Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ USA300TCH1516_ALE 1072623 1072628 6 3 [1] [1] 3 folD Bifunctional protein FolD protein

TGTAAGATTGTTACTGATGCATTTTTTTGAAGTAGTAACTTAGAAACTGGTTGTCCGACAATATGACTTCGTCCAATTACAACTGCATTTTTACCTTCTAAATCAATATCAGCATGTTTTAATATTTCCATGATGCCGAGCG  >  USA300TCH1516_ALE/1072628‑1072769
 |                                                                                                                                            
tGTAAGATTGTTACTGATGCATTTTTTTGAAGTAGTAACTTAGAAACTGGTTGTCCGACAATATGACTTCGTCCAATTACAACTGCATTTTTACCTTCTAAATCAATATCAGCATGTTTTAATATTTCCATGATGCCGAGc   <  2:11330/141‑1 (MQ=255)
 gTAAGATTGTTACTGATGCATTTTTTTGAAGTAGTAACTTAGAAACTGGTTGTCCGACAATATGACTTCGTCCAATTACAACTGCATTTTTACCTTCTAAATCAATATCAGCATGTTTTAATATTTCCATGATGCCGAGCg  <  1:8639/141‑1 (MQ=255)
 gTAAGATTGTTACTGATGCATTTTTTTGAAGTAGTAACTTAGAAACTGGTTGTCCGACAATATGACTTCGTCCAATTACAACTGCATTTTTACCTTCTAAATCAATATCAGCATGTTTTAATATTTCCATGATGCCGAGCg  <  2:85175/141‑1 (MQ=255)
 |                                                                                                                                            
TGTAAGATTGTTACTGATGCATTTTTTTGAAGTAGTAACTTAGAAACTGGTTGTCCGACAATATGACTTCGTCCAATTACAACTGCATTTTTACCTTCTAAATCAATATCAGCATGTTTTAATATTTCCATGATGCCGAGCG  >  USA300TCH1516_ALE/1072628‑1072769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: