Predicted mutation
evidence seq id position mutation annotation gene description
RA USA300TCH1516_ALE 210,283 G→A R2225Q (CGG→CAG)  grsB → Gramicidin S synthase 2

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*USA300TCH1516_ALE210,2830GA100.0% 53.3 / NA 20R2225Q (CGG→CAG) grsBGramicidin S synthase 2
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (12/8);  total (12/8)

CAGAAGATGTGACATTTTCAGAAGCGGATGTCTATAAAGGGCAACTACTAACATCACCATATACACGGAGCAAATTTTATAGTGAATTAAAAGTATTAGAAGCTGTAAATAATGGCTTAGATGGTCGGATTGTACGTGTTGGTAATTTGACGAATCCTTACAATGGAAGATGGCATATGAGAAATATAAAGACTAACCGTTTTTCAATGGTAATGAATGATTTGTTACAACTGGATTGTATCGGGGTTAGCATGGC  >  USA300TCH1516_ALE/210157‑210412
                                                                                                                              |                                                                                                                                 
caGAAGATGTGACATTTTCAGAAGCGGATGTCTATAAAGGGCAACTACTAACATCACCATATACACGGAGCAAATTTTATAGTGAATTAAAAGTATTAGAAGCTGTAAATAATGGCTTAGATGGTCAGATTGTACGTGTTg                                                                                                                     <  1:97403/141‑1 (MQ=255)
aagaagaTGTGACATTTTCAGAAGCGGATGTCTATAAAGGGCAACTACTAACATCACCATATACACGGAGCAAATTTTATAGTGAATTAAAAGTATTAGAAGCTGTAAATAATGGCTTAGATGGTCAGATTGTACGTGTTg                                                                                                                     <  2:102676/140‑1 (MQ=255)
 agaagaTGTGACATTTTCAGAAGCGGATGTCTATAAAGGGCAACTACTAACATCACCATATACACGGAGCAAATTTTATAGTGAATTAAAAGTATTAGAAGCTGTAAATAATGGCTTAGATGGTCAGATTGTACGTGTTgg                                                                                                                    <  1:11494/141‑1 (MQ=255)
  gaagaTGTGACATTTTCAGAAGCGGATGTTTATACATGTCAACTACTAACATCACCATATACACGGAGCAAATTTTATAGTGAATTAAAAGTATTAGAAGCTGTAAATAATGGCTTAGATGGTCAGATTGTACGTGTTGGt                                                                                                                   <  1:250670/141‑1 (MQ=255)
     gaTGTGACATTTTCAGAAGCGGATGTCTATAAAGGGCAACTACTAACATCACCATATACACGGAGCAAATTTTATAGTGAATTAAAAGTATTAGAAGCTGTAAATAATGGCTTAGATGGTCAGATTGTACGTGTTGGTAAt                                                                                                                >  2:251338/1‑141 (MQ=255)
       tgtgACATTTTCAGAAGCGGATGTCTATAAAGGGCAACTACTAACATCACCATATACACGGAGCAAATTTTATAGTGAATTAAAAGTATTAGAAGCTGTAAATAATGGCTTAGATGGTCAGATTGTACGTGTTGGTAAttt                                                                                                              <  2:158457/141‑1 (MQ=255)
          gACATTTTCAGAAGCGGATGTCTATAAAGGGCAACTACTAACATCACCATATACACGGAGCAAATTTTATAGTGAATTAAAAGTATTAGAAGCTGTAAATAATGGCTTAGATGGTCAGATTGTACGTGTTGGTAATTTGAc                                                                                                           <  1:208307/141‑1 (MQ=255)
          gACATTTTCAGAAGCGGATGTCTATAAAGGGCAACTACTAACATCACCATATACACGGAGCAAATTTTATAGTGAATTAAAAGTATTAGAAGCTGTAAATAATGCCTTATATAGTAAGATTGTACGTGTTGGTAATTTGAc                                                                                                           >  2:114047/1‑141 (MQ=255)
                  cAGAAGCGGATGTCTATAAAGGGCAACTACTAACATCACCATATACGCGGAGCAAATTTTATAGTGAATTAAAAGTATTAGCAGCTGTAAATAATGGCTTAGATGGTCAGATTGTACGTGTTGGTAATTTGACGAATCCtt                                                                                                   >  1:107255/1‑141 (MQ=255)
                      aGCGGATGTCTATAAAGGGCAACTACTAACATCACCATATACACGGAGCAAATTTTATAGTGAATTAAAAGTATTAGAAGCTGTAAATAATGGCTTAGATGGTCAGATTGTACGTGTTGGTAATTTGACGACACATTACaa                                                                                               >  1:159916/1‑141 (MQ=255)
                                         cAACTACTAACATCACCATATACACGGAGCAAATTTTATAGTGAATTAAAAGTATTAGAAGCTGTAAATAATGGCTTAGATGGTCAGATTGTACGTGTTGGTAATTTGACGAATCCTTACAATGGAAGATGGCATATgaga                                                                            >  1:222929/1‑141 (MQ=255)
                                                      cACCATATACACGGAGCAAATTTTATAGTGAATTAAAAGTATTAGAAGCTGTAAATAAAGGCTTAGATGGTCAGATTGTACGTGTTGGTAATTTGACGAATCCTTACAATGGAAGATGGCATATGAGAAATATAAAGACTa                                                               >  2:156090/1‑141 (MQ=255)
                                                        ccATATACACGGAGCAAATTTTATAGTGAATTAAAAGTATTAGAAGCTGTAAATAATGGCTTAGATGGTCAGATTGTACGTGTTGGTAATTTGACGAATCCTTACAATGGAAGATGGCATATGAGAAATATAAAGACTacc                                                             >  2:83103/1‑139 (MQ=255)
                                                                               taGTGAATTAAAAGTATTAGAAGCTGTAAATAATGGCTTAGATGGTCAGATTGTACGTGTTGGTAATTTGACGAATCCTTACAATGGAAGATGGCATATGAGAAATATAAAGACTAACCGTTTTTCAATGGTAatgaatga                                      >  2:21717/1‑141 (MQ=255)
                                                                                           aGTATTAGAAGCTGTAAATAATGGCTTAGATGGTCAGATTGTACGTGTTGGTAATTTGACGAATCCTTACAATGGAAGATGGCATATGAGAAATATAAAGACTAACCGTTTTTCAATGGTAATGAATGATTTGTTACAACt                          >  1:129237/1‑141 (MQ=255)
                                                                                               tgaGAAGCTGTAAATAATGGCTTAGATGGTAAGATTGTACGTGTTGGTAATTTGACGAATCCTTACAATGGAAGATGGCATATGAGAAATATAAAGACTAACCGTTTTTCAATGGTAATGAATGATTTGTTACAACTGGAt                      >  2:277354/3‑141 (MQ=255)
                                                                                                          agagaatGGCTTAGATGGTCAGATTGTACGTGTTGGTAATTTGACGAATCCTTACAATGGAAGATGGCATATGAGAAATATAAAGACTAACCGTTTTTCAATGGTAATGAATGATTTGTTACAACTGGATTGTATCGGGGt           <  2:237443/137‑1 (MQ=255)
                                                                                                          aaaTAATGGCTTAGATAGTCAGATTGTACGTGTTGGTAATTTGACGAATCCTTACAATGGAAGATGGCATATGAGAAATATAAAGACTAACCGTTTTTCAATGGTAATGAATGATTTGTTACAACTGGATTGTATCGGGGt           >  1:195389/1‑141 (MQ=255)
                                                                                                           aataatGGCTTAGATGGTCAGATTGTACGTGTTGGTAATTTGACGAATCCTTACAATGGAAGATGGCATATGAGAAATATAAACACTAATTGGTGTAAAATGGTAATGAATGATTTGTTACAACTGGATTGTATCGGGAtt          >  1:278279/1‑141 (MQ=255)
                                                                                                                   gttAGATGGTCAGATTGTAGGTGTTGGTAATTTGACGAATCCTTACAATTGAAGATGGGATATGAGAAATATAAAGACTAACCGTTTTTGAATGGTAATGAATGATTTGTTACAACTGGATTGTATCGGGGTTAGCATGGc  <  2:108818/140‑1 (MQ=255)
                                                                                                                              |                                                                                                                                 
CAGAAGATGTGACATTTTCAGAAGCGGATGTCTATAAAGGGCAACTACTAACATCACCATATACACGGAGCAAATTTTATAGTGAATTAAAAGTATTAGAAGCTGTAAATAATGGCTTAGATGGTCGGATTGTACGTGTTGGTAATTTGACGAATCCTTACAATGGAAGATGGCATATGAGAAATATAAAGACTAACCGTTTTTCAATGGTAATGAATGATTTGTTACAACTGGATTGTATCGGGGTTAGCATGGC  >  USA300TCH1516_ALE/210157‑210412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: