Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,920,363 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,920,3630GC98.5% 577.2 / NA 259intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/3);  new base C (127/128);  total (128/131)
Fisher's exact test for biased strand distribution p-value = 6.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01
*CP0425831,920,3640CG98.0% 578.1 / ‑6.0 259intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (126/126);  minor base A (1/4);  total (128/131)
Fisher's exact test for biased strand distribution p-value = 3.70e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,920,3650TA98.8% 579.2 / NA 259intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/3);  new base A (127/127);  total (128/131)
Fisher's exact test for biased strand distribution p-value = 2.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 259 total aligned reads displayed.

ACATGGCGTAGTAATACGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑GCTTACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACC  >  CP042583/1920083‑1920644
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                       
   tGGCGTAGTACTACGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATg                                                                                                                                                                                                                                                                                <  2:1051764/289‑1 (MQ=255)
   tGGCGTAGTAATACGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATg                                                                                                                                                                                                                                                                                <  2:980728/289‑1 (MQ=255)
   tGGCGTAGTAATACGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATg                                                                                                                                                                                                                                                                                <  2:415013/289‑1 (MQ=255)
   tGGCGTAGTAATACGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATg                                                                                                                                                                                                                                                                                <  2:1428551/289‑1 (MQ=255)
      cGTAGTAATACGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCt                                                                                                                                                                                                                                                                              <  1:1736706/288‑1 (MQ=255)
           taATACGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGTCTTTCCGTATTTCGTCTGAATAACG‑CGATCCTGCATCCTGGGCAt                                                                                                                                                                                                                                                                        >  2:1543642/1‑289 (MQ=255)
              tACGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATAcc                                                                                                                                                                                                                                                                     <  1:1657406/289‑1 (MQ=255)
               aCGCTTTCGCCTGCTCCCAGTCCGCTTGGGGGCTTGGCTCCCGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCa                                                                                                                                                                                                                                                                    <  2:1907135/289‑1 (MQ=255)
                cGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAg                                                                                                                                                                                                                                                                   >  1:1242041/1‑289 (MQ=255)
                    ttCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAg                                                                                                                                                                                                                                                               <  2:822047/289‑1 (MQ=255)
                     tCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGCATAAGG‑GGATAGTGCAGGCTGGGCATACCAGTCAGc                                                                                                                                                                                                                                                              >  2:202450/1‑289 (MQ=255)
                     tCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCCGTCAGc                                                                                                                                                                                                                                                              >  2:180888/1‑289 (MQ=255)
                     tCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGc                                                                                                                                                                                                                                                              >  1:1393002/1‑289 (MQ=255)
                     tCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCAGACCAGTCAGc                                                                                                                                                                                                                                                              >  1:1062132/1‑289 (MQ=255)
                     tCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCCCCACTGCTTTCAACATGGCTTGCCTTACTTTGTACGAATAAGG‑CGATACTGCATGCTGGGCAGACCAGTCAGc                                                                                                                                                                                                                                                              >  2:1582803/1‑289 (MQ=255)
                         cTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATg                                                                                                                                                                                                                                                          <  1:135603/289‑1 (MQ=255)
                                 aGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCtgatga                                                                                                                                                                                                                                                   >  1:960124/1‑288 (MQ=255)
                                    ccGCTTTGGGGATTGGCTCCAGATATTTTTCCGGCTGGCTGAAGTTATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAAcc                                                                                                                                                                                                                                                <  1:146059/288‑1 (MQ=255)
                                     cGCTTTGGGGATTGGCTCCAGATATTTTCCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAAcccc                                                                                                                                                                                                                                              <  1:259768/289‑1 (MQ=255)
                                      gCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGACAAAcccc                                                                                                                                                                                                                                              >  2:1255260/1‑288 (MQ=255)
                                       cTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCg                                                                                                                                                                                                                                             >  2:663689/1‑288 (MQ=255)
                                       cTTTGGGGATGGGCTCCAGATATTTTTCCCGCTGGCGGAAGTCATGATTACTCGCTTTCTCTCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACTTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCTTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGc                                                                                                                                                                                                                                            <  1:49782/289‑1 (MQ=255)
                                        tttGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGcc                                                                                                                                                                                                                                           <  1:817472/289‑1 (MQ=255)
                                             ggATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCatat                                                                                                                                                                                                                                       >  2:492960/1‑288 (MQ=255)
                                                 tGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCa                                                                                                                                                                                                                                  <  1:679203/289‑1 (MQ=255)
                                                 tGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCa                                                                                                                                                                                                                                  <  1:602034/289‑1 (MQ=255)
                                                  ggCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAg                                                                                                                                                                                                                                 >  1:1892598/1‑289 (MQ=255)
                                                    ctaatgttatTTTGTCAGATGGCGAGATTTATGTTGAAGCTCTTAAACGCGAAGCAAGCGGCGGCGACTTTTCACCAGGTAAAGAAAACCATCTTCTGAATTACCTTCTTTTTTCACATAGATAGGGCGAACAT‑AACACCAGCCATGCTGACGTTTAATGCTGTGCATTTTCTTAAACGCCTGCGCCACTGCTTTCAACTTGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCAGGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGt                                                                                                                                                                                                                                <  2:1441895/281‑1 (MQ=255)
                                                    cTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTc                                                                                                                                                                                                                               >  1:1332502/1‑289 (MQ=255)
                                                        aGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCCGCAATGCTGACCAACCCCGCCATATCTTCAGTCAcc                                                                                                                                                                                                                            >  2:59266/1‑288 (MQ=255)
                                                             tttttCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAAGGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTCCTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAAc                                                                                                                                                                                                                      <  2:1841444/289‑1 (MQ=255)
                                                              ttttCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAAc                                                                                                                                                                                                                      >  2:175587/1‑288 (MQ=255)
                                                              ttttCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTAAGCACTCCCGATGAACCCCGCACTCACTTCAGTCCCCCGCAAc                                                                                                                                                                                                                      >  2:972628/1‑288 (MQ=255)
                                                                       tGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCAtt                                                                                                                                                                                                            <  1:1509059/289‑1 (MQ=255)
                                                                                         aTCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCAcc                                                                                                                                                                                           >  1:217202/1‑288 (MQ=255)
                                                                                                                      tcTTTTCTCCTGGACAAAAAAACCGGCTTCTGCATAACCTTCTTTTTTCACATAGATAGGGAGAACAA‑AAAAAGAGCCATGCTGACGATTAATGCTATGCATTTTCTAAAACGCCAGCGCCACGGCTTTCAACATGGCTTGCCGTACGTCGTCAGAAAAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGa                                                                                                                                                               <  2:1535674/286‑1 (MQ=255)
                                                                                                                               cAGGTCAAGAACACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATTCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGcc                                                                                                                                                    <  1:100006/289‑1 (MQ=255)
                                                                                                                                   tCAAGAAACCCAACTTCTGCATTACCTTCTGTTTT‑ACAATGATTTGGCCGACATAAACACCAGCATTGTTGACGTTTAAGGCTATGATTTTTCTTAAACCCCAGCGCCACTCCTTTCAACAGGGCTTGCCTTACTTCGTCCGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGt                                                                                                                                                 <  2:138961/288‑1 (MQ=255)
                                                                                                                                     aaGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCCCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTcc                                                                                                                                              >  2:1315904/1‑289 (MQ=255)
                                                                                                                                            ccAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCCCGCCATTCACCCTCCATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGAAGACACCCGCCCCTTCCAGTTCtt                                                                                                                                       >  2:1895715/1‑289 (MQ=255)
                                                                                                                                                cTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCCGTCACCAGCAACGACCGCCACTCACCCCCAATTTTCACCTCTTCACCAAAAACGATATTCGGCACTATGACACCGGCCCGTTCCAGTTCATTAAt                                                                                                                                   >  2:1172782/1‑289 (MQ=255)
                                                                                                                                                 ttCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTc                                                                                                                                               >  2:582144/1‑276 (MQ=255)
                                                                                                                                                    tGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCGGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTAc                                                                                                                                >  1:592995/1‑288 (MQ=255)
                                                                                                                                                    tGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTAc                                                                                                                                >  1:815298/1‑288 (MQ=255)
                                                                                                                                                     gCATTACCTTCTGTTCTCACATATATATGGCGAACAT‑ACCACCAGCCATGCTGACGATTAATGCTATGCATTTTCTTAACCGCCAGCGCCACTGCTTTCACCATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCCTACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCg                                                                                                                              <  1:1484806/289‑1 (MQ=255)
                                                                                                                                                       cttACTTTCTGTTTTCACAGACTCACGACGAATAC‑ACACACATCCAGACTGGAGATTAATGCTATGCGTTGCCTCAAACGCACGCACCACTGCGTTCACCAGGTCTTTCCGTCCTTCGGCAGAATAGGC‑CGATACTGCATGCCGGGCATACCGGTAAGAAATGCTGGTGAACCCCGCCATAGCTTCAGTCACCAGCAGCGCTCGCCATTCACCCTCAATTTTCACCGCGTCACCAAAAACGATCGTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAAGTACCGCa                                                                                                                            <  2:345660/288‑1 (MQ=255)
                                                                                                                                                       aTTCCCTTCTGTTTTCACCTAAATATGGCGAACAT‑ACCAACAGCCATCCTAACATTTCATCCTATGCATTTCCTTAATCGCCAGCGCCACTGTTTTCAACAGGGCTTGCCGTACTTCATCAGAATAAGG‑CGCTACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCGATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCa                                                                                                                            <  2:246335/289‑1 (MQ=255)
                                                                                                                                                       aTTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCa                                                                                                                            <  1:1111715/289‑1 (MQ=255)
                                                                                                                                                         tACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCaa                                                                                                                           >  1:1307264/1‑288 (MQ=255)
                                                                                                                                                                tGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCCCACgg                                                                                                                   >  1:582880/1‑289 (MQ=255)
                                                                                                                                                                     tCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACCCCGGCCCGTCCCAGTTCCTTAATTACCGCAACCCCACGGACaa                                                                                                               >  2:711179/1‑288 (MQ=255)
                                                                                                                                                                     tCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACaa                                                                                                               >  1:1597186/1‑288 (MQ=255)
                                                                                                                                                                       acaTAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCACAACCTCACGGACAATCg                                                                                                            >  1:1931721/1‑289 (MQ=255)
                                                                                                                                                                            gATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTgg                                                                                                        >  1:224637/1‑288 (MQ=255)
                                                                                                                                                                             atatGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGt                                                                                                       >  2:934143/1‑288 (MQ=255)
                                                                                                                                                                                   cGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGa                                                                                                >  1:636501/1‑289 (MQ=255)
                                                                                                                                                                                   cGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCCCACGGAACAGCCTTGGTCGCCCGa                                                                                                >  2:1680019/1‑289 (MQ=255)
                                                                                                                                                                                    gAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGa                                                                                                <  1:1172782/288‑1 (MQ=255)
                                                                                                                                                                                     aaCAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAAc                                                                                              >  2:1872174/1‑289 (MQ=255)
                                                                                                                                                                                       cAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACgg                                                                                            >  1:486890/1‑289 (MQ=255)
                                                                                                                                                                                       cAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCCCACGGACAATCGTTGGTCGGCCGAACgg                                                                                            >  2:484588/1‑289 (MQ=255)
                                                                                                                                                                                        aT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGa                                                                                           <  1:1364012/289‑1 (MQ=255)
                                                                                                                                                                                         t‑AACAACAGACATTCTGACGATTAATGCTATGCATTTTCTTACACGCCAGCGCCACTCCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATCCTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGAt                                                                                          <  2:865499/289‑1 (MQ=255)
                                                                                                                                                                                                caGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGt                                                                                     >  1:1127930/1‑288 (MQ=255)
                                                                                                                                                                                                   ccATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCCCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACgg                                                                                 >  1:362763/1‑289 (MQ=255)
                                                                                                                                                                                                   ccATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGACACCCCACGGACAATCCGTGGTCGCCCGAACgcaaaatgtcagg                                                                                 >  2:1852658/1‑277 (MQ=255)
                                                                                                                                                                                                   ccATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGACCTTCGGCACGATGACACCGGCCGGTTCCAGTTCTTTACTTAACGCACCCTCACGGACAACCGTTGCTCGGCCGAACGTATAACGTCCgg                                                                                 >  2:1673675/1‑289 (MQ=255)
                                                                                                                                                                                                   ccATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCATCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACgg                                                                                 >  1:1443273/1‑289 (MQ=255)
                                                                                                                                                                                                    cATGCTGACGATTAATGCTATGCATTTTCTTAACCGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGC‑CGATACTGCATGCTGGGCATACCAGTCAGAAATGCTGAGGAACCCCGCCATATCTTCAGTCACCAGCAACGCGCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTa                                                                                    <  1:753053/285‑1 (MQ=255)
                                                                                                                                                                                                    cATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTa                                                                                    <  1:342852/285‑1 (MQ=255)
                                                                                                                                                                                                     aTGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTAACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGGACGGaa                                                                               >  2:1212156/1‑289 (MQ=255)
                                                                                                                                                                                                     aTGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCCCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAAGTACCGCAACCACACGGACACTCGTGGGCCGGCCTAACGGATAACGCAAGGaa                                                                               >  2:1496349/1‑289 (MQ=255)
                                                                                                                                                                                                         tGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGa                                                                            <  1:1260649/288‑1 (MQ=255)
                                                                                                                                                                                                           aCGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAAc                                                                         >  1:1942145/1‑289 (MQ=255)
                                                                                                                                                                                                            cGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACa                                                                        >  2:937486/1‑289 (MQ=255)
                                                                                                                                                                                                             gATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAg                                                                       >  1:1568863/1‑289 (MQ=255)
                                                                                                                                                                                                              aTTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAga                                                                      >  1:246116/1‑289 (MQ=255)
                                                                                                                                                                                                                  aTGCTATGCATTTTCTTAAACCCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAgatgat                                                                  <  1:1582803/289‑1 (MQ=255)
                                                                                                                                                                                                                   tGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTc                                                                                                                                               >  1:972731/1‑211 (MQ=255)
                                                                                                                                                                                                                       aTGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTc                                                             >  1:275356/1‑289 (MQ=255)
                                                                                                                                                                                                                        tGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACTGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCa                                                            >  1:845939/1‑289 (MQ=255)
                                                                                                                                                                                                                         gtaTTTTCTTAACCGCGTGCGCCAGTGCTTCCAAGATAGCTTGCCGTACTTCGTCGCAAAAAGG‑CGATCCGGCATGCTGGGCATACCAGTCAGCAATGCTGATGACCCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCAt                                                           <  2:1242041/287‑1 (MQ=255)
                                                                                                                                                                                                                         gCATTTTCTTAAACGCCAGCGCCATTGCTTTCAACATGGCTTGACGTACTTCGTCAGAAAAAGGAGATTA‑TGCATGCTGGGCATACCAGTCAGAAATGCAAATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAGCGTTCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCAt                                                           <  1:1427647/289‑1 (MQ=255)
                                                                                                                                                                                                                         gCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCAt                                                           <  1:1778924/289‑1 (MQ=255)
                                                                                                                                                                                                                         gCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCAt                                                           <  1:1845640/289‑1 (MQ=255)
                                                                                                                                                                                                                         gCATTTTCTTAAACGCCAGCGCCACTGCTTTCAAAATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCAt                                                           <  2:622722/289‑1 (MQ=255)
                                                                                                                                                                                                                           agtttCTTAACCGCCGCGGCCACTGCTTGCAAAGTCGCTTCCCGTAATTCGTAAGAAAAAGG‑GGATAGTGCATGCTGGGCATCCCAGTCAGAAATGCTCATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATgc                                                         <  2:858967/287‑1 (MQ=255)
                                                                                                                                                                                                                           aTTTCCTTAAACCCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTAAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATgc                                                         <  1:1546357/289‑1 (MQ=255)
                                                                                                                                                                                                                               tCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCAt                                                           <  1:907623/283‑1 (MQ=255)
                                                                                                                                                                                                                                     aCGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTtacata                                               <  1:1315904/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         aaCATGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCt                           <  1:934143/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             tGGCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGAc                       <  1:1872174/289‑1 (MQ=255)
                                                                                                                                                                                                                                                              ggCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGt                                                                                                       <  1:466157/208‑1 (MQ=255)
                                                                                                                                                                                                                                                              ggCTTGCCGTACTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGt                                                                                                       >  2:466157/1‑208 (MQ=255)
                                                                                                                                                                                                                                                               gCTTGCCTTACTGCGTCATAAGAAGG‑CGATACGACATGCGGGGCATACCAGTAAGCAATGCTGATAAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGTTCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCg                         <  2:1307264/285‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tgacttctgaaGAATAAGG‑CGATACTCCATGCTGGCCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGACGCATTGCAc              <  2:954987/279‑1 (MQ=255)
                                                                                                                                                                                                                                                                         cTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCTTTGCGCTCGAGCCATTTCAccc            >  2:1772268/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                         cTTCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGACGCATTGCAccc            >  1:1632909/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                          ttCGTCAGAATAAGG‑CGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGAc                                                                                                                 <  1:566170/186‑1 (MQ=255)
                                                                                                                                                                                                                                                                               ctgAATAAGG‑CGATACTGCTCGCGGGCCATACCCGTCCACACTGCTTATTCACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCa      <  2:1632909/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                       
ACATGGCGTAGTAATACGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACAT‑AACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAGCGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGG‑GCTTACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCATACC  >  CP042583/1920083‑1920644

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A