Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,655,245	T→C	L91L (TTA→TTG)	ynfC ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,655,245	0	T	C	99.4%	1022.8 / ‑5.1	313	L91L (TTA→TTG)	ynfC	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (173/138); total (174/139)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.30e-01

Only 100 of 319 total aligned reads displayed.

TAAACGTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGTAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTGAGT  >  NC_000913/1655155‑1655334

 aaaCGTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAAt                                                                                        >  2:6242127/1‑93 (MQ=255)

   aCGTACTCTCTTCTCCAGCGTCTCGGCATCATGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTc                                                                                      <  2:8521743/93‑1 (MQ=255)

    cGTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCg                                                                                     <  1:6005333/93‑1 (MQ=255)

      tACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAg                                                                                   <  1:1079785/93‑1 (MQ=255)

       tctctctTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGt                                                                                  <  2:2457373/92‑1 (MQ=255)

       aCTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGt                                                                                  >  1:1169075/1‑93 (MQ=255)

        ctctctTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTg                                                                                 >  2:4712936/1‑93 (MQ=255)

        ctctctTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTACCAGATCCAGCAATTCGAGTg                                                                                 <  1:5909031/93‑1 (MQ=255)

         tctctTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGa                                                                                <  2:5526111/93‑1 (MQ=255)

         tctctTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGa                                                                                <  2:4294/93‑1 (MQ=255)

           tcttctCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAAt                                                                              <  2:1496964/93‑1 (MQ=255)

            ctgctcCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATc                                                                             <  2:2028332/90‑1 (MQ=255)

              tctcCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCaa                                                                           >  1:8304643/1‑93 (MQ=255)

              tctcCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCaa                                                                           >  1:2730086/1‑93 (MQ=255)

                tcCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCaaaa                                                                         <  1:6441996/93‑1 (MQ=255)

                tcCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCaaaa                                                                         >  2:3959342/1‑93 (MQ=255)

                tcCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCaaaa                                                                         >  1:7028128/1‑93 (MQ=255)

                 ccAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAAc                                                                        <  2:2296588/93‑1 (MQ=255)

                 ccAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAAc                                                                        <  1:2016653/93‑1 (MQ=255)

                 ccAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAAc                                                                        <  1:7807175/93‑1 (MQ=255)

                  cAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACa                                                                       <  1:5377723/93‑1 (MQ=255)

                  cAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACa                                                                       >  1:1312729/1‑93 (MQ=255)

                   aGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACac                                                                      >  1:5076323/1‑92 (MQ=255)

                     cGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGcc                                                                    <  2:5912149/93‑1 (MQ=255)

                      gTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCct                                                                   >  2:4098592/1‑93 (MQ=255)

                      gTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCct                                                                   >  1:4965343/1‑93 (MQ=255)

                      gTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCct                                                                   <  1:1483072/93‑1 (MQ=255)

                       tctcGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCctt                                                                  >  2:3535864/1‑93 (MQ=255)

                       tctcGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCctt                                                                  >  2:6984695/1‑93 (MQ=255)

                        ctcGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCcttc                                                                 <  2:6352108/93‑1 (MQ=255)

                           ggCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCttcttc                                                              <  1:6976053/93‑1 (MQ=255)

                           ggCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCttcttc                                                              <  1:7316595/93‑1 (MQ=255)

                           ggCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCttcttc                                                              <  1:586179/93‑1 (MQ=255)

                           ggCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCttcttc                                                              <  2:3235764/93‑1 (MQ=255)

                               tCACGTTAATAATTGGCGTCCAGTACCAGTGCGACCACGGTATTATTTTCCAGATCCAGTAATTCGAGTGAATCAAATCAGCCTTCTTCCGAc                                                          >  1:8957042/1‑93 (MQ=255)

                               tCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGAc                                                          <  2:9786198/93‑1 (MQ=255)

                               tCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGAc                                                          >  1:1334242/1‑93 (MQ=255)

                                  cGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACaaa                                                       <  1:6732490/93‑1 (MQ=255)

                                    gTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGt                                                     >  2:7858791/1‑93 (MQ=255)

                                     taataaTTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTc                                                    >  2:598985/1‑93 (MQ=255)

                                        taatTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCa                                                 >  2:9577255/1‑93 (MQ=255)

                                        taatTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCa                                                 >  2:7213545/1‑93 (MQ=255)

                                        taatTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCa                                                 >  1:802964/1‑93 (MQ=255)

                                        taatTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCa                                                 <  1:8415115/93‑1 (MQ=255)

                                           tttgCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGaa                                              <  1:1976192/90‑1 (MQ=255)

                                           ttGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGaa                                              <  1:5153062/93‑1 (MQ=255)

                                            tGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGaaa                                             <  1:4368721/93‑1 (MQ=255)

                                             ggCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAac                                            >  1:8749819/1‑93 (MQ=255)

                                                gTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGACACACg                                         >  1:3852881/1‑93 (MQ=255)

                                                gTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACg                                         >  2:375339/1‑93 (MQ=255)

                                                gTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACg                                         >  1:758063/1‑93 (MQ=255)

                                                 tCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGt                                        <  1:5702846/93‑1 (MQ=255)

                                                 tCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGt                                        <  1:8563355/93‑1 (MQ=255)

                                                  ccAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGtt                                       >  2:4909344/1‑93 (MQ=255)

                                                  ccAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGtt                                       <  1:1703764/93‑1 (MQ=255)

                                                    aGTACCCGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTc                                     <  1:7645069/93‑1 (MQ=255)

                                                     gTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGAGAATCACAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCg                                    >  2:5193989/1‑93 (MQ=255)

                                                        ccAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCa                                 <  1:6801578/93‑1 (MQ=255)

                                                        ccAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCa                                 <  1:9823576/93‑1 (MQ=255)

                                                             gCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCa                            <  2:7991204/93‑1 (MQ=255)

                                                               gACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCAcc                          >  2:7492723/1‑93 (MQ=255)

                                                               gACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCAcc                          <  2:7398103/93‑1 (MQ=255)

                                                               gACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTGCTCCCGACAAAGTCCCAGAAACCCGTTTCGTCACTTcccc                          <  2:496260/93‑1 (MQ=255)

                                                                aCCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCt                         >  2:5841672/1‑93 (MQ=255)

                                                                aCCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCt                         <  2:565855/93‑1 (MQ=255)

                                                                 ccACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCtt                        <  2:8927579/93‑1 (MQ=255)

                                                                  cACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTg                       >  1:4792037/1‑93 (MQ=255)

                                                                   aCGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGc                      >  1:6025487/1‑93 (MQ=255)

                                                                   aCGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGc                      >  2:2969856/1‑93 (MQ=255)

                                                                   aCGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGc                      >  2:173179/1‑93 (MQ=255)

                                                                   aCGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGc                      <  1:7388003/93‑1 (MQ=255)

                                                                    cGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAAACAGTTTCGCCACTTCCCCttcgt                     >  1:2903619/1‑90 (MQ=255)

                                                                     ggTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTc                    >  2:8827295/1‑93 (MQ=255)

                                                                     ggTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTc                    >  2:1385221/1‑93 (MQ=255)

                                                                      gTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCa                   <  1:7952618/93‑1 (MQ=255)

                                                                      gTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCa                   >  1:2429572/1‑93 (MQ=255)

                                                                      gTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCa                   >  2:6730471/1‑93 (MQ=255)

                                                                       tattatTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCAt                  >  2:3300439/1‑93 (MQ=255)

                                                                       tattatTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCAt                  >  2:1620944/1‑93 (MQ=255)

                                                                       tattatTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCAt                  >  2:6112556/1‑93 (MQ=255)

                                                                        attattTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATc                 <  1:3909262/93‑1 (MQ=255)

                                                                         ttattTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATcc                >  1:3494467/1‑93 (MQ=255)

                                                                         ttattTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATcc                >  1:1918732/1‑93 (MQ=255)

                                                                          tattTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCa               <  1:9466181/93‑1 (MQ=255)

                                                                          tattTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCa               >  2:399407/1‑93 (MQ=255)

                                                                          tattTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCa               >  2:2677714/1‑93 (MQ=255)

                                                                          tattTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCa               <  1:4642398/93‑1 (MQ=255)

                                                                           attTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCAt              >  2:8589221/1‑93 (MQ=255)

                                                                            ttttCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCAtt             >  1:9167590/1‑93 (MQ=255)

                                                                             tttCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTa            >  1:8247996/1‑93 (MQ=255)

                                                                             tttCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTa            <  1:5239340/93‑1 (MQ=255)

                                                                              ttCCAGATCCAGCAATTCGAGTGAATCCAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGCTTCGTCACTTCACCTTGCTCATCCATTaa           >  1:3040419/1‑93 (MQ=255)

                                                                              ttCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTaa           <  2:254484/93‑1 (MQ=255)

                                                                               tCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAAt          <  1:10024103/93‑1 (MQ=255)

                                                                                  aGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTc       <  2:3439833/93‑1 (MQ=255)

                                                                                    aTCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTg     <  2:8834373/93‑1 (MQ=255)

                                                                                     tCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTGa    >  2:8180393/1‑93 (MQ=255)

                                                                                     accAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTGa    <  2:12154/92‑1 (MQ=255)

                                                                                      ccAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTGAg   >  1:3298568/1‑93 (MQ=255)

                                                                                       cAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTGAGt  >  1:4063409/1‑93 (MQ=255)

TAAACGTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGTAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTGAGT  >  NC_000913/1655155‑1655334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CTGTAAACGTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGTAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTGAGTGAAA  >  NC_000913/1655152‑1655338

CTGTAAACGTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGC                                                                                               <  SRR4302540.5842519/94‑1 (MQ=60)

CTGTAAACGTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGC                                                                                               >  SRR4302540.4020028/1‑94 (MQ=60)

CTGTAAACGTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGC                                                                                               >  SRR4302540.4656139/1‑94 (MQ=60)

 TGTAAACGTTCTCTCTTCTCCAGCGTCTCTGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCA                                                                                              <  SRR4302540.5432158/94‑1 (MQ=60)

  GTAAACGTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAA                                                                                             <  SRR4302540.7828968/94‑1 (MQ=60)

  GTAAACGTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGACCGACCACGGTATTATTTTCCAGATCCAGCAA                                                                                             >  SRR4302540.8669889/1‑94 (MQ=60)

     AACGTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTC                                                                                          <  SRR4302540.3798980/94‑1 (MQ=60)

      ACGTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCG                                                                                         >  SRR4302540.7353919/1‑94 (MQ=60)

       CGTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGA                                                                                        <  SRR4302540.6071911/94‑1 (MQ=60)

       CGTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGA                                                                                        >  SRR4302540.8803459/1‑94 (MQ=60)

        GTCCTCTCTTCTCCAGCATCTCGGCATCACGGTAAGAAGTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAG                                                                                       <  SRR4302540.3941860/94‑1 (MQ=60)

        GTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAG                                                                                       >  SRR4302540.7815103/1‑94 (MQ=60)

         TACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGT                                                                                      <  SRR4302540.6893885/94‑1 (MQ=60)

         TACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGT                                                                                      <  SRR4302540.4933015/94‑1 (MQ=60)

         TACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGT                                                                                      <  SRR4302540.1090832/94‑1 (MQ=60)

         TACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGT                                                                                      >  SRR4302540.1181182/1‑94 (MQ=60)

          TCTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGGTCCAGCAATTCGAGTG                                                                                     <  SRR4302540.7661977/94‑1 (MQ=60)

          ACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTG                                                                                     <  SRR4302540.8357931/94‑1 (MQ=60)

           CTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGA                                                                                    >  SRR4302540.844658/1‑94 (MQ=60)

           CTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGA                                                                                    >  SRR4302540.1619852/1‑94 (MQ=60)

           CTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGA                                                                                    >  SRR4302540.4121811/1‑94 (MQ=60)

           CTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGA                                                                                    <  SRR4302540.5974311/94‑1 (MQ=60)

           CTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTACCAGATCCAGCAATTCGAGTGA                                                                                    <  SRR4302540.5974312/94‑1 (MQ=60)

            TCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAA                                                                                   <  SRR4302540.8207952/94‑1 (MQ=60)

             CTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAAT                                                                                  >  SRR4302540.3866247/1‑94 (MQ=60)

             CTCTGCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAAT                                                                                  <  SRR4302540.2825265/94‑1 (MQ=60)

               CTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCA                                                                                <  SRR4302540.8755849/94‑1 (MQ=60)

               CTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCA                                                                                <  SRR4302540.6559763/94‑1 (MQ=60)

               CTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCA                                                                                >  SRR4302540.2799977/1‑94 (MQ=60)

                TTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAA                                                                               >  SRR4302540.8401076/1‑94 (MQ=60)

                TTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAA                                                                               >  SRR4302540.2759542/1‑94 (MQ=60)

                TTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAA                                                                               >  SRR4302540.2759541/1‑94 (MQ=60)

                  CTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAA                                                                             >  SRR4302540.7610154/1‑94 (MQ=60)

                  CTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAA                                                                             >  SRR4302540.5863658/1‑94 (MQ=60)

                  CTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAA                                                                             >  SRR4302540.7106217/1‑94 (MQ=60)

                  CTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAA                                                                             >  SRR4302540.1344934/1‑94 (MQ=60)

                  CTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAA                                                                             >  SRR4302540.1344933/1‑94 (MQ=60)

                   TCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAAC                                                                            <  SRR4302540.6513696/94‑1 (MQ=60)

                   TCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAAC                                                                            <  SRR4302540.9041814/94‑1 (MQ=60)

                   TCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAAC                                                                            >  SRR4302540.8092212/1‑94 (MQ=60)

                    CCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACA                                                                           <  SRR4302540.7898408/94‑1 (MQ=60)

                    CCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACA                                                                           >  SRR4302540.7404981/1‑94 (MQ=60)

                    CCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACA                                                                           >  SRR4302540.1326371/1‑94 (MQ=60)

                    CCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACA                                                                           <  SRR4302540.1982670/94‑1 (MQ=60)

                    CCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACA                                                                           <  SRR4302540.2038452/94‑1 (MQ=60)

                    CCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACA                                                                           <  SRR4302540.3052959/94‑1 (MQ=60)

                     CAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAG                                                                          >  SRR4302540.3959470/1‑94 (MQ=60)

                     CAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAG                                                                          <  SRR4302540.5436863/94‑1 (MQ=60)

                     CAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAC                                                                          >  SRR4302540.5131208/1‑94 (MQ=60)

                      AGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGC                                                                         >  SRR4302540.1258297/1‑94 (MQ=60)

                      AGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGC                                                                         >  SRR4302540.4852969/1‑94 (MQ=60)

                      AGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGC                                                                         >  SRR4302540.8876623/1‑94 (MQ=60)

                        CGTGTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCT                                                                       <  SRR4302540.7938957/94‑1 (MQ=60)

                        CGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCT                                                                       >  SRR4302540.4201615/1‑94 (MQ=60)

                        CGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCT                                                                       >  SRR4302540.5019051/1‑94 (MQ=60)

                        CGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCT                                                                       <  SRR4302540.7938958/94‑1 (MQ=60)

                         GTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTT                                                                      <  SRR4302540.1499350/94‑1 (MQ=60)

                         GTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGGGAATCAACACAGCCTT                                                                      >  SRR4302540.4088553/1‑94 (MQ=60)

                          TCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTC                                                                     <  SRR4302540.4646985/94‑1 (MQ=60)

                          TCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTC                                                                     >  SRR4302540.3118601/1‑94 (MQ=60)

                            TCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGCGAATCAAAACAGCCTTCTT                                                                   >  SRR4302540.9123883/1‑94 (MQ=60)

                             CGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTC                                                                  >  SRR4302540.4838088/1‑94 (MQ=60)

                             CGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTC                                                                  >  SRR4302540.546844/1‑94 (MQ=60)

                              GGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCC                                                                 <  SRR4302540.7053570/94‑1 (MQ=60)

                              GGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCC                                                                 <  SRR4302540.5061518/94‑1 (MQ=60)

                              GGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCC                                                                 <  SRR4302540.7398305/94‑1 (MQ=60)

                              GGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCC                                                                 <  SRR4302540.1659037/94‑1 (MQ=60)

                              GGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCC                                                                 <  SRR4302540.5082614/94‑1 (MQ=60)

                              GGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCC                                                                 <  SRR4302540.621753/94‑1 (MQ=60)

                              GGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCC                                                                 <  SRR4302540.592507/94‑1 (MQ=60)

                                CATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGA                                                               <  SRR4302540.946032/94‑1 (MQ=60)

                                 ATCACGTTAATAATTGGCGTCCAGTACCAGTGCGACCACGGTATTATTTTCCAGATCCAGTAATTCGAGTGAATCAAATCAGCCTTCTTCCGAC                                                              >  SRR4302540.9062859/1‑94 (MQ=60)

                                 ATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGAC                                                              >  SRR4302540.5253392/1‑94 (MQ=60)

                                 ATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGAC                                                              >  SRR4302540.2731092/1‑94 (MQ=60)

                                 ATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGAC                                                              >  SRR4302540.3344887/1‑94 (MQ=60)

                                 ATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGAC                                                              >  SRR4302540.1348200/1‑94 (MQ=60)

                                 ATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGAA                                                              >  SRR4302540.7439841/1‑94 (MQ=60)

                                   CACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAA                                                            >  SRR4302540.1999202/1‑94 (MQ=60)

                                   CACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAA                                                            >  SRR4302540.6055012/1‑94 (MQ=60)

                                    ACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAA                                                           >  SRR4302540.2429616/1‑94 (MQ=60)

                                     CGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAG                                                          >  SRR4302540.7045109/1‑94 (MQ=60)

                                     CGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAG                                                          <  SRR4302540.6806836/94‑1 (MQ=60)

                                     CGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTACGACAAAG                                                          >  SRR4302540.8099133/1‑94 (MQ=60)

                                      GGTAAGAATTGGCGTCCAGTACAAGAGCGACCACGGGATTATTTTCCAGATCCAGTAATTCGAGTGAAGCAAAACAGCCTTCTTCCGACAAAGT                                                         <  SRR4302540.3869429/94‑1 (MQ=60)

                                        TAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCC                                                       <  SRR4302540.4692173/94‑1 (MQ=60)

                                         AATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCC                                                      <  SRR4302540.8604109/94‑1 (MQ=60)

                                         AATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCC                                                      >  SRR4302540.5808095/1‑94 (MQ=60)

                                         AATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCC                                                      <  SRR4302540.8604117/94‑1 (MQ=60)

                                          ATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCA                                                     <  SRR4302540.8353771/94‑1 (MQ=60)

                                          ATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCA                                                     >  SRR4302540.811494/1‑94 (MQ=60)

                                           TAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAG                                                    <  SRR4302540.8512448/94‑1 (MQ=60)

                                           TAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAG                                                    <  SRR4302540.2935471/94‑1 (MQ=60)

                                           TAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAG                                                    <  SRR4302540.8512788/94‑1 (MQ=60)

                                           TAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAG                                                    <  SRR4302540.4541907/94‑1 (MQ=60)

                                           TAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAG                                                    <  SRR4302540.4970396/94‑1 (MQ=60)

                                             ATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAA                                                  >  SRR4302540.2588968/1‑94 (MQ=60)

                                              TTTGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAA                                                 <  SRR4302540.1997631/94‑1 (MQ=60)

                                              TTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAA                                                 <  SRR4302540.5208981/94‑1 (MQ=60)

                                              GTGGCGTCCAGTACCAGAGCGACCACTGTATTATTGTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAA                                                 <  SRR4302540.10148324/94‑1 (MQ=60)

                                               TGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAAC                                                <  SRR4302540.4416188/94‑1 (MQ=60)

                                               TGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAAC                                                >  SRR4302540.8851349/1‑94 (MQ=60)

                                                GGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACA                                               <  SRR4302540.5653682/94‑1 (MQ=60)

                                                  CGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGACACACG                                             >  SRR4302540.3894769/1‑94 (MQ=60)

                                                  CGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACG                                             >  SRR4302540.766132/1‑94 (MQ=60)

                                                  CGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACG                                             >  SRR4302540.3894770/1‑94 (MQ=60)

