Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,598,927 |
T→C |
L113L (TTA→TTG) |
ydeW ← |
putative transcriptional regulator, sorC family |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,598,927 | 0 | T | C | 99.5%
| 617.9
/ NA
| 189 | L113L (TTA→TTG) | ydeW | putative transcriptional regulator, sorC family |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (92/96); total (93/96) |
| Fisher's exact test for biased strand distribution p-value = 4.92e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 191 total aligned reads displayed.
TGCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGTAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCAG > NC_000913/1598838‑1599016
|
gCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAAc < 1:1336136/93‑1 (MQ=255)
cTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACt > 1:5819980/1‑93 (MQ=255)
cTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACt < 2:5003065/93‑1 (MQ=255)
tgtgACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtc > 2:2100078/1‑93 (MQ=255)
gtgACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtca > 2:5385422/1‑93 (MQ=255)
gtgACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtca < 2:2579692/93‑1 (MQ=255)
tgACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtcat < 1:4374617/93‑1 (MQ=255)
gACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtcatc < 2:2171031/93‑1 (MQ=255)
gACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtcatc > 2:4831770/1‑93 (MQ=255)
gACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtcatc > 1:3804286/1‑93 (MQ=255)
gACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACtcatc > 2:2750438/1‑93 (MQ=255)
cGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCaa < 1:4959088/93‑1 (MQ=255)
cGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCaa > 2:3881718/1‑93 (MQ=255)
gAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAAc < 1:3750841/93‑1 (MQ=255)
aaaTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACa > 1:2246120/1‑93 (MQ=255)
aaaTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACa < 2:3679537/93‑1 (MQ=255)
aaTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACat < 1:1470751/93‑1 (MQ=255)
aTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACata < 1:5729491/93‑1 (MQ=255)
aTAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACata < 2:2914094/93‑1 (MQ=255)
aaaaCCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATg < 1:1048849/93‑1 (MQ=255)
aaCCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcg < 2:303943/93‑1 (MQ=255)
aCCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgc < 2:4070472/93‑1 (MQ=255)
aCCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgc > 1:4710313/1‑93 (MQ=255)
cACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccg < 1:2545827/93‑1 (MQ=255)
cTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgacgcg > 1:976077/1‑93 (MQ=255)
ttAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccgcgc > 2:3270727/1‑93 (MQ=255)
tAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccgcgcc > 2:4512018/1‑93 (MQ=255)
tAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATgcgccgcgcc > 1:1575032/1‑93 (MQ=255)
aaGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCt < 2:94855/93‑1 (MQ=255)
aGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTa < 1:1705263/93‑1 (MQ=255)
aGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTa < 1:6196663/93‑1 (MQ=255)
gCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTAt > 2:5081531/1‑93 (MQ=255)
gCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTAt > 1:2225285/1‑93 (MQ=255)
gCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTAt > 1:2476668/1‑93 (MQ=255)
gTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATcc > 2:3496077/1‑93 (MQ=255)
tGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATcccc < 1:113744/93‑1 (MQ=255)
tGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATcccc < 1:3094180/93‑1 (MQ=255)
tGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATcccc < 1:2873473/93‑1 (MQ=255)
gCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCa > 2:3317242/1‑93 (MQ=255)
gCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCa > 1:2145289/1‑93 (MQ=255)
gCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCa < 1:1755198/93‑1 (MQ=255)
aGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGt < 1:5212205/93‑1 (MQ=255)
aGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGt > 2:2104051/1‑93 (MQ=255)
aGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGt < 2:4127371/93‑1 (MQ=255)
gCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTc < 2:5619422/93‑1 (MQ=255)
gTATTCATGGTTGCCTCGCCAAAACCAATCGCCCGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGc > 1:3600061/1‑93 (MQ=255)
tATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGcc > 1:506243/1‑93 (MQ=255)
tATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGcc > 1:3285094/1‑93 (MQ=255)
tATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACAGATGCGCCGCGCCTATCCCCAGTCGcc < 2:5526382/93‑1 (MQ=255)
aTTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGccc < 1:5944759/93‑1 (MQ=255)
ttCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCa > 2:5135847/1‑93 (MQ=255)
tCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCAc > 2:5266358/1‑93 (MQ=255)
cATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCAcc > 2:3978254/1‑93 (MQ=255)
tGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGa < 1:1441574/93‑1 (MQ=255)
tGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGa < 1:5286052/93‑1 (MQ=255)
tGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGa > 1:6155567/1‑93 (MQ=255)
ggTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCgcc > 1:3540789/1‑91 (MQ=255)
gTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACa < 2:778995/93‑1 (MQ=255)
gTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACa < 2:4798673/93‑1 (MQ=255)
cTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGc < 1:4119610/93‑1 (MQ=255)
gCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATc < 1:5461013/93‑1 (MQ=255)
ccAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATcc < 2:4176124/93‑1 (MQ=255)
cAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCg > 2:2260802/1‑93 (MQ=255)
aaaaCCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGc > 2:5648257/1‑93 (MQ=255)
aaCCAATCGCCAGCATCTGTTGTGTTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCaa < 2:3253695/93‑1 (MQ=255)
aCCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAg < 1:5371336/93‑1 (MQ=255)
aCCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAg < 2:316014/93‑1 (MQ=255)
ccAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGc > 2:1298490/1‑93 (MQ=255)
cAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGcc < 1:1173617/93‑1 (MQ=255)
cAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGcc > 1:2567930/1‑93 (MQ=255)
cAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGcc > 2:2539853/1‑93 (MQ=255)
aaTCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGccc > 1:363803/1‑93 (MQ=255)
aTCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCa < 2:452478/93‑1 (MQ=255)
tCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAg < 2:6172811/93‑1 (MQ=255)
cGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAgg < 2:1370968/93‑1 (MQ=255)
gCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCACGCCCAggg > 2:5176738/1‑93 (MQ=255)
gCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAggg < 1:4505905/93‑1 (MQ=255)
gCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAggg > 2:3697374/1‑93 (MQ=255)
ccAGAATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGa > 2:1123827/1‑93 (MQ=255)
cAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGAt > 2:321638/1‑93 (MQ=255)
aGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATc > 1:3625641/1‑93 (MQ=255)
aGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATc > 2:1262509/1‑93 (MQ=255)
aGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATc < 2:334827/93‑1 (MQ=255)
cATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCAc < 1:4364876/93‑1 (MQ=255)
tCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGGTCGccc > 1:1557800/1‑93 (MQ=255)
tCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCAccc > 2:3640871/1‑93 (MQ=255)
tCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGCGATCAccc > 1:2376166/1‑93 (MQ=255)
cTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCg < 1:5574440/93‑1 (MQ=255)
tgttgtGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCgg > 2:3448586/1‑93 (MQ=255)
tgttgtGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCgg > 2:1602462/1‑93 (MQ=255)
gttgtGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGa < 2:3580981/93‑1 (MQ=255)
gttgtGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGa > 2:674917/1‑93 (MQ=255)
gttgtGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGa > 1:4898370/1‑93 (MQ=255)
tgGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATg < 1:5183569/93‑1 (MQ=255)
gTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGtt > 2:1497774/1‑93 (MQ=255)
gTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGtt < 1:912064/93‑1 (MQ=255)
gTTGAAGCAAACTCATCAACATATGCGCCGCGCCTACCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCCCCCGGACATGtt < 2:1827126/93‑1 (MQ=255)
ttGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTg < 1:5103944/93‑1 (MQ=255)
gAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCa < 2:4781673/93‑1 (MQ=255)
aaGCAAACTCATCAATATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCAg > 2:3968542/1‑93 (MQ=255)
|
TGCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGTAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCAG > NC_000913/1598838‑1599016
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTTGCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGTAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCAGCGAA > NC_000913/1598835‑1599020
|
ATTTGCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCA > SRR4302533.171561/1‑94 (MQ=60)
ATTTGCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCA > SRR4302533.5134766/1‑94 (MQ=60)
GCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACT < SRR4302533.1344154/94‑1 (MQ=60)
GCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACT > SRR4302533.5855137/1‑94 (MQ=60)
GCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACT < SRR4302533.5306575/94‑1 (MQ=60)
GTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCAT < SRR4302533.5033128/94‑1 (MQ=60)
TGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATC < SRR4302533.4401023/94‑1 (MQ=60)
TGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATC > SRR4302533.3827565/1‑94 (MQ=60)
GACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCA > SRR4302533.5232422/1‑94 (MQ=60)
CGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAAC < SRR4302533.4989132/94‑1 (MQ=60)
GAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACA > SRR4302533.2259999/1‑94 (MQ=60)
GAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACA < SRR4302533.3773838/94‑1 (MQ=60)
AATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATA < SRR4302533.4525780/94‑1 (MQ=60)
AATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATA < SRR4302533.1479641/94‑1 (MQ=60)
ATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATAT < SRR4302533.5764088/94‑1 (MQ=60)
ATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATAT < SRR4302533.6007561/94‑1 (MQ=60)
TAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATG > SRR4302533.3797245/1‑94 (MQ=60)
AAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGC < SRR4302533.1055016/94‑1 (MQ=60)
AAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCG > SRR4302533.1702530/1‑94 (MQ=60)
AAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCG < SRR4302533.1163886/94‑1 (MQ=60)
AAACCACTTAAGCGTTGCAGCGTATTCATGCTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCG < SRR4302533.363915/94‑1 (MQ=60)
AACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGC > SRR4302533.4738861/1‑94 (MQ=60)
CCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCG > SRR4302533.4392033/1‑94 (MQ=60)
CACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGC < SRR4302533.2561491/94‑1 (MQ=60)
ACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCG < SRR4302533.4613821/94‑1 (MQ=60)
ACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCG > SRR4302533.5900709/1‑94 (MQ=60)
ACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGACGCG > SRR4302533.981802/1‑94 (MQ=60)
CTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGC > SRR4302533.3746995/1‑94 (MQ=60)
TTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCC > SRR4302533.1576966/1‑94 (MQ=60)
TTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCC > SRR4302533.1584518/1‑94 (MQ=60)
AGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTAT > SRR4302533.2491943/1‑94 (MQ=60)
AGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTAT < SRR4302533.6233839/94‑1 (MQ=60)
AGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTAT < SRR4302533.5594897/94‑1 (MQ=60)
AGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTAT < SRR4302533.1715589/94‑1 (MQ=60)
AGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTAT > SRR4302533.2239024/1‑94 (MQ=60)
GTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCC > SRR4302533.4810644/1‑94 (MQ=60)
TGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCA < SRR4302533.3113204/94‑1 (MQ=60)
TGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCA > SRR4302533.2158502/1‑94 (MQ=60)
TGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCA < SRR4302533.2891153/94‑1 (MQ=60)
TGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCA < SRR4302533.114467/94‑1 (MQ=60)
GCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAG < SRR4302533.1765889/94‑1 (MQ=60)
CAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTAATCAACATATGCGCCGCGCCTATCCCCAGT > SRR4302533.1843546/1‑94 (MQ=60)
AGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTC < SRR4302533.5243594/94‑1 (MQ=60)
CGTATTCATGGTTGCCTCGCCAAAACCAATCGCCCGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGC > SRR4302533.3622209/1‑94 (MQ=60)
CGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGC < SRR4302533.2614028/94‑1 (MQ=60)
GTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCC > SRR4302533.3305370/1‑94 (MQ=60)
GTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCC < SRR4302533.3947895/94‑1 (MQ=60)
GTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCC > SRR4302533.509247/1‑94 (MQ=60)
GTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCC > SRR4302533.2402143/1‑94 (MQ=60)
ATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCA < SRR4302533.5980709/94‑1 (MQ=60)
CATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCG < SRR4302533.1458290/94‑1 (MQ=60)
ATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGA > SRR4302533.6192600/1‑94 (MQ=60)
TTGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGAC < SRR4302533.1717478/94‑1 (MQ=60)
TGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGCC > SRR4302533.3562605/1‑94 (MQ=60)
TGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGAC < SRR4302533.1450274/94‑1 (MQ=60)
TGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGAC < SRR4302533.5317715/94‑1 (MQ=60)
GTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACAT < SRR4302533.4964544/94‑1 (MQ=60)
CCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGC < SRR4302533.3148663/94‑1 (MQ=60)
CTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCA < SRR4302533.4144629/94‑1 (MQ=60)
GCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCC < SRR4302533.5493914/94‑1 (MQ=60)
GCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCC < SRR4302533.1249628/94‑1 (MQ=60)
AACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAG < SRR4302533.5443424/94‑1 (MQ=60)
AACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAG > SRR4302533.517473/1‑94 (MQ=60)
ACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGC < SRR4302533.5403607/94‑1 (MQ=60)
ACCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGC > SRR4302533.2212186/1‑94 (MQ=60)
CCAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCC > SRR4302533.2583733/1‑94 (MQ=60)
CAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCC > SRR4302533.4337451/1‑94 (MQ=60)
CAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCC < SRR4302533.1180660/94‑1 (MQ=60)
CAATCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCC > SRR4302533.366012/1‑94 (MQ=60)
TCGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGG < SRR4302533.968427/94‑1 (MQ=60)
CGCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGG < SRR4302533.1556324/94‑1 (MQ=60)
GCCAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGA < SRR4302533.4533199/94‑1 (MQ=60)
CAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATC > SRR4302533.2352126/1‑94 (MQ=60)
CAGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATC > SRR4302533.3647949/1‑94 (MQ=60)
AGCATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCA > SRR4302533.2573185/1‑94 (MQ=60)
CATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACC < SRR4302533.4391227/94‑1 (MQ=60)
ATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGGTCGCCC > SRR4302533.1567180/1‑94 (MQ=60)
ATCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGCGATCACCC > SRR4302533.2390868/1‑94 (MQ=60)
TCTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCG < SRR4302533.5810490/94‑1 (MQ=60)
CTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTCTCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGG > SRR4302533.3403493/1‑94 (MQ=60)
CTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGG < SRR4302533.5608128/94‑1 (MQ=60)
CTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGG < SRR4302533.25094/94‑1 (MQ=60)
CTGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGG < SRR4302533.87855/94‑1 (MQ=60)
TGTTGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGA > SRR4302533.4928051/1‑94 (MQ=60)
TGTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACAT < SRR4302533.5391403/94‑1 (MQ=60)
GTGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATG > SRR4302533.3596030/1‑94 (MQ=60)
TGGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGT < SRR4302533.5214862/94‑1 (MQ=60)
GTTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTT < SRR4302533.1394421/94‑1 (MQ=60)
GGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTT < SRR4302533.5754899/94‑1 (MQ=60)
GGTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTT > SRR4302533.3081548/1‑94 (MQ=60)
GTTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTG < SRR4302533.917414/94‑1 (MQ=60)
TTGAAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGC < SRR4302533.5134774/94‑1 (MQ=60)
AAGCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCAGC > SRR4302533.5889958/1‑94 (MQ=60)
GCAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCAGCGA > SRR4302533.4174413/1‑94 (MQ=60)
CAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCAGCGAA > SRR4302533.1975570/1‑94 (MQ=60)
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ATTTGCTGTGACGAAATAAAACCACTTAAGCGTTGCAGCGTATTCATGGTTGCCTCGCCAAAACCAATCGCCAGCATCTGTTGTGGTTGAAGTAAACTCATCAACATATGCGCCGCGCCTATCCCCAGTCGCCCACCGACATCAGCATCCGCAAGCCCAGGGATCACCCGGACATGTTGCAGCGAA > NC_000913/1598835‑1599020
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
