Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1400136	1400194	59	2 [1]	[1] 2	[dinB1]	[dinB1]

ATAATAAGATTCAAGTAAGGGAGGAATAACAGTGTATAATTATCATTTATTAGAAGATAGGGATGTTCTATGTATTGACCAAAAAAGTTTTTTTGCGAGTGTTTCTTGTATTGAAAAGGGGCTAGATCCATTAGAAACAAAGCTAGCTGTTGTTGCAGATACTAAGCGTCAGGGTTCTGTAATATTGGCTG  >  USA300TCH1516_ALE/1400145‑1400335                                                   |                                                                                                                                             ataataAGATTCAAGTAAGGGAGGAATAACAGTGTATAATTATCATTTATTAGAAGATAGGGATGTTCTATGTATTGACCAAAAAAGTTTTTTTGCGAGTGTTTCTTGTATTGAAAAGGGGCTAGATCCATTAGAAACaaa                                                    >  1:50644/1‑141 (MQ=255)                                                   taGAAGATAGGGATGTTCTATGTATTGACCAAAAAAGTTTTTTTGCGAGTGTTTCTTGTATTGAAAAGGGGCTAGATCCATTAGAAACAAAGCTAGCTGTTGTTGCAGATACTAAGCGTCAGGGTTCTGTAATATTGGCTg  <  2:50644/141‑1 (MQ=255)                                                   |                                                                                                                                             ATAATAAGATTCAAGTAAGGGAGGAATAACAGTGTATAATTATCATTTATTAGAAGATAGGGATGTTCTATGTATTGACCAAAAAAGTTTTTTTGCGAGTGTTTCTTGTATTGAAAAGGGGCTAGATCCATTAGAAACAAAGCTAGCTGTTGTTGCAGATACTAAGCGTCAGGGTTCTGTAATATTGGCTG  >  USA300TCH1516_ALE/1400145‑1400335

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