                                                  CGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACG                                             >  SRR4302540.7723702/1‑94 (MQ=60)

                                                  CGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACG                                             >  SRR4302540.7723703/1‑94 (MQ=60)

                                                  CGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACG                                             >  SRR4302540.7376004/1‑94 (MQ=60)

                                                  CGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCAACCAATTCGAGTGAATCAAAACGTCCTTCTTTCGACAAAACCCCAAAAACACG                                             >  SRR4302540.765830/1‑94 (MQ=55)

                                                   GTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGT                                            <  SRR4302540.5994240/94‑1 (MQ=60)

                                                   GTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGT                                            >  SRR4302540.3241565/1‑94 (MQ=60)

                                                    TCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTT                                           <  SRR4302540.5765635/94‑1 (MQ=60)

                                                    TCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTT                                           <  SRR4302540.8662804/94‑1 (MQ=60)

                                                     CCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTT                                          <  SRR4302540.1746279/94‑1 (MQ=60)

                                                     CCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTT                                          <  SRR4302540.1722194/94‑1 (MQ=60)

                                                     CCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTT                                          >  SRR4302540.1580685/1‑94 (MQ=60)

                                                     CCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTT                                          <  SRR4302540.1134958/94‑1 (MQ=60)

                                                      CAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTC                                         <  SRR4302540.363129/94‑1 (MQ=60)

                                                       AGTACCCGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCG                                        <  SRR4302540.7731117/94‑1 (MQ=60)

                                                       AGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCG                                        <  SRR4302540.7731118/94‑1 (MQ=60)

                                                       AGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCG                                        <  SRR4302540.7081383/94‑1 (MQ=60)

                                                       AGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCG                                        <  SRR4302540.6819722/94‑1 (MQ=60)

                                                       AGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCG                                        >  SRR4302540.5166024/1‑94 (MQ=60)

                                                       AGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCG                                        >  SRR4302540.6477090/1‑94 (MQ=60)

                                                       AGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCG                                        >  SRR4302540.5795776/1‑94 (MQ=60)

                                                        GTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGT                                       <  SRR4302540.7079823/94‑1 (MQ=60)

                                                          ACCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCA                                     <  SRR4302540.5332892/94‑1 (MQ=60)

                                                           CCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCAC                                    <  SRR4302540.6876834/94‑1 (MQ=60)

                                                           CCAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCAC                                    <  SRR4302540.9938501/94‑1 (MQ=60)

                                                           CCAGAGCGACCACCGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCAC                                    <  SRR4302540.6876832/94‑1 (MQ=60)

                                                            CAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACT                                   >  SRR4302540.6073525/1‑94 (MQ=60)

                                                            CAGAGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACT                                   >  SRR4302540.6073524/1‑94 (MQ=60)

                                                               AGCGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCA                                <  SRR4302540.9461420/94‑1 (MQ=60)

                                                                 CGACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACC                              >  SRR4302540.9158035/1‑94 (MQ=60)

                                                                  GACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCT                             <  SRR4302540.5966465/94‑1 (MQ=60)

                                                                  GACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCT                             >  SRR4302540.1151313/1‑94 (MQ=60)

                                                                   ACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTT                            <  SRR4302540.1995701/94‑1 (MQ=60)

                                                                   ACCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTT                            <  SRR4302540.8067904/94‑1 (MQ=60)

                                                                    CCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTG                           <  SRR4302540.999055/94‑1 (MQ=60)

                                                                    CCACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTG                           >  SRR4302540.4843288/1‑94 (MQ=60)

                                                                    CCACGGTATTATTTTCCAGATCCAGCAATTCGAGAGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTG                           >  SRR4302540.9638800/1‑94 (MQ=60)

                                                                     CACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGC                          >  SRR4302540.6092350/1‑94 (MQ=60)

                                                                     CACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGC                          >  SRR4302540.138595/1‑94 (MQ=60)

                                                                      ACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAAacagtttcgccacttccccttcgt                         >  SRR4302540.2935315/1‑70 (MQ=60)

                                                                      ACGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCT                         <  SRR4302540.7470320/94‑1 (MQ=60)

                                                                       CGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTC                        >  SRR4302540.622549/1‑94 (MQ=60)

                                                                       CGGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTC                        <  SRR4302540.5605303/94‑1 (MQ=60)

                                                                        GGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCA                       >  SRR4302540.7302550/1‑94 (MQ=60)

                                                                        GGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCA                       <  SRR4302540.9711796/94‑1 (MQ=60)

                                                                        GGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCA                       <  SRR4302540.10151022/94‑1 (MQ=60)

                                                                        GGTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCA                       >  SRR4302540.2455747/1‑94 (MQ=60)

                                                                         GTATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCAT                      <  SRR4302540.8045319/94‑1 (MQ=60)

                                                                          TATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATC                     >  SRR4302540.670505/1‑94 (MQ=60)

                                                                           ATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCC                    >  SRR4302540.1939666/1‑94 (MQ=60)

                                                                           ATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCC                    <  SRR4302540.3951632/94‑1 (MQ=60)

                                                                           ATTATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCC                    >  SRR4302540.3532530/1‑94 (MQ=60)

                                                                             TATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCAT                  <  SRR4302540.4692101/94‑1 (MQ=60)

                                                                             TATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCAT                  <  SRR4302540.9578479/94‑1 (MQ=60)

                                                                              ATTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATT                 >  SRR4302540.9277578/1‑94 (MQ=60)

                                                                               TTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTA                >  SRR4302540.8343865/1‑94 (MQ=60)

                                                                               TTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTA                >  SRR4302540.5184601/1‑94 (MQ=60)

                                                                               TTTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGGTTCGTGACTTCACCTTGCTCATCCATTA                >  SRR4302540.1282391/1‑94 (MQ=60)

                                                                                TTTCCAGATCCAGCAATTCGAGTGAATCCAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGCTTCGTCACTTCACCTTGCTCATCCATTAA               >  SRR4302540.3073788/1‑94 (MQ=60)

                                                                                TTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAA               >  SRR4302540.2248928/1‑94 (MQ=60)

                                                                                TTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAA               <  SRR4302540.5296497/94‑1 (MQ=60)

                                                                                TTTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAA               <  SRR4302540.5296496/94‑1 (MQ=60)

                                                                                 TTCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAAT              >  SRR4302540.5273437/1‑94 (MQ=60)

                                                                                  TCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATG             <  SRR4302540.1406186/94‑1 (MQ=60)

                                                                                  TCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATG             <  SRR4302540.10140745/94‑1 (MQ=60)

                                                                                  TCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATG             >  SRR4302540.8314045/1‑94 (MQ=60)

                                                                                  TCCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATG             >  SRR4302540.2034169/1‑94 (MQ=60)

                                                                                   CCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTGGCAACTTCACCTTGCTCATCCATTAATtc            >  SRR4302540.334894/1‑92 (MQ=60)

                                                                                   CCAGATCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGT            >  SRR4302540.1793908/1‑94 (MQ=60)

                                                                                        TCCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTGAG       >  SRR4302540.3334674/1‑94 (MQ=60)

                                                                                         CCAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTGAGT      >  SRR4302540.4107221/1‑94 (MQ=60)

                                                                                          CAGCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTGAGTG     >  SRR4302540.4934394/1‑94 (MQ=60)

                                                                                            GCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTGAGTGAA   <  SRR4302540.228858/94‑1 (MQ=60)

                                                                                            GCAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTGAGTGAA   <  SRR4302540.3536210/94‑1 (MQ=60)

                                                                                            GCAATTCAAGTGAATCAAAACAGCCTACTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTGAGTGAA   <  SRR4302540.679036/94‑1 (MQ=60)

                                                                                             CAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTGAGTGAAA  >  SRR4302540.4896748/1‑94 (MQ=60)

CTGTAAACGTACTCTCTTCTCCAGCGTCTCGGCATCACGGTAATAATTGGCGTCCAGTACCAGAGCGACCACGGTATTATTTTCCAGATCCAGTAATTCGAGTGAATCAAAACAGCCTTCTTCCGACAAAGTCCCAGAAACACGTTTCGTCACTTCACCTTGCTCATCCATTAATGTCTGAGTGAAA  >  NC_000913/1655152‑1655338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`