Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,616,549 |
A→G |
S128S (AGT→AGC) |
ydeB ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,616,549 | 0 | A | G | 99.5%
| 662.3
/ ‑4.8
| 204 | S128S (AGT→AGC) | ydeB | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (104/99); minor base T (1/0); total (105/99) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01 |
Only 100 of 209 total aligned reads displayed.
AACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAAT > NC_000913/1616459‑1616638
|
aaCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCt > 1:7155889/1‑93 (MQ=255)
aCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCtt < 2:6719392/93‑1 (MQ=255)
aTCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGc > 2:5657868/1‑93 (MQ=255)
tCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCCCTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCa < 1:139649/93‑1 (MQ=255)
tCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCa < 1:6106875/93‑1 (MQ=255)
tCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCa < 1:7932462/93‑1 (MQ=255)
tCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCa > 2:4256540/1‑93 (MQ=255)
tCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCa < 2:4290604/93‑1 (MQ=255)
cAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCAt > 1:3526711/1‑93 (MQ=255)
cAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCACTATGGTTCCCGGACCGGCAGTGCTTGGCAt > 2:907669/1‑93 (MQ=255)
aGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCAtt < 2:6235538/93‑1 (MQ=255)
tACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGc < 2:3982569/93‑1 (MQ=255)
tACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGc > 2:5177963/1‑93 (MQ=255)
aCCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGcc < 1:3106185/93‑1 (MQ=255)
cccAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCa > 1:6423548/1‑93 (MQ=255)
aaTCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCg < 1:8914210/93‑1 (MQ=255)
aTCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGGCAGCgg > 2:2453818/1‑93 (MQ=255)
aTCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCgg > 1:7498659/1‑93 (MQ=255)
tCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCgca > 2:8859865/1‑91 (MQ=255)
tCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGc > 1:2835613/1‑93 (MQ=255)
cAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGca < 2:2403699/93‑1 (MQ=255)
gCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGcaca > 2:7649791/1‑93 (MQ=255)
aaGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAg > 2:5106087/1‑93 (MQ=255)
aaGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAg > 1:7615001/1‑93 (MQ=255)
aaGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGCAATTGCCAGCGGCACAAAg > 1:3277165/1‑93 (MQ=255)
gTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCa < 1:1016812/93‑1 (MQ=255)
gAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAata > 1:9945849/1‑93 (MQ=255)
aaCTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAatat < 1:6873388/93‑1 (MQ=255)
aaCTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAatat > 2:913555/1‑93 (MQ=255)
aCTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATAtt < 2:5382648/93‑1 (MQ=255)
ctctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTg > 1:2098655/1‑93 (MQ=255)
ctctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCCGCACAAAGGCAATATTg > 2:753441/1‑93 (MQ=255)
tctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTgg < 2:4083888/93‑1 (MQ=255)
tctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTgg < 2:5911046/93‑1 (MQ=255)
ctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGc < 2:1547910/93‑1 (MQ=255)
ctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGc > 2:3404402/1‑93 (MQ=255)
ctGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGc > 2:7362310/1‑93 (MQ=255)
tGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCTCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCa < 1:620434/93‑1 (MQ=255)
gACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTCCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAc < 1:6985164/93‑1 (MQ=255)
aCGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAcc > 2:1757044/1‑92 (MQ=255)
aCGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAcc > 1:1984754/1‑92 (MQ=255)
gCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCgg < 1:3808725/93‑1 (MQ=255)
ccACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCgg < 2:5552647/92‑1 (MQ=255)
aCTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGt < 2:8179734/93‑1 (MQ=255)
cTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGtt < 2:3987924/93‑1 (MQ=255)
tgtgGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTTCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGtcc > 2:8491046/1‑91 (MQ=255)
gtgGACGCCGAGCTAATAATCATCGGTATGGTTCCCAGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCa > 2:2867789/1‑93 (MQ=255)
gtgGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCa > 2:5043361/1‑93 (MQ=255)
gtgGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCa < 2:6543401/93‑1 (MQ=255)
tgGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCAt < 1:5822594/93‑1 (MQ=255)
aCGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCtt < 1:4124397/93‑1 (MQ=255)
aCGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCtt < 1:5284179/93‑1 (MQ=255)
cGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTc > 2:4681336/1‑93 (MQ=255)
gCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTcc < 1:4772465/93‑1 (MQ=255)
gCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTcc > 2:9200005/1‑93 (MQ=255)
ccGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCa < 1:2282677/93‑1 (MQ=255)
ccGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCa < 2:3223817/93‑1 (MQ=255)
ccGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCa < 2:3094938/93‑1 (MQ=255)
cGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAg < 1:9520115/93‑1 (MQ=255)
gAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGc > 2:2622960/1‑93 (MQ=255)
gAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGc > 2:2745641/1‑93 (MQ=255)
aGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGct > 1:1217761/1‑93 (MQ=255)
gCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctc > 1:6593571/1‑93 (MQ=255)
gCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctc > 2:7577340/1‑93 (MQ=255)
gCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctc < 2:44959/93‑1 (MQ=255)
cTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctct < 1:6270108/93‑1 (MQ=255)
cTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctct > 1:7451504/1‑93 (MQ=255)
cTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctct > 2:4835336/1‑93 (MQ=255)
aataatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTc > 2:9202709/1‑93 (MQ=255)
aataatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTc > 1:4429586/1‑93 (MQ=255)
taatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCg > 1:9074154/1‑93 (MQ=255)
taatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCg > 1:8188930/1‑93 (MQ=255)
aatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGGTCATCTTCCAGCTCTTCCGa > 1:4983033/1‑93 (MQ=255)
tcatcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACt > 2:9575984/1‑93 (MQ=255)
atcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTg > 1:1595907/1‑93 (MQ=255)
tcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTgt > 1:8607592/1‑92 (MQ=255)
tcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGc > 2:7147076/1‑93 (MQ=255)
cGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCt < 1:1314840/93‑1 (MQ=255)
gCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCtt > 2:6123279/1‑93 (MQ=255)
cTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCttt < 1:2247522/93‑1 (MQ=255)
cTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCttt > 1:2928202/1‑93 (MQ=255)
cTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCttt < 2:2543050/93‑1 (MQ=255)
tATGGTTCCCGGACCGGCAGTGCTTTGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCtttt > 1:8459643/1‑93 (MQ=255)
tATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCtttt < 1:7726656/93‑1 (MQ=255)
tATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCtttt > 2:8395524/1‑93 (MQ=255)
aTGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTc > 2:8637013/1‑93 (MQ=255)
tGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCg > 2:9797714/1‑93 (MQ=255)
tCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTc < 1:7806400/93‑1 (MQ=255)
tCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTc < 1:6541451/93‑1 (MQ=255)
tCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTc < 1:3994273/93‑1 (MQ=255)
ggACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCTCCTCCCGt > 2:6822900/1‑93 (MQ=255)
gACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTg < 2:3072628/93‑1 (MQ=255)
aCCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGa < 1:5139884/93‑1 (MQ=255)
cGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaat > 2:2674392/1‑93 (MQ=255)
cGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaat > 2:2040093/1‑93 (MQ=255)
ggCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatc < 2:9290517/93‑1 (MQ=255)
gCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatca < 1:7311970/93‑1 (MQ=255)
cAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaa > 1:9698541/1‑93 (MQ=255)
aGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaat < 2:8283690/93‑1 (MQ=255)
aGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaat < 1:2772863/93‑1 (MQ=255)
|
AACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAAT > NC_000913/1616459‑1616638
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCT > NC_000913/1616458‑1616642
|
CAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCT < SRR4302540.4217962/94‑1 (MQ=60)
CAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCT > SRR4302540.7235643/1‑94 (MQ=60)
TCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCCCTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCAT < SRR4302540.141107/94‑1 (MQ=60)
TCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCAT > SRR4302540.3565175/1‑94 (MQ=60)
TCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCAT < SRR4302540.8024922/94‑1 (MQ=60)
TCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCAT < SRR4302540.6174892/94‑1 (MQ=60)
AGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTG > SRR4302540.6708792/1‑94 (MQ=60)
GTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGC > SRR4302540.5407386/1‑94 (MQ=60)
GTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGC < SRR4302540.2269571/94‑1 (MQ=60)
TACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCC < SRR4302540.2525761/94‑1 (MQ=60)
ACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCA > SRR4302540.6495046/1‑94 (MQ=60)
ACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCA < SRR4302540.3140187/94‑1 (MQ=60)
CCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAG < SRR4302540.7794806/94‑1 (MQ=60)
CCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGC < SRR4302540.4904016/94‑1 (MQ=60)
CAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCG > SRR4302540.2279323/1‑94 (MQ=60)
AATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGCCCGGCAGTGCTGGGCCTTGCCAGCGG > SRR4302540.4758421/1‑94 (MQ=60)
AATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCGTTGCCAGCGG > SRR4302540.7582443/1‑94 (MQ=60)
AATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGG < SRR4302540.9017445/94‑1 (MQ=60)
AATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGG > SRR4302540.7582441/1‑94 (MQ=60)
ATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGC > SRR4302540.2866283/1‑94 (MQ=60)
ATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGAGGC > SRR4302540.2866282/1‑94 (MQ=60)
TCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCA < SRR4302540.1733882/94‑1 (MQ=60)
AGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACA > SRR4302540.6959548/1‑94 (MQ=60)
GAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAG > SRR4302540.7700608/1‑94 (MQ=60)
GAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGCAATTGCCAGCGGCACAAAG > SRR4302540.3312956/1‑94 (MQ=60)
AAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGG > SRR4302540.8017791/1‑94 (MQ=60)
AAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGG > SRR4302540.2988506/1‑94 (MQ=60)
AGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGC < SRR4302540.5934731/94‑1 (MQ=60)
AGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGC < SRR4302540.9879654/94‑1 (MQ=60)
GGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCA < SRR4302540.5646425/94‑1 (MQ=60)
GGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCA > SRR4302540.7561962/1‑94 (MQ=60)
GTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAA < SRR4302540.1027117/94‑1 (MQ=60)
TGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATA > SRR4302540.10061987/1‑94 (MQ=60)
TGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATA > SRR4302540.8460323/1‑94 (MQ=60)
TGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATA > SRR4302540.5062316/1‑94 (MQ=60)
AACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATT < SRR4302540.6949570/94‑1 (MQ=60)
ACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTG > SRR4302540.2121187/1‑94 (MQ=60)
ACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTG < SRR4302540.8691784/94‑1 (MQ=60)
CTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGG < SRR4302540.1200957/94‑1 (MQ=60)
CTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCA < SRR4302540.7101183/94‑1 (MQ=60)
TGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCTCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAC < SRR4302540.627038/94‑1 (MQ=60)
TGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAC < SRR4302540.627040/94‑1 (MQ=60)
GACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACC > SRR4302540.320923/1‑94 (MQ=60)
GACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACC > SRR4302540.2006269/1‑94 (MQ=60)
GACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTCCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACC < SRR4302540.7062727/94‑1 (MQ=60)
GCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGG < SRR4302540.3850206/94‑1 (MQ=60)
ACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTT > SRR4302540.2928197/1‑94 (MQ=60)
CTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTC < SRR4302540.10098585/94‑1 (MQ=60)
TGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCA > SRR4302540.8239496/1‑94 (MQ=60)
GTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCAT > SRR4302540.9713978/1‑94 (MQ=60)
TGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATC < SRR4302540.5886954/94‑1 (MQ=60)
GCGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGGGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTC < SRR4302540.3772364/94‑1 (MQ=60)
ACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTC < SRR4302540.4168944/94‑1 (MQ=60)
ACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTC < SRR4302540.4168943/94‑1 (MQ=60)
ACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTC < SRR4302540.5341920/94‑1 (MQ=60)
CGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCC > SRR4302540.1564279/1‑94 (MQ=60)
GCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCA < SRR4302540.4823451/94‑1 (MQ=60)
CCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAG < SRR4302540.2307206/94‑1 (MQ=60)
CCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAG < SRR4302540.7483795/94‑1 (MQ=60)
CGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGC > SRR4302540.7283858/1‑94 (MQ=60)
CGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGC < SRR4302540.9632858/94‑1 (MQ=60)
GAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCT > SRR4302540.1230229/1‑94 (MQ=60)
GAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCT > SRR4302540.1295384/1‑94 (MQ=60)
AGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTC > SRR4302540.3038722/1‑94 (MQ=60)
AGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTC > SRR4302540.6666593/1‑94 (MQ=60)
GCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCT > SRR4302540.7534566/1‑94 (MQ=60)
CTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTT < SRR4302540.6339869/94‑1 (MQ=60)
CTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTT < SRR4302540.6339868/94‑1 (MQ=60)
TAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTC > SRR4302540.4477583/1‑94 (MQ=60)
AATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCC < SRR4302540.385703/94‑1 (MQ=60)
ATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCG > SRR4302540.9183131/1‑94 (MQ=60)
ATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCG > SRR4302540.8284071/1‑94 (MQ=60)
TAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGGTCATCTTCCAGCTCTTCCGA > SRR4302540.5036982/1‑94 (MQ=60)
CATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTG > SRR4302540.1613345/1‑94 (MQ=60)
CATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTG > SRR4302540.5233842/1‑94 (MQ=60)
ATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGT > SRR4302540.8707616/1‑94 (MQ=60)
ATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGC > SRR4302540.8994681/1‑94 (MQ=60)
CGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTT < SRR4302540.1328514/94‑1 (MQ=60)
CGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTT < SRR4302540.1328515/94‑1 (MQ=60)
CGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTT < SRR4302540.9475292/94‑1 (MQ=60)
CGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTT < SRR4302540.6654200/94‑1 (MQ=60)
GCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTT < SRR4302540.7875724/94‑1 (MQ=60)
GCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTT > SRR4302540.2960310/1‑94 (MQ=60)
CTATGGTTCCCGGACCGGCAGTGCTTTGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTT > SRR4302540.8557863/1‑94 (MQ=60)
CTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTT < SRR4302540.2271663/94‑1 (MQ=60)
TATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTC < SRR4302540.7816847/94‑1 (MQ=60)
TATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGATTTTC < SRR4302540.3400456/94‑1 (MQ=60)
ATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCG < SRR4302540.2085160/94‑1 (MQ=60)
GGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCC > SRR4302540.4435951/1‑94 (MQ=60)
TTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTC > SRR4302540.9458115/1‑94 (MQ=60)
TCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCC < SRR4302540.7897622/94‑1 (MQ=60)
TCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCC < SRR4302540.6614040/94‑1 (MQ=60)
TCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCC < SRR4302540.4037259/94‑1 (MQ=60)
TCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCC < SRR4302540.6614039/94‑1 (MQ=60)
CGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGT > SRR4302540.7413755/1‑94 (MQ=60)
CGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGT < SRR4302540.9037296/94‑1 (MQ=60)
ACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAA < SRR4302540.5195561/94‑1 (MQ=60)
GGCAGTGCTTGGCATTGCAAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCttctcgttaatca > SRR4302540.6720385/1‑81 (MQ=60)
GCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAA > SRR4302540.9812569/1‑94 (MQ=60)
GCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAA < SRR4302540.7393613/94‑1 (MQ=60)
GCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAA < SRR4302540.6263294/94‑1 (MQ=60)
AGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATC < SRR4302540.2802823/94‑1 (MQ=60)
AGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATC > SRR4302540.347271/1‑94 (MQ=60)
AGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATC > SRR4302540.6076776/1‑94 (MQ=60)
GTGCTTGGCATTGCCAGCGGCACAATGGCAATATTGGCACCGGGTTCAGCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCG < SRR4302540.3003688/94‑1 (MQ=60)
GTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCG > SRR4302540.8101488/1‑94 (MQ=60)
TGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGC < SRR4302540.896368/94‑1 (MQ=60)
GCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCT > SRR4302540.7452050/1‑94 (MQ=60)
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CAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCT > NC_000913/1616458‑1616642
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
