Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,616,587 |
T→C |
S116G (AGT→GGT) |
ydeB ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,616,587 | 0 | T | C | 100.0%
| 726.9
/ NA
| 227 | S116G (AGT→GGT) | ydeB | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (122/105); total (122/105) |
Only 100 of 236 total aligned reads displayed.
GCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACG > NC_000913/1616497‑1616679
|
ccACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCgg < 2:5552647/92‑1 (MQ=255)
aCTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGt > 2:4131645/1‑93 (MQ=255)
cTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGtt > 1:2896611/1‑93 (MQ=255)
cTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGtt < 2:3987924/93‑1 (MQ=255)
tgtgGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTTCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGtcc > 2:8491046/1‑91 (MQ=255)
gtgGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCa < 2:6543401/93‑1 (MQ=255)
tgGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCAt > 1:9600721/1‑93 (MQ=255)
tgGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCAt < 1:5822594/93‑1 (MQ=255)
gACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCt < 2:4299548/93‑1 (MQ=255)
gcGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGGGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCtt < 1:3731652/92‑1 (MQ=255)
aCGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCtt < 1:4124397/93‑1 (MQ=255)
ccGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCa < 1:7401338/93‑1 (MQ=255)
ccGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCa < 2:3094938/93‑1 (MQ=255)
ccGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCa < 2:3223817/93‑1 (MQ=255)
gAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGc > 2:2745641/1‑93 (MQ=255)
gAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGc > 2:2622960/1‑93 (MQ=255)
aGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGct > 1:1217761/1‑93 (MQ=255)
gCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctc < 2:44959/93‑1 (MQ=255)
gCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctc < 2:4934171/93‑1 (MQ=255)
gCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctc > 1:6593571/1‑93 (MQ=255)
cTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctct > 2:8379712/1‑93 (MQ=255)
cTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctct < 1:6270109/93‑1 (MQ=255)
aataatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTc > 1:4429586/1‑93 (MQ=255)
aataatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTc > 2:9202708/1‑93 (MQ=255)
ataatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTcc < 2:541448/93‑1 (MQ=255)
taatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCg > 2:5645708/1‑93 (MQ=255)
taatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCg > 1:8188930/1‑93 (MQ=255)
aatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGGTCATCTTCCAGCTCTTCCGa > 1:4983033/1‑93 (MQ=255)
atcatcGCTATGGTTCCCGTACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGAc > 2:9911900/1‑93 (MQ=255)
atcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTg > 1:1595907/1‑93 (MQ=255)
atcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTg > 1:5177491/1‑93 (MQ=255)
tcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGc > 2:7147076/1‑93 (MQ=255)
cGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCt < 1:1314840/93‑1 (MQ=255)
gCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCtt < 1:7784734/93‑1 (MQ=255)
cTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCttt < 2:2543049/93‑1 (MQ=255)
tATGGTTCCCGGACCGGCAGTGCTTTGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCtttt > 1:8459643/1‑93 (MQ=255)
tATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGAtttt < 1:3363646/93‑1 (MQ=255)
aTGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTc > 2:8637013/1‑93 (MQ=255)
aTGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTc < 1:2062962/93‑1 (MQ=255)
tGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCg > 2:9797714/1‑93 (MQ=255)
tGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCg > 2:5106028/1‑93 (MQ=255)
tCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTc < 1:3994273/93‑1 (MQ=255)
tCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTc < 1:6541451/93‑1 (MQ=255)
tCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTc < 2:2278492/93‑1 (MQ=255)
tCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTc > 1:9346774/1‑93 (MQ=255)
ccGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCg > 2:3598291/1‑93 (MQ=255)
cGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCgg < 1:8932931/93‑1 (MQ=255)
ggACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGt > 1:7331908/1‑93 (MQ=255)
gACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTg > 2:9689834/1‑93 (MQ=255)
aCCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGa < 2:6757514/93‑1 (MQ=255)
ccagCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaa > 2:1867282/4‑93 (MQ=255)
cGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaat < 2:9191631/93‑1 (MQ=255)
cGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaat > 2:2674392/1‑93 (MQ=255)
ggCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatc < 2:9290517/93‑1 (MQ=255)
gCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatca < 1:6194328/93‑1 (MQ=255)
cAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaa > 1:9698541/1‑93 (MQ=255)
aGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaat < 1:2772863/93‑1 (MQ=255)
aGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaat < 2:8283690/93‑1 (MQ=255)
gtgcTTGGCATTGCCAGCGGCACAATGGCAATATTGGCACCGGGTTCAGCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaatc < 1:2970875/90‑1 (MQ=255)
gtgcTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaatc > 1:343780/4‑93 (MQ=255)
gtgcTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaatc < 2:9432631/90‑1 (MQ=255)
tgcTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCg > 1:8008311/3‑93 (MQ=255)
gcTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGc > 2:6096877/2‑93 (MQ=255)
ttGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCtt < 2:10012640/93‑1 (MQ=255)
ttGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCtt < 2:6142024/93‑1 (MQ=255)
ttGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCtt > 2:4581366/1‑93 (MQ=255)
ttGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCtt < 2:6117044/93‑1 (MQ=255)
ttGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCtt < 1:7821868/93‑1 (MQ=255)
tGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCttt > 1:1796996/1‑93 (MQ=255)
tGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCttt > 2:1990016/1‑93 (MQ=255)
gCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCt > 1:6733462/1‑93 (MQ=255)
gCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCt < 2:8871487/93‑1 (MQ=255)
cttGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCATCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGt < 2:7788376/92‑1 (MQ=255)
aTTGCCAGCGGCACAAAGGCAATATTTGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGt > 1:1154792/1‑93 (MQ=255)
ttGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGtt > 2:5989416/1‑93 (MQ=255)
ttGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGtt > 1:7298564/1‑93 (MQ=255)
ttGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGtt < 1:990868/93‑1 (MQ=255)
ttGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGtt < 1:5519618/93‑1 (MQ=255)
tGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTg < 2:2517902/93‑1 (MQ=255)
gCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGc < 2:9492629/93‑1 (MQ=255)
gCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGc < 2:276504/93‑1 (MQ=255)
ccAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCg < 2:2913286/93‑1 (MQ=255)
cAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCgg < 2:1634725/93‑1 (MQ=255)
agtcgCACAAAGGCAGTATTGGCACCGGGTTCATCTTCCAGCTCTTCCGATTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTTTGTTGCGGa < 1:9416680/89‑1 (MQ=255)
ggCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAag > 1:8791453/1‑93 (MQ=255)
gCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAaga < 2:6568820/93‑1 (MQ=255)
acaAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGc < 2:698565/93‑1 (MQ=255)
acaAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGc > 2:3050463/1‑93 (MQ=255)
caAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCa < 2:4693536/93‑1 (MQ=255)
caAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCa > 2:2045720/1‑93 (MQ=255)
aaGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATc > 1:3869323/1‑93 (MQ=255)
aaGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATc < 1:7170299/93‑1 (MQ=255)
aaGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATc > 2:8769775/1‑93 (MQ=255)
aGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATcc > 1:6993771/1‑93 (MQ=255)
atatTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGaaaa < 2:5269637/93‑1 (MQ=255)
tatTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGCAAAc > 1:8882523/1‑93 (MQ=255)
tatTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAAc > 1:4369890/1‑93 (MQ=255)
tGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGa < 2:483795/93‑1 (MQ=255)
ggCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGAt < 2:1652795/93‑1 (MQ=255)
ggCACCCGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGAt < 2:7876117/93‑1 (MQ=255)
|
GCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACG > NC_000913/1616497‑1616679
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGC > NC_000913/1616494‑1616680
|
GACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACC > SRR4302540.2006269/1‑94 (MQ=60)
GACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACC > SRR4302540.320923/1‑94 (MQ=60)
GACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTCCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACC < SRR4302540.7062727/94‑1 (MQ=60)
GCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGG < SRR4302540.3850206/94‑1 (MQ=60)
ACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTT > SRR4302540.2928197/1‑94 (MQ=60)
CTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTC < SRR4302540.10098585/94‑1 (MQ=60)
TGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCA > SRR4302540.8239496/1‑94 (MQ=60)
GTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCAT > SRR4302540.9713978/1‑94 (MQ=60)
TGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATC < SRR4302540.5886954/94‑1 (MQ=60)
GCGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGGGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTC < SRR4302540.3772364/94‑1 (MQ=60)
ACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTC < SRR4302540.5341920/94‑1 (MQ=60)
ACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTC < SRR4302540.4168944/94‑1 (MQ=60)
ACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTC < SRR4302540.4168943/94‑1 (MQ=60)
CGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCC > SRR4302540.1564279/1‑94 (MQ=60)
GCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCA < SRR4302540.4823451/94‑1 (MQ=60)
CCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAG < SRR4302540.2307206/94‑1 (MQ=60)
CCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAG < SRR4302540.7483795/94‑1 (MQ=60)
CGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGC > SRR4302540.7283858/1‑94 (MQ=60)
CGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGC < SRR4302540.9632858/94‑1 (MQ=60)
GAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCT > SRR4302540.1295384/1‑94 (MQ=60)
GAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCT > SRR4302540.1230229/1‑94 (MQ=60)
AGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTC > SRR4302540.6666593/1‑94 (MQ=60)
AGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTC > SRR4302540.3038722/1‑94 (MQ=60)
GCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCT > SRR4302540.7534566/1‑94 (MQ=60)
CTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTT < SRR4302540.6339868/94‑1 (MQ=60)
CTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTT < SRR4302540.6339869/94‑1 (MQ=60)
TAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTC > SRR4302540.4477583/1‑94 (MQ=60)
AATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCC < SRR4302540.385703/94‑1 (MQ=60)
ATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCG > SRR4302540.8284071/1‑94 (MQ=60)
ATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCG > SRR4302540.9183131/1‑94 (MQ=60)
TAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGGTCATCTTCCAGCTCTTCCGA > SRR4302540.5036982/1‑94 (MQ=60)
CATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTG > SRR4302540.1613345/1‑94 (MQ=60)
CATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTG > SRR4302540.5233842/1‑94 (MQ=60)
ATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGT > SRR4302540.8707616/1‑94 (MQ=60)
ATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGC > SRR4302540.8994681/1‑94 (MQ=60)
CGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTT < SRR4302540.1328514/94‑1 (MQ=60)
CGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTT < SRR4302540.6654200/94‑1 (MQ=60)
CGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTT < SRR4302540.1328515/94‑1 (MQ=60)
CGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTT < SRR4302540.9475292/94‑1 (MQ=60)
GCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTT < SRR4302540.7875724/94‑1 (MQ=60)
GCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTT > SRR4302540.2960310/1‑94 (MQ=60)
CTATGGTTCCCGGACCGGCAGTGCTTTGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTT > SRR4302540.8557863/1‑94 (MQ=60)
CTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTT < SRR4302540.2271663/94‑1 (MQ=60)
TATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTC < SRR4302540.7816847/94‑1 (MQ=60)
TATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGATTTTC < SRR4302540.3400456/94‑1 (MQ=60)
ATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCG < SRR4302540.2085160/94‑1 (MQ=60)
GGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCC > SRR4302540.4435951/1‑94 (MQ=60)
TTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTC > SRR4302540.9458115/1‑94 (MQ=60)
TCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCC < SRR4302540.4037259/94‑1 (MQ=60)
TCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCC < SRR4302540.6614040/94‑1 (MQ=60)
TCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCC < SRR4302540.6614039/94‑1 (MQ=60)
TCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCC < SRR4302540.7897622/94‑1 (MQ=60)
CGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGT > SRR4302540.7413755/1‑94 (MQ=60)
CGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGT < SRR4302540.9037296/94‑1 (MQ=60)
ACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAA < SRR4302540.5195561/94‑1 (MQ=60)
GGCAGTGCTTGGCATTGCAAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCttctcgttaatca > SRR4302540.6720385/1‑81 (MQ=60)
GCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAA < SRR4302540.7393613/94‑1 (MQ=60)
GCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAA > SRR4302540.9812569/1‑94 (MQ=60)
GCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAA < SRR4302540.6263294/94‑1 (MQ=60)
AGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATC > SRR4302540.6076776/1‑94 (MQ=60)
AGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATC > SRR4302540.347271/1‑94 (MQ=60)
AGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATC < SRR4302540.2802823/94‑1 (MQ=60)
GTGCTTGGCATTGCCAGCGGCACAATGGCAATATTGGCACCGGGTTCAGCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCG < SRR4302540.3003688/94‑1 (MQ=60)
GTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCG > SRR4302540.8101488/1‑94 (MQ=60)
TGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGC < SRR4302540.896368/94‑1 (MQ=60)
GCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCT > SRR4302540.7452050/1‑94 (MQ=60)
TTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTT > SRR4302540.1816544/1‑94 (MQ=60)
TTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTT > SRR4302540.1816545/1‑94 (MQ=60)
TTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTT < SRR4302540.4308396/94‑1 (MQ=60)
TTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTT < SRR4302540.7913278/94‑1 (MQ=60)
GGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCT > SRR4302540.6807821/1‑94 (MQ=60)
CATTGCCAGCGGCACAAAGGCAATATTTGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGT > SRR4302540.1166809/1‑94 (MQ=60)
CATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGT < SRR4302540.3929001/94‑1 (MQ=60)
CATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGT > SRR4302540.2883927/1‑94 (MQ=60)
CATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGT < SRR4302540.6879901/94‑1 (MQ=60)
tgTGCCAGAGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTT < SRR4302540.8450312/92‑1 (MQ=60)
ATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTT > SRR4302540.7380026/1‑94 (MQ=60)
TTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTG < SRR4302540.1000979/94‑1 (MQ=60)
TTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTG > SRR4302540.7244402/1‑94 (MQ=60)
TTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTG < SRR4302540.5580407/94‑1 (MQ=60)
TTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCGTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTG > SRR4302540.9791184/1‑94 (MQ=60)
GCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGGGAATCAATCGCTTTCTGTTGCG > SRR4302540.2025359/1‑94 (MQ=60)
agtcGCACAAAGGCAGTATTGGCACCGGGTTCATCTTCCAGCTCTTCCGATTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTTTGTTGCGGAA < SRR4302540.9528619/90‑1 (MQ=60)
AGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAA < SRR4302540.117517/94‑1 (MQ=60)
CGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAG > SRR4302540.9074593/1‑94 (MQ=60)
CGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAG > SRR4302540.8893157/1‑94 (MQ=60)
GCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAG > SRR4302540.8059574/1‑94 (MQ=60)
CACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGC < SRR4302540.6687297/94‑1 (MQ=60)
CACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGC < SRR4302540.6687298/94‑1 (MQ=60)
CACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGC > SRR4302540.9735147/1‑94 (MQ=60)
ACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCA < SRR4302540.9905497/94‑1 (MQ=60)
CAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCAT < SRR4302540.4607645/94‑1 (MQ=60)
AAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATC > SRR4302540.3911384/1‑94 (MQ=60)
AAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCC < SRR4302540.4113861/94‑1 (MQ=60)
AAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCC < SRR4302540.7250226/94‑1 (MQ=60)
AAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCC > SRR4302540.7071393/1‑94 (MQ=60)
GGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGA > SRR4302540.3751705/1‑94 (MQ=60)
AATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAA < SRR4302540.307464/94‑1 (MQ=60)
AATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAA > SRR4302540.5620977/1‑94 (MQ=60)
ATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGCAAAC > SRR4302540.8985325/1‑94 (MQ=60)
ATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAAC > SRR4302540.8985324/1‑94 (MQ=60)
ATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAAC > SRR4302540.3449418/1‑94 (MQ=60)
ATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAAC > SRR4302540.7320666/1‑94 (MQ=60)
ATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAAC > SRR4302540.4417366/1‑94 (MQ=60)
TATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACC > SRR4302540.8162312/1‑94 (MQ=60)
TATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACC > SRR4302540.5618832/1‑94 (MQ=60)
TTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGA > SRR4302540.6509487/1‑94 (MQ=60)
CACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAA > SRR4302540.461312/1‑94 (MQ=60)
ACCGGGTTCATCTTCCAGCTCTTCCGGCTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAAC < SRR4302540.5440202/94‑1 (MQ=60)
ACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAAC < SRR4302540.1206244/94‑1 (MQ=60)
ACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAAC > SRR4302540.2380482/1‑94 (MQ=60)
ACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAAC > SRR4302540.4711454/1‑94 (MQ=60)
ACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAAC > SRR4302540.9968827/1‑94 (MQ=60)
CGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGC > SRR4302540.8484699/1‑94 (MQ=60)
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GACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGC > NC_000913/1616494‑1616680
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
