Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,612,018 |
C→T |
G245D (GGT→GAT) |
b1525 ← |
putative aldehyde dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,612,018 | 0 | C | T | 99.4%
| 645.4
/ NA
| 174 | G245D (GGT→GAT) | b1525 | putative aldehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (93/80); minor base A (1/0); total (94/80) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 180 total aligned reads displayed.
CCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAACCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACA > NC_000913/1611929‑1612107
|
ccTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGc > 1:3171222/1‑93 (MQ=255)
ccTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGAACCGAATCGc > 2:4868419/1‑93 (MQ=255)
tGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGccc < 2:5253571/93‑1 (MQ=255)
tCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAg < 2:6249954/93‑1 (MQ=255)
cGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGtt < 2:538888/93‑1 (MQ=255)
cGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGtt < 1:4758398/93‑1 (MQ=255)
ggTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTc > 2:1149903/1‑93 (MQ=255)
gTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTcc > 1:3554347/1‑93 (MQ=255)
tATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCa < 1:1536598/93‑1 (MQ=255)
tATTCTGATAACGTCCGCCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCa < 1:6199801/93‑1 (MQ=255)
aTTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAg > 1:6041435/1‑93 (MQ=255)
aTTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAg < 1:2767402/93‑1 (MQ=255)
ttCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGt > 2:2135319/1‑93 (MQ=255)
ttCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGt < 2:3701595/93‑1 (MQ=255)
ttCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGt > 1:414749/1‑93 (MQ=255)
cTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTAc > 2:5382160/1‑93 (MQ=255)
cTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTAc > 1:2674721/1‑93 (MQ=255)
tGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACg > 2:5938078/1‑93 (MQ=255)
gATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGc > 1:2090757/1‑93 (MQ=255)
gATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGc > 1:4146369/1‑93 (MQ=255)
tAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCAt > 2:2755696/1‑93 (MQ=255)
tAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCAt < 1:1043488/93‑1 (MQ=255)
aaCGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCAtt < 2:3985123/93‑1 (MQ=255)
cGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCAtttt > 2:3379694/1‑93 (MQ=255)
tCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCAtttttt < 2:3704954/93‑1 (MQ=255)
ccGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTc < 2:676794/93‑1 (MQ=255)
cGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCa > 2:284974/1‑93 (MQ=255)
ggCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAg < 1:6161954/93‑1 (MQ=255)
cgCTCCCGCCCCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAg < 1:4753425/92‑1 (MQ=255)
gCTGCCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGt < 1:5203004/93‑1 (MQ=255)
gCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGt < 1:202854/93‑1 (MQ=255)
gCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGt < 1:5933168/93‑1 (MQ=255)
cTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTg > 1:4212351/1‑93 (MQ=255)
tACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGc < 2:1802409/93‑1 (MQ=255)
tACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGc > 1:2335551/1‑93 (MQ=255)
aCCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGcc > 1:5642906/1‑93 (MQ=255)
ccgccgCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCg > 2:2977115/1‑93 (MQ=255)
ccgccgCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCg > 1:2917443/1‑93 (MQ=255)
cgccgcTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGc < 2:1460793/93‑1 (MQ=255)
cgccgcTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGc > 2:728352/1‑93 (MQ=255)
ccgcTTTCACCGCTAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTc > 1:3833696/1‑93 (MQ=255)
ccgcTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTc < 2:4336524/93‑1 (MQ=255)
cgcTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTcc < 2:3508852/93‑1 (MQ=255)
gcTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCa > 2:3120617/1‑93 (MQ=255)
gcTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCa > 2:469702/1‑93 (MQ=255)
gcTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCa < 2:1233936/93‑1 (MQ=255)
tttCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGc > 2:2560071/1‑93 (MQ=255)
ttCCCCGCCAGTCCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGcc < 2:5882957/93‑1 (MQ=255)
ttCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGcc < 2:3571337/93‑1 (MQ=255)
tCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCt < 2:2713475/93‑1 (MQ=255)
cccGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCtgt < 1:812033/92‑1 (MQ=255)
gCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTgcg < 1:4556867/93‑1 (MQ=255)
gCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTgcg > 2:4486652/1‑93 (MQ=255)
ccAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTgcgc > 1:2240326/1‑93 (MQ=255)
aGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCa > 2:4416031/1‑93 (MQ=255)
gTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCaa < 1:526027/93‑1 (MQ=255)
gTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCaa > 1:2137713/1‑93 (MQ=255)
gTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCaa > 2:3138481/1‑93 (MQ=255)
ttCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAAt > 1:4025920/1‑93 (MQ=255)
ttCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAAt < 2:1005068/93‑1 (MQ=255)
ccAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAg < 1:5529071/93‑1 (MQ=255)
ccAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAg > 1:5308978/1‑93 (MQ=255)
cAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGc > 2:2008546/1‑93 (MQ=255)
cAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGc < 2:5185651/93‑1 (MQ=255)
cAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGc < 1:1000843/93‑1 (MQ=255)
gATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCg > 1:2551111/1‑93 (MQ=255)
aTCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGc > 1:1695705/1‑93 (MQ=255)
cGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTc < 2:4385814/93‑1 (MQ=255)
ggCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTcc > 2:1171501/1‑93 (MQ=255)
ggCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTcc > 1:3472703/1‑93 (MQ=255)
tCGTTAAGCACAATAAACGGATCCGAATTGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCa > 1:1306312/1‑93 (MQ=255)
tCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCa > 1:1485442/1‑93 (MQ=255)
tCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCa > 1:3159348/1‑93 (MQ=255)
tCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCa > 2:6001863/1‑93 (MQ=255)
tCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCa > 1:528337/1‑93 (MQ=255)
cGTGAAGCACAATAAACGGAACCGAAACGCCCAGGTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCAc > 1:6306404/1‑93 (MQ=255)
ttAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGa > 2:556184/1‑93 (MQ=255)
aaGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAac > 1:1820315/1‑93 (MQ=255)
aGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAaca < 2:1649483/93‑1 (MQ=255)
gCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAacac < 1:2570591/93‑1 (MQ=255)
gCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAacac < 2:2547764/93‑1 (MQ=255)
cacaATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACt < 1:3368006/93‑1 (MQ=255)
cacaATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACt < 2:1298930/93‑1 (MQ=255)
caATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTc < 2:4172063/93‑1 (MQ=255)
caATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTc < 1:4902778/93‑1 (MQ=255)
caATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTc < 1:1106548/93‑1 (MQ=255)
aaTAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTcc < 1:3639578/93‑1 (MQ=255)
aTAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCg < 2:3203486/93‑1 (MQ=255)
aaaCGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGt < 2:2255777/93‑1 (MQ=255)
aCGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCa < 2:4511060/93‑1 (MQ=255)
cGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCAc > 2:117792/1‑93 (MQ=255)
cGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCAc < 2:4836576/93‑1 (MQ=255)
gATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCg > 1:3284569/1‑93 (MQ=255)
aTCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGt > 2:4789708/1‑93 (MQ=255)
aTCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGt > 1:3545822/1‑93 (MQ=255)
cGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGAc < 1:1448400/93‑1 (MQ=255)
cGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGAc < 2:5874025/93‑1 (MQ=255)
cGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGAc > 1:2453259/1‑93 (MQ=255)
gAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGAca > 2:1583292/1‑93 (MQ=255)
gAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGAca > 2:2220388/1‑93 (MQ=255)
|
CCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAACCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACA > NC_000913/1611929‑1612107
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATACCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAACCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACAGC > NC_000913/1611925‑1612109
|
CATACCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAAT > SRR4302533.5131427/1‑94 (MQ=60)
CATACCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAAT > SRR4302533.4365137/1‑94 (MQ=60)
ACCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGC > SRR4302533.3190740/1‑94 (MQ=60)
TGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCA < SRR4302533.2531698/94‑1 (MQ=60)
CGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTC > SRR4302533.6042087/1‑94 (MQ=60)
CGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTC < SRR4302533.4787267/94‑1 (MQ=60)
CGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGCTAAGCACAATAAACGGATACGAATCGCCCAGTTC > SRR4302533.363349/1‑94 (MQ=60)
GGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCC > SRR4302533.4218164/1‑94 (MQ=60)
GGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCC > SRR4302533.3576247/1‑94 (MQ=60)
GTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGAGCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCA < SRR4302533.2903149/94‑1 (MQ=60)
TATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAG > SRR4302533.4280633/1‑94 (MQ=60)
TATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAG < SRR4302533.1545829/94‑1 (MQ=60)
TATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAG > SRR4302533.6078043/1‑94 (MQ=60)
TATTCTGATAACGTCCGCCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAG < SRR4302533.6236989/94‑1 (MQ=60)
ATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGT > SRR4302533.417241/1‑94 (MQ=60)
ATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGT < SRR4302533.2784377/94‑1 (MQ=60)
TCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTAC > SRR4302533.2691125/1‑94 (MQ=60)
CTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACG > SRR4302533.137303/1‑94 (MQ=60)
TGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGC > SRR4302533.4171494/1‑94 (MQ=60)
TGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGC > SRR4302533.5877116/1‑94 (MQ=60)
TGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGC > SRR4302533.2103634/1‑94 (MQ=60)
TAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATT < SRR4302533.1049622/94‑1 (MQ=60)
GTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTT > SRR4302533.1944894/1‑94 (MQ=60)
CGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAG > SRR4302533.1463359/1‑94 (MQ=60)
cgctcCCGCCCCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGT < SRR4302533.4782241/89‑1 (MQ=60)
GGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTACGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGT > SRR4302533.944068/1‑94 (MQ=60)
GGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGT < SRR4302533.6199006/94‑1 (MQ=60)
GGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGT > SRR4302533.4828297/1‑94 (MQ=60)
GGCTACCGCCGCTTTCACCGCCAATTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGT > SRR4302533.2052507/1‑94 (MQ=60)
GCTGCCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTG < SRR4302533.5234360/94‑1 (MQ=60)
GCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTG < SRR4302533.5969037/94‑1 (MQ=60)
GCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTG > SRR4302533.4237833/1‑94 (MQ=60)
GCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTG > SRR4302533.4124760/1‑94 (MQ=60)
GCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTG < SRR4302533.204143/94‑1 (MQ=60)
CTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGC > SRR4302533.2350007/1‑94 (MQ=60)
TACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCC > SRR4302533.1827173/1‑94 (MQ=60)
TACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCC > SRR4302533.5677015/1‑94 (MQ=60)
TACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCC > SRR4302533.3908712/1‑94 (MQ=60)
ACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCG > SRR4302533.2935326/1‑94 (MQ=60)
GCCGCTTTCACCGCTAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTC > SRR4302533.3857126/1‑94 (MQ=60)
CACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGT > SRR4302533.2464293/1‑94 (MQ=60)
CCCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTG < SRR4302533.816792/94‑1 (MQ=60)
CCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGC < SRR4302533.2595343/94‑1 (MQ=60)
GCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGC > SRR4302533.5568125/1‑94 (MQ=60)
GCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGC < SRR4302533.4584503/94‑1 (MQ=60)
GCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGC > SRR4302533.2254171/1‑94 (MQ=60)
CCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCC > SRR4302533.3125580/1‑94 (MQ=60)
AGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAA > SRR4302533.2150897/1‑94 (MQ=60)
GTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAAT > SRR4302533.4050429/1‑94 (MQ=60)
GTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAAT < SRR4302533.529143/94‑1 (MQ=60)
TCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAG > SRR4302533.802376/1‑94 (MQ=60)
TCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAG > SRR4302533.5340794/1‑94 (MQ=60)
CCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGC < SRR4302533.5562452/94‑1 (MQ=60)
CAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCC < SRR4302533.1006686/94‑1 (MQ=60)
CAGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCC < SRR4302533.1212802/94‑1 (MQ=60)
AGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCG > SRR4302533.2566812/1‑94 (MQ=60)
AGATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCG < SRR4302533.3456235/94‑1 (MQ=60)
AGATCGGCACCGTTAAGCACAATAAACGGATCCGAATCGCCAAGTTCCAGTACGCTTTTTTTCAGTGCGGCTCCAGCCTGTGCGCCAATAGGCG < SRR4302533.3977349/94‑1 (MQ=60)
GATCGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGC > SRR4302533.1705973/1‑94 (MQ=60)
CGGCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCC > SRR4302533.3494133/1‑94 (MQ=60)
GCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCG > SRR4302533.272874/1‑94 (MQ=60)
GCATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCG > SRR4302533.6261171/1‑94 (MQ=60)
CATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGC > SRR4302533.5288334/1‑94 (MQ=60)
ATCGTTAAGCACAATAAACGGATCCGAATTGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCA > SRR4302533.1314160/1‑94 (MQ=60)
ATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCA > SRR4302533.1494409/1‑94 (MQ=60)
ATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCA > SRR4302533.531481/1‑94 (MQ=60)
ATCGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCA > SRR4302533.3178792/1‑94 (MQ=60)
TCGTGAAGCACAATAAACGGAACCGAAACGCCCAGGTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCAC > SRR4302533.6344172/1‑94 (MQ=60)
CGTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACG > SRR4302533.3222353/1‑94 (MQ=60)
GTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGA > SRR4302533.3498564/1‑94 (MQ=60)
GTTAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGA > SRR4302533.3357097/1‑94 (MQ=60)
TAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAAC < SRR4302533.2258284/94‑1 (MQ=60)
TAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAAC < SRR4302533.5323040/94‑1 (MQ=60)
TAAGCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAAC > SRR4302533.1831434/1‑94 (MQ=60)
GCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACT < SRR4302533.2586408/94‑1 (MQ=60)
GCACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGACGCTCCCGCACGAACACT > SRR4302533.2252387/1‑94 (MQ=60)
CACAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTT < SRR4302533.3388809/94‑1 (MQ=60)
CAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCC < SRR4302533.4932485/94‑1 (MQ=60)
CAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCC < SRR4302533.1113110/94‑1 (MQ=60)
CAATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCC < SRR4302533.110146/94‑1 (MQ=60)
AATAAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCG < SRR4302533.3661955/94‑1 (MQ=60)
AAACGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTC > SRR4302533.4692136/1‑94 (MQ=60)
CGGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACC < SRR4302533.6088551/94‑1 (MQ=60)
GGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCG > SRR4302533.3304843/1‑94 (MQ=60)
GGATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCG > SRR4302533.5305375/1‑94 (MQ=60)
GATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGT > SRR4302533.3567677/1‑94 (MQ=60)
GATCCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGT < SRR4302533.5111883/94‑1 (MQ=60)
CCGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGAC > SRR4302533.2468398/1‑94 (MQ=60)
CCCAAACGCCCAGTTCCAGTACGCATTATTTCAGTGCCGCCCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGAC < SRR4302533.5155764/94‑1 (MQ=60)
CGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACA > SRR4302533.1633675/1‑94 (MQ=60)
CGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACA < SRR4302533.3829751/94‑1 (MQ=60)
CGAATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACA < SRR4302533.1457138/94‑1 (MQ=60)
AATCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACAGC < SRR4302533.713482/94‑1 (MQ=60)
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CATACCTGTCCGGTATTCTGATAACGTCCGGCTACCGCCGCTTTCACCGCCAGTTCCAGATCGGCATCGTTAAGCACAATAAACGGATCCGAACCGCCCAGTTCCAGTACGCATTTTTTCAGTGCCGCTCCAGCCTGTGCGCCAATAGCCGCTCCCGCACGAACACTTCCGGTCACCGTGACAGC > NC_000913/1611925‑1612109
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
