Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,265,885 |
A→G |
S13G (AGC→GGC) |
yeiR → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,265,885 | 0 | A | G | 99.5%
| 624.6
/ ‑5.0
| 202 | S13G (AGC→GGC) | yeiR | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (101/99); total (102/100) |
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.94e-01 |
Only 100 of 223 total aligned reads displayed.
TTTTTTAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCAGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTC > NC_000913/2265795‑2265974
|
tttttAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGgcggcg > 2:6706834/1‑93 (MQ=255)
ttttAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTcggcggcgg < 1:904336/93‑1 (MQ=255)
ttAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGa < 1:6463809/93‑1 (MQ=255)
tAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCgggga > 2:3188657/1‑91 (MQ=255)
cAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGACAAcc > 2:2527465/1‑93 (MQ=255)
cAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAAcc > 2:3040743/1‑93 (MQ=255)
ggATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGGAAACCAc > 2:1630536/1‑93 (MQ=255)
aaTTACCGCTCAGTTACTTTACAAGAGTATTGCGGAGCCGTTGCGACCAGGACCACCCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACg < 2:7099020/92‑1 (MQ=255)
aTTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGt < 2:2979518/93‑1 (MQ=255)
aaCGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGa < 1:7692382/93‑1 (MQ=255)
aCGCTCAGTTACCTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCTCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAt < 1:1046597/93‑1 (MQ=255)
aCGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAt < 1:4533605/93‑1 (MQ=255)
aCGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAt < 1:3608474/93‑1 (MQ=255)
cGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAtt > 1:7531161/1‑93 (MQ=255)
cGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAtt < 2:1124410/93‑1 (MQ=255)
cGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAtt > 2:1418710/1‑93 (MQ=255)
cGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAtt > 2:3378103/1‑93 (MQ=255)
cGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAtt > 2:5474269/1‑93 (MQ=255)
gCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAttc < 2:867836/93‑1 (MQ=255)
gCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAttc > 2:4554336/1‑93 (MQ=255)
cTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAttct > 1:4332025/1‑93 (MQ=255)
tCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAttctt > 1:7835126/1‑93 (MQ=255)
tCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAttctt > 1:5474383/1‑93 (MQ=255)
atttAACTAACCAGAGTTTGGCGGAGCCGTTGTGCCCAGGCCCACCCTCATCCCCGTTTTTCGCGGCGGGGGAAAACCCACGTCGATTCTTCa < 2:7005292/91‑1 (MQ=255)
aGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCa < 2:2743811/93‑1 (MQ=255)
gTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCAt < 1:3388181/93‑1 (MQ=255)
ttAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATc < 2:3890194/93‑1 (MQ=255)
ttAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATc > 1:2100499/1‑93 (MQ=255)
tAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCt < 1:5054665/93‑1 (MQ=255)
ttACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTa < 1:791401/93‑1 (MQ=255)
aCCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGGGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGc < 1:186446/93‑1 (MQ=255)
aCCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACTACGTCGATTCTTCATCTGTTAGc > 2:4308332/1‑93 (MQ=255)
ccAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGcc > 2:2801068/1‑93 (MQ=255)
ccAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGcc > 2:4010887/1‑93 (MQ=255)
cAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGccc > 1:2866877/1‑93 (MQ=255)
cAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGccc > 1:3855789/1‑93 (MQ=255)
cAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGccc > 1:6044591/1‑93 (MQ=255)
cAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGcac > 2:3838471/1‑91 (MQ=255)
cAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAAACACGTCGATTCTTCATCTGTTAGccc > 2:5669119/1‑93 (MQ=255)
agagTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCa > 2:1253024/1‑93 (MQ=255)
aagTTTTGGGGAGCCGTTGTGCCCAGGACCACCCGCATCACCGGTTTTCTCGGCGGCGGAAAAACCACGTCGATTCTTCATCTGTTAGCCCAt < 1:1436098/92‑1 (MQ=255)
agTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCCCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATa < 1:6362830/93‑1 (MQ=255)
agTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATa > 1:4722505/1‑93 (MQ=255)
tATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATaaa > 2:7240894/1‑93 (MQ=255)
tATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATaaa > 2:6628832/1‑93 (MQ=255)
aTTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAg < 1:3923964/93‑1 (MQ=255)
aTTGAGGACCCGCTGTGACCAGGCCCAACCTGATCTCCGGTTTGCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAg < 2:3506193/93‑1 (MQ=255)
ttGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGa > 1:3918954/1‑93 (MQ=255)
gCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATc < 1:6641203/93‑1 (MQ=255)
gCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATc < 2:6677551/93‑1 (MQ=255)
cGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATcc < 1:172648/93‑1 (MQ=255)
cGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATcc > 2:5180905/1‑93 (MQ=255)
gAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCa > 2:6415667/1‑93 (MQ=255)
gAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCa > 2:5694522/1‑93 (MQ=255)
aGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCaa < 1:7390832/93‑1 (MQ=255)
gCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAAc > 2:6179545/1‑93 (MQ=255)
gTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCGCAACGaa > 1:2973269/1‑93 (MQ=255)
gTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGaa > 2:1472694/1‑93 (MQ=255)
gTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGaa < 1:3464067/93‑1 (MQ=255)
gTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGaa > 2:7603879/1‑93 (MQ=255)
ttGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCCACGaaa > 2:2243296/1‑93 (MQ=255)
ttGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGaaa > 2:2843828/1‑93 (MQ=255)
ttGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGaaa > 2:6947447/1‑93 (MQ=255)
gtgGCCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGaaaaa < 2:5939529/93‑1 (MQ=255)
gACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATg < 2:5508676/93‑1 (MQ=255)
gACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATg > 2:4154604/1‑93 (MQ=255)
aCCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATgg > 1:4196916/1‑93 (MQ=255)
aCCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATgg < 1:2310440/93‑1 (MQ=255)
cAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGc > 1:2354055/1‑93 (MQ=255)
cAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGc > 2:1699607/1‑93 (MQ=255)
cAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGc > 2:1191202/1‑93 (MQ=255)
ggACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCgg < 2:5288644/93‑1 (MQ=255)
ggACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCgg < 1:3996937/93‑1 (MQ=255)
gACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGt < 1:1233329/93‑1 (MQ=255)
ccACCCTCACCACCGTTTTTCTCGGCGGCGGAAAACCCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTAc < 2:6938553/93‑1 (MQ=255)
cAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACt < 2:2041538/93‑1 (MQ=255)
aaCCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTg < 1:2932105/93‑1 (MQ=255)
aaCCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTg > 1:6167195/1‑93 (MQ=255)
ccTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGt < 2:4641943/93‑1 (MQ=255)
ccTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGt < 2:7214384/93‑1 (MQ=255)
tcatcaCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTa > 2:4409330/1‑93 (MQ=255)
tcatcaCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTa > 1:1272555/1‑93 (MQ=255)
catcaCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTaa > 1:5712289/1‑93 (MQ=255)
tcaCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATg < 2:1768178/93‑1 (MQ=255)
caCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGa < 1:513739/93‑1 (MQ=255)
aCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGaa < 1:3054389/93‑1 (MQ=255)
aCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGaa > 2:7894276/1‑93 (MQ=255)
aCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGaa < 2:642009/93‑1 (MQ=255)
cgggTTTCCGCGGCGGCGGAAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAAt < 1:6935536/91‑1 (MQ=255)
ggTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAAttt < 1:5381852/93‑1 (MQ=255)
gTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAACAATGGGCGGTACTGGTTAATGAATTTg > 1:3407665/1‑93 (MQ=255)
ttttCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTgg < 2:7422247/93‑1 (MQ=255)
ttttCTCGGCCGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTgg > 1:7187060/1‑93 (MQ=255)
ttCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTgggg > 1:3240910/1‑93 (MQ=255)
ttCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTgggg < 1:609187/93‑1 (MQ=255)
tctcGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGa < 1:7299494/93‑1 (MQ=255)
ctcGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGaa < 2:2349528/93‑1 (MQ=255)
ctcGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGaa < 1:6715625/93‑1 (MQ=255)
cggcggcggGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGt < 1:4973669/93‑1 (MQ=255)
cggcggcggGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGATACTGGTTAATGAATTTGGGGAAGt < 2:4796860/93‑1 (MQ=255)
|
TTTTTTAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCAGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTC > NC_000913/2265795‑2265974
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCTTTTTTAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCAGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTCGGAA > NC_000913/2265792‑2265978
|
GCCTTTTTTAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCG < SRR4302543.5366500/94‑1 (MQ=60)
CTTTTTTAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGCAGCCGTTGTGACCAGGACAAACCTCATCACCGGTTTTCTCTGCGGC > SRR4302543.4082642/1‑94 (MQ=60)
TTTTAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGG < SRR4302543.912299/94‑1 (MQ=60)
TTAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAA < SRR4302543.7375754/94‑1 (MQ=60)
TTAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAA < SRR4302543.6524708/94‑1 (MQ=60)
GCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAAC < SRR4302543.4136098/94‑1 (MQ=60)
CCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACC < SRR4302543.2998144/94‑1 (MQ=60)
CAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCA > SRR4302543.188540/1‑94 (MQ=60)
AGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCAC < SRR4302543.5121440/94‑1 (MQ=60)
GGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACG > SRR4302543.3668813/1‑94 (MQ=60)
ATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCccccc > SRR4302543.2827481/1‑89 (MQ=60)
ATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTC < SRR4302543.3258415/94‑1 (MQ=60)
ATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTC < SRR4302543.6357737/94‑1 (MQ=60)
TTAACGCTTAGTTATCTCACCAGAGTATTGCGGAGCCTTGGTGACCAGGACCAACCTAACCCCCGTTTTTCTGGGGGGCGGGAAAACCACGTCG < SRR4302543.5874910/94‑1 (MQ=23)
TTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCG > SRR4302543.3898975/1‑94 (MQ=60)
TTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCG < SRR4302543.6557164/94‑1 (MQ=60)
AACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAT < SRR4302543.7765211/94‑1 (MQ=60)
ACGCTCAGTTACCTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCTCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATT < SRR4302543.1055968/94‑1 (MQ=60)
ACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATT > SRR4302543.7602987/1‑94 (MQ=60)
ACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATT < SRR4302543.4574875/94‑1 (MQ=60)
ACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATT > SRR4302543.7602988/1‑94 (MQ=60)
ACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATT < SRR4302543.3640311/94‑1 (MQ=60)
CGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTC > SRR4302543.4655918/1‑94 (MQ=60)
CGCTCAGTTAACTTACCAGAGTATTGCCGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGTTAAACCACGTCGATTC > SRR4302543.557587/1‑94 (MQ=60)
GCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCT > SRR4302543.4371332/1‑94 (MQ=60)
CTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTT > SRR4302543.5523989/1‑94 (MQ=60)
CTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTT > SRR4302543.7908883/1‑94 (MQ=60)
CTCAGTTAACTTACCAGAGTATGGCGGAGCCGTTGCGACCAGGACCAACCTCATCTCCGGTTTTCTCGGCGGCGGGAAAGCCACGTCGATTCTT < SRR4302543.3693347/94‑1 (MQ=60)
AGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCAT > SRR4302543.1275456/1‑94 (MQ=60)
GTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATT > SRR4302543.5814668/1‑94 (MQ=60)
GTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATC > SRR4302543.989172/1‑94 (MQ=60)
GTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATC < SRR4302543.3418557/94‑1 (MQ=60)
GTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATC > SRR4302543.2119290/1‑94 (MQ=60)
TTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCT < SRR4302543.3577154/94‑1 (MQ=60)
TAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTG < SRR4302543.5100619/94‑1 (MQ=60)
TAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTG < SRR4302543.2349873/94‑1 (MQ=60)
CTTACCAGAGTATCGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTA < SRR4302543.1308921/94‑1 (MQ=60)
TTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCACCCTCATCACCGGTTTTCTCGGCGGCGGGAAACCCACGTCGATTCTTCATCTGTTAG < SRR4302543.7004587/94‑1 (MQ=60)
TTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAG < SRR4302543.798357/94‑1 (MQ=60)
TTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAG < SRR4302543.6251079/94‑1 (MQ=60)
TTAACAAAGTATTGCGGAGACGTTGTGACCAGGACCACCCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAG < SRR4302543.798112/94‑1 (MQ=60)
TACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGC < SRR4302543.3971672/94‑1 (MQ=60)
ACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGGGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCC < SRR4302543.188030/94‑1 (MQ=60)
ACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCC > SRR4302543.4275730/1‑94 (MQ=60)
CCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCC > SRR4302543.3889858/1‑94 (MQ=60)
CCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCC > SRR4302543.2893002/1‑94 (MQ=60)
CCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCC > SRR4302543.6101810/1‑94 (MQ=60)
CCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCC > SRR4302543.7656378/1‑94 (MQ=60)
CAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCAGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCA < SRR4302543.7734897/94‑1 (MQ=60)
aagttttggGGAGCCGTTGTGCCCAGGACCACCCGCATCACCGGTTTTCTCGGCGGCGGAAAAACCACGTCGATTCTTCATCTGTTAGCCCATA < SRR4302543.1449081/85‑1 (MQ=60)
GAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATA > SRR4302543.4765652/1‑94 (MQ=60)
AGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCCCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAA < SRR4302543.6422661/94‑1 (MQ=60)
TATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAG < SRR4302543.3279899/94‑1 (MQ=60)
TTTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGA < SRR4302543.3958594/94‑1 (MQ=60)
ATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGA > SRR4302543.6157336/1‑94 (MQ=60)
ATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGA > SRR4302543.2782414/1‑94 (MQ=60)
ATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGA < SRR4302543.3958595/94‑1 (MQ=60)
ATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGA > SRR4302543.3953539/1‑94 (MQ=60)
ATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGA < SRR4302543.848755/94‑1 (MQ=60)
GCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCC < SRR4302543.6703876/94‑1 (MQ=60)
CGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCC < SRR4302543.174123/94‑1 (MQ=60)
AGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAAC < SRR4302543.7461827/94‑1 (MQ=60)
CCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGA > SRR4302543.3280863/1‑94 (MQ=60)
CGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCGCAACGAA > SRR4302543.3000265/1‑94 (MQ=60)
GTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAA < SRR4302543.3495093/94‑1 (MQ=60)
TGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATG < SRR4302543.4895799/94‑1 (MQ=60)
GACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGG > SRR4302543.507478/1‑94 (MQ=60)
GACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGG > SRR4302543.4234965/1‑94 (MQ=60)
ACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGG < SRR4302543.6992543/94‑1 (MQ=60)
ACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGG < SRR4302543.2331467/94‑1 (MQ=60)
CCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGG > SRR4302543.6123146/1‑94 (MQ=60)
CCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGC > SRR4302543.2375404/1‑94 (MQ=60)
CAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCG > SRR4302543.2715702/1‑94 (MQ=60)
GGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGT < SRR4302543.4032561/94‑1 (MQ=60)
GACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTA < SRR4302543.1244438/94‑1 (MQ=60)
GACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTA > SRR4302543.4449467/1‑94 (MQ=60)
CCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACT < SRR4302543.1571202/94‑1 (MQ=60)
CAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTG > SRR4302543.6225548/1‑94 (MQ=60)
CAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTG < SRR4302543.6445018/94‑1 (MQ=60)
AACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGG < SRR4302543.2958730/94‑1 (MQ=60)
AACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGG < SRR4302543.7903303/94‑1 (MQ=60)
CTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTA > SRR4302543.1283924/1‑94 (MQ=60)
CTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTA < SRR4302543.2331329/94‑1 (MQ=60)
CTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTA > SRR4302543.3021501/1‑94 (MQ=60)
CTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTA < SRR4302543.1880085/94‑1 (MQ=60)
TCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAA > SRR4302543.5764404/1‑94 (MQ=60)
CATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAAT < SRR4302543.960934/94‑1 (MQ=60)
ATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATG > SRR4302543.6769821/1‑94 (MQ=60)
ATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATG < SRR4302543.5340221/94‑1 (MQ=60)
CACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAA > SRR4302543.5658645/1‑94 (MQ=60)
CACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAA < SRR4302543.518516/94‑1 (MQ=60)
ACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAAT < SRR4302543.870614/94‑1 (MQ=60)
ACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAAT > SRR4302543.349434/1‑94 (MQ=60)
ACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAAT < SRR4302543.3081894/94‑1 (MQ=60)
CGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTT < SRR4302543.1795012/94‑1 (MQ=60)
CGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTT < SRR4302543.3427838/94‑1 (MQ=60)
GGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAACAATGGGCGGTACTGGTTAATGAATTTG > SRR4302543.3438176/1‑94 (MQ=60)
GGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTG < SRR4302543.5498070/94‑1 (MQ=60)
GGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTG < SRR4302543.5430686/94‑1 (MQ=60)
GTTTTCTCGGCCGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGG > SRR4302543.7256781/1‑94 (MQ=60)
TTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGG > SRR4302543.3270224/1‑94 (MQ=60)
TTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGA < SRR4302543.614754/94‑1 (MQ=60)
TCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAA < SRR4302543.7369905/94‑1 (MQ=60)
TCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAA < SRR4302543.5078935/94‑1 (MQ=60)
TTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAG < SRR4302543.1236225/94‑1 (MQ=60)
CTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAG > SRR4302543.2895895/1‑94 (MQ=60)
CTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAG < SRR4302543.7366986/94‑1 (MQ=60)
CTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAG < SRR4302543.6779094/94‑1 (MQ=60)
CGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTC < SRR4302543.5018942/94‑1 (MQ=60)
GCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTCGG < SRR4302543.4848776/94‑1 (MQ=60)
GCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTCGG < SRR4302543.2506891/94‑1 (MQ=60)
GGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTCGGAA < SRR4302543.952849/94‑1 (MQ=60)
|
GCCTTTTTTAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCAGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTCGGAA > NC_000913/2265792‑2265978
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
