Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,049,407 |
3 bp→TCA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,049,407 | 0 | A | T | 98.7%
| 531.7
/ NA
| 227 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (119/105); minor base G (0/3); total (119/108) |
| Fisher's exact test for biased strand distribution p-value = 1.06e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,049,408 | 0 | G | C | 99.6%
| 530.6
/ NA
| 227 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (116/108); total (119/108) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,049,409 | 0 | T | A | 99.6%
| 537.7
/ NA
| 227 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (118/108); minor base C (1/0); total (119/108) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 227 total aligned reads displayed.
GTCGATCCACAATTGATCACGGCGATTATCGCTATCGAAAGCGGTGGTAATCCGAACGCGGTGAGTAAAAGCAATGCCATTGGTTTGATGCAGTTAAAAGCTAGTACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTAGTATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGAGTTACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCAGCAGTG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTGCCGCTCCACCGTCGGGCTGACGTTAAGAAAA > CP042583/1049128‑1049687
|||
tCGATCCACAATTGATCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTaa > 2:863290/1‑289 (MQ=255)
tCGATCCACAATTGATCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTa > 2:911147/1‑288 (MQ=255)
cGATCCACAATTGATCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGTTCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTaa < 2:231601/288‑1 (MQ=255)
ccACAATTGATCACGGGGATTTTCGCTATCGAATCGGGGGGGAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGTCCGTGATGGTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACgggg < 2:1061482/289‑1 (MQ=255)
cacaATTGATCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGc < 1:888680/289‑1 (MQ=255)
ttGATCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCCCTGGTGGTTTCATACGCTAACGGGGCTgggt > 2:852820/1‑287 (MQ=255)
aTCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCCTTGAAGATCCGAAGGTACTGCAATATGCCCCGGTGGTGTCATACGCTAACGGGGccgtgtc > 2:1495776/1‑281 (MQ=255)
aTCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTgcgc > 1:537078/1‑289 (MQ=255)
aTCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGAGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGATAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGCGCCGACGACCAGCGAGCTGACAAATCCAGAGCGTAATATTTCAATGGGGGCTGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGATGGTACTGCAATATGCGTTGGTGGTGTCAGACGCTAATGGGGCAGGTgcgc > 2:1074902/1‑289 (MQ=255)
cACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGGGTGCTTCGCCAAAGGGGGAGGGGCcct > 2:196513/1‑288 (MQ=255)
aTTATCACTATCGAATCGGGTGTGAATCCGAACGCGGTGAGTAAAGCGAATGGCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACgg < 2:448922/288‑1 (MQ=255)
atcgaatcgggtggtAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTctcgt < 2:228454/280‑5 (MQ=255)
gtcgggtggtCATCCGAACGCGGTGAGTAAATCGAATGCCGGTGGTGTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGGCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAAGCGGCCCGCTGGCAGTCATTGAAGATCCGAAGGTACTGCAATATGTGCTGGTGGTGGCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTctcatcaga < 2:1092366/284‑9 (MQ=255)
atggggtggtAATCCCAAAGCGGTGACTAAATCGAATGCCATTGGTTTGTTGCGGTTAAAAGCTTCAACCTCCGGACGGGGGCGTTCTCGCCCAATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTctcgtcaga < 2:461028/284‑9 (MQ=255)
cGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGa > 1:148944/1‑288 (MQ=255)
gAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATc > 1:642764/1‑289 (MQ=255)
tGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGGTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGGGATCAggcaaag > 2:1898911/1‑283 (MQ=255)
aGTAAAAGGAATGCCAATGGTTTGATGCAGGTAAACGCTTCAACCTCCGGACGTGATGTTTATCGCCGGATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATc < 2:976004/288‑1 (MQ=255)
aatcgaaTGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGa > 1:1852410/6‑289 (MQ=255)
tcgaaTGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCTAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGAtt < 1:1735518/286‑1 (MQ=255)
tcgaaTGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACTGACTTTC‑TCTGCGTATCGGAAAAAGGCGCTCACCAAAATccaatata > 2:1859351/4‑282 (MQ=255)
aTGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGa > 2:438463/1‑289 (MQ=255)
aTGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGa > 1:1070203/1‑289 (MQ=255)
ttGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGt < 1:1783113/289‑1 (MQ=255)
tGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTcc > 1:669549/1‑288 (MQ=255)
gTTCAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAACAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCGGGCAGGCATTGAAGATCCGAAGGTACCGCAATATGCGCTGGTGGTGTCATTCGCTAACGGGCCAGGTGCGATTCTACGGACTTTATCGTCAG‑ATTGGCAAAAGGCGATCACCAAAACACACGATTTGGATGACGCCGAGTTCCTctac > 2:662214/1‑286 (MQ=255)
gTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGaa > 2:567299/1‑289 (MQ=255)
gTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGa > 1:1196208/1‑288 (MQ=255)
aagcttcaaCCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGt < 2:942114/281‑1 (MQ=255)
agcttcaaCCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTa > 1:357271/8‑289 (MQ=255)
ttcaaCCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑AGCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAgcg < 1:1909472/285‑1 (MQ=255)
caaCCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGcgcg > 1:715887/3‑289 (MQ=255)
caaCCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACCTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAacactgaacccg > 2:285492/3‑281 (MQ=255)
ccGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCa < 1:1244100/289‑1 (MQ=255)
cGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCa > 1:1739792/1‑288 (MQ=255)
cGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGACCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCa > 1:1470931/1‑288 (MQ=255)
ggACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCAcc < 1:1337002/289‑1 (MQ=255)
ggACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAAAGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCAc > 1:1129695/1‑288 (MQ=255)
cgggATGTTTATCGGCGTATGGGCTGGAGTGGTGAGCCGAGGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCt < 2:1902871/285‑1 (MQ=255)
tGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCCCGAACCCGTAGCGCG‑AAATCCCCCCgc > 2:1644535/1‑288 (MQ=255)
ttATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCa < 1:911147/288‑1 (MQ=255)
tacgaccGTAGGGGCTGGGGTGGTGGGCCGACGACCGGGGAGCTGAAAAATCCAGGGCTTAATATTTCAATGGGGGCGGCTTACCTGAATATGCTGGAAACCGGCCCGCTGGCAGGCAGTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAgg < 2:1701874/284‑1 (MQ=255)
tCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAAc < 2:1821895/229‑1 (MQ=255)
tCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAAc > 1:1821895/1‑229 (MQ=255)
cGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTc < 1:581790/289‑1 (MQ=255)
cGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTc < 1:987830/289‑1 (MQ=255)
gcagaaTGGGCTGGAGTGGTGAGCCGGCGAACAGCGAGGTGAAAAATCCAGAGCGTAATATGTCAATGGGGGCGGCTGACCTGAATATTCTGGAAACCGGCGCGCTGGCAGGCATTGAAGATCGGAAGGTACTGCAATATGCGATGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCt < 2:1556597/282‑1 (MQ=255)
cGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCcg > 2:1513318/1‑288 (MQ=255)
gggCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCtat < 1:1074902/289‑1 (MQ=255)
gggCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCtat < 1:43561/289‑1 (MQ=255)
ggCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCtat < 2:1157442/288‑1 (MQ=255)
ggAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCt > 2:365343/1‑288 (MQ=255)
aGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACa > 1:150031/1‑289 (MQ=255)
aGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCACAGGCTCCGCGCTCTCTCTACa > 2:1608356/1‑289 (MQ=255)
gtgAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGAGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACt > 1:731923/1‑289 (MQ=255)
tgAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACt < 1:738319/288‑1 (MQ=255)
tgAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCCCCGCGCTATATCTACACACtg > 1:1021199/1‑288 (MQ=255)
gcgacgcCCAGGGGGTTGAAAAATCCAGACGGTAATATTTCAAGGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAg < 2:699698/287‑1 (MQ=255)
ccGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTGCGCGCTATATCTACAAACTTGAGc > 2:904658/1‑289 (MQ=255)
ccGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTAAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATGGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAg < 2:1666431/288‑1 (MQ=255)
cgacgaCCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGc < 1:1644535/288‑1 (MQ=255)
cgacgaCCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCa < 2:263434/289‑1 (MQ=255)
cgacgaACAGGTGGCTGAAAAATCCAGAGCTGAATATTTCAAGGGGGGGGGCTTACCTGAGTATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCa < 2:424700/289‑1 (MQ=255)
cgacgaACAGCGAGCTGAAAAATCCAGAACGTAATATTTCGATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATACGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAg < 1:46586/287‑1 (MQ=255)
acgacCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAg > 2:752588/1‑288 (MQ=255)
cgacCAGCGAGCTGAAAAAGCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGc < 2:13267/289‑1 (MQ=255)
gacCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGc > 1:828127/1‑288 (MQ=255)
gCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTgg > 1:1839960/1‑288 (MQ=255)
gCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTgg > 2:955461/1‑288 (MQ=255)
aGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGAcg < 2:1739792/288‑1 (MQ=255)
tGAAAAATCCAGGTCGTAATATGTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGa < 2:1852410/288‑1 (MQ=255)
aTCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAAt < 1:1055989/289‑1 (MQ=255)
agCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGAcg < 1:265844/273‑1 (MQ=255)
ttcaaTGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGCGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGt < 1:285492/285‑1 (MQ=255)
tGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTcg > 1:1186102/1‑274 (MQ=255)
tGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCt > 1:1413310/1‑289 (MQ=255)
tGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCCATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCt > 1:869688/1‑289 (MQ=255)
ggcggcTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCtttt > 2:1616052/1‑288 (MQ=255)
ggcggcTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCtttt > 1:136370/1‑288 (MQ=255)
ggcggcTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCCCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCtttt > 2:1282620/1‑288 (MQ=255)
cTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCg < 2:1196208/288‑1 (MQ=255)
cTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCAATTTGTCCGCTTTTTCCCgg > 1:766191/1‑289 (MQ=255)
cTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGAGGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCgg > 2:348579/1‑289 (MQ=255)
ccTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCt > 2:496876/1‑288 (MQ=255)
ccTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGGAAATCAGTCGCGCACTTTCTCCGCTTTTTCCCGGGCt > 1:1905997/1‑288 (MQ=255)
tatTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACCGCATGCAAAGCAGTCGCGCACTTTGTCCGCTTTTTCCCCGTCTtccccc > 2:1574562/1‑284 (MQ=255)
cgggatgccggccggGTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGAAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCgag < 2:1129695/282‑1 (MQ=255)
ggAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCgagag < 1:1298457/289‑1 (MQ=255)
ctggagggcaTTGAATTTCTGAAGTAACTGCAATAGGCGTTGGTGGTTGCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTTTCGTAAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGCCGACTTCCTCGAATAAGTGACGGG‑AACGCACACTGCGCCGCAGCATCCGCGCTATATCTACAAACTTCGGCAGGGACTGGACGCGGTGTACATCAGTCGCGGACTTTGTCCGCTTTTTCCCGGGCTTCACGCACGAGAGAGAAAATAAAcc < 2:799947/282‑1 (MQ=255)
tGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCg < 2:136370/288‑1 (MQ=255)
caTTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAAt < 1:955461/288‑1 (MQ=255)
aGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTGCCGCt < 1:1898911/289‑1 (MQ=255)
tCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGaaa < 2:1464437/264‑1 (MQ=255)
tCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTGCCGCTcc > 2:1785435/1‑288 (MQ=255)
tGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAACATAATCCGCTGTAATTGCCGCTCCACCGTCGGGCTg > 1:1811903/1‑289 (MQ=255)
atGGGCTGGTGGTGGCATAAGCTACCGGGGCAGGTGCGCTGAGACGAACTTTCTCGTCAG‑ATCGAAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGATGTCCTCGAACACGTAGCGCGAAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTGCCGCTCCACCGTCGGGCTGACGtt < 2:76745/289‑1 (MQ=255)
tGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTATCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTCAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGTGAAAATAATGCCCGGCAATTTCCGCTCCACCGTCGGGCTTACGTGaa > 2:1083618/1‑289 (MQ=255)
tGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTGCCGCTCCACCGTCGGGCTGACGTTaa > 1:519890/1‑289 (MQ=255)
cgcTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGCCTTCCCGCCCGAGAGAGAAAATAATCCGCTGTAATTGCGGCCCCCCCGCCGGCCTGCCGTTAAGa > 2:26167/1‑289 (MQ=255)
tggtggTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTGCCGTCCCACCGTCGGGCTGCCGTGAAGaaaa > 2:632874/1‑289 (MQ=255)
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GTCGATCCACAATTGATCACGGCGATTATCGCTATCGAAAGCGGTGGTAATCCGAACGCGGTGAGTAAAAGCAATGCCATTGGTTTGATGCAGTTAAAAGCTAGTACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTAGTATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGAGTTACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCAGCAGTG‑ATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCG‑AAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAAATCAGTCGCGCACTTTGTCCGCTTTTTCCCGGGCTTCTCGCTCGAGAGAGAAAATAATCCGCTGTAATTGCCGCTCCACCGTCGGGCTGACGTTAAGAAAA > CP042583/1049128‑1049687
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
