Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,610,443 |
A→G |
V278A (GTC→GCC) |
yneH ← |
putative glutaminase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,610,443 | 0 | A | G | 99.5%
| 657.3
/ NA
| 204 | V278A (GTC→GCC) | yneH | putative glutaminase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (120/83); minor base C (1/0); total (121/83) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 212 total aligned reads displayed.
TAAACCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGACAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCAAACTCC > NC_000913/1610353‑1610532
|
taaACCGAACGCCCTAACTGTGTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCa < 1:9441185/93‑1 (MQ=255)
aaaCCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAg > 1:6571969/1‑93 (MQ=255)
aaaCCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAg > 1:7283208/1‑93 (MQ=255)
aaCCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGc < 1:5735896/93‑1 (MQ=255)
aaCCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGc > 1:3669026/1‑93 (MQ=255)
aCCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCg > 1:710023/1‑93 (MQ=255)
aCCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCg < 2:9126709/93‑1 (MQ=255)
ccGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGa < 2:5376392/93‑1 (MQ=255)
ccGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGa < 1:6912116/93‑1 (MQ=255)
ccGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGa < 1:4044446/93‑1 (MQ=255)
ccGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGa < 1:471298/93‑1 (MQ=255)
cGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGAt > 2:3564104/1‑93 (MQ=255)
gAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATg > 1:1324175/1‑93 (MQ=255)
gAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATg < 2:2424553/93‑1 (MQ=255)
aaCGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATgg > 2:6246162/1‑93 (MQ=255)
aaCGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATgg > 2:9303746/1‑93 (MQ=255)
aaCGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATgg < 1:2055230/93‑1 (MQ=255)
aCGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGc < 2:5919740/93‑1 (MQ=255)
cGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGcc < 2:3179101/93‑1 (MQ=255)
cGCCCTAACGGTTGCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGcc < 1:1164423/93‑1 (MQ=255)
cccTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCAt < 1:1914796/93‑1 (MQ=255)
ccTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCAtt > 1:7669633/1‑93 (MQ=255)
tAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTc > 2:8056720/1‑93 (MQ=255)
tAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTc > 2:2900202/1‑93 (MQ=255)
aCTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCAt > 1:4890045/1‑93 (MQ=255)
aCTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCAt > 2:8806928/1‑93 (MQ=255)
aCTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTAAt < 1:2649157/93‑1 (MQ=255)
aCTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCACGCAGCGATGGCCATTTCAt > 2:1666937/1‑93 (MQ=255)
aCTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTACATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCAt > 2:8181013/1‑93 (MQ=255)
tGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGc > 1:9825131/1‑93 (MQ=255)
tGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGc < 1:7814517/93‑1 (MQ=255)
tttCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCgg > 2:6546657/1‑93 (MQ=255)
ttCGTCAATTGTTCAAGAATGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGa > 1:5223166/1‑93 (MQ=255)
cGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAAc < 2:1357094/93‑1 (MQ=255)
cGTCAATTGTTCAAGAAAGACAATACCCGCAAGCGAGTTACATGCATCATCCAGTTCCGGCCTCCAGGCAGCGATGGCCATTTCATGAGGAAc < 1:8959569/93‑1 (MQ=255)
gTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGCTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACa > 1:1555657/1‑93 (MQ=255)
tCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACaa > 2:244836/1‑93 (MQ=255)
cAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAAt < 2:7809089/93‑1 (MQ=255)
cAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAAt > 2:229531/1‑93 (MQ=255)
aTTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCg < 1:9000525/93‑1 (MQ=255)
gTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCca > 2:1098126/1‑93 (MQ=255)
ttCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCcac > 1:8243064/1‑93 (MQ=255)
tCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCcaca > 1:1448505/1‑93 (MQ=255)
cAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACaa > 2:5460892/1‑93 (MQ=255)
cAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACaa < 2:9109028/93‑1 (MQ=255)
cAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACaa > 2:174136/1‑93 (MQ=255)
cAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACaa < 1:4469845/93‑1 (MQ=255)
cAAGAACGGCAATACCCGCAAGCGAGTTAACTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGCACAATCGGCACaa > 2:5708966/1‑93 (MQ=255)
aGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATa > 2:9543456/1‑93 (MQ=255)
gAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATAc < 1:3951253/93‑1 (MQ=255)
gAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATAc < 2:7973154/93‑1 (MQ=255)
gAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATAc < 2:168445/93‑1 (MQ=255)
aCGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCg > 2:307717/1‑93 (MQ=255)
cGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGc < 1:9662344/93‑1 (MQ=255)
gCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGcca > 1:5532550/1‑93 (MQ=255)
cAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGccac < 1:5502504/93‑1 (MQ=255)
aaTACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGccacc < 1:8408459/93‑1 (MQ=255)
aaTACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGccacc > 1:102177/1‑93 (MQ=255)
aaTACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGccacc > 2:4452612/1‑93 (MQ=255)
aTACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGccacca > 1:4160042/1‑93 (MQ=255)
aCCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAAc > 2:7343181/1‑93 (MQ=255)
cAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAg > 2:7051808/1‑93 (MQ=255)
aaGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGa < 2:1530633/93‑1 (MQ=255)
aGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGAt < 1:5880306/93‑1 (MQ=255)
aGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGAt > 2:4520016/1‑93 (MQ=255)
cGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGAttt < 2:772286/93‑1 (MQ=255)
gAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTc < 2:345542/93‑1 (MQ=255)
gAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTc < 2:4813266/93‑1 (MQ=255)
aGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCg > 1:283518/1‑93 (MQ=255)
gTTACCTGCGTCATCCAGTTCCGTACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGc < 2:9672594/93‑1 (MQ=255)
ttACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGcc < 1:776074/93‑1 (MQ=255)
tACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCg < 2:72756/93‑1 (MQ=255)
aCCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCgg < 2:7011872/93‑1 (MQ=255)
cTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATGGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTa < 2:456230/93‑1 (MQ=255)
cTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTa > 1:3832951/1‑93 (MQ=255)
cTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTa > 1:8779277/1‑93 (MQ=255)
tGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCAGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGGCGGTAg > 2:3910540/1‑93 (MQ=255)
gCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGc > 2:4965675/1‑93 (MQ=255)
gCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGc < 2:5755144/93‑1 (MQ=255)
catcatCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGCACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGcc > 1:8175996/1‑93 (MQ=255)
catcatCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGcc > 2:4191335/1‑93 (MQ=255)
catcatCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGcc > 1:9076538/1‑93 (MQ=255)
atcatcCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGccc < 1:1258333/93‑1 (MQ=255)
atcatcCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGccc < 1:6086951/93‑1 (MQ=255)
tcatcCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGcccc > 1:1357465/1‑93 (MQ=255)
ctcCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCAc < 1:747350/92‑1 (MQ=255)
tcCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCAcc > 1:9587237/1‑93 (MQ=255)
tcCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCAcc < 2:5037600/93‑1 (MQ=255)
tcCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCAcc < 1:2350335/93‑1 (MQ=255)
cAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCAcccc > 1:9139963/1‑92 (MQ=255)
gTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGACCCACCCGcc < 2:4851946/93‑1 (MQ=255)
ttCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGcag > 1:6777593/1‑91 (MQ=255)
ttCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCa < 1:3084501/93‑1 (MQ=255)
ccGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAgg < 2:1284668/93‑1 (MQ=255)
cTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCAAAc > 1:9547916/1‑93 (MQ=255)
cTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCAAAc < 2:5104046/93‑1 (MQ=255)
tCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCAAACt < 2:2676348/93‑1 (MQ=255)
tCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCAAACt > 2:3753099/1‑93 (MQ=255)
tCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGCTAGCCCCACCCGCCAGGCAAACt > 2:5535124/1‑93 (MQ=255)
cAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCAAACTcc < 2:8126511/93‑1 (MQ=255)
|
TAAACCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGACAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCAAACTCC > NC_000913/1610353‑1610532
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAATAAACCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGACAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCAAACTCCCCC > NC_000913/1610350‑1610535
|
TAATAAACCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGG < SRR4302540.87016/94‑1 (MQ=60)
ATAAACCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCA < SRR4302540.7080200/94‑1 (MQ=60)
TAAACCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAG > SRR4302540.7364484/1‑94 (MQ=60)
TAAACCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAG > SRR4302540.6644782/1‑94 (MQ=60)
TAAACCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAG < SRR4302540.9553294/94‑1 (MQ=60)
TAAACCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAG > SRR4302540.1453612/1‑94 (MQ=60)
TAAACCGAACGCCCTAACTGTGTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAG < SRR4302540.9553293/94‑1 (MQ=60)
AAACCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGC > SRR4302540.3709162/1‑94 (MQ=60)
AACCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCG < SRR4302540.5799082/94‑1 (MQ=60)
AACCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCG > SRR4302540.717650/1‑94 (MQ=60)
CCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGAT < SRR4302540.476348/94‑1 (MQ=60)
CCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGAT < SRR4302540.6989033/94‑1 (MQ=60)
CCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGAT < SRR4302540.4088051/94‑1 (MQ=60)
CGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATG > SRR4302540.1337983/1‑94 (MQ=60)
CGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATG > SRR4302540.6533379/1‑94 (MQ=60)
AACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGC < SRR4302540.2077352/94‑1 (MQ=60)
AACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGC > SRR4302540.7829824/1‑94 (MQ=60)
ACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCC > SRR4302540.1344007/1‑94 (MQ=60)
CGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCA > SRR4302540.4523031/1‑94 (MQ=60)
CGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCA > SRR4302540.7047185/1‑94 (MQ=60)
CGCCCTAACGGTTGCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCA < SRR4302540.1176505/94‑1 (MQ=60)
GCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCAT > SRR4302540.8433438/1‑94 (MQ=60)
GCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCAT > SRR4302540.5586777/1‑94 (MQ=60)
CCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATT < SRR4302540.1935697/94‑1 (MQ=60)
CCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATT > SRR4302540.7756096/1‑94 (MQ=60)
CCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATT > SRR4302540.7756097/1‑94 (MQ=60)
CCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTT < SRR4302540.1508663/94‑1 (MQ=60)
CCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTT > SRR4302540.3868920/1‑94 (MQ=60)
CCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCCAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTT > SRR4302540.7643440/1‑94 (MQ=60)
CTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTC > SRR4302540.5160202/1‑94 (MQ=60)
TAACTGTTTCGTCAATTGTTCAAGAACGGCAATCCCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCA < SRR4302540.9808295/94‑1 (MQ=60)
TAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCA > SRR4302540.5810369/1‑94 (MQ=60)
TAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCA > SRR4302540.4127719/1‑94 (MQ=60)
AACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCAT > SRR4302540.4942625/1‑94 (MQ=60)
AACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCAT < SRR4302540.5927691/94‑1 (MQ=60)
AACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCAT > SRR4302540.4942624/1‑94 (MQ=60)
ACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTAATG < SRR4302540.2677898/94‑1 (MQ=60)
CTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGC > SRR4302540.9940074/1‑94 (MQ=60)
TGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCG < SRR4302540.7905839/94‑1 (MQ=60)
TTTCGTCAATTGTTCAAGAATGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGA > SRR4302540.5280117/1‑94 (MQ=60)
CGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGCTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACA > SRR4302540.1572762/1‑94 (MQ=60)
CGTCAATTGTTCAAGAAAGACAATACCCGCAAGCGAGTTACATGCATCATCCAGTTCCGGCCTCCAGGCAGCGATGGCCATTTCATGAGGAACA < SRR4302540.9065523/94‑1 (MQ=60)
TCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAAT > SRR4302540.6972673/1‑94 (MQ=60)
CAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATC < SRR4302540.2358109/94‑1 (MQ=60)
CAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATC < SRR4302540.4019330/94‑1 (MQ=60)
ATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGC < SRR4302540.9108510/94‑1 (MQ=60)
ATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGC < SRR4302540.9108509/94‑1 (MQ=60)
ATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCCGAACAATCGC > SRR4302540.2552488/1‑94 (MQ=60)
GTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCAC > SRR4302540.8338866/1‑94 (MQ=60)
TTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACA > SRR4302540.1464254/1‑94 (MQ=60)
CAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAAT < SRR4302540.5533784/94‑1 (MQ=60)
CAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAAT < SRR4302540.4518312/94‑1 (MQ=60)
GAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACC < SRR4302540.5631438/94‑1 (MQ=60)
GAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACC < SRR4302540.7853082/94‑1 (MQ=60)
GAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACC > SRR4302540.6846810/1‑94 (MQ=60)
GAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACC < SRR4302540.3993902/94‑1 (MQ=60)
AACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCTACAATACCG < SRR4302540.7391871/94‑1 (MQ=60)
AACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCG < SRR4302540.1309579/94‑1 (MQ=60)
CGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCC < SRR4302540.9776080/94‑1 (MQ=60)
GGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCA > SRR4302540.5593479/1‑94 (MQ=60)
CAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACC > SRR4302540.103269/1‑94 (MQ=60)
CAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACC < SRR4302540.2731733/94‑1 (MQ=60)
CAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACC < SRR4302540.5563109/94‑1 (MQ=60)
AATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCA > SRR4302540.4205123/1‑94 (MQ=60)
AATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCA < SRR4302540.8506056/94‑1 (MQ=60)
TACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAAC < SRR4302540.4219828/94‑1 (MQ=60)
TACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAAC < SRR4302540.9484857/94‑1 (MQ=60)
TACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAAC < SRR4302540.9214128/94‑1 (MQ=60)
AAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGAT < SRR4302540.3881072/94‑1 (MQ=60)
AGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATT < SRR4302540.5945295/94‑1 (MQ=60)
GCGAGTTATCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTT < SRR4302540.8625985/94‑1 (MQ=60)
GAGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCG > SRR4302540.286306/1‑94 (MQ=60)
AGTTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGC > SRR4302540.1698628/1‑94 (MQ=60)
TTACCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCG < SRR4302540.784317/94‑1 (MQ=60)
attTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGTGGAACAATCGCCACAATACCTCCACCAACGCCAGATTTCGCCGGT > SRR4302540.9071558/4‑94 (MQ=60)
CCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTA > SRR4302540.8880934/1‑94 (MQ=60)
CCTGCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTA > SRR4302540.3874658/1‑94 (MQ=60)
TGCATCATCCAGTTCCGGACTCCATGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGC > SRR4302540.4090466/1‑94 (MQ=60)
GCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGCACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCC > SRR4302540.8270965/1‑94 (MQ=60)
GCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCC > SRR4302540.8270966/1‑94 (MQ=60)
GCATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCC > SRR4302540.9185558/1‑94 (MQ=60)
CATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCC > SRR4302540.9050888/1‑94 (MQ=60)
cacagcgcGTTCCGGACTCCAGGCAGCGATGGCCAGTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCC < SRR4302540.2958602/86‑1 (MQ=60)
ATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCC < SRR4302540.6154694/94‑1 (MQ=60)
ATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCC > SRR4302540.1371781/1‑94 (MQ=60)
ATCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCC < SRR4302540.1271233/94‑1 (MQ=60)
TCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCA > SRR4302540.7293639/1‑94 (MQ=60)
TCATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACAAACGCCAGATTTCGCCGGTAGCCCCA > SRR4302540.9130950/1‑94 (MQ=60)
ctccacgTCCGGGCTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACC < SRR4302540.755313/87‑1 (MQ=60)
CTCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACC < SRR4302540.755312/94‑1 (MQ=60)
ATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACC > SRR4302540.9700413/1‑94 (MQ=60)
ATCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACC > SRR4302540.9700412/1‑94 (MQ=60)
TCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCC < SRR4302540.115680/94‑1 (MQ=60)
TCCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCC < SRR4302540.2375644/94‑1 (MQ=60)
CCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCG > SRR4302540.8106595/1‑94 (MQ=60)
CCAGTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCC > SRR4302540.9249771/1‑94 (MQ=60)
GTTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCag > SRR4302540.6852512/1‑92 (MQ=60)
TTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAG < SRR4302540.3118346/94‑1 (MQ=60)
TTCCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAG < SRR4302540.200873/94‑1 (MQ=60)
CCGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGC > SRR4302540.3026531/1‑94 (MQ=60)
CGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCA > SRR4302540.5951596/1‑94 (MQ=60)
CGGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCA > SRR4302540.9968447/1‑94 (MQ=60)
GGACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCAA < SRR4302540.9753768/94‑1 (MQ=60)
GACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCAAA > SRR4302540.1232925/1‑94 (MQ=60)
ACTCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCAAAC > SRR4302540.9660868/1‑94 (MQ=60)
ACCCCAGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCAAAC < SRR4302540.3389303/94‑1 (MQ=60)
AGGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCAAACTCCCC > SRR4302540.5332649/1‑94 (MQ=60)
GGCAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCAAACTCCCCC < SRR4302540.6249906/94‑1 (MQ=60)
|
TAATAAACCGAACGCCCTAACTGTTTCGTCAATTGTTCAAGAACGGCAATACCCGCAAGCGAGTTACCTGCATCATCCAGTTCCGGACTCCAGACAGCGATGGCCATTTCATGCGGAACAATCGCCACAATACCGCCACCAACGCCAGATTTCGCCGGTAGCCCCACCCGCCAGGCAAACTCCCCC > NC_000913/1610350‑1610535
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
