Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,047,585 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,047,5850GC99.1% 821.2 / NA 350intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  major base C (174/171);  minor base A (2/1);  total (176/174)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,047,5860CG99.7% 825.2 / NA 350intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (175/174);  total (176/174)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,047,5870TA99.7% 828.6 / NA 350intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (175/173);  minor base G (0/1);  total (176/174)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 350 total aligned reads displayed.

TGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTGCTGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGGCTCAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGAAAAACTACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCC  >  CP042583/1047305‑1047864
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                     
tGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGc                                                                                                                                                                                                                                                                                 <  2:2105237/289‑1 (MQ=255)
           cTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAACCCAGAGGTGATAAGCCAGCCCAGCGTCGCCAGCGACAGTGACGGTCGTAAc                                                                                                                                                                                                                                                                       >  2:2700536/1‑288 (MQ=255)
                    ctctCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGaa                                                                                                                                                                                                                                                             >  1:1154859/1‑289 (MQ=255)
                    ctcacgtgataCTGGATCATCGCAATAAGGGTAATCTTCAGAAAGACCGCCATGGGATCATTACTGCCGGATTCAATTTCCAGCGTACAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGaa                                                                                                                                                                                                                                                             <  2:508729/283‑1 (MQ=255)
                     tctcATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGTTAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGaa                                                                                                                                                                                                                                                             <  2:637011/288‑1 (MQ=255)
                     tctcATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGaaa                                                                                                                                                                                                                                                            >  1:1927283/1‑289 (MQ=255)
                        cATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCcaca                                                                                                                                                                                                                                                                 >  2:166152/1‑281 (MQ=255)
                         atgatgCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGaa                                                                                                                                                                                                                                                             <  2:1498889/284‑1 (MQ=255)
                              gCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGaa                                                                                                                                                                                                                                                             >  2:1212260/1‑279 (MQ=255)
                              gCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTgg                                                                                                                                                                                                                                                    >  2:220328/1‑288 (MQ=255)
                                tGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCt                                                                                                                                                                                                                                                 <  1:34297/289‑1 (MQ=255)
                                tGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCt                                                                                                                                                                                                                                                 <  2:1154859/289‑1 (MQ=255)
                                      atcGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCAAACGCCACACGAAAGGAACTGGcc                                                                                                                                                                                                                                                  <  1:1668543/282‑1 (MQ=255)
                                       tcGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCCAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCCCCAGCGACAGTCCCGGCCCTAACGCCCCACCCAAGGAACCTGCCTGAGtcc                                                                                                                                                                                                                                           >  2:1026723/1‑286 (MQ=255)
                                       tcGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAAc                                                                                                                                                                                                                                                       <  1:1518046/276‑1 (MQ=255)
                                        cGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGcc                                                                                                                                                                                                                                                  >  1:1396764/1‑280 (MQ=255)
                                        cGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGcc                                                                                                                                                                                                                                                  <  2:1396764/280‑1 (MQ=255)
                                                  gTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCccgccg                                                                                                                                                                                                                                >  1:1808630/1‑288 (MQ=255)
                                                          cAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCaaa                                                                                                                                                                                                                       >  1:1008903/1‑289 (MQ=255)
                                                           aGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCaaaa                                                                                                                                                                                                                      >  2:823017/1‑289 (MQ=255)
                                                               aGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAaataat                                                                                                                                                                                                                  <  2:1795671/289‑1 (MQ=255)
                                                                  ccGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCg                                                                                                                                                                                                                >  1:1484097/1‑288 (MQ=255)
                                                                  ccGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGc                                                                                                                                                                                                               <  1:728123/289‑1 (MQ=255)
                                                                   cGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCGAACGCCACACGAAAGGAACGGGCCTGCGGGCGCCACCCGCCGCCGAGCAAAATAATCGc                                                                                                                                                                                                               >  2:2615935/1‑288 (MQ=255)
                                                                             tCATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGt                                                                                                                                                                                                    <  1:287660/289‑1 (MQ=255)
                                                                              cATTACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGtt                                                                                                                                                                                                   <  1:971502/289‑1 (MQ=255)
                                                                                ttACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGtt                                                                                                                                                                                                   >  1:1359180/1‑287 (MQ=255)
                                                                                ttACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCCGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGtt                                                                                                                                                                                                   >  1:1034268/1‑287 (MQ=255)
                                                                                 tACTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGttact                                                                                                                                                                                                >  2:2437969/1‑289 (MQ=255)
                                                                                 tACTGCCGGATTCAAGTTCCCGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGttact                                                                                                                                                                                                <  1:1608178/289‑1 (MQ=255)
                                                                                  aCTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCaaa                                                                                                                                                                                                                       >  1:2069930/1‑265 (MQ=255)
                                                                                  aCTGCCGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCaaa                                                                                                                                                                                                                       <  2:2069930/265‑1 (MQ=255)
                                                                                      ccGGATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGGGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGCCCTGAGTGCGCAGCCCGCCGTCGTGCAAAATCATCGCCAGTGGCAAGGTACTTAccc                                                                                                                                                                                           >  2:1745675/1‑288 (MQ=255)
                                                                                        ggATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATg                                                                                                                                                                                         <  1:2094110/289‑1 (MQ=255)
                                                                                        ggATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACCTACCATg                                                                                                                                                                                         >  2:1985659/1‑289 (MQ=255)
                                                                                         gATTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGt                                                                                                                                                                                        >  1:1763070/1‑289 (MQ=255)
                                                                                          aTTCAATTTCCAGCGTCGAGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGt                                                                                                                                                                                        <  1:1220727/288‑1 (MQ=255)
                                                                                                        gtcgagcCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGt                                                                                                                                                                            <  1:609407/281‑1 (MQ=255)
                                                                                                        gtcgagcCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAAt                                                                                                                                                                         >  1:636160/6‑289 (MQ=255)
                                                                                                                 acacGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCCGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTTACAAACg                                                                                                                                                                >  2:2333876/1‑289 (MQ=255)
                                                                                                                       tcgttAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATa                                                                                                                                                           >  1:184664/1‑288 (MQ=255)
                                                                                                                                cccTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAAGTATCAAACGGGATACCGCCGACg                                                                                                                                                  >  2:703786/1‑288 (MQ=255)
                                                                                                                                   ttACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATAATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCAt                                                                                                                                              <  1:2357804/289‑1 (MQ=255)
                                                                                                                                    tACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGa                                                                                                                                                                                  >  1:2706170/1‑252 (MQ=255)
                                                                                                                                    tACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCAt                                                                                                                                              >  1:2259285/1‑288 (MQ=255)
                                                                                                                                    tACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATc                                                                                                                                             >  1:834094/1‑289 (MQ=255)
                                                                                                                                    tACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATc                                                                                                                                             >  1:187978/1‑289 (MQ=255)
                                                                                                                                           cagcagAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGGAGGGGTCATTATACAACGGGATACCGCCCACGCCATCGACt                                                                                                                                         >  2:1879133/1‑286 (MQ=255)
                                                                                                                                           cagcagAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATa                                                                                                                                                           >  1:2053504/1‑268 (MQ=255)
                                                                                                                                           cagcagAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCt                                                                                                                                      <  2:1349347/289‑1 (MQ=255)
                                                                                                                                            agcagAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAg                                                                                                                                                                                                                           >  2:2531500/1‑203 (MQ=255)
                                                                                                                                            agcagAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGcc                                                                                                                                                                                                        >  1:470693/1‑222 (MQ=255)
                                                                                                                                            agcagAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCg                                                                                                                                                                                   <  2:1823382/243‑1 (MQ=255)
                                                                                                                                            agcagAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATAccgccg                                                                                                                                                     >  2:279291/1‑273 (MQ=255)
                                                                                                                                            agcagAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCt                                                                                                                                      >  1:1903275/1‑288 (MQ=255)
                                                                                                                                                 agaAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAACGGGTAAGTATAACACGGGATACCGCCGACACCATCGACCCCTGcacgc                                                                                                                                >  2:67949/1‑285 (MQ=255)
                                                                                                                                                   aaaaGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCAt                                                                                                                              >  1:2414984/1‑289 (MQ=255)
                                                                                                                                                        aCCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGa                                                                                                                         >  1:2470300/1‑289 (MQ=255)
                                                                                                                                                                       gTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCa                                                                                                                                                                                                                         <  2:2128979/178‑1 (MQ=255)
                                                                                                                                                                       gTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCa                                                                                                                                                                                                                         >  1:2128979/1‑178 (MQ=255)
                                                                                                                                                                            gCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGcc                                                                                                                                                                                                        <  2:1606763/190‑1 (MQ=255)
                                                                                                                                                                             ccGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGaa                                                                                                                                                                                 <  2:2015897/212‑1 (MQ=255)
                                                                                                                                                                             ccGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCa                                                                                                                   <  1:2303693/274‑1 (MQ=255)
                                                                                                                                                                               gacgaTAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGGTAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATa                                                                                                  >  1:1541924/1‑289 (MQ=255)
                                                                                                                                                                                acgaTAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAgg                                                                                                                                                                                                     >  2:1671447/1‑189 (MQ=255)
                                                                                                                                                                                acgaTAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGt                                                                                                                                                                                                    <  2:468317/190‑1 (MQ=255)
                                                                                                                                                                                  gaTAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGGGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAAc                                                                                                         >  2:929405/1‑279 (MQ=255)
                                                                                                                                                                                       cgcCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGGGAAGGGGTAATTATCAAACGGGATACCGCCGACGCGACCGACTCCTGCCAGCAGGACGATCGCCAGAAAAATAAc                                                                                                         >  2:2303693/1‑274 (MQ=255)
                                                                                                                                                                                       cgcCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGcc                                                                                          >  1:1723627/1‑289 (MQ=255)
                                                                                                                                                                                            aTTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGAc                                                                                     >  1:1980941/1‑289 (MQ=255)
                                                                                                                                                                                                ataaGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGga                                                                                 <  2:2627690/289‑1 (MQ=255)
                                                                                                                                                                                                 taaGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGgaa                                                                                >  2:157956/1‑289 (MQ=255)
                                                                                                                                                                                                      cTTCAATCAAATCAAGATTAACCAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTACCGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAAc                                                                                                         <  1:1257632/259‑1 (MQ=255)
                                                                                                                                                                                                       ttCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGaaaat                                                                          >  2:2217287/1‑288 (MQ=255)
                                                                                                                                                                                                          aatcaaatcaAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGaaaatgaa                                                                       <  1:2615935/289‑5 (MQ=255)
                                                                                                                                                                                                          aatcaaatcaAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGaaaatgaa                                                                       <  1:41702/289‑5 (MQ=255)
                                                                                                                                                                                                          aatcaaatcaAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGaaaatgaa                                                                       <  1:2203768/289‑5 (MQ=255)
                                                                                                                                                                                                            tcaaatcaaGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGaaaatgaact                                                                     <  1:1579606/289‑7 (MQ=255)
                                                                                                                                                                                                            tcaaatcaaGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGaaaatgaact                                                                     <  1:1331345/289‑7 (MQ=255)
                                                                                                                                                                                                            tcaaatcaaGATTAAACAGCCACGCCGCCATAATGCCGGTTAATCCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACTAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGaaaatgaact                                                                     <  1:1288254/289‑7 (MQ=255)
                                                                                                                                                                                                            acaaatcacGACTAAACACACACGCCGCAATCATGCCGGTTAAGCCAGAGGAGTTAAGGAAGCCCAGCGTCGCCGGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGaaaatgaact                                                                     <  2:2709062/288‑7 (MQ=255)
                                                                                                                                                                                                               aatcaaGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCAAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAg                                                                                                                                                                                                      >  2:1271543/1‑157 (MQ=255)
                                                                                                                                                                                                               aatcaaGATTAAACAGCCACGCCACCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAAc                                                                                                         >  2:750893/1‑250 (MQ=255)
                                                                                                                                                                                                               aatcaaGATTAAACAGCCACGCCACCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAAc                                                                                                         <  1:750893/250‑1 (MQ=255)
                                                                                                                                                                                                                          aaCAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAAc                                                                                                                                                                                                                                                       <  1:679601/97‑1 (MQ=255)
                                                                                                                                                                                                                          aaCAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGt                                                                                                                                                                                        >  1:259693/1‑160 (MQ=255)
                                                                                                                                                                                                                               ccACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGc                                                                                                                                                                                                                                                   >  2:335725/1‑96 (MQ=255)
                                                                                                                                                                                                                               ccACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAAAAGGAATGACAAGAAGGGAAGAAAAGGAACTAAAGAAAATACTGCAGGTg                                                  >  2:1328137/1‑289 (MQ=255)
                                                                                                                                                                                                                                cACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGAAAATAAACTAAGGAATATACTGCTgggt                                                  >  2:1425475/1‑286 (MQ=255)
                                                                                                                                                                                                                                 aCGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGAc                                                <  2:1927283/289‑1 (MQ=255)
                                                                                                                                                                                                                                       acacacatccagTTAGACCAGAGGTGATAAGCACCCCAAGAGTCGCCAGGGACAGTGCCGGTCCTACCACCACGCGAAATGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGAAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAggat                                          <  2:2164923/278‑1 (MQ=255)
                                                                                                                                                                                                                                                  gTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGGCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACAGATGGGTACAAGGAAGGAACCGaaag                               >  2:585666/1‑287 (MQ=255)
                                                                                                                                                                                                                                                    tAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATg                             >  2:392991/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            agGTGATAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTa                                                                                                                                                                           <  2:1047238/139‑1 (MQ=255)
                                                                                                                                                                                                                                                             agTGATAAGCACGCCCAGGGGCGCCAGCGACAGTGCGTGTCCTAACGCCACACGAAAGGAACTGGCATGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGACAGGTTACTTACCATGTAGGCGAAGGCGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAAGAACCAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCt                     <  1:1631692/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                 aTAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGaaa                                                                            <  1:1988554/229‑1 (MQ=255)
                                                                                                                                                                                                                                                                 aTAAGCACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAatta                >  1:1109783/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      cACGCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTAttgtt           >  1:2674006/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         gCCCAGCGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTtgtg        >  1:578384/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                               cGTCGCCAGCGACAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGAAAATGAACTAAg                                                                  <  2:1900892/225‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                     
TGAACATCCAGCTAATATTGCTCTCATGATGCTGGATCATCGCAATTAGGGTAATCGTCAGAAAGACCGCCATTGGATCATTACTGCCGGATTCAATTTCCAGCGTGCTGCCAACACGTTCGTTAAGCCCCTTACCACCCAGCAGAGAAAAGACCGCTGCAGCATCGGTAGAGCCGACGATAGCGCCGATTAATAAGCCTTCAATCAAATCAAGATTAAACAGCCACGCCGCCATCATGCCGGTTAAACCAGAGGTGATAAGCACGCCCAGCGTCGCCAGGCTCAGTGCCGGTCCTAACGCCACACGAAAGGAACTGGCCTGAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGCCGACGCCATCGACTCCTGCCAGCATGCCGATCGCCAGAAAAATAACCAGAATAGGAATGCCAAGACGGGAAGAAAAACTACTAAGTAATATACTGCTGGTGACAAGGATGGATCCTAAGATGAAAAGGCTAATTATTGTTGTGGCATCC  >  CP042583/1047305‑1047864

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A