Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,621,746 T→C I43M (ATA→ATG)  ydeH ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,621,7460TC98.4% 1005.2 / 0.4 316I43M (ATA→ATG) ydeHhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (1/4);  new base C (174/137);  total (175/141)
Fisher's exact test for biased strand distribution p-value = 1.76e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 325 total aligned reads displayed.

CCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATT  >  NC_000913/1621656‑1621835
                                                                                          |                                                                                         
  gaccGTAAGGTAATTCATCGTTATCGAGTGCCCCCAGATGATCAACCCCCCGACCAAACTGGCACAGTCCATAAGAATGTTTATCCGTCAttt                                                                                       <  2:5878798/90‑1 (MQ=255)
   gaCGTAAGGCAATTGATCGTTGTCGAGTGGCCCCAGATCATCAATCCACCGACCAAACGGGCACAGTCCATAAGAATGGTTATCCGTTATTTc                                                                                      <  1:9615463/92‑1 (MQ=255)
   aaCGTAAGGTAATTCATCGATATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGGTATCCGTCATTTc                                                                                      >  2:3651132/1‑93 (MQ=255)
    aCGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCt                                                                                     >  1:9212392/1‑93 (MQ=255)
      gTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTgg                                                                                   >  2:2662303/1‑93 (MQ=255)
      gTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTgg                                                                                   <  1:1824643/93‑1 (MQ=255)
       tAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGc                                                                                  <  2:565201/93‑1 (MQ=255)
         aGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCtt                                                                                >  2:3023939/1‑93 (MQ=255)
         aGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCtt                                                                                <  2:2270892/93‑1 (MQ=255)
         aGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCtt                                                                                >  1:3809464/1‑93 (MQ=255)
          ggTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTa                                                                               <  1:7486343/93‑1 (MQ=255)
          ggTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTa                                                                               <  1:596650/93‑1 (MQ=255)
            tAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACt                                                                             <  2:2592130/93‑1 (MQ=255)
              aTTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTgg                                                                           <  1:6307672/93‑1 (MQ=255)
               ttCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGc                                                                          <  2:1981270/93‑1 (MQ=255)
                tCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATTCGTCATTTCTGGCTTACTGGCa                                                                         >  1:1051930/1‑93 (MQ=255)
                 taTCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAt                                                                        <  1:7197976/92‑1 (MQ=255)
                 cATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAt                                                                        >  2:2935236/1‑93 (MQ=255)
                   tCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtct                                                                      >  1:3128891/1‑93 (MQ=255)
                   tCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtct                                                                      <  1:8696009/93‑1 (MQ=255)
                    cGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtctc                                                                     <  2:3194275/93‑1 (MQ=255)
                     gTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtctct                                                                    <  1:8387605/93‑1 (MQ=255)
                      ttATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtctctc                                                                   >  1:9370254/1‑93 (MQ=255)
                      ttATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtctctc                                                                   <  2:1507807/93‑1 (MQ=255)
                      ttATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtctctc                                                                   <  1:2687400/93‑1 (MQ=255)
                      ttATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtctctc                                                                   >  1:6074496/1‑93 (MQ=255)
                       tATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTcg                                                                  <  1:5140147/93‑1 (MQ=255)
                       tATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTcg                                                                  <  2:7081321/93‑1 (MQ=255)
                         tCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTcgcg                                                                >  2:9469429/1‑93 (MQ=255)
                         tCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTcgcg                                                                <  1:5615489/93‑1 (MQ=255)
                           gAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGAc                                                              >  1:8851869/1‑93 (MQ=255)
                            aGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGAcc                                                             >  2:6491990/1‑93 (MQ=255)
                            aGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGAcc                                                             <  1:1163062/93‑1 (MQ=255)
                                gCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGc                                                         <  1:1682040/93‑1 (MQ=255)
                                  cccAGATGATCAATCCACCGACCCAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtg                                                       <  2:5496239/93‑1 (MQ=255)
                                   ccAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtgt                                                      >  1:5785942/1‑93 (MQ=255)
                                   ccAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtgt                                                      >  1:9439319/1‑93 (MQ=255)
                                   ccAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtgt                                                      >  2:3750788/1‑93 (MQ=255)
                                    cAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtgtg                                                     >  1:5080494/1‑93 (MQ=255)
                                         gatCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACa                                                >  1:7829651/1‑93 (MQ=255)
                                         gatCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGAATCTCTCGCGACCACGCTGTGAAACa                                                >  1:2633134/1‑93 (MQ=255)
                                           tCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATa                                              <  1:811588/93‑1 (MQ=255)
                                           tCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATa                                              >  1:8224066/1‑93 (MQ=255)
                                           tCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATa                                              >  1:2900990/1‑93 (MQ=255)
                                            cAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATAc                                             <  1:3452981/93‑1 (MQ=255)
                                            cAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATAc                                             <  1:3263809/93‑1 (MQ=255)
                                             aaTCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACt                                            >  1:6934821/1‑93 (MQ=255)
                                             aaTCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACt                                            >  2:1428825/1‑93 (MQ=255)
                                             aaTCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACt                                            >  1:8342301/1‑93 (MQ=255)
                                             aaTCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACt                                            >  2:4633563/1‑93 (MQ=255)
                                              aTCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTc                                           <  2:7846042/93‑1 (MQ=255)
                                               tCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCa                                          >  1:6513230/1‑93 (MQ=255)
                                               tCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCa                                          >  1:4498978/1‑93 (MQ=255)
                                                ccACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCAc                                         <  1:5040924/93‑1 (MQ=255)
                                                 cACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCAcc                                        <  1:6742482/93‑1 (MQ=255)
                                                   ccGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAg                                      >  2:4176846/1‑93 (MQ=255)
                                                    cGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGc                                     >  1:104781/1‑93 (MQ=255)
                                                      aCCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCa                                   >  2:10018147/1‑93 (MQ=255)
                                                      aCCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCa                                   <  1:112387/93‑1 (MQ=255)
                                                       ccAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCAc                                  <  2:110546/93‑1 (MQ=255)
                                                       ccAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCAc                                  >  1:2040960/1‑93 (MQ=255)
                                                        cAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACt                                 >  2:2219693/1‑93 (MQ=255)
                                                         aaaCTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTg                                <  1:9860996/93‑1 (MQ=255)
                                                          aaCTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTgg                               >  2:3547992/1‑93 (MQ=255)
                                                            cTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTa                             >  1:9032202/1‑93 (MQ=255)
                                                            cTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTa                             <  2:4732027/93‑1 (MQ=255)
                                                            cTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTa                             <  2:7519269/93‑1 (MQ=255)
                                                            cTGGCACAGTCCATAAGAATGGTTATCCGGCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTa                             <  1:2261462/93‑1 (MQ=255)
                                                             tGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAg                            <  1:465361/93‑1 (MQ=255)
                                                             tGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAg                            <  2:4908642/93‑1 (MQ=255)
                                                              ggCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGt                           >  1:6258010/1‑93 (MQ=255)
                                                                  caGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGc                       >  1:8261672/1‑93 (MQ=255)
                                                                   aGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCa                      >  1:7793487/1‑93 (MQ=255)
                                                                   aGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCa                      <  1:4036264/93‑1 (MQ=255)
                                                                    gTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCAt                     >  2:5962556/1‑93 (MQ=255)
                                                                     tCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATc                    >  2:2381757/1‑93 (MQ=255)
                                                                     tCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATc                    <  1:1722759/93‑1 (MQ=255)
                                                                       cATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGa                  <  2:4138244/93‑1 (MQ=255)
                                                                       cATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGa                  <  1:1359759/93‑1 (MQ=255)
                                                                       cATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGa                  <  1:3862495/93‑1 (MQ=255)
                                                                       cATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGa                  >  2:1305259/1‑93 (MQ=255)
                                                                       cATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGa                  <  1:3576629/93‑1 (MQ=255)
                                                                        aTAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGAt                 <  1:9947175/93‑1 (MQ=255)
                                                                         tAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATa                >  2:9297762/1‑93 (MQ=255)
                                                                         tAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATa                >  1:3526706/1‑93 (MQ=255)
                                                                         tAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATa                >  2:1636167/1‑93 (MQ=255)
                                                                           aGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGc              <  2:5141834/93‑1 (MQ=255)
                                                                             aaTGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCt            <  2:6302760/93‑1 (MQ=255)
                                                                             aaTGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCt            >  1:3062741/1‑93 (MQ=255)
                                                                             aaTGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCt            >  2:337806/1‑93 (MQ=255)
                                                                               tGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTa          >  1:4785084/1‑93 (MQ=255)
                                                                                ggTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTAt         <  2:6691986/93‑1 (MQ=255)
                                                                                   tATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTga      <  1:242040/93‑1 (MQ=255)
                                                                                   tATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTga      <  1:4214766/93‑1 (MQ=255)
                                                                                    aTCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTgag     >  2:3256149/1‑93 (MQ=255)
                                                                                    aTCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTgag     >  2:8200193/1‑93 (MQ=255)
                                                                                     tCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTgaga    >  2:6155414/1‑93 (MQ=255)
                                                                                      ccGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAt   >  2:804450/1‑93 (MQ=255)
                                                                                      ccGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAt   >  1:5343198/1‑93 (MQ=255)
                                                                                       cGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAtt  >  2:8577848/1‑93 (MQ=255)
                                                                                          |                                                                                         
CCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATT  >  NC_000913/1621656‑1621835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 201 total aligned reads displayed.
TAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAAC  >  NC_000913/1621653‑1621839
                                                                                             |                                                                                             
TAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTC                                                                                               <  SRR4302540.10048267/94‑1 (MQ=60)
TAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTC                                                                                               <  SRR4302540.2955131/94‑1 (MQ=60)
   CCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATT                                                                                            >  SRR4302540.1090018/1‑94 (MQ=60)
     GAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTC                                                                                          >  SRR4302540.8509688/1‑94 (MQ=60)
     GAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTC                                                                                          <  SRR4302540.5681137/94‑1 (MQ=60)
      GACGTAAGGCAATTGATCGTTGTCGAGTGGCCCCAGATCATCAATCCACCGACCAAACGGGCACAGTCCATAAGAATGGTTATCCGTTATTTCT                                                                                         <  SRR4302540.9728825/94‑1 (MQ=60)
      AACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCT                                                                                         >  SRR4302540.3861981/1‑94 (MQ=60)
      AACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCT                                                                                         >  SRR4302540.3861980/1‑94 (MQ=60)
      AACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCT                                                                                         >  SRR4302540.9322926/1‑94 (MQ=60)
      AACGTAAGGTAATTCATCGTTATCGACTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCT                                                                                         <  SRR4302540.3590692/94‑1 (MQ=60)
      AACGTAAGGTAATGCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCT                                                                                         <  SRR4302540.3590691/94‑1 (MQ=60)
       ACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTG                                                                                        <  SRR4302540.4203752/94‑1 (MQ=60)
        CGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGG                                                                                       <  SRR4302540.3022504/94‑1 (MQ=60)
         GTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGC                                                                                      <  SRR4302540.1844590/94‑1 (MQ=60)
         GTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGC                                                                                      >  SRR4302540.1945499/1‑94 (MQ=60)
         GTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGC                                                                                      <  SRR4302540.5884498/94‑1 (MQ=60)
         GTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGC                                                                                      >  SRR4302540.344002/1‑94 (MQ=60)
           AAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTT                                                                                    <  SRR4302540.9107759/94‑1 (MQ=60)
           AAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTT                                                                                    >  SRR4302540.3850953/1‑94 (MQ=60)
            AGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTA                                                                                   <  SRR4302540.4508744/94‑1 (MQ=60)
             GGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTAC                                                                                  <  SRR4302540.603057/94‑1 (MQ=60)
             GGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTAC                                                                                  <  SRR4302540.7569911/94‑1 (MQ=60)
             GGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTAC                                                                                  >  SRR4302540.8466288/1‑94 (MQ=60)
             AGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGTCTTAC                                                                                  <  SRR4302540.7569913/94‑1 (MQ=60)
              GTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACT                                                                                 >  SRR4302540.2931301/1‑94 (MQ=60)
              GTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACT                                                                                 <  SRR4302540.821309/94‑1 (MQ=60)
               TAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTG                                                                                <  SRR4302540.2364129/94‑1 (MQ=60)
               TAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTG                                                                                <  SRR4302540.9979002/94‑1 (MQ=60)
                AATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGG                                                                               >  SRR4302540.219040/1‑94 (MQ=60)
                 ATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGC                                                                              >  SRR4302540.3227393/1‑94 (MQ=60)
                 ATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGC                                                                              >  SRR4302540.2673702/1‑94 (MQ=60)
                 ATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGC                                                                              >  SRR4302540.2673701/1‑94 (MQ=60)
                 ATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGC                                                                              <  SRR4302540.6377633/94‑1 (MQ=60)
                 ATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGC                                                                              <  SRR4302540.6377912/94‑1 (MQ=60)
                  TTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATTCGTCATTTCTGGCTTACTGGCA                                                                             >  SRR4302540.1062637/1‑94 (MQ=60)
                  TTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCT                                                                             >  SRR4302540.1552406/1‑94 (MQ=60)
                   TCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCAT                                                                            >  SRR4302540.6929605/1‑94 (MQ=60)
                   TCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAT                                                                            <  SRR4302540.7100031/94‑1 (MQ=60)
                   TCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAT                                                                            <  SRR4302540.5163022/94‑1 (MQ=60)
                    TATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATC                                                                           <  SRR4302540.7278215/94‑1 (MQ=60)
                    CATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATC                                                                           >  SRR4302540.1062412/1‑94 (MQ=60)
                    CATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATC                                                                           >  SRR4302540.8784530/1‑94 (MQ=60)
                    CATCGTTATCGAGTGGCCCCAGATGATCAACCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATC                                                                           >  SRR4302540.1062411/1‑94 (MQ=60)
                     ATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCT                                                                          >  SRR4302540.3163046/1‑94 (MQ=60)
                      TCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTC                                                                         <  SRR4302540.8796960/94‑1 (MQ=60)
                      TCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTC                                                                         <  SRR4302540.779543/94‑1 (MQ=60)
                       CGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCT                                                                        >  SRR4302540.519281/1‑94 (MQ=60)
                       CGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCT                                                                        >  SRR4302540.789971/1‑94 (MQ=60)
                       CGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCT                                                                        <  SRR4302540.4644275/94‑1 (MQ=60)
                       CGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCT                                                                        >  SRR4302540.789970/1‑94 (MQ=60)
                        GTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTC                                                                       >  SRR4302540.9481818/1‑94 (MQ=60)
                        GTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTC                                                                       >  SRR4302540.4922428/1‑94 (MQ=60)
                        GTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTC                                                                       >  SRR4302540.6142044/1‑94 (MQ=60)
                        GTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTC                                                                       >  SRR4302540.7331557/1‑94 (MQ=60)
                        GTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTC                                                                       <  SRR4302540.8484924/94‑1 (MQ=60)
                        GTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTC                                                                       >  SRR4302540.9429011/1‑94 (MQ=60)
                         TTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCG                                                                      <  SRR4302540.2716446/94‑1 (MQ=60)
                         TTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCG                                                                      <  SRR4302540.9189916/94‑1 (MQ=60)
                          TATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGC                                                                     <  SRR4302540.5195826/94‑1 (MQ=60)
                          TATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGC                                                                     <  SRR4302540.569461/94‑1 (MQ=60)
                           ATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCG                                                                    <  SRR4302540.43817/94‑1 (MQ=60)
                           ATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCG                                                                    <  SRR4302540.3734539/94‑1 (MQ=60)
                            TCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGA                                                                   <  SRR4302540.5677270/94‑1 (MQ=60)
                             CGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGAC                                                                  >  SRR4302540.1194270/1‑94 (MQ=60)
                             CGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGAC                                                                  >  SRR4302540.8954273/1‑94 (MQ=60)
                              GAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACC                                                                 >  SRR4302540.9292560/1‑94 (MQ=60)
                               AGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCA                                                                <  SRR4302540.1175137/94‑1 (MQ=60)
                               AGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCA                                                                <  SRR4302540.5132168/94‑1 (MQ=60)
                                GTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCAC                                                               <  SRR4302540.255251/94‑1 (MQ=60)
                                GTGGCCCCAGAAGAACAAACCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCAC                                                               <  SRR4302540.70556/94‑1 (MQ=60)
                                GTAGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCAC                                                               <  SRR4302540.1228830/94‑1 (MQ=60)
                                 TGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACG                                                              >  SRR4302540.8881215/1‑94 (MQ=60)
                                 TGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACG                                                              >  SRR4302540.689617/1‑94 (MQ=60)
                                   GCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCT                                                            >  SRR4302540.5458024/1‑94 (MQ=60)
                                   GCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCT                                                            <  SRR4302540.3383727/94‑1 (MQ=60)
                                   GCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCT                                                            <  SRR4302540.1700300/94‑1 (MQ=60)
                                    CCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTG                                                           >  SRR4302540.3648628/1‑94 (MQ=60)
                                     CCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGT                                                          <  SRR4302540.115221/94‑1 (MQ=60)
                                     CCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGT                                                          >  SRR4302540.9551414/1‑94 (MQ=60)
                                     CCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGT                                                          >  SRR4302540.2568537/1‑94 (MQ=60)
                                     CCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGT                                                          >  SRR4302540.5849858/1‑94 (MQ=60)
                                      CCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTG                                                         >  SRR4302540.5135422/1‑94 (MQ=60)
                                      CCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTG                                                         >  SRR4302540.1727746/1‑94 (MQ=60)
                                       CAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGA                                                        <  SRR4302540.7153169/94‑1 (MQ=60)
                                        AGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAA                                                       >  SRR4302540.6183012/1‑94 (MQ=60)
                                        AGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAA                                                       >  SRR4302540.8471300/1‑94 (MQ=60)
                                        AGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAA                                                       >  SRR4302540.6183013/1‑94 (MQ=60)
                                         GATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAA                                                      >  SRR4302540.1263336/1‑94 (MQ=60)
                                           TGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACA                                                    >  SRR4302540.7921138/1‑94 (MQ=60)
                                           TGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACA                                                    >  SRR4302540.6726604/1‑94 (MQ=60)
                                           TGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACA                                                    >  SRR4302540.4805751/1‑94 (MQ=60)
                                           TGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACA                                                    >  SRR4302540.7921139/1‑94 (MQ=60)
                                           TGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGAATCTCTCGCGACCACGCTGTGAAACA                                                    >  SRR4302540.2661647/1‑94 (MQ=60)
                                            GATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACAT                                                   <  SRR4302540.8076448/94‑1 (MQ=60)
                                            GATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACAT                                                   <  SRR4302540.6431704/94‑1 (MQ=60)
                                             ATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATA                                                  >  SRR4302540.8319672/1‑94 (MQ=60)
                                             ATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATA                                                  >  SRR4302540.2932650/1‑94 (MQ=60)
                                             ATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATA                                                  >  SRR4302540.1432801/1‑94 (MQ=60)
                                              TCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATAC                                                 <  SRR4302540.820206/94‑1 (MQ=60)
                                               CAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCCTCTCTCGCGCCCCCGCTGTGAAACATACC                                                >  SRR4302540.8439128/1‑94 (MQ=60)
                                               CAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACT                                                >  SRR4302540.8439127/1‑94 (MQ=60)
                                               CAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACT                                                <  SRR4302540.3299424/94‑1 (MQ=60)
                                               CAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACT                                                >  SRR4302540.7012003/1‑94 (MQ=60)
                                               CAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACT                                                <  SRR4302540.3490550/94‑1 (MQ=60)
                                                AATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTC                                               <  SRR4302540.6347506/94‑1 (MQ=60)
                                                AATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTC                                               <  SRR4302540.7201223/94‑1 (MQ=60)
                                                AATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTC                                               <  SRR4302540.6347507/94‑1 (MQ=60)
                                                 ATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGACACATACTCC                                              >  SRR4302540.4547752/1‑94 (MQ=60)
                                                 ATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCA                                              >  SRR4302540.6585584/1‑94 (MQ=60)
                                                 ATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCA                                              >  SRR4302540.6137642/1‑94 (MQ=60)
                                                 ATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCA                                              >  SRR4302540.4547751/1‑94 (MQ=60)
                                                   CCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACC                                            <  SRR4302540.5095451/94‑1 (MQ=60)
                                                   CCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACC                                            <  SRR4302540.6421695/94‑1 (MQ=60)
                                                    CACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCA                                           >  SRR4302540.1940528/1‑94 (MQ=60)
                                                    CACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCA                                           <  SRR4302540.1142719/94‑1 (MQ=60)
                                                    CACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCA                                           <  SRR4302540.6816975/94‑1 (MQ=60)
                                                     ACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATTTCTCGCGACCACGCTGTGCAACATACTCACCAC                                          >  SRR4302540.5111348/1‑94 (MQ=60)
                                                     ACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAG                                          >  SRR4302540.3109489/1‑94 (MQ=60)
                                                      CCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGC                                         >  SRR4302540.105900/1‑94 (MQ=60)
                                                       CGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCC                                        >  SRR4302540.32169/1‑94 (MQ=60)
                                                        GACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCA                                       >  SRR4302540.8049600/1‑94 (MQ=60)
                                                        GACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCA                                       >  SRR4302540.351392/1‑94 (MQ=60)
                                                         ACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCAC                                      >  SRR4302540.2062952/1‑94 (MQ=60)
                                                         ACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCAC                                      <  SRR4302540.113587/94‑1 (MQ=60)
                                                          CCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACT                                     <  SRR4302540.540975/94‑1 (MQ=60)
                                                           CAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTG                                    <  SRR4302540.6100235/94‑1 (MQ=60)
                                                           CAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTG                                    >  SRR4302540.5201743/1‑94 (MQ=60)
                                                            AAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGG                                   <  SRR4302540.3757435/94‑1 (MQ=60)
                                                            AAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGG                                   <  SRR4302540.9976208/94‑1 (MQ=60)
                                                             AACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGT                                  <  SRR4302540.1827710/94‑1 (MQ=60)
                                                             AACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGT                                  >  SRR4302540.4081341/1‑94 (MQ=60)
                                                              ACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTA                                 >  SRR4302540.9140594/1‑94 (MQ=60)
                                                               CTGGCACAGTCCATAAGAATGGTTATCCGGCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAG                                <  SRR4302540.2285724/94‑1 (MQ=60)
                                                                TGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGT                               >  SRR4302540.1071983/1‑94 (MQ=60)
                                                                TGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGT                               >  SRR4302540.6327640/1‑94 (MQ=60)
                                                                TGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGT                               <  SRR4302540.470329/94‑1 (MQ=60)
                                                                 GGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACAAACTCACCAGCCACTGGTAGTG                              <  SRR4302540.5033299/94‑1 (MQ=60)
                                                                   CACAGTCCATAAGAATGGTTATCCGTTATTTCTGGGTTACTGGCATCTCTCGCGACCACGCTGTGAAAAATACTCACCAGCCACTGGTAGTGGG                            >  SRR4302540.10103605/1‑94 (MQ=60)
                                                                   CACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGG                            >  SRR4302540.4722619/1‑94 (MQ=60)
                                                                    ACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGC                           >  SRR4302540.8357676/1‑94 (MQ=60)
                                                                     CAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCA                          >  SRR4302540.7884585/1‑94 (MQ=60)
                                                                      AGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCAT                         <  SRR4302540.4079784/94‑1 (MQ=60)
                                                                       GTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATC                        <  SRR4302540.9530800/94‑1 (MQ=60)
                                                                        TCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCG                       <  SRR4302540.8320438/94‑1 (MQ=60)
                                                                        TCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCG                       <  SRR4302540.1741352/94‑1 (MQ=60)
                                                                          CATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCCCTGGTAGTGGGCATCGAT                     >  SRR4302540.8339254/1‑94 (MQ=60)
                                                                          CATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGAT                     <  SRR4302540.1374103/94‑1 (MQ=60)
                                                                          CATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGAT                     <  SRR4302540.2799986/94‑1 (MQ=60)
                                                                          CATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGAT                     <  SRR4302540.3904477/94‑1 (MQ=60)
                                                                          CATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGAT                     >  SRR4302540.10069075/1‑94 (MQ=60)
                                                                          CATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGAT                     <  SRR4302540.3615694/94‑1 (MQ=60)
                                                                           ATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATA                    <  SRR4302540.10063321/94‑1 (MQ=60)
                                                                           ATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATA                    >  SRR4302540.3565170/1‑94 (MQ=60)
                                                                           ATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATA                    >  SRR4302540.9792975/1‑94 (MQ=60)
                                                                            TAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAG                   <  SRR4302540.5913955/94‑1 (MQ=60)
                                                                             AAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGC                  >  SRR4302540.4509669/1‑94 (MQ=60)
                                                                             AAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGC                  <  SRR4302540.1876865/94‑1 (MQ=60)
                                                                              AGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCC                 >  SRR4302540.3950358/1‑94 (MQ=60)
                                                                              AGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCC                 >  SRR4302540.8847073/1‑94 (MQ=60)
                                                                              AGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCC                 <  SRR4302540.1713638/94‑1 (MQ=60)
                                                                               GAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCT                >  SRR4302540.3096342/1‑94 (MQ=60)
                                                                                AATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTT               >  SRR4302540.8389245/1‑94 (MQ=60)
                                                                                AATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTT               <  SRR4302540.9789244/94‑1 (MQ=60)
                                                                                AATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTT               <  SRR4302540.2076030/94‑1 (MQ=60)
                                                                                 ATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTA              >  SRR4302540.5099821/1‑94 (MQ=60)
                                                                                 ATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTA              >  SRR4302540.2667546/1‑94 (MQ=60)
                                                                                 ATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTA              <  SRR4302540.9119534/94‑1 (MQ=60)
                                                                                 ATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTA              >  SRR4302540.4836241/1‑94 (MQ=60)
                                                                                 ATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTA              >  SRR4302540.7520610/1‑94 (MQ=60)
                                                                                  TGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTAT             <  SRR4302540.3109041/94‑1 (MQ=60)
                                                                                  TGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTAT             <  SRR4302540.5843507/94‑1 (MQ=60)
                                                                                   GGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATT            >  SRR4302540.3513478/1‑94 (MQ=60)
                                                                                   GGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATT            >  SRR4302540.4017299/1‑94 (MQ=60)
                                                                                   GGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATT            <  SRR4302540.1763090/94‑1 (MQ=60)
                                                                                   GGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATT            <  SRR4302540.3087815/94‑1 (MQ=60)
                                                                                   GGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATT            <  SRR4302540.9711437/94‑1 (MQ=60)
                                                                                    GTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTG           <  SRR4302540.9315265/94‑1 (MQ=60)
                                                                                    GTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTG           <  SRR4302540.8248725/94‑1 (MQ=60)
                                                                                     TTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGA          <  SRR4302540.9796154/94‑1 (MQ=60)
                                                                                     TTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGA          >  SRR4302540.234464/1‑94 (MQ=60)
                                                                                      TATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAG         <  SRR4302540.9466762/94‑1 (MQ=60)
                                                                                      TATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAG         <  SRR4302540.9557737/94‑1 (MQ=60)
                                                                                      TATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAG         <  SRR4302540.9483744/94‑1 (MQ=60)
                                                                                      TATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAG         <  SRR4302540.244379/94‑1 (MQ=60)
                                                                                      TATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAG         <  SRR4302540.4260660/94‑1 (MQ=60)
                                                                                      TATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAG         >  SRR4302540.5343025/1‑94 (MQ=60)
                                                                                       ATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGCAGTGGGCATCGATAGCCTTATTGAGA        >  SRR4302540.8383227/1‑94 (MQ=60)
                                                                                        TCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAT       >  SRR4302540.5401806/1‑94 (MQ=60)
                                                                                        TCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACAAGCCACTGGGAGGGGGCCTCGCGAGTCTTATTGAGAT       >  SRR4302540.6791557/1‑94 (MQ=60)
                                                                                          CGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTT     >  SRR4302540.2126067/1‑94 (MQ=60)
                                                                                          CGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTT     >  SRR4302540.741805/1‑94 (MQ=60)
                                                                                          CGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTT     >  SRR4302540.5913442/1‑94 (MQ=60)
                                                                                          CGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTT     >  SRR4302540.4515197/1‑94 (MQ=60)
                                                                                           GTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTTTTGAGATTTA    >  SRR4302540.4190163/1‑94 (MQ=60)
                                                                                           GTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTA    >  SRR4302540.1736324/1‑94 (MQ=60)
                                                                                           GTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTA    >  SRR4302540.8582842/1‑94 (MQ=60)
                                                                                           GTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTA    <  SRR4302540.8138010/94‑1 (MQ=60)
                                                                                           GTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTA    >  SRR4302540.9519729/1‑94 (MQ=60)
                                                                                           GTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTA    >  SRR4302540.2820835/1‑94 (MQ=60)
                                                                                             CATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAAC  >  SRR4302540.8692588/1‑94 (MQ=60)
                                                                                             |                                                                                             
TAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAAC  >  NC_000913/1621653‑1621839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