New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_012417 | 9 = | 270 (0.030) | 9 (0.000) +AAAAAAAAAA |
6/234 | NT | 6.7% | intergenic (–/‑271) | –/USA300HOU_RS14890 | –/replication protein |
? | NC_012417 | = 3123 | 0 (0.000) | intergenic (‑449/–) | USA300HOU_RS14900/– | hypothetical protein/– |
Only 100 of 10782 total aligned reads displayed.
CTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012417/2983‑3125 | cTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCttttt > 1:155208/1‑141 (MQ=255) gATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATa < 1:1081714‑M2/141‑2 (MQ=255) gATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATa < 2:144708‑M2/141‑2 (MQ=255) aTTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATat > 3:23970‑M2/1‑139 (MQ=255) ttttATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatg < 3:622833‑M2/141‑4 (MQ=255) tttATATATATAGCTGTAACTGTTGCTATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATACAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgc > 2:830785‑M2/1‑137 (MQ=255) atatatataGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaat < 4:563830‑M2/141‑8 (MQ=255) atatatataGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaat < 2:1533838‑M2/141‑8 (MQ=255) tatatataGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTTCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaata < 4:359768‑M2/141‑9 (MQ=255) tatatataGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaata < 2:1360354‑M2/141‑9 (MQ=255) tatatataGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaata < 1:268258‑M2/141‑9 (MQ=255) tatatataGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaata < 3:493000‑M2/141‑9 (MQ=255) tatatataGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaata > 2:157705‑M2/1‑133 (MQ=255) atataGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataa < 4:651121‑M2/141‑12 (MQ=255) aGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatact > 2:742412‑M2/1‑126 (MQ=255) gCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatacta > 4:223939‑M2/1‑125 (MQ=255) tAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactag > 2:43207‑M2/1‑121 (MQ=255) aCTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaa < 1:389263‑M2/141‑23 (MQ=255) aCTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaa < 1:927863‑M2/141‑23 (MQ=255) tGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACACCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagt < 1:1633409‑M2/141‑25 (MQ=255) tGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTAAAAAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagt > 4:265110‑M2/1‑117 (MQ=255) ttGATCTTACAGTGTCTAAACGTGTTTTTGTACGTGAAAAGAATAACTGACAATAAATAACCCAATTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtat > 4:60911‑M2/1‑115 (MQ=255) ttGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtat > 2:213554‑M2/1‑115 (MQ=255) tGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtata < 2:102086‑M2/141‑28 (MQ=255) gATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataa > 2:1281232‑M2/1‑113 (MQ=255) gATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatacaatataatactactagaagtataa > 1:1041659‑M2/1‑113 (MQ=255) tatTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataacc > 1:305328‑M2/1‑111 (MQ=255) tatTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataacc > 2:1231385‑M2/1‑111 (MQ=255) atTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccg > 3:109170‑M2/1‑110 (MQ=255) atTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccg > 1:971870‑M2/1‑110 (MQ=255) ttACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccga > 1:1519058‑M2/1‑109 (MQ=255) tACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaa < 2:337457‑M2/141‑34 (MQ=255) tACAGTGTTTAAACGTGTTTTTGTGAGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaa < 4:31367‑M2/141‑34 (MQ=255) aGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaat < 4:692764‑M2/141‑37 (MQ=255) gtgtTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatc < 1:1430164‑M2/141‑38 (MQ=255) tgtTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatca > 2:921832‑M2/1‑103 (MQ=255) ttAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaaga < 2:1190605‑M2/141‑42 (MQ=255) aaCGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataa > 4:138959‑M2/1‑97 (MQ=255) gtTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaa < 1:129296‑M2/141‑50 (MQ=255) ttttGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacg > 2:170610‑M2/1‑90 (MQ=255) ttttGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacg > 2:649551‑M2/1‑90 (MQ=255) ttGTCCGTGAAAAGAAAATTTGAAAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTATTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataacacgtt > 2:1400902‑M2/1‑88 (MQ=255) cgtgcGTGAAAGGAAAATTTGACCATAAAAAACCCCAGTTATATTATTAAGGTGTAGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagacgtataaccgaaaatcaagataataaaacgtta < 2:115168‑M2/140‑55 (MQ=255) gtgCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaa > 1:470119‑M2/1‑86 (MQ=255) gtgCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaa > 1:888921‑M2/1‑86 (MQ=255) tgCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaa < 3:702592‑M2/141‑57 (MQ=255) tGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagat < 1:11203‑M2/141‑61 (MQ=255) tttttgaaaatTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTTTtttttttttaatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatt < 4:477846‑M2/136‑62 (MQ=255) ggAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgac > 1:774396‑M2/1‑76 (MQ=255) aaTTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCttttt > 1:674309/1‑70 (MQ=255) aaTTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaa > 3:295412‑M2/1‑72 (MQ=255) aTTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaa < 1:1472668‑M2/141‑71 (MQ=255) tGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacggtaaaagataagacgaaaagag < 1:351156‑M2/141‑74 (MQ=255) gACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgg > 2:96190‑M2/1‑67 (MQ=255) aCAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtggg < 1:186077‑M2/141‑76 (MQ=255) aCAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtggg < 1:1251477‑M2/141‑76 (MQ=255) aCAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtggg < 2:787364‑M2/141‑76 (MQ=255) aaTAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaa < 1:1341892‑M2/141‑78 (MQ=255) tAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaac > 3:455419‑M2/1‑62 (MQ=255) aaaaCCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaac > 2:47877‑M2/1‑59 (MQ=255) aaCCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaggtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgc < 3:419763‑M2/141‑85 (MQ=255) aaCCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgc > 3:57888‑M2/1‑57 (MQ=255) ccccAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgccc < 2:106222‑M2/141‑87 (MQ=255) ccccAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaaccaagataataaaaagttaaaagatatgacaacaagtgggaaacaacgcaa < 1:72764‑M2/141‑87 (MQ=255) cccAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagctaataaaacgttaaaagatatgacgaaaagtgggaaacaacgccca > 4:185895‑M2/1‑54 (MQ=255) cccAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgccca > 2:694584‑M2/1‑54 (MQ=255) cccAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgccca > 3:157215‑M2/1‑54 (MQ=255) ccAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccat > 2:1493676‑M2/1‑53 (MQ=255) ccAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccat < 1:593103‑M2/141‑89 (MQ=255) ccAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccat > 2:601770‑M2/1‑53 (MQ=255) ttATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTATATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggag > 4:397130‑M2/1‑49 (MQ=255) ttattaAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaa < 1:1163842‑M2/141‑98 (MQ=255) tattaAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaa > 1:549806‑M2/1‑43 (MQ=255) tattaAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaa < 1:224252‑M2/141‑99 (MQ=255) taAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaa > 4:102424‑M2/1‑40 (MQ=255) cGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaattaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagata < 1:1209803‑M2/141‑110 (MQ=255) cGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagata > 4:438087‑M2/1‑32 (MQ=255) cGAATCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaac < 2:296304‑M2/111‑80 (MQ=255) aaTCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataat < 3:198848‑M2/141‑112 (MQ=255) aTCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagagaagaaaatagataatg < 1:1000125‑M2/141‑113 (MQ=255) aTCTTAAATAATACTGCGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatg < 2:252612‑M2/141‑113 (MQ=255) tCTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgt > 3:666614‑M2/1‑28 (MQ=255) cTTAAATAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgta < 2:521435‑M2/141‑115 (MQ=255) aaaTAATACTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagc > 3:537663‑M2/1‑24 (MQ=255) aaaTAATACTGGGGGCCATTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagc > 1:510913‑M2/1‑24 (MQ=255) ataataCTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagcaaatagataatgtaagcta < 2:1325759‑M2/141‑120 (MQ=255) taataCTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctat > 1:432990‑M2/1‑21 (MQ=255) ataCTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatgc < 2:566469‑M2/141‑123 (MQ=255) taCTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatgca < 1:1588685‑M2/141‑124 (MQ=255) aCTGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatgcag < 3:333891‑M2/141‑125 (MQ=255) tGGGGGTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatgcagat > 1:632268‑M2/1‑15 (MQ=255) gggggTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatgcagata > 1:1382530‑M2/1‑14 (MQ=255) ggggTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatgcagatat > 2:1106375‑M2/1‑13 (MQ=255) gggTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatgcagatata > 2:1620538‑M2/1‑12 (MQ=255) ggTCTTTTTATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatgcagatatac > 2:882614‑M2/1‑11 (MQ=255) tttttATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatgcagatatactaga < 1:853898‑M2/141‑135 (MQ=255) ttttATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatgcagatatactagaa < 1:815494‑M2/141‑136 (MQ=255) ttATatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatgcagatatactagaaat < 4:517359‑M2/141‑138 (MQ=255) tatatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatgcagatatactagaaatt > 3:382471‑M2/1‑3 (MQ=255) tatatgcaatataatactactagaagtataaccgaaaatcaagataataaaacgttaaaagatatgacgaaaagtgggaaacaacgcccatggagagaaaagaaaatagataatgtaagctatgcagatatacaagaaaaa > 2:381978‑M2/1‑3 (MQ=255) | CTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTTGTGCGTGAAAGGAAAATTTGACAATAAAAAACCCCAGTTATATTATTAAGGTGTCGAATCTTAAATAATACTGGGGGTCTTTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012417/2983‑3125 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |