Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,612,018 |
C→T |
G245D (GGT→GAT) |
b1525 ← |
putative aldehyde dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,612,018 | 0 | C | T | 100.0%
| 841.8
/ NA
| 228 | G245D (GGT→GAT) | b1525 | putative aldehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (121/107); total (121/107) |
Only 100 of 236 total aligned reads displayed.
CCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAACCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACA > NC_000913/1611929‑1612107
|
ccTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGc < 1:2053087/93‑1 (MQ=255)
ccTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGc > 1:6582141/1‑93 (MQ=255)
cGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGtt > 2:5680819/1‑93 (MQ=255)
gTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTcc > 1:8290812/1‑93 (MQ=255)
gTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTcc < 2:5563357/93‑1 (MQ=255)
tATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCa < 2:9759658/93‑1 (MQ=255)
tATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCa < 1:767050/93‑1 (MQ=255)
aTTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAg < 1:2823411/93‑1 (MQ=255)
ttCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAga > 2:2008401/1‑92 (MQ=255)
tCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTa < 2:973321/93‑1 (MQ=255)
tCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTa > 1:8661772/1‑93 (MQ=255)
tCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTa > 1:3347007/1‑93 (MQ=255)
cTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTAc < 2:1549271/93‑1 (MQ=255)
cTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTAc > 2:890804/1‑93 (MQ=255)
tGATAACGCCCGGCTGCCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACg < 1:7149418/93‑1 (MQ=255)
tAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCAt < 1:3279524/93‑1 (MQ=255)
tAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCAt > 2:7150948/1‑93 (MQ=255)
aCGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCAttt < 1:8790033/93‑1 (MQ=255)
aCGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCAttt > 2:5832873/1‑93 (MQ=255)
gCTACCGCCGCTTTCACTGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATGGCCCAGTTCCAGTACGCATTTTTTCAGt > 1:2647236/1‑93 (MQ=255)
gCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGt < 2:2232333/93‑1 (MQ=255)
cTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGtc > 2:5069626/1‑92 (MQ=255)
cTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTg < 1:8238388/93‑1 (MQ=255)
tACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGc < 2:9416977/93‑1 (MQ=255)
aCCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGcc > 2:5933124/1‑93 (MQ=255)
ccgccgCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCg < 2:988353/93‑1 (MQ=255)
ccgccgCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCg > 2:5650197/1‑93 (MQ=255)
ccgccgCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCg < 2:1411146/93‑1 (MQ=255)
cgccgcTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGc > 2:418368/1‑93 (MQ=255)
ccgcTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTc > 2:4277807/1‑93 (MQ=255)
cgcTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTcc < 1:4718885/93‑1 (MQ=255)
gcTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCATGGCCGCTCCa > 2:5755002/1‑93 (MQ=255)
gcTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCa > 1:5464230/1‑93 (MQ=255)
cTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCac > 1:5033948/1‑92 (MQ=255)
cTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAg > 2:7891781/1‑93 (MQ=255)
tttCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGc > 2:880341/1‑93 (MQ=255)
ttCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGcc > 1:10031562/1‑93 (MQ=255)
tCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCt > 2:9238766/1‑93 (MQ=255)
cGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTgc < 2:7657260/93‑1 (MQ=255)
cGCCAGTGCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTgc < 2:2421075/93‑1 (MQ=255)
ccAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTgcgc < 2:8777810/93‑1 (MQ=255)
aGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCa < 2:3616534/93‑1 (MQ=255)
gTTCCATATCGTCTTCGTTAAGCATAATTAACGGTTCCGAATCGTCCAGGTCCAGGTCGCATGTTTTCAGTGCCGCTCCATCCGGCGCGCCat > 1:8942563/1‑92 (MQ=255)
ttCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAAt < 2:8243936/93‑1 (MQ=255)
tCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTTCCGCTCCAGCCTGTGCGCCAATa > 2:7277160/1‑93 (MQ=255)
tCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATa > 2:4795179/1‑93 (MQ=255)
tCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATa > 1:9129338/1‑93 (MQ=255)
ccAGATCGGCATCGTTAAGCACAATAACCGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAg < 1:6328615/93‑1 (MQ=255)
ccAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAg < 2:8261919/93‑1 (MQ=255)
ccAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAg > 1:1589/1‑93 (MQ=255)
cAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCCATAGc > 2:6281584/1‑93 (MQ=255)
cAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGc < 1:9740724/93‑1 (MQ=255)
aGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGcc < 2:8103835/93‑1 (MQ=255)
gATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCg > 1:8601902/1‑93 (MQ=255)
tCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCt > 1:785140/1‑93 (MQ=255)
tCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCt < 2:3501979/93‑1 (MQ=255)
gCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTccc < 1:7999827/93‑1 (MQ=255)
gCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTccc > 2:4655311/1‑93 (MQ=255)
cATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCg < 1:4419119/93‑1 (MQ=255)
cATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCg < 2:6078209/93‑1 (MQ=255)
aTCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGc > 2:3336843/1‑93 (MQ=255)
aTCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGc > 1:2541298/1‑93 (MQ=255)
aTCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGc > 1:19394/1‑93 (MQ=255)
tCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCGGCa > 1:3615437/1‑93 (MQ=255)
tCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGcc > 1:2099760/1‑92 (MQ=255)
tCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCa < 1:5644150/93‑1 (MQ=255)
cGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCAc > 1:7273938/1‑93 (MQ=255)
cGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCAc < 2:1738579/93‑1 (MQ=255)
gTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACg > 2:9939774/1‑93 (MQ=255)
ttAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGa > 1:9206196/1‑93 (MQ=255)
ttAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGa > 1:3761618/1‑93 (MQ=255)
ttAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGa > 1:4976180/1‑93 (MQ=255)
tAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGaa < 2:5097161/93‑1 (MQ=255)
tAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGaa < 1:9612683/93‑1 (MQ=255)
tAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGaa > 2:8160886/1‑93 (MQ=255)
aaGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAac > 2:7050338/1‑93 (MQ=255)
cacaATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACt < 2:2999502/93‑1 (MQ=255)
caATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTc > 2:521304/1‑93 (MQ=255)
caATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTc < 1:1614033/93‑1 (MQ=255)
caATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTc < 1:2764592/93‑1 (MQ=255)
caATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTc > 1:9386516/1‑93 (MQ=255)
caATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTc < 1:7208559/93‑1 (MQ=255)
caATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTc < 2:3709568/93‑1 (MQ=255)
aaTAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAATACTTcc < 2:9759533/93‑1 (MQ=255)
aaTAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTcc < 2:2793975/93‑1 (MQ=255)
aaTAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTcc > 1:3926477/1‑93 (MQ=255)
aaTAAACGGATCCGAATCGCCCAGTTCCAGGACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTcc < 1:3722376/93‑1 (MQ=255)
aTAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCg < 2:1935724/93‑1 (MQ=255)
aTAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCg > 1:2916422/1‑93 (MQ=255)
tAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCgg < 2:6443830/93‑1 (MQ=255)
tAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCgg > 2:148747/1‑93 (MQ=255)
aaaCGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACCAACACTTCCggc > 1:8632475/1‑92 (MQ=255)
aaCGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGCACACTTCCGGTc > 1:4282421/1‑93 (MQ=255)
aCGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCa > 1:6422990/1‑93 (MQ=255)
aCGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCa < 2:611261/93‑1 (MQ=255)
cGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCAc > 2:668800/1‑93 (MQ=255)
gATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCg > 2:4068580/1‑93 (MQ=255)
aTCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCCGTCAGCGt > 1:775946/1‑93 (MQ=255)
ccGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGa > 1:4196889/1‑93 (MQ=255)
cGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGAc < 1:9991457/93‑1 (MQ=255)
|
CCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAACCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACA > NC_000913/1611929‑1612107
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATACCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAACCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACAGCAG > NC_000913/1611925‑1612111
|
CATACCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAAT < SRR4302540.9692699/94‑1 (MQ=60)
ATACCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATC > SRR4302540.5123753/1‑94 (MQ=60)
ATACCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATC > SRR4302540.5997427/1‑94 (MQ=60)
ATACCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATC < SRR4302540.1646919/94‑1 (MQ=60)
ATACCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATC < SRR4302540.9158148/94‑1 (MQ=60)
ACCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGC > SRR4302540.6655051/1‑94 (MQ=60)
CCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCC < SRR4302540.2075192/94‑1 (MQ=60)
CTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCC > SRR4302540.908491/1‑94 (MQ=60)
TGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCA < SRR4302540.6918718/94‑1 (MQ=60)
TGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCA < SRR4302540.2844445/94‑1 (MQ=60)
CCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTT > SRR4302540.6515561/1‑94 (MQ=60)
GGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCC > SRR4302540.8387094/1‑94 (MQ=60)
GGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCC < SRR4302540.1629797/94‑1 (MQ=60)
GGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCCCACAGTTCC > SRR4302540.959345/1‑94 (MQ=60)
TATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAG < SRR4302540.775219/94‑1 (MQ=60)
ATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGT < SRR4302540.2853914/94‑1 (MQ=60)
ATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGT < SRR4302540.3992985/94‑1 (MQ=60)
TTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTA > SRR4302540.3383716/1‑94 (MQ=60)
TTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTA > SRR4302540.8762374/1‑94 (MQ=60)
CTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACG < SRR4302540.8427399/94‑1 (MQ=60)
TGATAACGCCCGGCTGCCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGC < SRR4302540.7229092/94‑1 (MQ=60)
GATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCA > SRR4302540.795185/1‑94 (MQ=60)
TAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATT < SRR4302540.2908041/94‑1 (MQ=60)
TAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATT < SRR4302540.3315345/94‑1 (MQ=60)
AACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTT < SRR4302540.9307615/94‑1 (MQ=60)
AACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTT < SRR4302540.8454384/94‑1 (MQ=60)
ACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTT < SRR4302540.9067274/94‑1 (MQ=60)
ACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTT < SRR4302540.8891733/94‑1 (MQ=60)
ACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCACATCGGCATCGCTAAGCACAATAAACGGATCCGAATCGCCCACTTCCAGCACGCATTTT > SRR4302540.8220738/1‑94 (MQ=60)
CGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTT > SRR4302540.7272297/1‑94 (MQ=60)
GTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTT < SRR4302540.7893072/94‑1 (MQ=60)
TCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTC < SRR4302540.8939526/94‑1 (MQ=60)
CCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCA < SRR4302540.38090/94‑1 (MQ=60)
CGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAG > SRR4302540.1954828/1‑94 (MQ=60)
GGCTACCGCCGCTTTCACTGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATGGCCCAGTTCCAGTACGCATTTTTTCAGT > SRR4302540.2675951/1‑94 (MQ=60)
GGCTACCGCCGCTTTCACTGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGT > SRR4302540.2675950/1‑94 (MQ=60)
GGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGT > SRR4302540.8131000/1‑94 (MQ=60)
GCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTG < SRR4302540.8704764/94‑1 (MQ=60)
GCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTG > SRR4302540.2076473/1‑94 (MQ=60)
CTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGC < SRR4302540.8334132/94‑1 (MQ=60)
TACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGACCAGTTCCAGTACGCATTTTTTCAGTCCC > SRR4302540.5555915/1‑94 (MQ=60)
TCCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCG < SRR4302540.8357007/94‑1 (MQ=60)
TCCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCA < SRR4302540.3445181/94‑1 (MQ=60)
CGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCA < SRR4302540.4769291/94‑1 (MQ=60)
CGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCA > SRR4302540.5524372/1‑94 (MQ=60)
GCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGTACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAG > SRR4302540.8758376/1‑94 (MQ=60)
GCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAC > SRR4302540.5088410/1‑94 (MQ=60)
GCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGATCAAGTACGCCTTTTTTCAGTGCCGCTCCAG > SRR4302540.4574017/1‑94 (MQ=60)
TTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCC > SRR4302540.10148251/1‑94 (MQ=60)
TTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCT < SRR4302540.9880104/94‑1 (MQ=60)
TCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTG > SRR4302540.3200602/1‑94 (MQ=60)
ACCGCCAGTTCCAGATCGGCATCGTTAAGCAGAATAAACGGATCGGAATCGCCAAGTTCAAGTACGCATTTTTTCAGTGCCGCTCCggcatggg > SRR4302540.2132472/1‑86 (MQ=60)
CCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGC < SRR4302540.9767753/94‑1 (MQ=60)
CGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCG < SRR4302540.2524871/94‑1 (MQ=60)
GTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAAT > SRR4302540.7012629/1‑94 (MQ=60)
TTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATA < SRR4302540.4859847/94‑1 (MQ=60)
TTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATA > SRR4302540.1292506/1‑94 (MQ=60)
TTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATA > SRR4302540.9239064/1‑94 (MQ=60)
TTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATA < SRR4302540.2805183/94‑1 (MQ=60)
TCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAG > SRR4302540.1602/1‑94 (MQ=60)
CCAGATCGGCATCGTTAAGCACAATAACCGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGC < SRR4302540.6399089/94‑1 (MQ=60)
CCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGC > SRR4302540.4316540/1‑94 (MQ=60)
CAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCTCTCCAGCCTGTGCGCCAATAGCC > SRR4302540.6335766/1‑94 (MQ=60)
CAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCC < SRR4302540.2742316/94‑1 (MQ=60)
CAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCC < SRR4302540.9618171/94‑1 (MQ=60)
CAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCC < SRR4302540.9855068/94‑1 (MQ=60)
CAGATCGGCATCGTTAAGCACAATAAACGGAGCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCC < SRR4302540.5031379/94‑1 (MQ=60)
AGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCG > SRR4302540.8701873/1‑94 (MQ=60)
AGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCG < SRR4302540.6458412/94‑1 (MQ=60)
GATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGC > SRR4302540.7971738/1‑94 (MQ=60)
ATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCT > SRR4302540.793486/1‑94 (MQ=60)
ATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCT > SRR4302540.2542527/1‑94 (MQ=60)
GCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCG < SRR4302540.8092940/94‑1 (MQ=60)
GCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCC > SRR4302540.7376151/1‑94 (MQ=60)
CATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGC > SRR4302540.2568700/1‑94 (MQ=60)
CATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGC > SRR4302540.19604/1‑94 (MQ=60)
CATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGC < SRR4302540.4466998/94‑1 (MQ=60)
ATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCGGCA > SRR4302540.3654975/1‑94 (MQ=60)
ATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCC > SRR4302540.2122301/1‑94 (MQ=60)
TCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCAC > SRR4302540.7355107/1‑94 (MQ=60)
TCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCAC < SRR4302540.5706269/94‑1 (MQ=60)
CGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCTGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACG > SRR4302540.3705063/1‑94 (MQ=60)
CGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACG > SRR4302540.3733935/1‑94 (MQ=60)
GTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGA > SRR4302540.9316662/1‑94 (MQ=60)
GTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGA > SRR4302540.5165023/1‑94 (MQ=60)
GTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGA > SRR4302540.201002/1‑94 (MQ=60)
GTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGA > SRR4302540.3763142/1‑94 (MQ=60)
GTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGA > SRR4302540.3802657/1‑94 (MQ=60)
GTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGA > SRR4302540.5030036/1‑94 (MQ=60)
TTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAA > SRR4302540.1918919/1‑94 (MQ=60)
TTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAA > SRR4302540.9429900/1‑94 (MQ=60)
TAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAAC < SRR4302540.9726021/94‑1 (MQ=60)
AGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACAC > SRR4302540.4742707/1‑94 (MQ=60)
CACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTT > SRR4302540.604155/1‑94 (MQ=60)
ACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTC < SRR4302540.5242471/94‑1 (MQ=60)
ACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTC > SRR4302540.9498238/1‑94 (MQ=60)
CAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCC < SRR4302540.7288923/94‑1 (MQ=60)
CAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCC < SRR4302540.2794463/94‑1 (MQ=60)
CAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCC > SRR4302540.3968951/1‑94 (MQ=60)
CAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCC < SRR4302540.1631746/94‑1 (MQ=60)
CAATAAACGGATCCGAATCGCCCAGTGCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCC < SRR4302540.435749/94‑1 (MQ=60)
AATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCG > SRR4302540.2948334/1‑94 (MQ=60)
AATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCG < SRR4302540.3322874/94‑1 (MQ=60)
AATAAACGGATCCGAATCGCCCAGTTCCAGGACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCG < SRR4302540.3762986/94‑1 (MQ=60)
AATAAACGGATCCGAATCGCCCAGGTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCG < SRR4302540.3322872/94‑1 (MQ=60)
TAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGC > SRR4302540.8733045/1‑94 (MQ=60)
TAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACCAACACTTCCGGC > SRR4302540.8732749/1‑94 (MQ=60)
AAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGCACACTTCCGGTC > SRR4302540.4329000/1‑94 (MQ=60)
AACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCA > SRR4302540.6494485/1‑94 (MQ=60)
ACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCAC < SRR4302540.7304450/94‑1 (MQ=60)
GGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCG < SRR4302540.4041386/94‑1 (MQ=60)
GATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGT > SRR4302540.784184/1‑94 (MQ=60)
GATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCCGTCAGCGT > SRR4302540.784189/1‑94 (MQ=60)
ATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTG > SRR4302540.8859137/1‑94 (MQ=60)
TCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGA > SRR4302540.4242546/1‑94 (MQ=60)
CCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGAC < SRR4302540.7605045/94‑1 (MQ=60)
CGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACA < SRR4302540.10107904/94‑1 (MQ=60)
GAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACAG > SRR4302540.5514342/1‑94 (MQ=60)
GAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACAG > SRR4302540.5513756/1‑94 (MQ=60)
GAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACAG > SRR4302540.9367706/1‑94 (MQ=60)
GAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACAG > SRR4302540.7397677/1‑94 (MQ=60)
GAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCGCCCGCCGGAACAGTTCCGGTCCCCGTGcaag > SRR4302540.5514343/1‑90 (MQ=60)
TCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACAGCAG < SRR4302540.3623967/94‑1 (MQ=60)
|
CATACCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAACCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACAGCAG > NC_000913/1611925‑1612111
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
