Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,125,604 |
G→A |
intergenic (‑130/+54) |
yiiX ← / ← metJ |
hypothetical protein/MetJ |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,125,604 | 0 | G | A | 100.0%
| 837.9
/ NA
| 234 | intergenic (‑130/+54) | yiiX/metJ | hypothetical protein/MetJ |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (121/113); total (121/113) |
Only 100 of 241 total aligned reads displayed.
AACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGGCCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCTC > NC_000913/4125514‑4125693
|
aCGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCt < 1:2948718/93‑1 (MQ=255)
aCGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCt > 1:4508632/1‑93 (MQ=255)
cGTGCTCGGTGTTTATGCCGGATGCGGCGTGAACATCTTATCGGGCCTGCAACGTTGTGCAAATTCAATAAATTGCAATATGACGTAGACCTg > 2:1604329/1‑93 (MQ=18)
gTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGa < 1:3648711/93‑1 (MQ=255)
gTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGa > 1:1975218/1‑93 (MQ=255)
tGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGAt < 2:1057139/93‑1 (MQ=255)
gCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATa < 2:4178522/93‑1 (MQ=255)
cTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATaa < 2:3439399/93‑1 (MQ=255)
tCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAg < 1:412240/93‑1 (MQ=255)
tCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAg < 1:1160172/93‑1 (MQ=255)
cGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAgg > 2:1544857/1‑92 (MQ=255)
cGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGc < 1:2092915/93‑1 (MQ=255)
cGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGc < 1:2747515/93‑1 (MQ=255)
gttgttTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCg < 2:1433130/93‑1 (MQ=255)
ttgttTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGt > 1:2838787/1‑93 (MQ=255)
tgttTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTa < 1:2002859/93‑1 (MQ=255)
tgttTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTa < 1:2106176/93‑1 (MQ=255)
tgttTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTa < 2:3399829/93‑1 (MQ=255)
gttTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAg > 1:1501220/1‑93 (MQ=255)
tttATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAgc < 1:172468/93‑1 (MQ=255)
ttATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAgcg > 1:1336826/1‑93 (MQ=255)
aTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCa < 1:371957/93‑1 (MQ=255)
tccGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATc < 1:123404/92‑1 (MQ=255)
gCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATc < 1:927061/93‑1 (MQ=255)
cGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAg < 1:3237737/93‑1 (MQ=255)
ggATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAgg < 2:3159759/93‑1 (MQ=255)
gATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGc > 1:3075745/1‑93 (MQ=255)
gcggcgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGAt > 1:2578540/1‑93 (MQ=255)
cggcgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGAtt < 2:3894976/93‑1 (MQ=255)
ggcgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTc < 2:2737311/93‑1 (MQ=255)
ggcgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTc > 1:1401750/1‑93 (MQ=255)
ggcgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTc < 1:774240/93‑1 (MQ=255)
gcgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTcc < 1:104194/93‑1 (MQ=255)
cgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCa < 2:4217719/93‑1 (MQ=255)
cgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCa < 1:3457443/93‑1 (MQ=255)
gTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCAc > 2:2884270/1‑93 (MQ=255)
tGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCagt > 1:245250/1‑91 (MQ=255)
gAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTc < 1:4358009/93‑1 (MQ=255)
gAACCCCTTATCCGGCATACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTc < 2:3539552/93‑1 (MQ=255)
aaCGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTcc < 2:3654415/93‑1 (MQ=255)
aaCGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTcc > 1:4173580/1‑93 (MQ=255)
aCGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCcg < 1:691694/93‑1 (MQ=255)
cTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGcgcc > 1:4474857/1‑93 (MQ=255)
cTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGAGCATCAGGCGAATCCACTCCGcgcc > 1:2503806/1‑93 (MQ=255)
ttATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGcgccg > 1:4440459/1‑93 (MQ=255)
tATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGcgccgc < 2:3671022/93‑1 (MQ=255)
tCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGctc > 1:2620516/1‑93 (MQ=255)
ccGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGctct < 1:1214959/93‑1 (MQ=255)
ccGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGctct < 2:1302599/93‑1 (MQ=255)
gCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCtttt > 2:4031683/1‑93 (MQ=255)
ccTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCttttt < 2:1414174/93‑1 (MQ=255)
cTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCtttttt > 1:3383886/1‑93 (MQ=255)
cAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCt > 2:839303/1‑93 (MQ=255)
aaGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCtt < 1:4035048/93‑1 (MQ=255)
aaGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCtt < 1:1577448/93‑1 (MQ=255)
gTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTa > 2:4640559/1‑93 (MQ=255)
gTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTa > 1:2678158/1‑93 (MQ=255)
cGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTa < 1:3304478/93‑1 (MQ=255)
gTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTAt < 2:2854894/93‑1 (MQ=255)
gTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTAt > 1:2862830/1‑93 (MQ=255)
tGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTAtt > 2:1957497/1‑93 (MQ=255)
tGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGGAGCGCATCAGTCGGTGCCGCTGCGCTTGGCTCTGTTGTGCTTTAGTAtt > 2:2069252/1‑93 (MQ=16)
aaTTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCa > 2:3992289/1‑93 (MQ=255)
ttCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACg > 2:3528065/1‑93 (MQ=255)
cAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTCGCATTGCCACGtc > 2:121900/1‑93 (MQ=37)
cAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtc < 1:3991214/93‑1 (MQ=255)
cAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtc > 2:2213/1‑93 (MQ=255)
cAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtc < 1:2733290/93‑1 (MQ=255)
cAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtc < 1:3784477/93‑1 (MQ=255)
aaTAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtct > 1:593641/1‑93 (MQ=255)
aaTAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtct > 1:891954/1‑93 (MQ=255)
aTAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtctc > 1:3945879/1‑93 (MQ=255)
aTAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtctc > 1:3888887/1‑93 (MQ=255)
aTAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtctc > 2:4123304/1‑93 (MQ=255)
aTAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtctc < 2:3693274/93‑1 (MQ=255)
aTAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtctc > 1:2211494/1‑93 (MQ=255)
tAAATTGCCATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTcc > 2:4577034/1‑93 (MQ=255)
tAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGACTCCACTCCGCGCCGCTCTATCTTGTCTTAGTATTCCCACGTCTcc > 1:4685846/1‑93 (MQ=37)
aaaTTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCg > 1:4228442/1‑93 (MQ=255)
aaaTTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCg > 1:1020122/1‑93 (MQ=255)
aTTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCggg < 1:3131970/93‑1 (MQ=255)
ttGCAATATGACGTAGATCTGATAAGCGTAGCGCATCAGGCGATTCCCCTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGt < 2:4534095/93‑1 (MQ=255)
ttGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGt > 2:1844744/1‑93 (MQ=255)
ttGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGt > 2:468101/1‑93 (MQ=255)
ttGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGt < 2:2562453/93‑1 (MQ=255)
tGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGtt > 2:652368/1‑93 (MQ=255)
cAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTaa < 1:1657294/93‑1 (MQ=255)
cAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTaa < 1:230727/93‑1 (MQ=255)
aaTATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAAt < 1:1666933/93‑1 (MQ=255)
aaTATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAAt > 2:1313607/1‑93 (MQ=255)
aaTATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAAt > 1:1456593/1‑93 (MQ=255)
atatGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCCCTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATc < 1:3583008/93‑1 (MQ=255)
atatGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATc > 1:2775359/1‑93 (MQ=255)
atatGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATc > 2:428821/1‑93 (MQ=255)
atatGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATc > 2:4439503/1‑93 (MQ=255)
atatGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATc < 2:3210038/93‑1 (MQ=255)
tatGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATcc > 1:2075678/1‑93 (MQ=255)
tatGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATcc > 1:323268/1‑93 (MQ=255)
tAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCAtctc > 2:2606135/1‑93 (MQ=255)
tAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCAtctc > 2:3223109/1‑93 (MQ=255)
|
AACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGGCCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCTC > NC_000913/4125514‑4125693
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGGCCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCTCACGC > NC_000913/4125511‑4125697
|
GACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGA > SRR4302535.1206031/1‑94 (MQ=60)
ACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGAC < SRR4302535.649170/94‑1 (MQ=60)
CAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCACATTCAATAAATTGCAATATGACGTAGACC > SRR4302535.1999220/1‑94 (MQ=60)
CAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACC > SRR4302535.451347/1‑94 (MQ=60)
CAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACC > SRR4302535.4164575/1‑94 (MQ=60)
CAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACC < SRR4302535.4025576/94‑1 (MQ=60)
AACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCT > SRR4302535.4539571/1‑94 (MQ=60)
AACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCT > SRR4302535.3706729/1‑94 (MQ=60)
ACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTG < SRR4302535.2969434/94‑1 (MQ=60)
ACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTG < SRR4302535.3885797/94‑1 (MQ=60)
CGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGA > SRR4302535.1989445/1‑94 (MQ=60)
CGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGA > SRR4302535.863730/1‑94 (MQ=60)
GTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATCTGACGTAGACCTGAT > SRR4302535.2819928/1‑94 (MQ=60)
GTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGAT < SRR4302535.3673976/94‑1 (MQ=60)
TGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATA > SRR4302535.4062653/1‑94 (MQ=60)
CTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAG > SRR4302535.4518690/1‑94 (MQ=60)
CTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAG > SRR4302535.2869307/1‑94 (MQ=60)
TCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGC < SRR4302535.415137/94‑1 (MQ=60)
TCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGC < SRR4302535.1168466/94‑1 (MQ=60)
CGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCG < SRR4302535.2108000/94‑1 (MQ=60)
CGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCG < SRR4302535.2767100/94‑1 (MQ=60)
CGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCG > SRR4302535.1956140/1‑94 (MQ=60)
GTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGT > SRR4302535.2858926/1‑94 (MQ=60)
TGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAG < SRR4302535.2121369/94‑1 (MQ=60)
TGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAG < SRR4302535.2017291/94‑1 (MQ=60)
TGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAG > SRR4302535.1512019/1‑94 (MQ=60)
TGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAG < SRR4302535.1675151/94‑1 (MQ=60)
GTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGC > SRR4302535.417658/1‑94 (MQ=60)
TTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCG < SRR4302535.1570021/94‑1 (MQ=60)
TTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCG > SRR4302535.1346363/1‑94 (MQ=60)
TTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCG < SRR4302535.173663/94‑1 (MQ=60)
ATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCAT < SRR4302535.374530/94‑1 (MQ=60)
TGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATC < SRR4302535.566560/94‑1 (MQ=60)
TCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCA < SRR4302535.124271/94‑1 (MQ=60)
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCA < SRR4302535.933627/94‑1 (MQ=60)
CGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGG < SRR4302535.3260214/94‑1 (MQ=60)
CGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGG < SRR4302535.21827/94‑1 (MQ=60)
CGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGG > SRR4302535.344954/1‑94 (MQ=60)
CGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGG > SRR4302535.163442/1‑94 (MQ=60)
GGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGC > SRR4302535.3097206/1‑94 (MQ=60)
GATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCG < SRR4302535.620335/94‑1 (MQ=60)
ATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGA > SRR4302535.3105094/1‑94 (MQ=60)
TGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGAT > SRR4302535.2597068/1‑94 (MQ=60)
GCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATT < SRR4302535.2103994/94‑1 (MQ=60)
GCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATT < SRR4302535.2763314/94‑1 (MQ=60)
CGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTC > SRR4302535.1411755/1‑94 (MQ=60)
GGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCC > SRR4302535.930245/1‑94 (MQ=60)
GGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCC < SRR4302535.779687/94‑1 (MQ=60)
GCGTGATCGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCA < SRR4302535.395806/94‑1 (MQ=60)
GCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCA < SRR4302535.1468867/94‑1 (MQ=60)
GCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCA < SRR4302535.104937/94‑1 (MQ=60)
GCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCA > SRR4302535.371570/1‑94 (MQ=60)
CGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCAC < SRR4302535.1650393/94‑1 (MQ=60)
CGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCAC < SRR4302535.3481479/94‑1 (MQ=60)
GTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCAGT > SRR4302535.246930/1‑94 (MQ=60)
GAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCC < SRR4302535.4387844/94‑1 (MQ=60)
GAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCC > SRR4302535.3652793/1‑94 (MQ=60)
GAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCC < SRR4302535.1241716/94‑1 (MQ=60)
GAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCC > SRR4302535.4202147/1‑94 (MQ=60)
AACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCG < SRR4302535.742444/94‑1 (MQ=60)
AACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCG < SRR4302535.1954285/94‑1 (MQ=60)
ACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGC < SRR4302535.696542/94‑1 (MQ=60)
CGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCG > SRR4302535.3256573/1‑94 (MQ=60)
GCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGC < SRR4302535.2281592/94‑1 (MQ=60)
CCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCC > SRR4302535.4505562/1‑94 (MQ=60)
CCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCC > SRR4302535.4009412/1‑94 (MQ=60)
CCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCC < SRR4302535.1490616/94‑1 (MQ=60)
CCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGAGCATCAGGCGAATCCACTCCGCGCC > SRR4302535.2521857/1‑94 (MQ=60)
CTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCG > SRR4302535.4470897/1‑94 (MQ=60)
ATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTC > SRR4302535.2639303/1‑94 (MQ=60)
ATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTC > SRR4302535.2506548/1‑94 (MQ=60)
CCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTT > SRR4302535.10471/1‑94 (MQ=60)
CCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTT < SRR4302535.1092706/94‑1 (MQ=60)
CCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTT < SRR4302535.1223672/94‑1 (MQ=60)
CGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTT > SRR4302535.3130413/1‑94 (MQ=60)
CGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTT < SRR4302535.4432406/94‑1 (MQ=60)
GGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTT < SRR4302535.3371493/94‑1 (MQ=60)
GCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTT < SRR4302535.3840078/94‑1 (MQ=60)
GCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTT < SRR4302535.2019262/94‑1 (MQ=60)
GCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTT < SRR4302535.4017680/94‑1 (MQ=60)
CCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTT > SRR4302535.3407408/1‑94 (MQ=60)
CCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTT > SRR4302535.1704442/1‑94 (MQ=60)
CTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTG > SRR4302535.2781128/1‑94 (MQ=60)
CTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTG > SRR4302535.2714546/1‑94 (MQ=60)
CAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTT < SRR4302535.3503638/94‑1 (MQ=60)
CAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTT > SRR4302535.1424302/1‑94 (MQ=60)
CAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTT > SRR4302535.2055996/1‑94 (MQ=60)
AAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTT > SRR4302535.2568883/1‑94 (MQ=60)
AAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTT < SRR4302535.4062672/94‑1 (MQ=60)
AAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTT < SRR4302535.1588831/94‑1 (MQ=60)
AGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTA > SRR4302535.2697319/1‑94 (MQ=60)
AGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTA < SRR4302535.126618/94‑1 (MQ=60)
AGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTA > SRR4302535.2565278/1‑94 (MQ=60)
GTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAG > SRR4302535.836752/1‑94 (MQ=60)
TTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGT > SRR4302535.2728793/1‑94 (MQ=60)
CGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTAT < SRR4302535.2140553/94‑1 (MQ=60)
CGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTAT > SRR4302535.2883113/1‑94 (MQ=60)
CGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTAT < SRR4302535.3327466/94‑1 (MQ=60)
TGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTC < SRR4302535.4221780/94‑1 (MQ=60)
TGAAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTC < SRR4302535.2418387/94‑1 (MQ=60)
GCAAATTCAATAAATTGCAATATGACGTAGACCTGATAGGCGTAGCGCATCAGGCGATTCCTCTCCGCGCCGCTCTTTTTTGCTTTAGTATTCC < SRR4302535.3496182/94‑1 (MQ=60)
CAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCC < SRR4302535.4098728/94‑1 (MQ=60)
AAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCA > SRR4302535.2692924/1‑94 (MQ=60)
AAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCA > SRR4302535.557985/1‑94 (MQ=60)
AATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCAC > SRR4302535.1173459/1‑94 (MQ=60)
ATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACG > SRR4302535.1346337/1‑94 (MQ=60)
ATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACG > SRR4302535.2115991/1‑94 (MQ=60)
TTTAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGT > SRR4302535.3789236/1‑94 (MQ=60)
CAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCT < SRR4302535.3810587/94‑1 (MQ=60)
CAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCT > SRR4302535.597803/1‑94 (MQ=60)
CAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCT > SRR4302535.4500171/1‑94 (MQ=60)
CAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCT < SRR4302535.2752797/94‑1 (MQ=60)
CAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCT > SRR4302535.898274/1‑94 (MQ=60)
CAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCT < SRR4302535.4018512/94‑1 (MQ=60)
CAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCT < SRR4302535.1362973/94‑1 (MQ=60)
AATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTC < SRR4302535.4293961/94‑1 (MQ=60)
AATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTC > SRR4302535.3972825/1‑94 (MQ=60)
AATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTC > SRR4302535.2227247/1‑94 (MQ=60)
AATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTC > SRR4302535.3915555/1‑94 (MQ=60)
ATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGACTCCACTCCGCGCCGCTCTATCTTGTCTTAGTATTCCCACGTCTCC > SRR4302535.4717582/1‑94 (MQ=60)
TAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCG > SRR4302535.4257380/1‑94 (MQ=60)
TAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCG > SRR4302535.1027369/1‑94 (MQ=60)
AAATTGCAACATCACGTAGACCTGATAAGCGTAGCGCATGAGGCGATTCCGCTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGG < SRR4302535.2620384/94‑1 (MQ=60)
AATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGG > SRR4302535.4316575/1‑94 (MQ=60)
AATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGG < SRR4302535.2942475/94‑1 (MQ=60)
ATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGT < SRR4302535.3153781/94‑1 (MQ=60)
CAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAAT < SRR4302535.1669278/94‑1 (MQ=60)
CAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAAT > SRR4302535.2906587/1‑94 (MQ=60)
CAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAAT > SRR4302535.1467018/1‑94 (MQ=60)
CAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAAT < SRR4302535.232318/94‑1 (MQ=60)
AATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATC < SRR4302535.1678993/94‑1 (MQ=60)
AATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATC > SRR4302535.2795119/1‑94 (MQ=60)
AATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATC > SRR4302535.328549/1‑94 (MQ=60)
ATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCCCTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCC < SRR4302535.3607860/94‑1 (MQ=60)
ATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCC > SRR4302535.2090630/1‑94 (MQ=60)
ATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCC > SRR4302535.2794118/1‑94 (MQ=60)
ATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCC > SRR4302535.325502/1‑94 (MQ=60)
ATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGCTAATCC > SRR4302535.3299552/1‑94 (MQ=60)
CGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCT > SRR4302535.3462604/1‑94 (MQ=60)
CGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCT < SRR4302535.4680826/94‑1 (MQ=60)
CGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCT > SRR4302535.3073530/1‑94 (MQ=60)
CGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCT > SRR4302535.1220865/1‑94 (MQ=60)
GTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCTC > SRR4302535.2455096/1‑94 (MQ=60)
GTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCTC > SRR4302535.3236494/1‑94 (MQ=60)
AGACCTGATAAGCGTAGCGCATCAGGTGATTTCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCTCAC < SRR4302535.1210143/94‑1 (MQ=60)
AGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCTCAC > SRR4302535.1209847/1‑94 (MQ=60)
ACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCTCACGC < SRR4302535.3783038/94‑1 (MQ=60)
ACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCTCACGC > SRR4302535.1893451/1‑94 (MQ=60)
|
GACAACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGGCCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCTCACGC > NC_000913/4125511‑4125697
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
