Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,620,798 Δ1 bp intergenic (+255/+186) ydeF → / ← ydeH putative transport protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,620,7950C.99.7% 1271.6 / ‑3.6 282intergenic (+252/+189)ydeF/ydeHputative transport protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base . (151/130);  total (152/130)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.90e-01

Only 100 of 344 total aligned reads displayed.

CTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGAT  >  NC_000913/1620703‑1620883
                                                                                            |                                                                                        
cTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGc                                                                                          >  1:7954831/1‑93 (MQ=255)
cTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGc                                                                                          >  1:3154721/1‑93 (MQ=255)
  gggAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGccc                                                                                        >  2:5102041/1‑93 (MQ=255)
   ggAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGccct                                                                                       >  2:1454147/1‑92 (MQ=255)
   ggAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGccct                                                                                       <  1:1696482/93‑2 (MQ=255)
    gAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGccctt                                                                                      >  1:4390181/1‑91 (MQ=255)
     aataatTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGcccttg                                                                                     <  1:5692559/93‑4 (MQ=255)
     aataatTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGcccttg                                                                                     <  1:4051588/93‑4 (MQ=255)
     aataatTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGcccttg                                                                                     >  2:6928265/1‑90 (MQ=255)
      ataatTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGcccttgt                                                                                    <  2:5949759/93‑5 (MQ=255)
       taatTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGtt                                                                                  >  2:4872312/1‑93 (MQ=255)
        tattttattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTa                                                                                 <  2:7720808/92‑1 (MQ=255)
        aatTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTa                                                                                 >  1:8914622/1‑93 (MQ=255)
        aatTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTa                                                                                 >  2:2186503/1‑93 (MQ=255)
         attttattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTAc                                                                                >  2:8062840/1‑93 (MQ=255)
         attttattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTAc                                                                                <  1:212453/93‑1 (MQ=255)
          ttttattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACa                                                                               <  2:6738532/93‑1 (MQ=255)
          ttttattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACa                                                                               <  2:3078233/93‑1 (MQ=255)
          ttttattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACa                                                                               >  1:1959255/1‑93 (MQ=255)
           tttattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAg                                                                              >  2:2007607/1‑93 (MQ=255)
             tattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGtt                                                                            >  2:7868484/1‑93 (MQ=255)
              attttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTtg                                                                           <  2:2299159/93‑1 (MQ=255)
                  tctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTa                                                                       <  1:2844155/93‑1 (MQ=255)
                   ctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTAc                                                                      <  2:8765131/93‑1 (MQ=255)
                   ctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTAc                                                                      >  1:6970844/1‑93 (MQ=255)
                   ctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTAc                                                                      <  1:3558990/93‑1 (MQ=255)
                   ctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTAc                                                                      >  2:232735/1‑93 (MQ=255)
                      gttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAg                                                                   <  1:6191491/93‑1 (MQ=255)
                      gttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAg                                                                   <  2:5575085/93‑1 (MQ=255)
                       gtgtctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAgg                                                                  <  1:1644168/90‑1 (MQ=255)
                         ttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAgggg                                                                <  1:9386837/93‑1 (MQ=255)
                          tctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGc                                                               <  2:2709104/93‑1 (MQ=255)
                          tctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGCGTACAAGGGGc                                                               <  1:1901453/93‑1 (MQ=255)
                            tggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCt                                                             >  1:7482553/1‑93 (MQ=255)
                               ccGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAACCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGAt                                                          >  1:3672060/1‑93 (MQ=255)
                                   gTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGAttttt                                                      >  2:8398694/1‑93 (MQ=255)
                                   gTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGAttttt                                                      >  2:1587356/1‑93 (MQ=255)
                                   gTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGAttttt                                                      <  2:5266102/93‑1 (MQ=255)
                                   gTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGAttttt                                                      <  2:3983968/93‑1 (MQ=255)
