Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,125,339 C→T D46N (GAT→AAT)  yiiX ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,125,3390CT99.2% 1323.5 / ‑3.6 368D46N (GAT→AAT) yiiXhypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (1/2);  new base T (187/177);  total (188/180)
Fisher's exact test for biased strand distribution p-value = 6.15e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 374 total aligned reads displayed.

GCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGG  >  NC_000913/4125249‑4125428
                                                                                          |                                                                                         
  ttGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTa                                                                                       >  1:5938929/1‑93 (MQ=255)
  ttGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTa                                                                                       <  1:2236493/93‑1 (MQ=255)
  ttGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTa                                                                                       <  2:1934897/93‑1 (MQ=255)
  ttGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTa                                                                                       <  2:2511001/93‑1 (MQ=255)
  ttGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTa                                                                                       <  2:4087744/93‑1 (MQ=255)
  ttGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTa                                                                                       >  1:335682/1‑93 (MQ=255)
   tGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTAt                                                                                      <  1:4809422/93‑1 (MQ=255)
   tGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTAt                                                                                      <  2:816334/93‑1 (MQ=255)
   tGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTAt                                                                                      <  1:242741/93‑1 (MQ=255)
   tGAGCGGGGGGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTAt                                                                                      <  2:4376830/93‑1 (MQ=255)
    gAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATg                                                                                     <  2:6940923/93‑1 (MQ=255)
     aGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATgg                                                                                    <  1:7358921/93‑1 (MQ=255)
     aGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATgg                                                                                    <  2:6383952/93‑1 (MQ=255)
       cGGGGTGTATTCCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGt                                                                                  <  2:585343/93‑1 (MQ=255)
        ggggTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTc                                                                                 >  1:1329847/1‑93 (MQ=255)
          ggTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGc                                                                               >  1:1023761/1‑93 (MQ=255)
          ggTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGc                                                                               <  2:5712907/93‑1 (MQ=255)
           gtgtATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGcc                                                                              >  2:1701439/1‑93 (MQ=255)
           gtgtATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGcc                                                                              >  2:1472231/1‑93 (MQ=255)
            tgtATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCa                                                                             >  1:400499/1‑93 (MQ=255)
              tATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGt                                                                           >  1:4410105/1‑93 (MQ=255)
              tATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGt                                                                           >  1:78528/1‑93 (MQ=255)
              tATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGt                                                                           >  1:4661074/1‑93 (MQ=255)
              tATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGt                                                                           >  1:5745420/1‑93 (MQ=255)
               aTTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGtt                                                                          <  2:942498/93‑1 (MQ=255)
                tttCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTg                                                                         >  2:4645436/1‑93 (MQ=255)
                   cACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCTAGTTGGAt                                                                      <  2:7635848/93‑1 (MQ=255)
                   cACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGAt                                                                      >  2:3035210/1‑93 (MQ=255)
                   cACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGAt                                                                      <  2:968576/93‑1 (MQ=255)
                      cGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGc                                                                   <  2:5349697/93‑1 (MQ=255)
                        ggCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCtt                                                                 >  1:5307916/1‑93 (MQ=255)
                        ggCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCtt                                                                 >  2:724356/1‑93 (MQ=255)
                         gCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCttt                                                                >  1:7908465/1‑93 (MQ=255)
                          ccGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTa                                                               <  2:2827533/93‑1 (MQ=255)
                            gACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACt                                                             >  2:5208480/1‑93 (MQ=255)
                             aCTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACtt                                                            <  2:1998543/93‑1 (MQ=255)
                               tGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTg                                                          <  1:7605794/93‑1 (MQ=255)
                                gCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCGCCGGCATTCCGGTGTGGCTATAATTGGTATGGATCGCCAGTTGGATCGCTTTACTTTGc                                                         <  2:7023282/93‑1 (MQ=255)
                                gCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGTGTCGCCAGTTGGATCGCTTTACTTTGc                                                         >  1:6654986/1‑93 (MQ=255)
                                gCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGc                                                         >  2:4599070/1‑93 (MQ=255)
                                gCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGc                                                         >  2:7301002/1‑93 (MQ=255)
                                  ttCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGa                                                       >  2:4452525/1‑93 (MQ=255)
                                  ttCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGa                                                       <  1:6395125/93‑1 (MQ=255)
                                  ttCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGa                                                       >  2:6700552/1‑93 (MQ=255)
                                    cAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGCGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATg                                                     >  1:559450/1‑93 (MQ=255)
                                     aaaaaCGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGa                                                    <  2:3459474/93‑1 (MQ=255)
                                      aaaaCGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAg                                                   <  2:1623119/93‑1 (MQ=255)
                                      aaaaCGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAg                                                   <  2:7445891/93‑1 (MQ=255)
                                       aaaCGTAGTGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGc                                                  <  2:4791798/93‑1 (MQ=255)
                                       aaaCGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGc                                                  <  2:2254883/93‑1 (MQ=255)
                                           gTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCgaga                                              <  1:4587510/93‑1 (MQ=255)
                                           gTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCgaga                                              >  1:472865/1‑93 (MQ=255)
                                           gTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCgaga                                              >  1:6306966/1‑93 (MQ=255)
                                            tAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCgagag                                             >  1:5217629/1‑93 (MQ=255)
                                             aGGGTTTTTTGTTGCGTATCCCCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCgagaga                                            <  2:493120/93‑1 (MQ=255)
                                              gggCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGAt                                           >  1:251298/1‑93 (MQ=255)
                                              gggCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGAt                                           <  2:2666356/93‑1 (MQ=255)
                                               ggCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATc                                          <  1:2766961/93‑1 (MQ=255)
                                               ggCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATc                                          <  1:3722465/93‑1 (MQ=255)
                                                gCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCt                                         >  1:2323026/1‑93 (MQ=255)
                                                 cTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTg                                        <  2:7902845/93‑1 (MQ=255)
                                                  tttttGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGa                                       >  2:5584117/1‑93 (MQ=255)
                                                  tttttGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGa                                       >  1:1668755/1‑93 (MQ=255)
                                                   ttttGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGaa                                      >  2:3845241/1‑93 (MQ=255)
                                                     ttgttgCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAg                                    >  1:5417483/1‑93 (MQ=255)
                                                       gttgCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGCTCGCTTTACTCTGCGATGAGCGAGAGATCTGAAAgat                                  >  2:6975434/1‑93 (MQ=255)
                                                       gttgCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAgat                                  <  1:3507747/93‑1 (MQ=255)
                                                        ttgCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAgatg                                 >  1:2941973/1‑93 (MQ=255)
                                                        ttgCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAgatg                                 <  1:983125/93‑1 (MQ=255)
                                                           cGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGatgatg                              <  2:6249318/93‑1 (MQ=255)
                                                            gTATCACCAGCATACCGGTGTTTCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGt                             >  1:1412939/1‑93 (MQ=255)
                                                            gTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGt                             >  1:6969644/1‑93 (MQ=255)
                                                             tATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTc                            <  2:2362434/93‑1 (MQ=255)
                                                                 aCCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCg                        <  1:1925065/93‑1 (MQ=255)
                                                                  ccAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCgg                       <  2:1217432/93‑1 (MQ=255)
                                                                  ccAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCgg                       >  1:6783533/1‑93 (MQ=255)
                                                                   cAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGt                      >  2:6557399/1‑93 (MQ=255)
                                                                   cAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGt                      >  1:3043058/1‑93 (MQ=255)
                                                                    aGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGtt                     >  1:3857488/1‑93 (MQ=255)
                                                                    aGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGtt                     >  1:6046327/1‑93 (MQ=255)
                                                                    aGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGtt                     <  2:6582007/93‑1 (MQ=255)
                                                                       aTACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTtgt                  >  1:7160508/1‑93 (MQ=255)
                                                                        tACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTtgtg                 >  1:4922608/1‑93 (MQ=255)
                                                                        tACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTtgtg                 >  2:1904871/1‑93 (MQ=255)
                                                                        tACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTtgtg                 >  2:3648155/1‑93 (MQ=255)
                                                                          ccGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGc               <  1:6212274/93‑1 (MQ=255)
                                                                          ccGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGc               <  1:1236268/93‑1 (MQ=255)
                                                                             gtgtGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGc            >  2:5478197/1‑93 (MQ=255)
                                                                              tgtgGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGcc           >  1:2530649/1‑93 (MQ=255)
                                                                              tgtgGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGcc           >  1:660759/1‑93 (MQ=255)
                                                                                tgGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAg         >  1:1141756/1‑93 (MQ=255)
                                                                                tgGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAg         >  2:6108584/1‑93 (MQ=255)
                                                                                tgGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAg         >  2:3153945/1‑93 (MQ=255)
                                                                                tgGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAg         >  2:3331519/1‑93 (MQ=255)
                                                                                   cTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCa      >  1:7416887/1‑93 (MQ=255)
                                                                                   cTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCa      >  2:5010870/1‑93 (MQ=255)
                                                                                    tataATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCaa     >  1:1807359/1‑93 (MQ=255)
                                                                                    tataATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCaa     >  2:6906697/1‑93 (MQ=255)
                                                                                     ataATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCaaa    >  1:4186227/1‑93 (MQ=255)
                                                                                       aaTTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAgg  <  2:667754/93‑1 (MQ=255)
                                                                                          |                                                                                         
GCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGG  >  NC_000913/4125249‑4125428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGG  >  NC_000913/4125246‑4125432
                                                                                             |                                                                                             
ACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATT                                                                                               >  SRR4302543.796912/1‑94 (MQ=60)
ACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATT                                                                                               >  SRR4302543.7782187/1‑94 (MQ=60)
 CTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTG                                                                                              >  SRR4302543.653283/1‑94 (MQ=60)
 CTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTG                                                                                              <  SRR4302543.3597688/94‑1 (MQ=60)
  TGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGG                                                                                             >  SRR4302543.6875376/1‑94 (MQ=60)
  TGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGG                                                                                             >  SRR4302543.530053/1‑94 (MQ=60)
  TGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGG                                                                                             <  SRR4302543.4583270/94‑1 (MQ=60)
  TGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAAGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGG                                                                                             <  SRR4302543.94901/94‑1 (MQ=60)
    CTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTA                                                                                           >  SRR4302543.338765/1‑94 (MQ=60)
    CTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTA                                                                                           >  SRR4302543.5993266/1‑94 (MQ=60)
    CTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTG                                                                                           >  SRR4302543.6070382/1‑94 (MQ=60)
     gttggctGGGTGTATTTCACCGGGCCGACTGCTACAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTAT                                                                                          <  SRR4302543.2657561/87‑1 (MQ=60)
     TTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTAT                                                                                          <  SRR4302543.2256733/94‑1 (MQ=60)
     TTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTAT                                                                                          >  SRR4302543.6372738/1‑94 (MQ=60)
     TTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTAT                                                                                          <  SRR4302543.3661908/94‑1 (MQ=60)
     TTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTAT                                                                                          >  SRR4302543.3852077/1‑94 (MQ=60)
     TTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTAT                                                                                          >  SRR4302543.4713757/1‑94 (MQ=60)
      TGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATG                                                                                         <  SRR4302543.1792781/94‑1 (MQ=60)
      TGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATG                                                                                         <  SRR4302543.4853345/94‑1 (MQ=60)
      TGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATG                                                                                         <  SRR4302543.244845/94‑1 (MQ=60)
       GAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGG                                                                                        >  SRR4302543.1738136/1‑94 (MQ=60)
       GAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGG                                                                                        <  SRR4302543.5742548/94‑1 (MQ=60)
        AGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGG                                                                                       <  SRR4302543.7429699/94‑1 (MQ=60)
         GCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGT                                                                                      <  SRR4302543.137971/94‑1 (MQ=60)
          CGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTC                                                                                     >  SRR4302543.1341702/1‑94 (MQ=60)
           GGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCG                                                                                    >  SRR4302543.4812737/1‑94 (MQ=60)
           GGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCG                                                                                    <  SRR4302543.12086/94‑1 (MQ=60)
            GGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGC                                                                                   >  SRR4302543.1032822/1‑94 (MQ=60)
             GGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCC                                                                                  >  SRR4302543.3839025/1‑94 (MQ=60)
              GTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCA                                                                                 >  SRR4302543.4359690/1‑94 (MQ=60)
              GTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCA                                                                                 >  SRR4302543.404194/1‑94 (MQ=60)
              GTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCA                                                                                 >  SRR4302543.7477338/1‑94 (MQ=60)
              GTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTATGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCA                                                                                 >  SRR4302543.2993565/1‑94 (MQ=60)
               TGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGTCAG                                                                                <  SRR4302543.4735731/94‑1 (MQ=60)
                GTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGT                                                                               >  SRR4302543.4450078/1‑94 (MQ=60)
                GTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGT                                                                               >  SRR4302543.5797791/1‑94 (MQ=60)
                GTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGT                                                                               >  SRR4302543.4703533/1‑94 (MQ=60)
                GTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGT                                                                               >  SRR4302543.79262/1‑94 (MQ=60)
                GTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACAGGTGTGGCTATAATTGGTATGGGTCGCCAGT                                                                               >  SRR4302543.4703532/1‑94 (MQ=60)
                  ATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTG                                                                             >  SRR4302543.300586/1‑94 (MQ=60)
                  ATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTG                                                                             >  SRR4302543.2792133/1‑94 (MQ=60)
                   TTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGG                                                                            <  SRR4302543.3949610/94‑1 (MQ=60)
                   TTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGG                                                                            >  SRR4302543.7691463/1‑94 (MQ=60)
                     TCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGAT                                                                          >  SRR4302543.1547725/1‑94 (MQ=60)
                      CACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATC                                                                         >  SRR4302543.7166837/1‑94 (MQ=60)
                       CCCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCG                                                                        <  SRR4302543.1567948/94‑1 (MQ=60)
                         CGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCT                                                                      >  SRR4302543.4651433/1‑94 (MQ=60)
                         CGGGCGACTGCTTCAAAAACGTAGGGCGTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTT                                                                     <  SRR4302543.2447363/94‑1 (MQ=60)
                          GGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTT                                                                     >  SRR4302543.5355854/1‑94 (MQ=60)
                           GGCCGACTGCTTCAAAAACGTATTGCTTTTTGTTGCGTATCACCAGCATACCTGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTT                                                                    >  SRR4302543.1404752/1‑94 (MQ=60)
                           GGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTT                                                                    >  SRR4302543.4749874/1‑94 (MQ=60)
                           GGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTT                                                                    >  SRR4302543.7982773/1‑94 (MQ=60)
                            GCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTA                                                                   <  SRR4302543.7934108/94‑1 (MQ=60)
                             CCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTAC                                                                  <  SRR4302543.5812943/94‑1 (MQ=60)
                              CGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGTGTCGCCAGTTGGATCGCTTTACT                                                                 >  SRR4302543.3635984/1‑94 (MQ=60)
                              CGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACT                                                                 >  SRR4302543.6296372/1‑94 (MQ=60)
                              CGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACT                                                                 <  SRR4302543.6762642/94‑1 (MQ=60)
                              CGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACT                                                                 >  SRR4302543.2821730/1‑94 (MQ=60)
                               GACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTT                                                                >  SRR4302543.7252791/1‑94 (MQ=60)
                               GACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGGGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTT                                                                <  SRR4302543.971090/94‑1 (MQ=60)
                                ACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTT                                                               <  SRR4302543.4195342/94‑1 (MQ=60)
                                 CTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCATCAGCATACCGGCGTGGCTATTATTGGTATGGGTCGtttgttggttcgcttaattttg                                                              >  SRR4302543.6072018/1‑72 (MQ=60)
                                 CTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTG                                                              <  SRR4302543.6404569/94‑1 (MQ=60)
                                 CTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTG                                                              <  SRR4302543.3621927/94‑1 (MQ=60)
                                  TGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGTGTCGCCAGTTGGATCGCTTTACTTTGC                                                             >  SRR4302543.6717816/1‑94 (MQ=60)
                                  TGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGC                                                             <  SRR4302543.7678012/94‑1 (MQ=60)
                                  TGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGC                                                             >  SRR4302543.6514415/1‑94 (MQ=60)
                                     TTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGAT                                                          <  SRR4302543.7198725/94‑1 (MQ=60)
                                     TTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGAT                                                          <  SRR4302543.1304836/94‑1 (MQ=60)
                                     TTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGAT                                                          <  SRR4302543.6455325/94‑1 (MQ=60)
                                     TTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGAT                                                          <  SRR4302543.2039772/94‑1 (MQ=60)
                                      TCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATG                                                         <  SRR4302543.1197643/94‑1 (MQ=60)
                                      TCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATG                                                         >  SRR4302543.7553539/1‑94 (MQ=60)
                                      TCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGCGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATG                                                         >  SRR4302543.564577/1‑94 (MQ=60)
                                       CAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGA                                                        <  SRR4302543.5587572/94‑1 (MQ=60)
                                        AAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAG                                                       <  SRR4302543.2549575/94‑1 (MQ=60)
                                         AAAACGTAGGGCTTTTTGTTGCGTATCCCCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGC                                                      <  SRR4302543.5438580/94‑1 (MQ=60)
                                         AAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGC                                                      >  SRR4302543.2539224/1‑94 (MQ=60)
                                         AAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGC                                                      >  SRR4302543.1867791/1‑94 (MQ=60)
                                         AAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGC                                                      >  SRR4302543.7180566/1‑94 (MQ=60)
                                         AAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGC                                                      <  SRR4302543.4535045/94‑1 (MQ=60)
                                            ACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAG                                                   <  SRR4302543.6337016/94‑1 (MQ=60)
                                            ACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAG                                                   <  SRR4302543.2369267/94‑1 (MQ=60)
                                            ACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAG                                                   >  SRR4302543.6953469/1‑94 (MQ=60)
                                             CGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGA                                                  >  SRR4302543.6366289/1‑94 (MQ=60)
                                             CGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGA                                                  >  SRR4302543.477241/1‑94 (MQ=60)
                                              GTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAG                                                 <  SRR4302543.7936360/94‑1 (MQ=60)
                                              GTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAG                                                 <  SRR4302543.4629183/94‑1 (MQ=60)
                                              GTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAG                                                 >  SRR4302543.5264627/1‑94 (MQ=60)
                                              GTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAG                                                 >  SRR4302543.5344029/1‑94 (MQ=60)
                                               TAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGA                                                <  SRR4302543.112850/94‑1 (MQ=60)
                                               TAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGA                                                >  SRR4302543.3038976/1‑94 (MQ=60)
                                               TAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGA                                                >  SRR4302543.6541843/1‑94 (MQ=60)
                                                AGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTGCTTTGCGATGAGCGAGAGAT                                               >  SRR4302543.2486305/1‑94 (MQ=60)
                                                AGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGAT                                               <  SRR4302543.4884261/94‑1 (MQ=60)
                                                AGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGAT                                               >  SRR4302543.2486309/1‑94 (MQ=60)
                                                AGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGAT                                               >  SRR4302543.253484/1‑94 (MQ=60)
                                                AGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGAT                                               >  SRR4302543.5888661/1‑94 (MQ=60)
                                                 GGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATC                                              <  SRR4302543.2467370/94‑1 (MQ=60)
                                                 GGGCTTTTTGTTGCGTATCACCAGCAGACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATC                                              <  SRR4302543.2426800/94‑1 (MQ=60)
                                                  GGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCT                                             <  SRR4302543.3803876/94‑1 (MQ=60)
                                                  GGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCT                                             >  SRR4302543.2344136/1‑94 (MQ=60)
                                                  GGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCT                                             <  SRR4302543.2792141/94‑1 (MQ=60)
                                                  GGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCT                                             >  SRR4302543.4165306/1‑94 (MQ=60)
                                                  GGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCT                                             <  SRR4302543.3501484/94‑1 (MQ=60)
                                                  GGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCT                                             <  SRR4302543.3755201/94‑1 (MQ=60)
                                                    CTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGA                                           >  SRR4302543.1683706/1‑94 (MQ=60)
                                                    CTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGA                                           >  SRR4302543.1303343/1‑94 (MQ=60)
                                                    CTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGA                                           >  SRR4302543.3301919/1‑94 (MQ=60)
                                                    CTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGTCGCTTTACTTTTCGATGAGCGAGAGATCTGAA                                          >  SRR4302543.5106742/1‑94 (MQ=60)
                                                     TTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAA                                          >  SRR4302543.679902/1‑94 (MQ=60)
                                                       TTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAG                                        <  SRR4302543.1005898/94‑1 (MQ=60)
                                                       TTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAG                                        >  SRR4302543.5466759/1‑94 (MQ=60)
                                                         TGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGAT                                      <  SRR4302543.4821197/94‑1 (MQ=60)
                                                         TGTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGAT                                      >  SRR4302543.5597678/1‑94 (MQ=60)
                                                          GTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATG                                     <  SRR4302543.7469548/94‑1 (MQ=60)
                                                          GTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATG                                     >  SRR4302543.2968685/1‑94 (MQ=60)
                                                          GTTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATG                                     <  SRR4302543.3539101/94‑1 (MQ=60)
                                                           TTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGA                                    <  SRR4302543.4236978/94‑1 (MQ=60)
                                                           TTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGA                                    <  SRR4302543.991804/94‑1 (MQ=60)
                                                           TTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGA                                    >  SRR4302543.2856156/1‑94 (MQ=60)
                                                           TTGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGA                                    <  SRR4302543.4534547/94‑1 (MQ=60)
                                                            ttcgtctccCCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATGGCTTTACTTTGCGGTGAGCGAGAGATCTGAAAGATGAT                                   <  SRR4302543.2275083/85‑1 (MQ=60)
                                                            TGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGAT                                   <  SRR4302543.1876428/94‑1 (MQ=60)
                                                            TGCGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGAT                                   <  SRR4302543.5107898/94‑1 (MQ=60)
                                                            TGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGAT                                   <  SRR4302543.2275082/94‑1 (MQ=60)
                                                              CGTATCACCAGCATACCGGTGTTTCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGT                                 >  SRR4302543.1425715/1‑94 (MQ=60)
                                                              CGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGT                                 >  SRR4302543.7035230/1‑94 (MQ=60)
                                                              CGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGT                                 >  SRR4302543.322805/1‑94 (MQ=60)
                                                              CGTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGT                                 >  SRR4302543.259286/1‑94 (MQ=60)
                                                               GTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGCTCGCGTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTC                                >  SRR4302543.6443579/1‑94 (MQ=60)
                                                               GTATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTC                                <  SRR4302543.2890569/94‑1 (MQ=60)
                                                                TATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCG                               >  SRR4302543.6532945/1‑94 (MQ=60)
                                                                TATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCG                               <  SRR4302543.5357359/94‑1 (MQ=60)
                                                                TATCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCG                               <  SRR4302543.5091446/94‑1 (MQ=60)
                                                                TATCACCAGCATACCGGTGTGGCTATAATGGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCG                               <  SRR4302543.5357360/94‑1 (MQ=60)
                                                                  TCACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCC                             <  SRR4302543.3472563/94‑1 (MQ=60)
                                                                   CACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCG                            >  SRR4302543.5892614/1‑94 (MQ=60)
                                                                   CACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCG                            >  SRR4302543.4104315/1‑94 (MQ=60)
                                                                    ACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGG                           >  SRR4302543.6847596/1‑94 (MQ=60)
                                                                    ACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGG                           <  SRR4302543.5706307/94‑1 (MQ=60)
                                                                    ACCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGG                           <  SRR4302543.1942412/94‑1 (MQ=60)
                                                                     CCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGT                          >  SRR4302543.1579622/1‑94 (MQ=60)
                                                                     CCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGT                          >  SRR4302543.3070496/1‑94 (MQ=60)
                                                                     CCAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGT                          >  SRR4302543.4255935/1‑94 (MQ=60)
                                                                      CAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTT                         >  SRR4302543.6103559/1‑94 (MQ=60)
                                                                      CAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTT                         >  SRR4302543.3891567/1‑94 (MQ=60)
                                                                      CAGCATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTT                         >  SRR4302543.3891566/1‑94 (MQ=60)
                                                                         CATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGT                      >  SRR4302543.7230081/1‑94 (MQ=60)
                                                                         CATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGT                      <  SRR4302543.579768/94‑1 (MQ=60)
                                                                          ATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTG                     >  SRR4302543.4967456/1‑94 (MQ=60)
                                                                          ATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTG                     >  SRR4302543.7710834/1‑94 (MQ=60)
                                                                          ATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTG                     >  SRR4302543.1182714/1‑94 (MQ=60)
                                                                          ATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTG                     >  SRR4302543.3422913/1‑94 (MQ=60)
                                                                          ATACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTG                     >  SRR4302543.6052670/1‑94 (MQ=60)
                                                                           TACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGG                    <  SRR4302543.6274776/94‑1 (MQ=60)
                                                                            ACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGC                   <  SRR4302543.4816363/94‑1 (MQ=60)
                                                                            ACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGC                   >  SRR4302543.2117658/1‑94 (MQ=60)
                                                                            ACCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGC                   >  SRR4302543.1861398/1‑94 (MQ=60)
                                                                             CCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTGCTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCT                  <  SRR4302543.1104317/94‑1 (MQ=60)
                                                                             CCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCT                  <  SRR4302543.1247396/94‑1 (MQ=60)
                                                                             CCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCT                  <  SRR4302543.6270930/94‑1 (MQ=60)
                                                                             CCGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCT                  <  SRR4302543.2314637/94‑1 (MQ=60)
                                                                              CGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTG                 >  SRR4302543.6140675/1‑94 (MQ=60)
                                                                              CGGTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTG                 >  SRR4302543.7995065/1‑94 (MQ=60)
                                                                                GTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCC               >  SRR4302543.666830/1‑94 (MQ=60)
                                                                                GTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCC               >  SRR4302543.666831/1‑94 (MQ=60)
                                                                                GTGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCC               >  SRR4302543.2553679/1‑94 (MQ=60)
                                                                                 TGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCA              >  SRR4302543.7985004/1‑94 (MQ=60)
                                                                                 TGTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCA              <  SRR4302543.7478998/94‑1 (MQ=60)
                                                                                  GTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAG             >  SRR4302543.1152157/1‑94 (MQ=60)
                                                                                  GTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAG             >  SRR4302543.7498453/1‑94 (MQ=60)
                                                                                  GTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAG             >  SRR4302543.6173775/1‑94 (MQ=60)
                                                                                  GTGGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGACAG             >  SRR4302543.7498452/1‑94 (MQ=60)
                                                                                    GGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGC           <  SRR4302543.4509104/94‑1 (MQ=60)
                                                                                    GGCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGC           <  SRR4302543.6720656/94‑1 (MQ=60)
                                                                                     GCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCA          >  SRR4302543.7488037/1‑94 (MQ=60)
                                                                                     GCTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCA          <  SRR4302543.4905633/94‑1 (MQ=60)
                                                                                      CTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAA         >  SRR4302543.1823539/1‑94 (MQ=60)
                                                                                      CTATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAA         <  SRR4302543.7884749/94‑1 (MQ=60)
                                                                                       TATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAA        >  SRR4302543.131527/1‑94 (MQ=60)
                                                                                       TATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAA        >  SRR4302543.4224180/1‑94 (MQ=60)
                                                                                       TATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAA        <  SRR4302543.2620978/94‑1 (MQ=60)
                                                                                       TATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGACAGGCAAA        >  SRR4302543.7303255/1‑94 (MQ=60)
                                                                                        ATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAG       >  SRR4302543.1747946/1‑94 (MQ=60)
                                                                                        ATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAG       <  SRR4302543.5290242/94‑1 (MQ=60)
                                                                                        ATAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAG       <  SRR4302543.6896498/94‑1 (MQ=60)
                                                                                         TAATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGG      <  SRR4302543.6686647/94‑1 (MQ=60)
                                                                                          AATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGC     >  SRR4302543.6958300/1‑94 (MQ=60)
                                                                                           ATTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCA    >  SRR4302543.904943/1‑94 (MQ=60)
                                                                                            TTGGTATGGGTCGCCAGTTGGATCGCTTTTCTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAG   <  SRR4302543.6091793/94‑1 (MQ=60)
                                                                                            TTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAG   <  SRR4302543.1873621/94‑1 (MQ=60)
                                                                                            TTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAG   <  SRR4302543.3367458/94‑1 (MQ=60)
                                                                                            TTGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAG   >  SRR4302543.1479046/1‑94 (MQ=60)
                                                                                             TGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGG  <  SRR4302543.2535936/94‑1 (MQ=60)
                                                                                             TGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGG  >  SRR4302543.2386630/1‑94 (MQ=60)
                                                                                             TGGTATGGGTCGCCAGTTGGATCGCTTTACCTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGG  <  SRR4302543.2061705/94‑1 (MQ=60)
                                                                                             |                                                                                             
ACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGG  >  NC_000913/4125246‑4125432

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: