| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,078,152 | A→T | 5.1% | Q510L (CAG→CTG) | purL → | Phosphoribosylformylglycinamidine synthase subunit PurL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,078,152 | 0 | A | T | 5.1% | 607.5 / 17.7 | 176 | Q510L (CAG→CTG) | purL | Phosphoribosylformylglycinamidine synthase subunit PurL |
| Reads supporting (aligned to +/- strand): ref base A (92/75); new base T (5/4); total (97/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.47e-01 | |||||||||||
Only 100 of 181 total aligned reads displayed.
TGTATATAACAATCCATATGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAGTTGTTGGAATGGTAGGTTTGA > USA300TCH1516_ALE/1078012‑1078292 | tGTATATAACAATCCATATGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACa < 1:420862/141‑1 (MQ=255)tGTATATAACAATCCATATGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACa < 1:1206256/141‑1 (MQ=255) ataACAATCCATATGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATTACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGa < 1:867440/141‑1 (MQ=255) ataACAATCCATATGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGa > 1:454398/1‑141 (MQ=255) aaCAATCCATATGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATa < 2:1578515/141‑1 (MQ=255) cAATCCATATGAAGGAGGTACAATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGa < 1:14627/141‑1 (MQ=255) aaTCCATATGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGAt > 2:1225678/1‑141 (MQ=255) aTCCATATGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGAtt < 1:1619151/141‑1 (MQ=255) tCCATATGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTc > 1:134447/1‑141 (MQ=255) ccATATGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCa > 3:636073/1‑141 (MQ=255) cATGTGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGa > 4:440271/1‑132 (MQ=255) cATATGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGa < 3:440271/132‑1 (MQ=255) atatGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACTGTTGATAGAtttctt < 2:927912/141‑5 (MQ=255) atatGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAAc > 1:690520/1‑141 (MQ=255) tatGAAGGTTGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACg < 4:578934/141‑1 (MQ=255) tatGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACTGTTGATAGAtttcttt < 2:1145739/141‑6 (MQ=255) tatGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACg > 2:752498/1‑141 (MQ=255) atGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGa < 1:575205/141‑1 (MQ=255) atGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGa < 2:105914/141‑1 (MQ=255) atGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGa < 4:513686/141‑1 (MQ=255) tGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGaa < 1:221815/141‑1 (MQ=255) aGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAgg > 4:71180/1‑141 (MQ=255) ggTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGt < 2:1013269/141‑1 (MQ=255) gAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATgg < 1:1651453/141‑1 (MQ=255) aaaGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGc > 1:518453/1‑141 (MQ=255) aaGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGTGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCa < 2:1583556/141‑1 (MQ=255) aaGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGaa < 2:1328861/131‑1 (MQ=255) aaGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGaa > 1:1328861/1‑131 (MQ=255) gATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGa > 2:1609145/1‑141 (MQ=255) gtagtaGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCa > 3:387839/1‑141 (MQ=255) tagtagCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCAt > 1:603505/1‑141 (MQ=255) gtagCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGc > 3:89861/1‑141 (MQ=255) tagCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTTATAGATTCAACGAAAGGTATGGCAGAAGCATGCg < 1:731213/141‑1 (MQ=255) tagCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCg < 2:394350/141‑1 (MQ=255) agCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGa < 1:794450/141‑1 (MQ=255) agCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGa > 3:504224/1‑141 (MQ=255) gCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGAc < 2:648069/141‑1 (MQ=255) gCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGAc > 2:803972/1‑141 (MQ=255) gAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACAtt > 1:843435/1‑141 (MQ=255) aaGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTc < 2:522225/141‑1 (MQ=255) gCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCtt > 2:482685/1‑141 (MQ=255) tCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGac > 4:312616/1‑141 (MQ=255) tCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGac > 3:88049/1‑141 (MQ=255) gAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGacac > 1:1123832/1‑141 (MQ=255) aaTTTAATTGCCGTGGGTGCAACACCCTTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCa > 4:129074/1‑141 (MQ=255) ttgtAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCag < 1:560/138‑1 (MQ=255) aTTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCag > 2:1491397/1‑141 (MQ=255) tttAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCagt > 1:1009249/1‑141 (MQ=255) aaTTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCagtagt > 2:1124825/1‑141 (MQ=255) aaTTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCagtagt > 1:1041790/1‑141 (MQ=255) aaTTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCagtagt > 1:416494/1‑141 (MQ=255) aTTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGtt < 3:429791/141‑1 (MQ=255) tGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTc > 1:1438123/1‑141 (MQ=255) ccGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTg > 1:163948/1‑141 (MQ=255) ccGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTg > 1:266776/1‑141 (MQ=255) gTGGGTGAAACACCATTAGCAATGACAGATTGCTTAAATTATAGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGt < 1:895787/141‑1 (MQ=255) gTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATg > 1:1007548/1‑141 (MQ=255) tGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGACAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGt > 2:333610/1‑141 (MQ=255) aaCACCATTAGCAATGACAGATTGTTTAAATGATGGTTCTCCTGAAAAGACAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACAATCTTAAGACACCAGTAGCTTCTGGTAATGTATc > 2:1112570/1‑141 (MQ=255) acacCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCt < 1:1551613/141‑1 (MQ=255) acacCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCt > 1:1539809/1‑141 (MQ=255) ccATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTta > 2:932001/1‑141 (MQ=255) cAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATaacg > 1:949945/1‑141 (MQ=255) cAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACAATCTTAAGACACCAGTAGTTTCTGGTAATGTAACTTTATATaacg > 2:22595/1‑141 (MQ=255) gACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATaacgaaac > 2:319124/1‑141 (MQ=255) aTTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAg < 4:480505/78‑1 (MQ=255) aTTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAg > 3:480505/1‑78 (MQ=255) ttGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAgg < 1:404807/141‑1 (MQ=255) ttAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACt < 2:637064/141‑1 (MQ=255) ttAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACt > 2:1452296/1‑141 (MQ=255) ttAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACt < 2:1610329/141‑1 (MQ=255) aTTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTa < 4:460322/141‑1 (MQ=255) aTTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTa < 1:1218114/141‑1 (MQ=255) aTTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTa > 2:161108/1‑141 (MQ=255) tATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTAtt < 2:1415892/141‑1 (MQ=255) tGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTAtttt < 1:932001/141‑1 (MQ=255) gTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTcc < 1:106986/141‑1 (MQ=255) tctcCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGc < 3:707131/56‑1 (MQ=255) ctcCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCaa > 3:200834/1‑141 (MQ=255) ctcCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCaa > 1:828196/1‑141 (MQ=255) cTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGTTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAacac < 4:8078/141‑1 (MQ=255) cTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAacac < 3:77865/141‑1 (MQ=255) cTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAacac < 2:844494/141‑1 (MQ=255) cTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAacac < 2:1355354/141‑1 (MQ=255) cTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAacac < 4:387839/141‑1 (MQ=255) aaaaGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAg < 2:137728/141‑1 (MQ=255) aaagaaagAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAgt > 3:275722/1‑141 (MQ=255) gaaaTCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAGTTGTTGGa > 2:1621242/1‑141 (MQ=255) aaTCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAGTTGTTGGAAt < 3:147342/141‑1 (MQ=255) aTCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAAAGAAAGGTACTTCTATTTTCCCAACACCAGTTGTTGGAATg > 2:670031/1‑141 (MQ=255) tATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAGTTGTTGGAATGGTa > 4:14690/1‑141 (MQ=255) tCAACTGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAGTTGTTGGAATGGTAgg > 3:597680/1‑141 (MQ=255) tCAACTGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAGTTGTTGGAATGGTAgg > 4:375850/1‑141 (MQ=255) tCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAGTTGTTGGAATGGTAgg > 1:1411304/1‑141 (MQ=255) tCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAGATGTTGGAATGGTAgg > 2:44708/1‑141 (MQ=255) cAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAGTTGTTGGAATGGTAGGt < 2:842632/141‑1 (MQ=255) aaCAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAGTTGTTGGAATGGTAGGtt < 1:1281669/141‑1 (MQ=255) aaCAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAGTTGTTGGAATGGTAGGtt > 3:58330/1‑141 (MQ=255) aGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAGTTGTTGGAATGGTAGGTttgt > 4:212342/1‑140 (MQ=255) aGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAGTTGTTGGAATGGTAGGTttga > 1:59042/1‑141 (MQ=255) | TGTATATAACAATCCATATGAAGGTGGAAAGATGGTAGTAGCTGAAGCTTATCGAAATTTAATTGCCGTGGGTGCAACACCATTAGCAATGACAGATTGTTTAAATTATGGTTCTCCTGAAAAGAAAGAAATCTATCAACAGTTGATAGATTCAACGAAAGGTATGGCAGAAGCATGCGACATTCTTAAGACACCAGTAGTTTCTGGTAATGTATCTTTATATAACGAAACGAAAGGTACTTCTATTTTCCCAACACCAGTTGTTGGAATGGTAGGTTTGA > USA300TCH1516_ALE/1078012‑1078292 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |