/1‑141 CAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCT > 2:44665/1‑141 CAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCT < 2:244243/141‑1 CAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCAGACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCT < 2:1390377/141‑1 AAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTT < 2:356801/141‑1 AAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTT < 2:95421/141‑1 AAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTT < 4:306980/141‑1 AAAGATCTTGAGGGATAGCATTGTGATTTTTAGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGGAATGTGCACCATGGTGCGACACATTAGTGTCTTCAAGCAGTATGGCCTT < 2:989579/141‑1 AAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTT > 2:970327/1‑141 AAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTT < 1:1358262/141‑1 AAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTT > 1:1329421/1‑141 AAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTT < 2:441965/141‑1 AAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGAGCATACAGAGATGAAGCGTAATTTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTT > 1:744704/1‑141 TAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTTTTAGTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGAT > 1:1159425/1‑141 AAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTT > 1:1463664/1‑141 CCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAA > 2:756027/1‑141 CCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAAC > 2:1500256/1‑141 TACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATT > 1:425930/1‑141 TACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATC > 3:678297/1‑125 TACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATC < 4:678297/125‑1 GCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGC‑‑TTTGTTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAA < 2:1567323/137‑1 GCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGC‑‑TTTGTTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAA > 1:1567323/1‑137 GGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTG < 1:1500256/141‑1 GGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTG > 1:658873/1‑141 GCGACACATTAGTGTCNTCAATCAGTATGNGCTTTTTATTTATGCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTT > 1:954916/1‑141 AATCAGTATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACC < 2:1062524/141‑1 TATGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTC < 2:314053/141‑1 TGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTT > 1:27290/1‑141 TGGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAAATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTT < 2:1354138/141‑1 GGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTT < 1:1316354/141‑1 GGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTT < 2:708073/141‑1 GGGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTT < 3:78279/141‑1 GGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTTC > 1:1247681/1‑141 GGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTTC > 4:186732/1‑141 GGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTTC < 1:1461641/141‑1 GGCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTTC > 2:1292163/1‑141 GCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTTCA > 1:688093/1‑141 GCTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTTCA > 1:688132/1‑141 CTTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTTCAC < 2:275623/141‑1 TTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCATCCGCTTCTTTCACT > 2:1166514/1‑141 TTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTTCACT > 3:410648/1‑141 TTTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTTCACT > 1:1447109/1‑141 TTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTTCACTT < 4:379834/141‑1 TTTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTTCACTT < 2:537754/141‑1 GCAATGTTCAAAGATCTTGATGGACACCATTTTAATTTTTTGGTCTGCTAAAATGAAATTCTCAAAAGAATAAATAAAAAGCCCATACAGAGATGAAGCGTAATGTGCACCATGGTGCGACACATTAGTGTCTTCAATCAGTATGGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/2716892‑2716742 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtatgggctttTTATTTATTCTTTTGAGAATTTCATTTTAGCAGACCAAAAAATTAAAATGGTGTCCATCAAGATCTTTGAACATTGCTCCATAAAACCCTTGGCTTACTGTTGGTTCTTGAACGACTGTGCCACCCGCTTCTTTCACTT > USA300TCH1516_ALE/2716816‑2716954 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |