Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,048,846 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,048,8460GC100.0% 616.1 / NA 260intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (122/138);  total (122/138)
*CP0425831,048,8470CG99.6% 613.7 / NA 260intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (122/137);  minor base A (0/1);  total (122/138)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,048,8480TA99.6% 610.8 / NA 260intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (121/138);  minor base G (1/0);  total (122/138)
Fisher's exact test for biased strand distribution p-value = 4.69e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 260 total aligned reads displayed.

CAAATGAGCAACGGGTCATGTTGTTGGCGAGCCACCAGTGCCTGCCAGTCAATATCTGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCGCTTGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTAGTAGTAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGATGCAGTGGATGCCAATAAGCCAGAAAGCCGGTGCAGCCTGGGGC  >  CP042583/1048568‑1049127
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                       
cAAAGGAGCAACGGGTCATGTTGTTGGCCACCCACCAGTGCCTGCCAGTCAATATCTGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCaa                                                                                                                                                                                                                                                                                 <  1:786464/289‑1 (MQ=255)
    tGAGAAACGTGTCATGTTGTTGGCCAGCCGCCAGTGCCTGCCAGTAAATATCTACCAGTAAACGACTGGGACCGTAACCGCCGCTGACAACCATCACGATGGTGTTGGGGGTAGTCAGTCTGGCAATGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTaa                                                                                                                                                                                                                                                                             <  2:1159314/289‑1 (MQ=255)
      aGCAACGGGTCATGTTGTTGGCGAGCCACCAGTGCCTGCCAGTCAATATCTGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGAGGGGGCAATTAAGt                                                                                                                                                                                                                                                                           >  2:918882/1‑289 (MQ=255)
           cGGGTCATGTTGTTGGCGAGCCACCAGTGCCTGCCAGTCAATATCTGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAAc                                                                                                                                                                                                                                                                      <  1:1944317/289‑1 (MQ=255)
                gtggtggtgggCGAGCCACCAGTGCCTGCCAGTCAATAGCGGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAgaga                                                                                                                                                                                                                                                                 <  2:1888318/280‑1 (MQ=255)
                caggttgatGGCGAGCCACCAGTGCCTGTCAGTAAATATCTGCCAGTAACCGACTGGCACCGTAACCGCCGCGTAAAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAgaga                                                                                                                                                                                                                                                                 <  2:1998449/286‑1 (MQ=255)
                cATGTTGTTGGCGAGCCCCCACGGCCTCCCAGTCAATATCTGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTCGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAgaga                                                                                                                                                                                                                                                                 <  2:1137544/289‑1 (MQ=255)
                cATGTTGTTGGCGAGCCACCAGTGCCTGCCAGTCAATATCTGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAgaga                                                                                                                                                                                                                                                                 <  1:1118377/289‑1 (MQ=255)
                       ttgGCGAGCCACCAGTGCCTGCCAGTCAATATCTGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCa                                                                                                                                                                                                                                                          >  1:1888318/1‑289 (MQ=255)
                                 accaGTGCTCGCCCGTCAATATCTGCCAGTAAACGGCTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCt                                                                                                                                                                                                                                                <  2:895208/289‑1 (MQ=255)
                                   caGTGCCTGCCAGTCAATATCTGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGa                                                                                                                                                                                                                                              <  1:1484312/289‑1 (MQ=255)
                                           gccAGTCAATATCTGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGGTGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTaa                                                                                                                                                                                                                                                                             <  1:1039499/250‑1 (MQ=255)
                                             cAGTCAATATCTGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCGCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAAACGaaaa                                                                                                                                                                                                                                    >  2:1103339/1‑288 (MQ=255)
                                              aggcAATATCTGCCAGTAAACGACTGGGACCGTAACCGGCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACg                                                                                                                                                                                                                                   <  2:2084978/286‑1 (MQ=255)
                                                tCAATATCTGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAg                                                                                                                                                                                                                                        >  2:504149/1‑282 (MQ=255)
                                                tCAATATCTGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGaa                                                                                                                                                                                                                                 >  1:569698/1‑289 (MQ=255)
                                                 cAATATGTGCCATTAAACGACTGGCACCGGAGCCGCGGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGaa                                                                                                                                                                                                                                 <  2:1457047/288‑1 (MQ=255)
                                                 cAATATCTGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACg                                                                                                                                                                                                                                   <  2:2222287/286‑1 (MQ=255)
                                                 cAATATCTGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGaa                                                                                                                                                                                                                                 <  2:1329888/288‑1 (MQ=255)
                                                            aGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCAt                                                                                                                                                                                                                      >  1:1071904/1‑288 (MQ=255)
                                                              tAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGcc                                                                                                                                                                                                                   >  1:201591/1‑289 (MQ=255)
                                                               aaaCGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATg                                                                                                                                                                                                                     <  1:100967/286‑1 (MQ=255)
                                                               aaaCGACGGGAACCGAAACAGCGGCGTAAAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATg                                                                                                                                                                                                                     <  2:679945/286‑1 (MQ=255)
                                                                 aCGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCt                                                                                                                                                                                                                <  1:729163/289‑1 (MQ=255)
                                                                    aCTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACg                                                                                                                                                                                                                                   <  2:1343949/267‑1 (MQ=255)
                                                                    aCTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACg                                                                                                                                                                                                                                   >  1:1343949/1‑267 (MQ=255)
                                                                      tGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGgt                                                                                                                                                                                                           <  1:1138797/289‑1 (MQ=255)
                                                                             gTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAg                                                                                                                                                                                                             <  1:508273/280‑1 (MQ=255)
                                                                               aaCCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTTTGCCGTTg                                                                                                                                                                                                  >  1:969383/1‑289 (MQ=255)
                                                                                              ccagcACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGa                                                                                                                                                                                   >  1:2056396/1‑289 (MQ=255)
                                                                                               cagcACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACgg                                                                                                                                                                                      <  1:2099445/285‑1 (MQ=255)
                                                                                                  cACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTc                                                                                                                                                                                >  1:1282225/1‑288 (MQ=255)
                                                                                                   cggagggggtTGGTGGAATTCAGTATGGCAAGGGAATTGAGACCTTCCAGACGCTCTGTTTCCGTACCCGCAAACGGCTCAAAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCGGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTcc                                                                                                                                                                               <  2:1732904/280‑1 (MQ=255)
                                                                                                   aCGAGGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCa                                                                                                                                                                              <  1:1845068/289‑1 (MQ=255)
                                                                                                      aTGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGGATATCATGCCGCTTAGGTGTTCCGTTGTCACCTCACCGGCGATTCCAgg                                                                                                                                                                            >  2:1808059/1‑288 (MQ=255)
                                                                                                          tgtTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCtata                                                                                                                                                                       >  1:1609341/1‑289 (MQ=255)
                                                                                                          tgtTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCtat                                                                                                                                                                        <  1:1185573/288‑1 (MQ=255)
                                                                                                          tgtTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCtat                                                                                                                                                                        <  1:327513/288‑1 (MQ=255)
                                                                                                                 ggTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGCCAACAGAAACGAAATGTATATCATGCCGCTTAGGTTTGCCGTATTCACCTCAACGGCGATTCCAGGCTATAAggcaag                                                                                                                                                                >  2:556830/1‑285 (MQ=255)
                                                                                                                      tcagtcTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATg                                                                                                                                                                                                                     <  2:1267760/231‑1 (MQ=255)
                                                                                                                      tcagtcTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATg                                                                                                                                                                                                                     >  1:1267760/1‑231 (MQ=255)
                                                                                                                      tcagtcTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCa                                                                                                                                                                              >  2:1749918/1‑270 (MQ=255)
                                                                                                                      tcagtcTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCa                                                                                                                                                                              <  1:1749918/270‑1 (MQ=255)
                                                                                                                      tcagtcTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAgaagaa                                                                                                                                                           >  1:1216728/1‑289 (MQ=255)
                                                                                                                           cgcacaagcgacatGAGATCTTACCGCCGCTCTGTTGCCGTACCCGAAAAACGCTCACAACGACGGGCAATAACCTCGCCGTTATTGAATTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGt                                                                                                                                                         <  2:1268965/273‑1 (MQ=255)
                                                                                                                                aaGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTga                                                                                                                                                 <  1:1425877/289‑1 (MQ=255)
                                                                                                                                    gAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATg                                                                                                                                             >  1:47909/1‑289 (MQ=255)
                                                                                                                                        tGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGttt                                                                                                                                         <  1:1329786/289‑1 (MQ=255)
                                                                                                                                             tCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCtat                                                                                                                                                                        >  1:80019/1‑253 (MQ=255)
                                                                                                                                              cTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCt                                                                                                                                                                                                                                                >  2:2034196/1‑180 (MQ=255)
                                                                                                                                               ttCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACg                                                                                                                                                                                                                                   >  2:1957037/1‑192 (MQ=255)
                                                                                                                                                 cccgACGCCCTGTTTCCGTACCGGGAAAACGCTACCAACGACGGGCAAGAACCTCGAAGTTATTGACTTGGTGCCCCGCGGCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTg                                                                                                                                <  2:1235205/286‑1 (MQ=255)
                                                                                                                                                       gCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATtgtg                                                                                                                          <  2:592482/289‑1 (MQ=255)
                                                                                                                                                         tctGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTcc                                                                                                                                                                                                                                                     <  2:1445145/164‑1 (MQ=255)
                                                                                                                                                         tctGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACgg                                                                                                                                                                                      >  1:280175/1‑227 (MQ=255)
                                                                                                                                                         tctGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACgg                                                                                                                                                                                      <  2:280175/227‑1 (MQ=255)
                                                                                                                                                         tctGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTc                                                                                                                                                                                >  1:1594197/1‑233 (MQ=255)
                                                                                                                                                         tctGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGtt                                                                                                                        >  1:1480978/1‑289 (MQ=255)
                                                                                                                                                                   tACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATCAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGAtt                                                                                                                             >  2:1685430/1‑274 (MQ=255)
                                                                                                                                                                   tACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGAtt                                                                                                                             <  1:1685430/274‑1 (MQ=255)
                                                                                                                                                                   tACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGt                                                                                                              >  1:1431516/1‑289 (MQ=255)
                                                                                                                                                                     cccGCAAAACGCTCACAACGGCGGCCAAGAACCTCGACGTTATGGACTAGATACCGCGCGTCGGTAAGGCCCCGGATACCACGGCGCGCGGCGTGCTGTTTAACTCAGTAACCCGATGGGGCACTTAAGTGAAATAGAGACATGGCAATCTCTTGCTGACAACAGAAACGTAATGTATATCATGCCGCTTAGGTATGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATGGAGATGGTTTGCCTTTTTGATTGTGttattgctgtgttg                                                                                                            >  2:1429536/1‑280 (MQ=255)
                                                                                                                                                                     cccGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTg                                                                                                            <  1:674379/289‑1 (MQ=255)
                                                                                                                                                                       cGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTcc                                                                                                                                                                               <  2:722480/220‑1 (MQ=255)
                                                                                                                                                                         cAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGAt                                                                                                                              >  2:1488200/1‑267 (MQ=255)
                                                                                                                                                                          aaaaCGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTgttcat                                                                                                       <  1:897592/289‑5 (MQ=255)
                                                                                                                                                                          aaaaCGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTgttcat                                                                                                       <  1:2235888/289‑5 (MQ=255)
                                                                                                                                                                          aaaaCGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTgttcat                                                                                                       <  1:1521260/289‑5 (MQ=255)
                                                                                                                                                                               gCTCACAGAGACGGGAAATAACCTCGACGTTATTGACTTGATGCCCCGAGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTgttcatcaaag                                                                                                  <  2:1307096/289‑10 (MQ=255)
                                                                                                                                                                               gCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTgttcatcaaag                                                                                                  <  2:1052255/289‑10 (MQ=255)
                                                                                                                                                                                   acaACGACGGGCAATAGCCTAGACGTTATTGAATTGATGCCCCGGGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTgttcatcaaagcat                                                                                               <  2:959817/288‑13 (MQ=255)
                                                                                                                                                                                    caAAGACGGGCAATGACCTCGACGTGAGTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTgttcatcaaagcatga                                                                                             <  2:2126235/289‑15 (MQ=255)
                                                                                                                                                                                          cgGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATAc                                                                                       >  2:1578992/1‑289 (MQ=255)
                                                                                                                                                                                             gCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGa                                                                                     >  1:714472/1‑288 (MQ=255)
                                                                                                                                                                                               aaTAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAAc                                                                                   <  1:1100304/288‑1 (MQ=255)
                                                                                                                                                                                                 tAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATTACTATACGAAacc                                                                                 >  1:1974050/1‑288 (MQ=255)
                                                                                                                                                                                                               ttGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGgt                                                                                                                                                                                                           >  2:302615/1‑152 (MQ=255)
                                                                                                                                                                                                               ttGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGgt                                                                                                                                                                                                           <  1:302615/152‑1 (MQ=255)
                                                                                                                                                                                                                       aTGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCgg                                                          >  2:1070075/1‑289 (MQ=255)
                                                                                                                                                                                                                       aTGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCgg                                                          >  1:228057/1‑289 (MQ=255)
                                                                                                                                                                                                                       aTGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGCATAGAAGAAGTGAAATCGAGATGGTTTGCCTTTATGATTGTGTTATTAGCGGGTCTTTCATCAAAGCATGACTATACGAACCCGCCGTGGCACGCGAAAGTTACgg                                                          >  2:1939400/1‑289 (MQ=255)
                                                                                                                                                                                                                           cccGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCa                                                      <  2:228057/289‑1 (MQ=255)
                                                                                                                                                                                                                           cccGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCa                                                      <  1:944240/289‑1 (MQ=255)
                                                                                                                                                                                                                             cgcgTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAAc                                                    <  1:1070075/289‑1 (MQ=255)
                                                                                                                                                                                                                              gcgTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATCAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACg                                                   >  1:1450488/1‑289 (MQ=255)
                                                                                                                                                                                                                                           gcTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGAGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGATGCAGTg                                       <  1:2222636/288‑1 (MQ=255)
                                                                                                                                                                                                                                               gATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTgtgt                                                                                                                         <  1:1370593/202‑1 (MQ=255)
                                                                                                                                                                                                                                               gATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTACTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTTCAACGTTCGATTCAGTGGATg                                   >  2:1075890/1‑288 (MQ=255)
                                                                                                                                                                                                                                                     aCGCGGGGCGGGGGGCGGTTGAATTAAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATGCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGATGCAGTGGATGCCAATaa                            <  2:2227377/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         aGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACg                                                                                                                                                                                                                                   <  2:1646094/86‑1 (MQ=255)
                                                                                                                                                                                                                                                         aGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTTCAACGTGCGATGCAGTGGATGCCAATAAGCCa                        >  1:2168482/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         aGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGATGCAGTGGATGCCAATAAGCCa                        >  1:1660611/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         aGCGCGGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGATGCAGTGGATGCCAATAAGCCa                        >  1:1642986/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           cgcgGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGa                                                                                                                               >  2:434572/1‑184 (MQ=255)
                                                                                                                                                                                                                                                           cgcgGCGTGCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGATGCAGTGGATGCCAATAAGCCAGa                      >  2:392959/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                   gCTGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGATGCAGTGGATGCCAATAAGCCAGAAAGCCGGt              <  1:1780648/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tGTTTAATGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGATGCAGTGGATGCCAATAAGCCAGAAAGCCGGTg             <  2:1625583/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGATAGTTCCGGTGCAACGTGCGATGCAGTGGATGCCCATAACCCAGAAACCCGGGGCAGCCTgg     >  2:1548542/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            tGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATGGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTTGAACGCGAAAGTTCCGTTGCAACGTGCTATGCAGTGGATGCCAAAAAGCCAGAAAGCCGGTCCAGCCTgg     >  2:1404674/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            tGCAGTAACCCGATGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATGGGTTTATTAGCGGGTTGTTCAGCAAAGCATGACTATAAGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGATGAAGTGGATGCCAATAAGCCCACAAGCCGGTACACCCttg     >  2:1195970/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                       
CAAATGAGCAACGGGTCATGTTGTTGGCGAGCCACCAGTGCCTGCCAGTCAATATCTGCCAGTAAACGACTGGCACCGTAACCGCCGCGTACAGCCAGCACGATGGTGTTGGGGGTAGTCAGTCTGGCAAGGGAATTGAGATCTTCCAGACGCTCTGTTTCCGTACCCGCAAAACGCTCACAACGACGGGCAATAACCTCGACGTTATTGACTTGATGCCCCGCGTCGGTAAGGCGCTGGATACCACGCAGCGCGGCGTGCTGTTTAATGCAGTAACCGCTTGGGGCAATTAAGTGAAACAGAGACATGGCAATTCCTTGCTGACAACAGAAACGAAATGTATATCATGCCGCTTAGGTGTGCCGTTGTCACCTCAACGGCGATTCCAGGCTATAAGGATAGAAGAAGTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTAGTAGTAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGATGCAGTGGATGCCAATAAGCCAGAAAGCCGGTGCAGCCTGGGGC  >  CP042583/1048568‑1049127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A