BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	2256396 =	176 (0.960)	15 (0.090)	11/226	NT	9.6%	intergenic (+49/+72)	deoD1/dps	Purine nucleoside phosphorylase DeoD‑type 1/General stress protein 20U
*	?	USA300TCH1516_ALE	2256443 =	125 (0.770)	15 (0.090)	11/226	NT	9.6%	intergenic (+96/+25)	deoD1/dps	Purine nucleoside phosphorylase DeoD‑type 1/General stress protein 20U

Only 100 of 192 total aligned reads displayed.

TCATTTACACAAATGATGGAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTCGATTGCGTTTT  >  USA300TCH1516_ALE/2256303‑2256583

 cATTTACACAAATGATGGAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTtttat                                                                                                                                             >  2:941625/1‑141 (MQ=255)

     tACACAAATGATGGAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTttatttat                                                                                                                                         >  3:336809/1‑141 (MQ=255)

     tACACAAATGATGGAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTttatttat                                                                                                                                         >  2:89460/1‑141 (MQ=255)

       tgtaaaTGATGGAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTatat                                                                                                                                       >  2:1593418/4‑141 (MQ=255)

        acaAATGATGGAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTAtatt                                                                                                                                      <  1:674269/141‑1 (MQ=255)

        acaAATGATGGAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTAtatt                                                                                                                                      <  3:653890/141‑1 (MQ=255)

          aaaTGATGGAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTAtattat                                                                                                                                    <  3:362153/141‑1 (MQ=255)

          aaaTGATGGAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTAtattat                                                                                                                                    <  2:1172849/141‑1 (MQ=255)

            atgatgGAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATAttatta                                                                                                                                  <  3:608086/141‑1 (MQ=255)

            atgatgGAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATAttatta                                                                                                                                  >  2:1635500/1‑141 (MQ=255)

             tgatgGAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTAc                                                                                                                                 <  2:1629796/141‑1 (MQ=255)

               atgGAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACtt                                                                                                                               <  2:633635/141‑1 (MQ=255)

                tgGAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTTGCTTTTATTTATATTattaatta                                                                                                                              >  4:58348/1‑141 (MQ=255)

                 ggAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTAt                                                                                                                             >  4:233069/1‑141 (MQ=255)

                 ggAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTAt                                                                                                                             <  4:104086/141‑1 (MQ=255)

                 ggAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTAt                                                                                                                             >  2:217052/1‑141 (MQ=255)

                  gAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATc                                                                                                                            <  2:1272084/141‑1 (MQ=255)

                  gAAATCGCTTGAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATc                                                                                                                            <  1:750670/141‑1 (MQ=255)

                   aaaTCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCt                                                                                                                           >  4:603813/1‑141 (MQ=255)

                   aaaTCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCt                                                                                                                           <  3:104209/141‑1 (MQ=255)

                    aaTCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAATCTCAAACAGCCAACTCTTTCTGTGCGTATCCCCATTTATGTGTTGGCTTTTATTTTTATTTTTACTTATCTg                                                                                                                          <  2:570409/141‑1 (MQ=255)

                        gCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAATCTCAAAAAGCCAGCACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGa                                                                                                                      >  1:539335/1‑141 (MQ=255)

                        gCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGa                                                                                                                      >  2:1484933/1‑141 (MQ=255)

                           ttAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTa                                                                                                                   <  4:484762/141‑1 (MQ=255)

                              gAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCt                                                                                                                <  1:320006/141‑1 (MQ=255)

                               aaaTCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTTGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCtt                                                                                                               <  2:1059858/141‑1 (MQ=255)

                                   cGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTtaagt                                                                                                           <  2:807370/141‑1 (MQ=255)

                                    gCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTtaagta                                                                                                          <  1:579008/141‑1 (MQ=255)

                                           aaCTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTCTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTa                                                                                                   >  2:665478/1‑141 (MQ=255)

                                             cTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTaaa                                                                                                 <  3:273197/141‑1 (MQ=255)

                                              ttATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAAc                                                                                                <  1:1067501/141‑1 (MQ=255)

                                                 tttAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATc                                                                                             <  2:1109014/141‑1 (MQ=255)

                                                 tatAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATc                                                                                             <  4:658746/139‑1 (MQ=255)

                                                   tAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTCGTTTAGCGGAAGTAAGATTTAAACATCCa                                                                                           <  2:836793/141‑1 (MQ=255)

                                                       ttGACTTTAATTGCTCTTTAACGGGGCGATTAAACTCAAATGGCCAACACATTCTGCTGGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACAtaattgga                                                                                       <  3:496565/141‑8 (MQ=255)

                                                        tGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTAt                                                                                      <  2:1229192/141‑1 (MQ=255)

                                                         gACTTTAATTGCTCTTTAATAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATg                                                                                     <  1:418261/141‑1 (MQ=255)

                                                         gACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATg                                                                                     <  1:962193/141‑1 (MQ=255)

                                                         gACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATg                                                                                     >  1:1290016/1‑141 (MQ=255)

                                                         gACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATg                                                                                     <  4:505254/141‑1 (MQ=255)

                                                             ttAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTa                                                                                 >  2:1132631/1‑141 (MQ=255)

                                                               gctaatctacagataagtaataatataaatAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTGATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATc                                                                               >  1:887847‑M1/31‑141 (MQ=255)

                                                               aaTTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATc                                                                               >  2:223383/1‑141 (MQ=255)

                                                                 ttGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTa                                                                             <  3:603813/141‑1 (MQ=255)

                                                                 ttGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTa                                                                             <  1:499707/141‑1 (MQ=255)

                                                                   gCTCTTTAACAATGTGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACt                                                                           >  1:231929/1‑141 (MQ=255)

                                                                     tctTTAACAATGCGATTAATCTCAAGAACCCATTACATTCTCAGCTAATGCCCATTTATGTTTTGGCTTTGATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGa                                                                         <  3:418211/141‑1 (MQ=255)

                                                                     tctTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGa                                                                         >  2:47497/1‑141 (MQ=255)

                                                                     tctTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGa                                                                         >  1:979674/1‑141 (MQ=255)

                                                                       tttAACAATGCGATTAAGCTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATg                                                                       <  4:701323/141‑1 (MQ=255)

                                                                       tttAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATg                                                                       <  2:320946/141‑1 (MQ=255)

                                                                       tttAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATg                                                                       <  2:1089922/141‑1 (MQ=255)

                                                                          aaCAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGttt                                                                    >  1:1400056/1‑141 (MQ=255)

                                                                             aaTGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTg                                                                                                                          >  2:24654/1‑84 (MQ=255)

                                                                              aTGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCAt                                                                >  4:550868/1‑141 (MQ=255)

                                                                                gCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATAc                                                              >  1:1527486/1‑141 (MQ=255)

                                                                                 cGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATAcc                                                             <  1:956262/141‑1 (MQ=255)

                                                                                 aataatataaataaaagccaacacataaatggggatacgcccagaatgtgttggcttttATTTATattatt                                                                                                                                   <  4:569918‑M2/12‑1 (MQ=255)

                                                                                 aataatataaatAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATattatt                                                                                                                                   >  3:569918‑M1/13‑71 (MQ=255)

                                                                                  gATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCt                                                            >  2:1545369/1‑141 (MQ=255)

                                                                                      aaaCTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATaa                                                        >  1:353304/1‑141 (MQ=255)

                                                                                       aaCTCAAAAAGCCAACCCAGTCTTGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATaaa                                                       <  1:1261801/141‑1 (MQ=255)

                                                                                       aaCTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATaaa                                                       >  2:1621906/1‑141 (MQ=255)

                                                                                         cTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACa                                                     <  3:233069/141‑1 (MQ=255)

                                                                                           cAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATa                                                               >  2:917030/1‑129 (MQ=255)

                                                                                           cAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATaaagacg                                                   >  4:529929/1‑137 (MQ=255)

                                                                                           cAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACata                                                   >  1:1174025/1‑141 (MQ=255)

                                                                                             aaaagccaacacataaatggggatacgcccagaatgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATAtc                                                 >  1:694504‑M2/48‑141 (MQ=255)

                                                                                              AAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATAtct                                                <  1:911982‑M1/141‑1 (MQ=255)

                                                                                                   CAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGa                                           >  1:89460‑M1/1‑141 (MQ=255)

                                                                                                   CAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGa                                           <  1:1629597‑M1/141‑1 (MQ=255)

                                                                                                   CAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGa                                           >  1:635183‑M1/1‑141 (MQ=255)

                                                                                                     ACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATa                                         >  2:1036215‑M1/1‑141 (MQ=255)

                                                                                                     ACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATa                                         >  1:614507‑M1/1‑141 (MQ=255)

                                                                                                       ACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATAca                                       >  1:253370‑M1/1‑141 (MQ=255)

                                                                                                       ACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATAca                                       >  1:821532‑M1/1‑141 (MQ=255)

                                                                                                       ACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATAca                                       >  2:285372‑M1/1‑141 (MQ=255)

                                                                                                        CATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATAcat                                      <  2:843822‑M1/141‑1 (MQ=255)

                                                                                                        CATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATAcat                                      <  3:549824‑M1/141‑1 (MQ=255)

                                                                                                          taaatggggatacgcccagaatgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATAcatca                                    >  3:284376‑M2/35‑141 (MQ=255)

                                                                                                           tCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATAcatcat                                   <  1:142937/141‑1 (MQ=255)

                                                                                                            aatggggatacgcccagaatgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACatcatc                                  >  2:534656‑M2/33‑141 (MQ=255)

                                                                                                             tGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCg                                 >  2:371280/1‑141 (MQ=255)

                                                                                                             atggggatacgcccagaatgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCg                                 >  1:261212‑M2/32‑141 (MQ=255)

                                                                                                             atggggatacgcccagaatgtgttggcttttATTTATAGTATTACTTATCTGTAGATTAGCTTAAGTAAGAGTTAAACATCCAATTATGTTTATCTACTGATGTTAGCATACCTATAAACATATCTTCTGATACATCATCg                                 >  4:132983‑M2/32‑141 (MQ=255)

                                                                                                              gggCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGc                                >  1:757582/1‑141 (MQ=255)

                                                                                                                  gatacgcccagaatgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGc                            >  1:513127‑M2/27‑141 (MQ=255)

                                                                                                                    aTCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCAt                          <  1:83207/141‑1 (MQ=255)

                                                                                                                      ccccATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTa                        <  3:88947/141‑1 (MQ=255)

                                                                                                                          aTTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAg                    >  3:167110/1‑141 (MQ=255)

                                                                                                                            ttATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCa                  <  1:1023882/141‑1 (MQ=255)

                                                                                                                              atgtgttggcttttATTTATATTATTACTTATCTTTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTGTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAAt                >  1:998505‑M2/15‑141 (MQ=255)

                                                                                                                              atgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAAt                >  2:1346616‑M2/15‑141 (MQ=255)

                                                                                                                               tgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAAtt               >  2:819156‑M2/14‑141 (MQ=255)

                                                                                                                                gtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATAca                                       <  2:1295263‑M2/104‑1 (MQ=255)

                                                                                                                                   ttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTCGa           >  4:32298‑M2/10‑141 (MQ=255)

                                                                                                                                   ttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTCGa           <  3:679872‑M2/132‑1 (MQ=255)

                                                                                                                                            atttatATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTCGATTGCGtttt  >  1:1467390/1‑141 (MQ=255)

                                                                                                                                            atttatATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTCGATTGCGtttt  <  2:1454706/141‑1 (MQ=255)

                                                                                                                                            atttatATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTCGATTGCGtttt  >  1:1132790/1‑141 (MQ=255)

TCATTTACACAAATGATGGAAATCGCTTTAGAAATCGCAGAGTAACTTATTTAAATTGACTTTAATTGCTCTTTAACAATGCGATTAAACTCAAAAAGCCAACACATTCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTCGATTGCGTTTT  >  USA300TCH1516_ALE/2256303‑2256583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.