Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,596,967 |
A→G |
L409L (TTA→CTA) |
ydeV ← |
putative kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,596,967 | 0 | A | G | 99.7%
| 1012.6
/ ‑5.4
| 308 | L409L (TTA→CTA) | ydeV | putative kinase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (177/130); total (178/130) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 313 total aligned reads displayed.
TGACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAACGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAACA > NC_000913/1596877‑1597056
|
gACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGa < 2:5895864/93‑1 (MQ=255)
gACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGa > 2:7226324/1‑93 (MQ=255)
gACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGa < 1:9027521/93‑1 (MQ=255)
gACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGa > 1:4671833/1‑93 (MQ=255)
gACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGa < 2:349401/93‑1 (MQ=255)
accaccGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGAt > 1:8520012/1‑93 (MQ=255)
accaccGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGAt < 2:1786644/93‑1 (MQ=255)
caccGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGa < 1:1819993/93‑1 (MQ=255)
ccGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAg < 1:1497507/93‑1 (MQ=255)
cGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAgg > 1:2708502/1‑93 (MQ=255)
cGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAgg < 1:9408033/93‑1 (MQ=255)
cGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAgg > 2:1666685/1‑93 (MQ=255)
aaTATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATg < 1:5513472/93‑1 (MQ=255)
atatTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGa < 1:1058158/93‑1 (MQ=255)
atatTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGa < 2:1268381/93‑1 (MQ=255)
tatTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGaa < 1:8049537/93‑1 (MQ=255)
ttGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAata < 2:7783915/93‑1 (MQ=255)
tGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAatat > 2:8138195/1‑93 (MQ=255)
tGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAatat > 2:646395/1‑93 (MQ=255)
gACGGGTAATCCCGAGACATCAGCGAGAATTTCACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATAtt < 1:2192802/93‑1 (MQ=255)
aCGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTc < 1:7428980/93‑1 (MQ=255)
aCGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTc > 1:9192550/1‑93 (MQ=255)
gggTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCga < 1:5036642/93‑1 (MQ=255)
gTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCgaga > 1:3378324/1‑93 (MQ=255)
tAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGaa < 2:3622246/93‑1 (MQ=255)
tAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCACCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGaa > 2:2285675/1‑93 (MQ=255)
aTCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAAt > 1:4156918/1‑93 (MQ=255)
aTCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAAt > 1:9758505/1‑93 (MQ=255)
aTCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAAt > 1:7326806/1‑93 (MQ=255)
tCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATc > 2:3799076/1‑93 (MQ=255)
acccGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATc < 1:776404/92‑1 (MQ=255)
cccGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCa > 1:9328549/1‑93 (MQ=255)
cGAGACATCAGCGAGAATTTGACTTCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGc < 1:8185477/93‑1 (MQ=255)
gagaCATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCa > 2:4948244/1‑93 (MQ=255)
gagaCATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCa > 2:8839768/1‑93 (MQ=255)
agaCATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCaa > 1:3115282/1‑93 (MQ=255)
agaCATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCaa > 2:2887900/1‑93 (MQ=255)
cATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAAttt < 2:9292536/93‑1 (MQ=255)
aTCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTtg < 1:9928485/93‑1 (MQ=255)
tCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCGATTtgc > 2:2732442/1‑93 (MQ=255)
tCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTtgc > 2:327238/1‑93 (MQ=255)
tCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTtgc > 1:4106314/1‑93 (MQ=255)
cAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTtgct < 2:9496695/93‑1 (MQ=255)
cAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTtgct < 2:4271767/93‑1 (MQ=255)
aGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTtgctg > 2:6614890/1‑93 (MQ=255)
cGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCa < 1:3932803/93‑1 (MQ=255)
gagaATTTTACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCaa > 1:6650595/1‑93 (MQ=255)
agaATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAg > 2:7670909/1‑93 (MQ=255)
agaATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAg > 1:3208841/1‑93 (MQ=255)
aTTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTa < 1:4962020/93‑1 (MQ=255)
aTTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTa > 2:4104680/1‑93 (MQ=255)
aTTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTa > 2:6176741/1‑93 (MQ=255)
tttGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTac > 2:4657611/1‑93 (MQ=255)
tttGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTac > 1:6887369/1‑93 (MQ=255)
ttGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTaca < 2:4785596/93‑1 (MQ=255)
tGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTacac < 2:4746708/93‑1 (MQ=255)
gACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACg > 1:5288860/1‑93 (MQ=255)
aCTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGc > 1:5056215/1‑93 (MQ=255)
cTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCt < 1:1915066/93‑1 (MQ=255)
tCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTg > 1:86756/1‑93 (MQ=255)
cATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGAt > 1:3890007/1‑93 (MQ=255)
tAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATAc < 1:6570139/93‑1 (MQ=255)
tAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATAc < 1:2781074/93‑1 (MQ=255)
tAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATAc > 2:2957758/1‑93 (MQ=255)
aTTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACaa < 1:4528038/93‑1 (MQ=255)
tttCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAAt < 1:9593134/93‑1 (MQ=255)
tttCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAAt < 2:1159400/93‑1 (MQ=255)
tttCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAAt < 2:7902511/93‑1 (MQ=255)
ttCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATc < 1:9658125/93‑1 (MQ=255)
ttCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATc < 1:3181926/93‑1 (MQ=255)
ttCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATc > 2:1842262/1‑93 (MQ=255)
ttCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATc < 2:6705184/93‑1 (MQ=255)
tCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATcg < 1:6453783/93‑1 (MQ=255)
cccTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATcgc < 1:3647604/93‑1 (MQ=255)
cTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATcgccg > 2:1095567/1‑93 (MQ=255)
cTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATcgccg < 2:5759297/93‑1 (MQ=255)
cTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATcgccg > 2:7138462/1‑93 (MQ=255)
ttttGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATcgccgc > 2:5214169/1‑93 (MQ=255)
tttGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCa > 2:2066477/1‑93 (MQ=255)
ttGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCAt > 2:7400680/1‑93 (MQ=255)
tGATCCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCAtt < 2:9762336/93‑1 (MQ=255)
tGAGCCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCAtt < 2:9438731/93‑1 (MQ=255)
tGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCAtt < 1:6190792/93‑1 (MQ=255)
tGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCCCAtt > 2:2450779/1‑93 (MQ=255)
gAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCAttt > 2:5608542/1‑93 (MQ=255)
aaCCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCAtttt > 1:2333498/1‑93 (MQ=255)
aCCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCAttttt > 1:7590051/1‑92 (MQ=255)
cTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTttctt > 1:2150699/1‑93 (MQ=255)
tCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTttcttc > 1:1228775/1‑93 (MQ=255)
tCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTttcttc > 2:8498649/1‑93 (MQ=255)
cGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCa > 2:1961668/1‑93 (MQ=255)
ccTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAgc > 2:1478197/1‑93 (MQ=255)
cTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAgcg < 1:3451637/93‑1 (MQ=255)
cTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAgcg > 2:8909586/1‑93 (MQ=255)
gCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCa > 1:298194/1‑93 (MQ=255)
gCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCa < 2:6011981/93‑1 (MQ=255)
aaaGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACg > 1:8754610/1‑93 (MQ=255)
aGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGa < 1:5656252/93‑1 (MQ=255)
aaCTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGaa < 1:5738665/92‑1 (MQ=255)
tcTAGCGATGAAGGATGTATATTCGAGAAATCAGCAAGTTGCTGCAAGTGACACGCTGATACAATCGCCGCATCTTCCTCCAGCGCTCGGTAc > 2:8979718/2‑93 (MQ=255)
|
TGACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAACGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAACA > NC_000913/1596877‑1597056
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTTGACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAACGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAACAATGT > NC_000913/1596874‑1597060
|
CTTTGACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAG < SRR4302540.5074166/94‑1 (MQ=60)
TTTGACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGC < SRR4302540.5573717/94‑1 (MQ=60)
TTTGACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGC < SRR4302540.3915630/94‑1 (MQ=60)
TTTGACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGC < SRR4302540.127201/94‑1 (MQ=60)
TTGACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCG > SRR4302540.1145021/1‑94 (MQ=60)
TTGACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCG < SRR4302540.2930908/94‑1 (MQ=60)
TTGACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCG < SRR4302540.8198536/94‑1 (MQ=60)
TGACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGA > SRR4302540.4721835/1‑94 (MQ=60)
GACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGAT > SRR4302540.8619028/1‑94 (MQ=60)
GACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGAT < SRR4302540.9135848/94‑1 (MQ=60)
ACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATG < SRR4302540.3956625/94‑1 (MQ=60)
ACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATG < SRR4302540.7987974/94‑1 (MQ=60)
CCCCCGGAATATTGCCGGGTAATCCCGAGACATCAGCGAGAATTTGCCTCCATAATCTCCCTTTTGACCCTCCGCCTGCAAAGACTAGCGATGA < SRR4302540.5223120/94‑1 (MQ=60)
CACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAA > SRR4302540.5202933/1‑94 (MQ=60)
CACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAA > SRR4302540.2777141/1‑94 (MQ=60)
CACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAA < SRR4302540.1839876/94‑1 (MQ=60)
CACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAA > SRR4302540.5527662/1‑94 (MQ=60)
ACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCAGCCTGCAAAGACTAGCGATGAAG < SRR4302540.1842503/94‑1 (MQ=60)
ACCGGAATATGGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCTTTTTGAACCCCCGCCTGCAAAGACTAGCGATGAAG < SRR4302540.6607209/94‑1 (MQ=60)
CCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGG < SRR4302540.6728820/94‑1 (MQ=60)
CCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGG > SRR4302540.2737708/1‑94 (MQ=60)
CCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGG < SRR4302540.1513991/94‑1 (MQ=60)
CGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGA > SRR4302540.3664294/1‑94 (MQ=60)
CGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGA < SRR4302540.9519916/94‑1 (MQ=60)
CGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGA > SRR4302540.3161355/1‑94 (MQ=60)
CGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGA > SRR4302540.2373672/1‑94 (MQ=60)
CGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGA > SRR4302540.9676196/1‑94 (MQ=60)
GGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGAT < SRR4302540.275932/94‑1 (MQ=60)
GGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGAT > SRR4302540.6472139/1‑94 (MQ=60)
GGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGAT > SRR4302540.13979/1‑94 (MQ=60)
GGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGAG > SRR4302540.3296366/1‑94 (MQ=60)
GAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATG < SRR4302540.7810955/94‑1 (MQ=60)
GAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATG < SRR4302540.8706851/94‑1 (MQ=60)
AATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAGCCTCCGCCTGCAAAGACTAGCGATGAAGGATGA < SRR4302540.6752400/94‑1 (MQ=60)
AATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGA < SRR4302540.5574198/94‑1 (MQ=60)
ATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAA < SRR4302540.1068932/94‑1 (MQ=60)
ATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAA > SRR4302540.465271/1‑94 (MQ=60)
ATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAA < SRR4302540.4987443/94‑1 (MQ=60)
ATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAA > SRR4302540.9733661/1‑94 (MQ=60)
TATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAAT < SRR4302540.8143036/94‑1 (MQ=60)
TATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAAT > SRR4302540.9202392/1‑94 (MQ=60)
TATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAAT > SRR4302540.8169562/1‑94 (MQ=60)
TGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATT > SRR4302540.9518020/1‑94 (MQ=60)
TGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATT > SRR4302540.431936/1‑94 (MQ=60)
TGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATT > SRR4302540.504192/1‑94 (MQ=60)
GACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTC < SRR4302540.8551169/94‑1 (MQ=60)
GACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTC > SRR4302540.9302806/1‑94 (MQ=60)
GACGGGTAATCCCGAGACATCAGCGAGAATTTCACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTC < SRR4302540.2216486/94‑1 (MQ=60)
GCGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCG < SRR4302540.3136952/94‑1 (MQ=60)
ACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCG < SRR4302540.7511737/94‑1 (MQ=60)
ACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCG > SRR4302540.6266475/1‑94 (MQ=60)
CGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGA > SRR4302540.10109481/1‑94 (MQ=60)
CGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGA > SRR4302540.1896458/1‑94 (MQ=60)
GGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAG > SRR4302540.5672828/1‑94 (MQ=60)
GGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAG < SRR4302540.513093/94‑1 (MQ=60)
GGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAG < SRR4302540.5091123/94‑1 (MQ=60)
GGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAG > SRR4302540.3687110/1‑94 (MQ=60)
GGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAG > SRR4302540.4181176/1‑94 (MQ=60)
GGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGA > SRR4302540.3415219/1‑94 (MQ=60)
GTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAA < SRR4302540.757473/94‑1 (MQ=60)
AATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAAT > SRR4302540.7408613/1‑94 (MQ=60)
AATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAAT < SRR4302540.7332704/94‑1 (MQ=60)
AATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAAT > SRR4302540.4201956/1‑94 (MQ=60)
AATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAAT > SRR4302540.9872975/1‑94 (MQ=60)
ATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAGCCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATC < SRR4302540.1949826/94‑1 (MQ=60)
TCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCA > SRR4302540.9439790/1‑94 (MQ=60)
ACCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCA < SRR4302540.784654/94‑1 (MQ=60)
CCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAG < SRR4302540.3848805/94‑1 (MQ=60)
CCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGC < SRR4302540.795906/94‑1 (MQ=60)
CGAGACATCAGCGAGAATTTGACTTCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCA < SRR4302540.8280568/94‑1 (MQ=60)
CGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCA > SRR4302540.6625503/1‑94 (MQ=60)
CGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCA > SRR4302540.970944/1‑94 (MQ=60)
GAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAA > SRR4302540.10034045/1‑94 (MQ=60)
GAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAA > SRR4302540.3149346/1‑94 (MQ=60)
AGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAAT < SRR4302540.725812/94‑1 (MQ=60)
AGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAAT > SRR4302540.5790126/1‑94 (MQ=60)
GACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATT < SRR4302540.6589614/94‑1 (MQ=60)
ACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTT > SRR4302540.931526/1‑94 (MQ=60)
ACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTT < SRR4302540.2196703/94‑1 (MQ=60)
ACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTT < SRR4302540.2360601/94‑1 (MQ=60)
CATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTG < SRR4302540.5622796/94‑1 (MQ=60)
CATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTG > SRR4302540.2562135/1‑94 (MQ=60)
CATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTG > SRR4302540.9574393/1‑94 (MQ=60)
ATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGC < SRR4302540.10044390/94‑1 (MQ=60)
ATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGC > SRR4302540.4150614/1‑94 (MQ=60)
ATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGC > SRR4302540.3576018/1‑94 (MQ=60)
ATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGC > SRR4302540.3454525/1‑94 (MQ=60)
ATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGC > SRR4302540.882213/1‑94 (MQ=60)
TCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCT < SRR4302540.827866/94‑1 (MQ=60)
TCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCT < SRR4302540.320162/94‑1 (MQ=60)
TCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCT < SRR4302540.1007038/94‑1 (MQ=60)
CAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTG > SRR4302540.8170501/1‑94 (MQ=60)
CAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTG > SRR4302540.2198939/1‑94 (MQ=60)
CAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCACCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTG < SRR4302540.304782/94‑1 (MQ=60)
CGAGAATTTTACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAA > SRR4302540.6724161/1‑94 (MQ=60)
CGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTCACGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAA > SRR4302540.6091046/1‑94 (MQ=60)
CGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAA > SRR4302540.9979803/1‑94 (MQ=60)
CGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAA < SRR4302540.3975317/94‑1 (MQ=60)
CGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAA > SRR4302540.2998963/1‑94 (MQ=60)
GAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAG > SRR4302540.3243684/1‑94 (MQ=60)
ATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTAC > SRR4302540.6963724/1‑94 (MQ=60)
ATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTAC < SRR4302540.5015678/94‑1 (MQ=60)
ATTTGACTCCATAATTCCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTAC < SRR4302540.4219131/94‑1 (MQ=60)
TGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACG > SRR4302540.5346665/1‑94 (MQ=60)
TGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACG < SRR4302540.4638947/94‑1 (MQ=60)
GACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGC > SRR4302540.5110881/1‑94 (MQ=60)
GACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGC > SRR4302540.3962542/1‑94 (MQ=60)
GACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGC > SRR4302540.5110880/1‑94 (MQ=60)
CTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTG < SRR4302540.1935971/94‑1 (MQ=60)
CTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTG > SRR4302540.87674/1‑94 (MQ=60)
CTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTG > SRR4302540.87675/1‑94 (MQ=60)
CCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGAT < SRR4302540.7947577/94‑1 (MQ=60)
CCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGAT > SRR4302540.3932244/1‑94 (MQ=60)
CATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATA < SRR4302540.1518253/94‑1 (MQ=60)
ATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGACATCAGCAATTTGCTGCAAGTTACACGCTGATAC > SRR4302540.5080358/1‑94 (MQ=60)
ATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAAGCAGCAATTTGCTGCAAGTTACACGCTGATAC > SRR4302540.5080357/1‑94 (MQ=60)
TAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACA < SRR4302540.2811116/94‑1 (MQ=60)
TAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACA < SRR4302540.6642937/94‑1 (MQ=60)
AATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAA < SRR4302540.8943968/94‑1 (MQ=60)
AATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAA < SRR4302540.7466505/94‑1 (MQ=60)
ATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAAT > SRR4302540.9788393/1‑94 (MQ=60)
ATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAAT < SRR4302540.4577063/94‑1 (MQ=60)
TTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATC < SRR4302540.9462913/94‑1 (MQ=60)
TTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATC < SRR4302540.9706346/94‑1 (MQ=60)
TTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATC > SRR4302540.9868773/1‑94 (MQ=60)
TTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATC < SRR4302540.3390043/94‑1 (MQ=60)
TTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATC < SRR4302540.5941046/94‑1 (MQ=60)
TTTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATC < SRR4302540.9462912/94‑1 (MQ=60)
TTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCG < SRR4302540.3216499/94‑1 (MQ=60)
TTCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCG < SRR4302540.9771819/94‑1 (MQ=60)
TCCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGC < SRR4302540.6525624/94‑1 (MQ=60)
CCCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCC < SRR4302540.3687560/94‑1 (MQ=60)
CCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACACTCGCCC > SRR4302540.228686/1‑94 (MQ=60)
CCTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCG > SRR4302540.228678/1‑94 (MQ=60)
CTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATAGAATCGCCGA > SRR4302540.4044958/1‑94 (MQ=60)
CTTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGC > SRR4302540.4044957/1‑94 (MQ=60)
TTTTGAACCTCCGCCTGCAGAGACTAGCGATGAATGAGGAATATTCGAGAAAGCGGCAATTTGCTGCAAGGTACACGCTGATACAATTGCCGTA > SRR4302540.6413925/1‑94 (MQ=60)
TTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCA > SRR4302540.1226760/1‑94 (MQ=60)
TTTTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCA > SRR4302540.6413924/1‑94 (MQ=60)
TTGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATT < SRR4302540.4812293/94‑1 (MQ=60)
TGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTT < SRR4302540.6259714/94‑1 (MQ=60)
TGAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTT < SRR4302540.5551311/94‑1 (MQ=60)
GAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTT > SRR4302540.2358642/1‑94 (MQ=60)
GAACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTT > SRR4302540.4196881/1‑94 (MQ=60)
AACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTT > SRR4302540.7675300/1‑94 (MQ=60)
AACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTT > SRR4302540.7675301/1‑94 (MQ=60)
AACCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTC > SRR4302540.8869792/1‑94 (MQ=60)
CCTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTT > SRR4302540.2173826/1‑94 (MQ=60)
CTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTC > SRR4302540.1241329/1‑94 (MQ=60)
CTCCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTC > SRR4302540.667266/1‑94 (MQ=60)
CCGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCA < SRR4302540.3453196/94‑1 (MQ=60)
CGCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAG > SRR4302540.2974665/1‑94 (MQ=60)
GCCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGC > SRR4302540.9157027/1‑94 (MQ=60)
CCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCG < SRR4302540.5106202/94‑1 (MQ=60)
CCTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGGTACACGCTGATACAATCGCCGCATTTTCTTCCAGCG > SRR4302540.3753969/1‑94 (MQ=60)
CCTGCAAAGACTAGCGATGAAGGATGAATATACGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCG < SRR4302540.6653600/94‑1 (MQ=60)
CTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGC < SRR4302540.3489182/94‑1 (MQ=60)
CTGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGC > SRR4302540.1287675/1‑94 (MQ=60)
TGCAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCA > SRR4302540.301144/1‑94 (MQ=60)
CAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACG > SRR4302540.8641875/1‑94 (MQ=60)
CAAAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACG > SRR4302540.8856165/1‑94 (MQ=60)
AAGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGA < SRR4302540.7569530/94‑1 (MQ=60)
AGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAA > SRR4302540.9367047/1‑94 (MQ=60)
AGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAA < SRR4302540.5718534/94‑1 (MQ=60)
AGACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGAGCACGGAA < SRR4302540.5718535/94‑1 (MQ=60)
AACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAAC < SRR4302540.5801918/94‑1 (MQ=60)
ACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAACA > SRR4302540.321957/1‑94 (MQ=60)
ACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAACA < SRR4302540.7434851/94‑1 (MQ=60)
ACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAACA > SRR4302540.1773449/1‑94 (MQ=60)
ACTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACCCCGATACAATCGCCGCATTTTCTTCCAGAGCACCGCACA > SRR4302540.321958/1‑94 (MQ=60)
CTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAACAA > SRR4302540.3531088/1‑94 (MQ=60)
CTAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAACAA < SRR4302540.2093676/94‑1 (MQ=60)
TAGCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAACAAT > SRR4302540.10069404/1‑94 (MQ=60)
GCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAACAATGT < SRR4302540.1325185/94‑1 (MQ=60)
GCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAACAATGT < SRR4302540.8107843/94‑1 (MQ=60)
GCGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAACAATGT < SRR4302540.5161605/94‑1 (MQ=60)
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CTTTGACCACCGGAATATTGACGGGTAATCCCGAGACATCAGCGAGAATTTGACTCCATAATTTCCCTTTTGAACCTCCGCCTGCAAAGACTAACGATGAAGGATGAATATTCGAGAAATCAGCAATTTGCTGCAAGTTACACGCTGATACAATCGCCGCATTTTCTTCCAGCGCACGGAACAATGT > NC_000913/1596874‑1597060
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
