Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,047,159 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,047,1590AT99.7% 720.1 / NA 301intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (142/158);  minor base G (0/1);  total (142/159)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*CP0425831,047,1600CG100.0% 720.9 / NA 301intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (142/159);  total (142/159)
*CP0425831,047,1610TA99.7% 722.1 / NA 301intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (142/158);  minor base C (0/1);  total (142/159)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 302 total aligned reads displayed.

ACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATACGCTAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAAACTGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTGCTGCCAACACGTTCGTTAAGCCCCTTACC  >  CP042583/1046874‑1047440
                                                                                                                                                                                                                                                                                             |||                                                                                                                                                                                                                                                                                       
       ttGAAACCGGGGAAGGGGAGGAATCCAGAAAATACCGAAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAAt                                                                                                                                                                                                                                                                                   <  2:1747946/287‑1 (MQ=255)
                cgGAAGGGGAGCAATCCAGCAAATACCGACAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCAGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCAGTAGGGGTTGCGAATTGGGCGATTACCCAGCAGAACACCGCACAGATACACCGCCAGAATACAGCTACCTTCCAGCGCAGTAGTTAATGAGACAACCAGAATACCg                                                                                                                                                                                                                                                                         >  1:2673074/1‑288 (MQ=255)
                cgGAAGGGGAGCAATCCAGCAAATACCGAAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCg                                                                                                                                                                                                                                                                         >  2:779003/1‑288 (MQ=255)
                          gCAATCCAGCAAATACCGAAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATg                                                                                                                                                                                                                                                               <  1:75318/288‑1 (MQ=255)
                               tcggCAAAAACCCGAAGGGGGCAGGGGAAGAATAACCTCCATGCGGAACAAAAGAGGGCCGGAAAGGCCATAGGCAGCAGATCGCATGGGTTAAACAACAACACCCGGCCCAGGAACATGGCGATTTTCGGCCGCCCGGCGAAGCCGTTCAAATTTTGAAAGGTGCCCTAACGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCa                                                                                                                                                                                                                                                         <  2:1921531/286‑1 (MQ=255)
                               ccAGCAAATACCGAAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCa                                                                                                                                                                                                                                                         <  2:2232359/289‑1 (MQ=255)
                                   cAAATACCGAAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCaa                                                                                                                                                                                                                                                        <  1:372743/286‑1 (MQ=255)
                                        accgaaaGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGAtata                                                                                                                                                                                                                                                <  1:1834729/284‑1 (MQ=255)
                                            aaaGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATcc                                                                                                                                                                                                                                            >  1:1503484/2‑289 (MQ=255)
                                                      ggCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAgg                                                                                                                                                                                                                                  >  1:82319/1‑289 (MQ=255)
                                                       gCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAAATTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCcg                                                                                                                                                                                                                                           >  1:1733435/1‑279 (MQ=255)
                                                          aagaaTATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCTCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGa                                                                                                                                                                                                                              <  1:1178538/289‑1 (MQ=255)
                                                          aagaaAATCCGCCATGCGGACAAAATGAGCGCCGGAATGGCAATCGGCAGCGGATCGTGTGGGTTCACCAACAGCCCCAGAACCAGGAACGTGGCGAGTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGa                                                                                                                                                                                                                              <  2:1188112/289‑1 (MQ=255)
                                                             aaTATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGc                                                                                                                                                                                                                           >  1:2243792/1‑289 (MQ=255)
                                                                atcatcCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGt                                                                                                                                                                                                                        <  1:2203922/289‑1 (MQ=255)
                                                                    tcCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGt                                                                                                                                                                                                                        >  2:1347871/1‑285 (MQ=255)
                                                                       aTGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGc                                                                                                                                                                                                                                                              <  2:2343807/244‑1 (MQ=255)
                                                                       aTGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGc                                                                                                                                                                                                                                                              >  1:2343807/1‑244 (MQ=255)
                                                                       aTGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGAt                                                                                                                                                                                                                             <  1:1201146/277‑1 (MQ=255)
                                                                       aTGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCAt                                                                                                                                                                                                                 >  2:1369417/1‑289 (MQ=255)
                                                                         gCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCAttt                                                                                                                                                                                                               >  1:2094801/1‑289 (MQ=255)
                                                                           ggACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTg                                                                                                                                                                                                              <  1:1476414/288‑1 (MQ=255)
                                                                           ggACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTg                                                                                                                                                                                                              <  1:2416537/288‑1 (MQ=255)
                                                                             aCAAAATGGACGCCGGACTGGCAATAGGCAGCAGATCGGTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCa                                                                                                                                                                                                            <  2:387454/288‑1 (MQ=255)
                                                                             aCAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGTCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTCGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATACTTTGCag                                                                                                                                                                                                           >  1:2014939/1‑289 (MQ=255)
                                                                               aaaaTGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGc                                                                                                                                                                                                                                                                        <  1:1990086/226‑1 (MQ=255)
                                                                                      gcgcCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGATAATGAGAAAATCAGAATACCGCCACCTAATGCCAGCAATGGATATAAACCGGCGGGCAGGGCGATGCGGTTGATCATTTGCATTAGTAAATa                                                                                                                                                                                                  >  1:1151915/1‑289 (MQ=255)
                                                                                                 gCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCa                                                                                                                                                                                        <  2:148805/288‑1 (MQ=255)
                                                                                                  gaaacggaagcggATCGATTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCaa                                                                                                                                                                                       <  2:2609511/280‑1 (MQ=255)
                                                                                                  acattagtagcggATCGCTTGGGGTAACCAACGGGCACAGCAGCAGGTACTCGGCGTTTTGCGCCAGGCAGGCGAGGCCGTTGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGAACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAATATCAGAAGACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAg                                                                                                                                                                                      <  2:1684832/281‑1 (MQ=255)
                                                                                                   aaTAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGTAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAg                                                                                                                                                                                      <  1:937994/288‑1 (MQ=255)
                                                                                                   aaTAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAg                                                                                                                                                                                      <  2:692990/288‑1 (MQ=255)
                                                                                                   aaTAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTGGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAg                                                                                                                                                                                      <  1:80712/288‑1 (MQ=255)
                                                                                                    aTAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCcg                                                                                                                                                                                                                                           <  2:644379/234‑1 (MQ=255)
                                                                                                     tAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGAcc                                                                                                                                                                                   <  1:348727/289‑1 (MQ=255)
                                                                                                       ggCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCa                                                                                                                                                                                                            <  2:343054/262‑1 (MQ=255)
                                                                                                        gcagcaGATCGCTTGGGTTAACCAACATCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTa                                                                                                                                                                                 <  1:2234849/288‑1 (MQ=255)
                                                                                                             agATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACa                                                                                                                                                                            <  1:1381513/288‑1 (MQ=255)
                                                                                                                 cGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGt                                                                                                                                                                                                                        <  2:2139517/240‑1 (MQ=255)
                                                                                                                 cGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGcc                                                                                                                                                                       <  1:1702786/289‑1 (MQ=255)
                                                                                                                      gggTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCAAAGACCTAGTACAAATCCCAGa                                                                                                                                                                   >  2:2367656/1‑288 (MQ=255)
                                                                                                                           aaCCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAAt                                                                                                                                                             >  1:2165421/1‑289 (MQ=255)
                                                                                                                            aCCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAAt                                                                                                                                                                                                                                                                                   >  1:871935/1‑170 (MQ=255)
                                                                                                                             ccAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAAttg                                                                                                                                                           <  1:1052093/289‑1 (MQ=255)
                                                                                                                                       cAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCa                                                                                                                                                                                                                                                         <  1:305826/185‑1 (MQ=255)
                                                                                                                                              aGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACaa                                                                                                                                          >  1:1318531/1‑289 (MQ=255)
                                                                                                                                               ggAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAAt                                                                                                                                         >  2:834148/1‑289 (MQ=255)
                                                                                                                                               ggAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAAt                                                                                                                                         >  1:54161/1‑289 (MQ=255)
                                                                                                                                                 aaCATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACaa                                                                                                                                          <  1:1490833/286‑1 (MQ=255)
                                                                                                                                                    aTGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAg                                                                                                                                                                                      >  1:511872/1‑239 (MQ=255)
                                                                                                                                                     tGGCGGTTTGCGCCGGCCAGGCGAGGCCGTAGAAATTATGCAGGATGCCGTAGCTGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGAACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGTATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACAt                                                                                                                                   <  2:2735162/289‑1 (MQ=255)
                                                                                                                                                     tGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACAt                                                                                                                                   <  2:1770626/289‑1 (MQ=255)
                                                                                                                                                      ggCGATTTGCGGCAGCCGGGCCAGGCCTGCGAAATTGTGCAGGATGCCGTAGCGGTTGCGAGTAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAATAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCAGTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACAt                                                                                                                                   <  2:1809184/288‑1 (MQ=255)
                                                                                                                                                      ggCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCACCGCCAAGACCTATTACAATGCCCAGACCa                                                                                                                                                                <  2:1525304/259‑1 (MQ=255)
                                                                                                                                                        cGATTTGGGCCAGCCAGGCGAGGCCGTAGAAATGTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCGGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACAt                                                                                                                                   <  2:2284963/286‑1 (MQ=255)
                                                                                                                                                                gccagccaGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAata                                                                                                                         <  1:1529913/288‑1 (MQ=255)
                                                                                                                                                                         gCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTGGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCa                                                                                                                <  2:891082/288‑1 (MQ=255)
                                                                                                                                                                          cGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCat                                                                                                               <  2:2030137/288‑1 (MQ=255)
                                                                                                                                                                           gAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCatga                                                                                                             <  1:1357440/289‑1 (MQ=255)
                                                                                                                                                                              gCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCag                                                                                                                                                                                                           >  2:1315194/1‑192 (MQ=255)
                                                                                                                                                                                           tGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGa                                                                                                                                                                                                                              >  2:1587863/1‑160 (MQ=255)
                                                                                                                                                                                           tGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGa                                                                                                                                                                                                                              <  1:1587863/160‑1 (MQ=255)
                                                                                                                                                                                                              tGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGTGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATTCCCAGACCAAATGGTTGCAGAATATCCAAAATGAACATCCAGCTAATATTGCCACCATGATTATGGCACAAAGCAATTAGGGCaagtgttaataa                                                                          >  2:1536259/1‑279 (MQ=255)
                                                                                                                                                                                                              tGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGc                                                                                                                                                       <  2:1948040/212‑1 (MQ=255)
                                                                                                                                                                                                              tGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGc                                                                                                                                                       >  1:1948040/1‑212 (MQ=255)
                                                                                                                                                                                                               gCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAg                                                                         >  1:2275949/1‑289 (MQ=255)
                                                                                                                                                                                                                 acagagtgctaTTCCCCATCAGAAAGCCGCACAGATACAACGCCAGAATACCGCTGCCTTCCAGCGCAGTAGTTAATGATAAAATCAGCATACCGCCACTTCATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCATACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGAc                                                                       <  2:1257839/279‑1 (MQ=255)
                                                                                                                                                                                                                  aaTAGGGCGAGTACCCATCAGAAAACCGCACAGATACAACGCCAAAAATCCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGACACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGAc                                                                       <  2:32722/288‑1 (MQ=255)
                                                                                                                                                                                                                   aTAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGAcc                                                                      <  2:2703493/288‑1 (MQ=255)
                                                                                                                                                                                                                        gCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCAt                                                                 <  2:2410346/288‑1 (MQ=255)
                                                                                                                                                                                                                         cGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCAt                                                                 <  2:1309391/287‑1 (MQ=255)
                                                                                                                                                                                                                          gATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTgg                                                              <  1:998893/289‑1 (MQ=255)
                                                                                                                                                                                                                            ttACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCa                                                                                                                <  2:1630737/237‑1 (MQ=255)
                                                                                                                                                                                                                               cccAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGTGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCAt                                                         <  1:175233/289‑1 (MQ=255)
                                                                                                                                                                                                                                  agcagAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCAtt                                                        >  1:1798945/1‑287 (MQ=255)
                                                                                                                                                                                                                                       aaaaCCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATAGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCg                                                 >  1:126664/1‑289 (MQ=255)
                                                                                                                                                                                                                                         aaCCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCagta                                                                                                                                                                                                         <  2:1092144/135‑1 (MQ=255)
                                                                                                                                                                                                                                              cacaGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCaa                                          >  1:2709062/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         cGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTACCGGATTCAATTTCCAGCGtc                               >  2:446680/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           ccAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGc                                                                                                                                                       <  1:681070/167‑1 (MQ=255)
                                                                                                                                                                                                                                                           ccAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGtcga                             >  2:517328/1‑286 (MQ=255)
                                                                                                                                                                                                                                                           ccAGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGtcga                             >  1:2499394/1‑286 (MQ=255)
                                                                                                                                                                                                                                                             aGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACAt                                                                                                                                   <  2:1992235/185‑1 (MQ=255)
                                                                                                                                                                                                                                                             aGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGCTGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCCTTACTGCCGGATTCAATTTCCAGCGtccac                            >  1:624248/1‑284 (MQ=255)
                                                                                                                                                                                                                                                             aGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTATGGTAATCGTCAGAAAGACCGCCAGTGGATCATTACTTCCGGATTCAATTTCCAGCGtcgaa                            >  2:432441/1‑284 (MQ=255)
                                                                                                                                                                                                                                                             aGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGtcgag                            >  1:1652076/1‑284 (MQ=255)
                                                                                                                                                                                                                                                             aGAATACCGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGA‑CTATTACAATGCCCAGACCAAATTGTTGCAGa                                                                                                                                                    <  1:1458785/167‑1 (MQ=255)
                                                                                                                                                                                                                                                                    cGCTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACAcg                    >  1:447809/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    cGCTACCTTCAAGCGAAGTAGTTAATGAGAAAATCAGACTACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACAcg                    <  2:2499394/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      cTACCTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCGGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCATCTAATATTTCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTAAGAAAGCCCGCCTTTGGATCCTTACTGCGGGATTCAATTTCACGCGTCGAGCCAacctgt                   >  2:2646919/1‑284 (MQ=255)
                                                                                                                                                                                                                                                                         ccTTCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGAc                                                                       >  2:1471733/1‑233 (MQ=255)
                                                                                                                                                                                                                                                                            tCCAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAAc                                                                                                                                     >  1:1314125/1‑168 (MQ=255)
                                                                                                                                                                                                                                                                             ccAGCGCAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCa                                                                                                                                                                                        <  2:928922/116‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  gcAGTAGTTAATGAGAAAATCCGCATACCGCCACTTAATGCCAGCAATGGAAATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCATTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGcc         <  2:1151915/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  gcAGTAGTTAATGAGAAAATCAGAATAGCGCCACTTAATGCCAGCAATGGATATGATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTGGCAGAATAGCGACAATGAACATCCAGCTAATAGTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGcc         <  2:1057509/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  gcAGTAGTTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGcc         <  1:405443/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                                    agtagtTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCGATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTa    <  2:54161/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      tagtTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTg                                                                                                                      >  2:2075689/1‑173 (MQ=255)
                                                                                                                                                                                                                                                                                      tagtTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGatcat                                                                                                  >  1:2064045/1‑193 (MQ=255)
                                                                                                                                                                                                                                                                                      tagtTAATGAGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTac   >  1:906730/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                             |||                                                                                                                                                                                                                                                                                       
ACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCAAATACGCTAAGGGGACGGGCGAAGAATATCATCCATGCGGACAAAATGAGCGCCGGAATGGCAATAGGCAGCAGATCGCTTGGGTTAACCAACAGCCCCAGCACCAGGAACATGGCGATTTGCGCCAGCCAGGCGAGGCCGTCGAAATTTTGCAGGATGCCGTAGCGGTTGCGAATAGGGCGATTACCCAGCAGAAAACCGCACAGATACACCGCCAGAATACCGCTACCTTCCAGCGCAGTAGTTAAACTGAAAATCAGAATACCGCCACTTAATGCCAGCAATGGATATAATCCGGCGGGCAGGGCGATGCGGTTGATCATTTGCAGTAGTAAATAACCGCCGCCAAGACCTATTACAATGCCCAGACCAAATTGTTGCAGAATATCGACAATGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTGCTGCCAACACGTTCGTTAAGCCCCTTACC  >  CP042583/1046874‑1047440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A