                                    tATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTa                                                     >  1:1175900/1‑93 (MQ=255)
                                    tATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTa                                                     >  2:9293293/1‑93 (MQ=255)
                                     aTTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTAt                                                    <  1:8390827/93‑1 (MQ=255)
                                     aTTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTAt                                                    >  2:2453695/1‑93 (MQ=255)
                                      tttCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATg                                                   >  1:7176413/1‑93 (MQ=255)
                                      tttCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATg                                                   >  1:6058780/1‑93 (MQ=255)
                                       ttCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGATACAGTTGTGTACAAGGGGCCTGATTTTTATGa                                                  >  1:9680639/1‑93 (MQ=255)
                                          aGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACgg                                               >  2:9622096/1‑93 (MQ=255)
                                           gCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGc                                              <  1:1351386/93‑1 (MQ=255)
                                             cacaAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGa                                            >  2:5443920/1‑93 (MQ=255)
                                             cacaAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGa                                            >  2:9189682/1‑93 (MQ=255)
                                                aaaTGGGATGACTAATGAACGGAGATAATCCCTAACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGaaaa                                         <  1:1649269/93‑1 (MQ=255)
                                                 aaTGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGaaaaa                                        >  2:4481245/1‑93 (MQ=255)
                                                  aTGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGaaaaaa                                       <  1:5188049/93‑1 (MQ=255)
                                                    gggATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGaaaaaaaa                                     >  1:7917816/1‑93 (MQ=255)
                                                      gATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAAcc                                   <  2:2116636/93‑1 (MQ=255)
                                                       aTGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCg                                  <  1:7293576/93‑1 (MQ=255)
                                                       aTGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCg                                  >  2:9015872/1‑93 (MQ=255)
                                                       aTGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCg                                  <  2:6607307/93‑1 (MQ=255)
                                                        tGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGc                                 >  2:7370699/1‑93 (MQ=255)
                                                        tGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGc                                 >  1:8478243/1‑93 (MQ=255)
                                                         gACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGcc                                <  2:7648916/93‑1 (MQ=255)
                                                          aCTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCa                               >  2:1575037/1‑93 (MQ=255)
                                                          aCTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCa                               <  1:5853643/93‑1 (MQ=255)
                                                           atAATGAAGGGAGATAACCCCTCACCTACCCGGCCTTTGTTACAGTGGGGTCCAGGGGGCTTGTTTTTTATGACGGCAAAAAAAAACCGCCAg                              <  2:3726807/92‑1 (MQ=255)
                                                           atAATGAACGGAGATAATCCCTCACCTACCCGGCCCTTGTTACAGTTGTGTACAGGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAg                              <  1:5461138/92‑1 (MQ=255)
                                                            tAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGt                             >  1:3806144/1‑93 (MQ=255)
                                                             aaTGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTa                            >  1:6392021/1‑93 (MQ=255)
                                                              aTGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTaa                           >  1:346114/1‑93 (MQ=255)
                                                                gAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACAGCGAAAAAAAACCGCCAGTAAAc                         >  1:8753456/1‑93 (MQ=255)
                                                                  aCGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcg                       >  1:5026008/1‑93 (MQ=255)
                                                                  aCGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcg                       <  2:1149864/93‑1 (MQ=255)
                                                                  aCGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcg                       >  2:1817099/1‑93 (MQ=255)
                                                                   cGGAGATAATCCCTCACCTACCCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcgg                      <  2:712660/93‑1 (MQ=255)
                                                                   cGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcgg                      <  1:4183221/93‑1 (MQ=255)
                                                                    ggAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcggc                     >  2:502121/1‑93 (MQ=255)
                                                                      agaTAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcggcgg                   >  1:6860197/1‑93 (MQ=255)
                                                                       gaTAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGt                  >  1:4635555/1‑93 (MQ=255)
                                                                       gaTAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATCACGGCGACAAAAAACCGCCAGTAACCcggcggg                  >  1:2495620/1‑92 (MQ=255)
                                                                        aTAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTg                 <  2:8549020/93‑1 (MQ=255)
                                                                        aTAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTg                 >  1:3228037/1‑93 (MQ=255)
                                                                         tAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGa                >  2:8428055/1‑93 (MQ=255)
                                                                          aaTCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGaa               <  2:9478367/93‑1 (MQ=255)
                                                                          aaTCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGaa               <  1:9762403/93‑1 (MQ=255)
                                                                          aaTCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGaa               <  1:5956541/93‑1 (MQ=255)
                                                                          aaTCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGaa               >  2:6316886/1‑93 (MQ=255)
                                                                            tCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGGGAATg             >  2:8144884/1‑93 (MQ=255)
                                                                            tCCCCCACCTAACCGTCCCTTGTTACATTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATg             <  2:5826679/93‑1 (MQ=255)
                                                                              ccTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCt           >  2:9866147/1‑93 (MQ=255)
                                                                              ccTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCt           <  1:8808261/93‑1 (MQ=255)
                                                                              ccTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCt           >  1:1722260/1‑93 (MQ=255)
                                                                              ccTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGCCCTGATTTTTATGACGGCAAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCt           <  1:122794/93‑1 (MQ=255)
                                                                               cTCACCTAACCGGCCCTTGTTACAGTTGGGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCACCAGTAAACCAGCAGGGAACGcat          >  2:5692809/1‑91 (MQ=255)
                                                                                   ccTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCAt      >  2:6535710/1‑93 (MQ=255)
                                                                                    cTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATg     <  1:2485076/93‑1 (MQ=255)
                                                                                     tAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATgg    >  2:7064280/1‑93 (MQ=255)
                                                                                     tAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATgg    >  1:6726988/1‑93 (MQ=255)
                                                                                     tAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATgg    >  1:6516122/1‑93 (MQ=255)
                                                                                     tAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATgg    >  2:9535827/1‑93 (MQ=255)
                                                                                      aaCCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGa   <  2:4166579/93‑1 (MQ=255)
                                                                                       aCCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGAt  >  2:7535546/1‑93 (MQ=255)
                                                                                            |                                                                                        
CTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGAT  >  NC_000913/1620703‑1620883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAGATTTGT  >  NC_000913/1620705‑1620891
                                                                                             |                                                                                              
GGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGTAGATAATCCCTCACCTAACCGGCCCT                                                                                                >  SRR4302540.8250768/1‑94 (MQ=60)
GGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCT                                                                                                <  SRR4302540.6143567/94‑1 (MQ=60)
GGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCT                                                                                                >  SRR4302540.191646/1‑94 (MQ=60)
GGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCT                                                                                                >  SRR4302540.1667793/1‑94 (MQ=60)
GGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCT                                                                                                <  SRR4302540.8834966/94‑1 (MQ=60)
 GGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTT                                                                                               <  SRR4302540.1714862/94‑1 (MQ=60)
 GGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTT                                                                                               >  SRR4302540.4437823/1‑94 (MQ=60)
  GAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTG                                                                                             <  SRR4302540.5720989/94‑1 (MQ=60)
   AATAATTTTATTTTCTGTTTGTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGT                                                                                           <  SRR4302540.10046795/94‑1 (MQ=60)
   AATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGT                                                                                           <  SRR4302540.9080699/94‑1 (MQ=60)
   AATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGT                                                                                           <  SRR4302540.4095270/94‑1 (MQ=60)
   AATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGT                                                                                           <  SRR4302540.5755230/94‑1 (MQ=60)
   AATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGT                                                                                           >  SRR4302540.9798931/1‑94 (MQ=60)
    ATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTT                                                                                          >  SRR4302540.887414/1‑94 (MQ=60)
    ATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTT                                                                                          >  SRR4302540.2517580/1‑94 (MQ=60)
    ATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTT                                                                                          >  SRR4302540.2445866/1‑94 (MQ=60)
    ATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTT                                                                                          >  SRR4302540.2429493/1‑94 (MQ=60)
     TAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTA                                                                                         >  SRR4302540.9017862/1‑94 (MQ=60)
     TAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTA                                                                                         >  SRR4302540.3684946/1‑94 (MQ=60)
      AATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTAC                                                                                        <  SRR4302540.62130/94‑1 (MQ=60)
       ATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACA                                                                                       <  SRR4302540.214534/94‑1 (MQ=60)
       ATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACA                                                                                       >  SRR4302540.4967629/1‑94 (MQ=60)
       ATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACA                                                                                       >  SRR4302540.1980550/1‑94 (MQ=60)
        TTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAG                                                                                      >  SRR4302540.6900569/1‑94 (MQ=60)
        TTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAG                                                                                      >  SRR4302540.5853548/1‑94 (MQ=60)
          TTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACCAATGGGATGACTAATGAACGGAGATAATCCCTCCCCTAACCGGCCCTTGTTACAGTT                                                                                    <  SRR4302540.8489733/94‑1 (MQ=60)
           TATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTG                                                                                   <  SRR4302540.6083444/94‑1 (MQ=60)
              TTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGT                                                                                <  SRR4302540.7731872/94‑1 (MQ=60)
              TTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGT                                                                                <  SRR4302540.9761451/94‑1 (MQ=60)
               TTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTA                                                                               >  SRR4302540.853284/1‑94 (MQ=60)
                TCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTAC                                                                              >  SRR4302540.6506531/1‑94 (MQ=60)
                TCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTAC                                                                              >  SRR4302540.7048327/1‑94 (MQ=60)
                TCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTAC                                                                              <  SRR4302540.2874932/94‑1 (MQ=60)
                TCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTAC                                                                              <  SRR4302540.885698/94‑1 (MQ=60)
                 TTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACA                                                                             <  SRR4302540.3570554/94‑1 (MQ=60)
                 CTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACA                                                                             <  SRR4302540.3597872/94‑1 (MQ=60)
                 CTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACA                                                                             >  SRR4302540.7606946/1‑94 (MQ=60)
                 CTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACA                                                                             >  SRR4302540.1725330/1‑94 (MQ=60)
                 CTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACA                                                                             >  SRR4302540.193127/1‑94 (MQ=60)
                  TGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAG                                                                            >  SRR4302540.1657198/1‑94 (MQ=60)
                  TGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAA                                                                            >  SRR4302540.701983/1‑94 (MQ=60)
                    GTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGG                                                                          <  SRR4302540.3527549/94‑1 (MQ=60)
                    GTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGG                                                                          <  SRR4302540.7231627/94‑1 (MQ=60)
                    GTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGG                                                                          <  SRR4302540.6260423/94‑1 (MQ=60)
                    GTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGG                                                                          <  SRR4302540.1926799/94‑1 (MQ=60)
                     gtgTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGG                                                                         <  SRR4302540.1662126/91‑1 (MQ=60)
                     TTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGG                                                                         <  SRR4302540.1662127/94‑1 (MQ=60)
                       TTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGC                                                                       <  SRR4302540.8860487/94‑1 (MQ=60)
                       TTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGC                                                                       >  SRR4302540.4877735/1‑94 (MQ=60)
                       TTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGC                                                                       <  SRR4302540.9498560/94‑1 (MQ=60)
                        TCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCC                                                                      >  SRR4302540.6979365/1‑94 (MQ=60)
                        TCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCC                                                                      <  SRR4302540.5203740/94‑1 (MQ=60)
                        TCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGCGTACAAGGGGCC                                                                      <  SRR4302540.1922244/94‑1 (MQ=60)
                         CTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCT                                                                     >  SRR4302540.5868521/1‑94 (MQ=60)
                         CTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCT                                                                     >  SRR4302540.7566076/1‑94 (MQ=60)
                           GGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGA                                                                   >  SRR4302540.2022504/1‑94 (MQ=60)
                            GCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGAT                                                                  <  SRR4302540.1230621/94‑1 (MQ=60)
                            GCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGAT                                                                  <  SRR4302540.5971074/94‑1 (MQ=60)
                            GCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAACCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGAT                                                                  >  SRR4302540.3712221/1‑94 (MQ=60)
                              CGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTT                                                                <  SRR4302540.9133251/94‑1 (MQ=60)
                               GCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTT                                                               >  SRR4302540.5110528/1‑94 (MQ=60)
                               GCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTT                                                               >  SRR4302540.8638310/1‑94 (MQ=60)
                               GCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTT                                                               >  SRR4302540.1609923/1‑94 (MQ=60)
                               GCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTT                                                               <  SRR4302540.8030645/94‑1 (MQ=60)
                                CGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTT                                                              <  SRR4302540.3986067/94‑1 (MQ=60)
                                CGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTT                                                              <  SRR4302540.1721208/94‑1 (MQ=60)
                                 GTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTA                                                             >  SRR4302540.3853680/1‑94 (MQ=60)
                                 GTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTA                                                             >  SRR4302540.4138158/1‑94 (MQ=60)
                                 GTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTA                                                             >  SRR4302540.1188050/1‑94 (MQ=60)
                                 GTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTA                                                             >  SRR4302540.1708945/1‑94 (MQ=60)
                                 GTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTA                                                             >  SRR4302540.6357068/1‑94 (MQ=60)
                                 GTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTA                                                             >  SRR4302540.4511967/1‑94 (MQ=60)
                                 GTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTA                                                             >  SRR4302540.6357066/1‑94 (MQ=60)
                                  TATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTAT                                                            >  SRR4302540.6752789/1‑94 (MQ=60)
                                  TATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTAT                                                            <  SRR4302540.7011437/94‑1 (MQ=60)
                                   ATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATG                                                           <  SRR4302540.8488193/94‑1 (MQ=60)
                                   ATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATG                                                           >  SRR4302540.1239779/1‑94 (MQ=60)
                                   ATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATG                                                           >  SRR4302540.6126118/1‑94 (MQ=60)
                                   ATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATG                                                           >  SRR4302540.7256415/1‑94 (MQ=60)
                                   ATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATG                                                           >  SRR4302540.468581/1‑94 (MQ=60)
                                   ATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATG                                                           >  SRR4302540.7256416/1‑94 (MQ=60)
                                    TTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGATACAGTTGTGTACAAGGGGCCTGATTTTTATGA                                                          >  SRR4302540.9794544/1‑94 (MQ=60)
                                     TTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGCCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGAC                                                         >  SRR4302540.3686643/1‑94 (MQ=60)
                                       CAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGG                                                       <  SRR4302540.2878347/94‑1 (MQ=60)
                                         GCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTTTGTACAAGGGGCCTGATTTTTATGACGGCG                                                     >  SRR4302540.4134308/1‑94 (MQ=60)
                                         GCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCG                                                     <  SRR4302540.1365597/94‑1 (MQ=60)
                                         CCCACAAATGGGATTACTAATGAACGGATATAATCCCGCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCG                                                     <  SRR4302540.1365534/94‑1 (MQ=60)
                                            ACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAA                                                  >  SRR4302540.8258172/1‑94 (MQ=60)
                                            ACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAA                                                  >  SRR4302540.1357526/1‑94 (MQ=60)
                                              AAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAA                                                >  SRR4302540.5640165/1‑94 (MQ=60)
                                              AAATGGGATGACTAATGAACGGAGATAATCCCTAACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAA                                                <  SRR4302540.1667260/94‑1 (MQ=60)
                                               AATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAA                                               >  SRR4302540.4418526/1‑94 (MQ=60)
                                               AATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAA                                               >  SRR4302540.247731/1‑94 (MQ=60)
                                                ATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAA                                              <  SRR4302540.5244529/94‑1 (MQ=60)
                                                 TGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAA                                             <  SRR4302540.927123/94‑1 (MQ=60)
                                                 TGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAA                                             >  SRR4302540.1710727/1‑94 (MQ=60)
                                                 TGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAA                                             >  SRR4302540.8010112/1‑94 (MQ=60)
                                                  GGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAAC                                            >  SRR4302540.3754805/1‑94 (MQ=60)
                                                  GGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAAC                                            <  SRR4302540.4565056/94‑1 (MQ=60)
                                                   GGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACC                                           >  SRR4302540.3843667/1‑94 (MQ=60)
                                                   GGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACC                                           <  SRR4302540.5444746/94‑1 (MQ=60)
                                                   GGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACC                                           <  SRR4302540.5444744/94‑1 (MQ=60)
                                                   GGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACC                                           <  SRR4302540.5444742/94‑1 (MQ=60)
                                                     ATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGC                                         >  SRR4302540.8576715/1‑94 (MQ=60)
                                                     ATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGC                                         <  SRR4302540.7374975/94‑1 (MQ=60)
                                                      TGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCC                                        <  SRR4302540.3060172/94‑1 (MQ=60)
                                                        ACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAG                                      <  SRR4302540.5918385/94‑1 (MQ=60)
                                                        ACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAG                                      <  SRR4302540.5918386/94‑1 (MQ=60)
                                                         CTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGT                                     >  SRR4302540.3847599/1‑94 (MQ=60)
                                                         CTAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGT                                     >  SRR4302540.3402677/1‑94 (MQ=60)
                                                         ATAATGAACGGAGATAATCCCTCACCTACCCGGCCCTTGTTACAGTTGTGTACAGGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGT                                     <  SRR4302540.5521248/94‑1 (MQ=60)
                                                          TAATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTA                                    >  SRR4302540.6463176/1‑94 (MQ=60)
                                                           AATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAA                                   >  SRR4302540.349635/1‑94 (MQ=60)
                                                           AATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAA                                   <  SRR4302540.7412712/94‑1 (MQ=60)
                                                           AATGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAA                                   >  SRR4302540.6847691/1‑94 (MQ=60)
                                                           AATGAACGGAGATAATCCCTCACCTAACCGGCCATTGTTACAGTTGTGTACAAGGGCCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAA                                   <  SRR4302540.9807449/94‑1 (MQ=60)
                                                             TGAACGGAGATAATCCCTCACCTAACCGGCCC‑‑TGTTTACAGTTGTGTACAAGTGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAAC                                 <  SRR4302540.9830396/94‑1 (MQ=60)
                                                             TGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAAC                                 <  SRR4302540.9911493/94‑1 (MQ=60)
                                                             TGAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACAGCGAAAAAAAACCGCCAGTAAAC                                 >  SRR4302540.8855005/1‑94 (MQ=60)
                                                             AGAACGGAGATAATCCCCCCCCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAAC                                 <  SRR4302540.3418351/94‑1 (MQ=60)
                                                              GAACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACC                                <  SRR4302540.6609348/94‑1 (MQ=60)
                                                               AACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCG                               <  SRR4302540.204091/94‑1 (MQ=60)
                                                               AACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCG                               >  SRR4302540.3262258/1‑94 (MQ=60)
                                                               AACGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCG                               >  SRR4302540.5080407/1‑94 (MQ=60)
                                                                 CGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGC                             <  SRR4302540.9554206/94‑1 (MQ=60)
                                                                 CGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGC                             <  SRR4302540.4228675/94‑1 (MQ=60)
                                                                 CGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGC                             <  SRR4302540.1663089/94‑1 (MQ=60)
                                                                 CGGAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGC                             <  SRR4302540.6581474/94‑1 (MQ=60)
                                                                 AGGAGATAATCCCTCCCCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCAAAAAAAAACCGCCAGTAAACCGGC                             <  SRR4302540.7315532/94‑1 (MQ=60)
                                                                   GAGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGG                           >  SRR4302540.6936224/1‑94 (MQ=60)
                                                                    AGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGT                          >  SRR4302540.4685190/1‑94 (MQ=60)
                                                                    AGATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATCACGGCGACAAAAAACCGCCAGTAACCCGGCGGG                          >  SRR4302540.2522514/1‑94 (MQ=60)
                                                                     GATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAACAAAAACCGCCAGTAAACCGGCGGTG                         >  SRR4302540.3263130/1‑94 (MQ=60)
                                                                     GATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAACCCGCCAGTAAACCGCCGGGG                         >  SRR4302540.3263135/1‑94 (MQ=60)
                                                                     GATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTG                         >  SRR4302540.3263137/1‑94 (MQ=60)
                                                                     GATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGAACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTG                         <  SRR4302540.4266126/94‑1 (MQ=60)
                                                                      ATAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGA                        >  SRR4302540.60873/1‑94 (MQ=60)
                                                                       TAATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAA                       <  SRR4302540.727511/94‑1 (MQ=60)
                                                                        AATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAAT                      <  SRR4302540.9876905/94‑1 (MQ=60)
                                                                        AATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAAT                      <  SRR4302540.6022421/94‑1 (MQ=60)
                                                                        AATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAAT                      <  SRR4302540.2703832/94‑1 (MQ=60)
                                                                        AATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAAT                      <  SRR4302540.2774160/94‑1 (MQ=60)
                                                                         accctTCACCTAACCGGCCCTTGTTACAGTTGTGTAAAAGGGGCCTGATTTTTATGACGGAGAAAAAAAACCGCCAGTAAACCGGCGGTGAATG                     <  SRR4302540.7537745/89‑1 (MQ=60)
                                                                         ATCCCTCCCCTACCCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATG                     <  SRR4302540.7336039/94‑1 (MQ=60)
                                                                         ATCCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATG                     >  SRR4302540.1871283/1‑94 (MQ=60)
                                                                          TCCCTCCCCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCTTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGC                    <  SRR4302540.3059250/94‑1 (MQ=60)
                                                                           CCCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCT                   >  SRR4302540.1740845/1‑94 (MQ=60)
                                                                            CCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTT                  >  SRR4302540.2870803/1‑94 (MQ=60)
                                                                            CCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTT                  <  SRR4302540.8910096/94‑1 (MQ=60)
                                                                            CCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTT                  >  SRR4302540.9000697/1‑94 (MQ=60)
                                                                            CCTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGCCCTGATTTTTATGACGGCAAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTT                  <  SRR4302540.124104/94‑1 (MQ=60)
                                                                             CTCCCCTAACCGGCCCTTGTTACAGTTGTGTAAAAGGGGCCTGCTTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTG                 <  SRR4302540.2515413/94‑1 (MQ=60)
                                                                             CTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTG                 <  SRR4302540.3897393/94‑1 (MQ=60)
                                                                             CTCACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTG                 >  SRR4302540.6169427/1‑94 (MQ=60)
                                                                               ccccctacccggcaCTTGTTACAGTTGTGCACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAGCCGGCGGTGAATGCTTGC                <  SRR4302540.8219950/80‑1 (MQ=60)
                                                                                ACCTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCAT              <  SRR4302540.6486196/94‑1 (MQ=60)
                                                                                 CCTACCCGGCCCTTTTTACAGTTGTTCACAGGGGGCCTGATTTTTATGGCGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATG             <  SRR4302540.1883366/94‑1 (MQ=60)
                                                                                  CTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGG            >  SRR4302540.8024421/1‑94 (MQ=60)
                                                                                  CTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGG            >  SRR4302540.4433775/1‑94 (MQ=60)
                                                                                  CTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGG            <  SRR4302540.2511846/94‑1 (MQ=60)
                                                                                  CTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGG            >  SRR4302540.6588513/1‑94 (MQ=60)
                                                                                  CTAACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGG            >  SRR4302540.6801247/1‑94 (MQ=60)
                                                                                    AACCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGAT          <  SRR4302540.7994400/94‑1 (MQ=60)
                                                                                      CCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAG        <  SRR4302540.8857549/94‑1 (MQ=60)
                                                                                      CCGGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAG        <  SRR4302540.1982554/94‑1 (MQ=60)
                                                                                      CCGGCCCTTGTTACAGGTGTGTACAAGGGGCCTGGTTTTTATGACGGCGAAAAAAAACCGCCAGTCAACCGGCGGTGAATGCTTGCATGGCTAG        >  SRR4302540.6711290/1‑94 (MQ=60)
                                                                                         GGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAGAT      >  SRR4302540.8459869/1‑94 (MQ=60)
                                                                                         GGCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAGAT      >  SRR4302540.7857400/1‑94 (MQ=60)
                                                                                           CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAGATTT    >  SRR4302540.1041696/1‑94 (MQ=60)
                                                                                           CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAGATTT    <  SRR4302540.4387830/94‑1 (MQ=60)
                                                                                            CCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAGATTTG   <  SRR4302540.3310792/94‑1 (MQ=60)
                                                                                            CCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAGATTTG   <  SRR4302540.36015/94‑1 (MQ=60)
                                                                                            CCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAGATTTG   >  SRR4302540.3823340/1‑94 (MQ=60)
                                                                                            CCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAGATTTG   <  SRR4302540.4408333/94‑1 (MQ=60)
                                                                                             CTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGGGAATGCTTGCATGGATAGATTTGG  >  SRR4302540.8137749/1‑94 (MQ=60)
                                                                                             |                                                                                              
GGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAGATTTGT  >  NC_000913/1620705‑1620891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: