Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,612,901 |
T→C |
V25A (GTG→GCG) |
yneJ → |
putative transcriptional regulator LYSR‑type |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,612,901 | 0 | T | C | 100.0%
| 639.3
/ NA
| 200 | V25A (GTG→GCG) | yneJ | putative transcriptional regulator LYSR‑type |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (107/93); total (107/93) |
Only 100 of 207 total aligned reads displayed.
CACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGTGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGTT > NC_000913/1612811‑1612990
|
cACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAgcgc > 1:4549159/1‑93 (MQ=255)
aCGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCa < 2:3088118/93‑1 (MQ=255)
aCGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCa < 1:3674554/93‑1 (MQ=255)
cGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCAt < 1:3040024/93‑1 (MQ=255)
gAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATc < 2:197633/93‑1 (MQ=255)
gAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATc < 1:2781082/93‑1 (MQ=255)
gAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATc > 2:4920610/1‑93 (MQ=255)
tCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATcgcg > 1:1007361/1‑93 (MQ=255)
cGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGt > 1:1860871/1‑93 (MQ=255)
gagaATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTg > 1:2194024/1‑93 (MQ=255)
gagaATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTg > 1:4059581/1‑93 (MQ=255)
agaATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGc > 1:5810119/1‑93 (MQ=255)
aaTGCTATGGATCTGACCCAACTGGAGATGTACAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCg > 2:5040390/1‑93 (MQ=255)
tGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTc < 2:4208612/93‑1 (MQ=255)
tGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTc > 2:4992483/1‑93 (MQ=255)
cTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGa > 1:5644990/1‑93 (MQ=255)
tATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGaa > 1:676225/1‑93 (MQ=255)
tATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGaa > 1:966443/1‑93 (MQ=255)
tATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGaa > 1:5459217/1‑93 (MQ=255)
aTGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAt > 1:2204153/1‑93 (MQ=255)
aTGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAt > 2:5724162/1‑93 (MQ=255)
tGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAtc > 2:2584326/1‑93 (MQ=255)
tGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAtc < 2:4250375/93‑1 (MQ=255)
tGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAtc > 1:4690705/1‑93 (MQ=255)
gATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAtctc < 2:3932092/93‑1 (MQ=255)
gATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAtctc > 1:5743800/1‑93 (MQ=255)
cTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACt < 2:3027860/93‑1 (MQ=255)
gACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAc > 1:5026268/1‑93 (MQ=255)
gACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAc > 2:2116133/1‑93 (MQ=255)
gACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAc > 1:4314732/1‑93 (MQ=255)
aCCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAcc > 2:2643540/1‑93 (MQ=255)
aCCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAcc < 1:5629824/93‑1 (MQ=255)
ccAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCg > 2:4541002/1‑93 (MQ=255)
cAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGt < 1:5519410/93‑1 (MQ=255)
cAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGt > 1:132213/1‑93 (MQ=255)
cAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGt > 2:6204256/1‑93 (MQ=255)
aaCTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTc < 1:5569238/93‑1 (MQ=255)
aaCTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTc < 1:5084692/93‑1 (MQ=255)
aCTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCt > 2:1273787/1‑93 (MQ=255)
cTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTg < 2:2950568/93‑1 (MQ=255)
gagaTGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTgcgc > 2:2853074/1‑93 (MQ=255)
gaTGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCa > 1:188196/1‑93 (MQ=255)
gaTGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCa > 2:2278227/1‑93 (MQ=255)
gTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCt < 1:4407569/93‑1 (MQ=255)
tCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTgg > 1:5652808/1‑93 (MQ=255)
cAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGa < 2:6000954/93‑1 (MQ=255)
aaCGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGaa > 1:2660/1‑93 (MQ=255)
aCGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGaaa > 1:4207886/1‑93 (MQ=255)
ggTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGa < 2:3632969/93‑1 (MQ=255)
ggTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGa < 2:1326955/93‑1 (MQ=255)
ggTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGa > 2:1938570/1‑93 (MQ=255)
gTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGaa > 2:4716626/1‑93 (MQ=255)
gTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGaa > 2:710360/1‑93 (MQ=255)
gTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGaa < 1:2301249/93‑1 (MQ=255)
ttGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAAc < 2:4328912/93‑1 (MQ=255)
ttGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAAc < 2:1005130/93‑1 (MQ=255)
ttGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAAc < 1:491151/93‑1 (MQ=255)
tGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACt > 2:5838630/1‑93 (MQ=255)
gCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTg > 2:1876232/1‑93 (MQ=255)
ccGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTgg > 2:2981680/1‑93 (MQ=255)
cGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCACCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTggg < 1:2484752/93‑1 (MQ=255)
gAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTgggg > 2:1688443/1‑93 (MQ=255)
gAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTgggg > 1:1758978/1‑93 (MQ=255)
aaGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTggggg < 1:194839/93‑1 (MQ=255)
aaGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTggggg > 2:2681175/1‑93 (MQ=255)
tGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGa > 1:2569023/1‑93 (MQ=255)
ggCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGAt < 2:1120119/93‑1 (MQ=255)
gcagcaTAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATc < 2:3812339/93‑1 (MQ=255)
cagcaTAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCt < 1:6254476/93‑1 (MQ=255)
cagcaTAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGGTGATCt > 1:3547749/1‑93 (MQ=255)
gcaTAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGt < 2:5209090/93‑1 (MQ=255)
aTAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGttt < 1:2638618/93‑1 (MQ=255)
aTAACCCAGGCTGCAGCAAAAGCGCATCGCGGGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGTTTGATCTGtta < 2:496291/93‑2 (MQ=255)
tAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTa < 1:4283173/93‑1 (MQ=255)
tAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTa < 1:5379442/93‑1 (MQ=255)
aCCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTAtt > 1:1553260/1‑93 (MQ=255)
aCCCAGGCTGCAGCAAAAGCGCATAGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTAtt < 1:6307657/93‑1 (MQ=255)
cccAGGCTGCAGCAAAAGCGCATCGTGTGCCGTCGAATCTCACTACCCGTCTGCCCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTc < 1:4623897/93‑1 (MQ=255)
cccAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTc < 2:5523994/93‑1 (MQ=255)
cccAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTc < 1:3154671/93‑1 (MQ=255)
ccAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTcg < 2:3859653/93‑1 (MQ=255)
ccAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTcg > 1:2928399/1‑93 (MQ=255)
cAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTcgc < 1:6129656/93‑1 (MQ=255)
aGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTcgcg > 2:773181/1‑93 (MQ=255)
ggCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCga < 2:223993/93‑1 (MQ=255)
ggCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCga < 2:4840981/93‑1 (MQ=255)
ggCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCga > 1:3869774/1‑93 (MQ=255)
ggCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCga > 2:2447631/1‑93 (MQ=255)
cTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCgaga > 1:3798196/1‑93 (MQ=255)
cTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCgaga > 1:5204195/1‑93 (MQ=255)
cagcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATc < 2:4429269/93‑1 (MQ=255)
cagcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATc < 2:5854880/93‑1 (MQ=255)
cagcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATc < 2:5386561/93‑1 (MQ=255)
cagcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATc < 2:5652808/93‑1 (MQ=255)
gcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAg > 2:1100950/1‑93 (MQ=255)
gcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAg > 2:3819602/1‑93 (MQ=255)
gcaAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAg > 2:3352425/1‑93 (MQ=255)
caAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGc < 2:2343363/93‑1 (MQ=255)
aaaaGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCg > 2:510381/1‑93 (MQ=255)
aaaGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGt < 1:1103615/93‑1 (MQ=255)
|
CACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGTGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGTT > NC_000913/1612811‑1612990
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTCACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGTGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGTTTACG > NC_000913/1612808‑1612994
|
ATTCACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGC > SRR4302533.1728762/1‑94 (MQ=60)
TTCACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCG > SRR4302533.3303635/1‑94 (MQ=60)
TCACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGC > SRR4302533.4576744/1‑94 (MQ=60)
CACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCA > SRR4302533.2824784/1‑94 (MQ=60)
ACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCAT < SRR4302533.3697139/94‑1 (MQ=60)
CGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATC < SRR4302533.3058630/94‑1 (MQ=60)
GAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCG < SRR4302533.2798166/94‑1 (MQ=60)
GAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCG > SRR4302533.3806779/1‑94 (MQ=60)
ATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCG > SRR4302533.1013254/1‑94 (MQ=60)
ATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCG > SRR4302533.4323983/1‑94 (MQ=60)
TCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGT > SRR4302533.1872218/1‑94 (MQ=60)
CGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTG > SRR4302533.4084291/1‑94 (MQ=60)
CGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTG > SRR4302533.2207547/1‑94 (MQ=60)
GAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGC > SRR4302533.5845206/1‑94 (MQ=60)
AGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCC > SRR4302533.4650316/1‑94 (MQ=60)
AGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCC > SRR4302533.5823261/1‑94 (MQ=60)
GAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCG > SRR4302533.1885240/1‑94 (MQ=60)
GAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCG < SRR4302533.6234635/94‑1 (MQ=60)
TGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCG < SRR4302533.5060612/94‑1 (MQ=60)
GCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGA > SRR4302533.5679116/1‑94 (MQ=60)
CTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAA > SRR4302533.4433897/1‑94 (MQ=60)
CTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAA > SRR4302533.5492107/1‑94 (MQ=60)
CTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAA > SRR4302533.680221/1‑94 (MQ=60)
CTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAA > SRR4302533.972113/1‑94 (MQ=60)
TATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAAT > SRR4302533.2217738/1‑94 (MQ=60)
ATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATC > SRR4302533.4719138/1‑94 (MQ=60)
GGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTC > SRR4302533.5778460/1‑94 (MQ=60)
GATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGACTCTCA > SRR4302533.1922401/1‑94 (MQ=60)
TGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAC > SRR4302533.4340709/1‑94 (MQ=60)
TGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTAC > SRR4302533.5056702/1‑94 (MQ=60)
ACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCC < SRR4302533.5663869/94‑1 (MQ=60)
CCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGT > SRR4302533.133044/1‑94 (MQ=60)
CAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTC > SRR4302533.4149395/1‑94 (MQ=60)
CAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTC < SRR4302533.5552735/94‑1 (MQ=60)
AACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCT < SRR4302533.5602902/94‑1 (MQ=60)
AACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCT < SRR4302533.2009250/94‑1 (MQ=60)
AACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCT < SRR4302533.5115420/94‑1 (MQ=60)
GGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGC < SRR4302533.1579402/94‑1 (MQ=60)
AGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCA > SRR4302533.189366/1‑94 (MQ=60)
GATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAG > SRR4302533.1086346/1‑94 (MQ=60)
ATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGC > SRR4302533.1208481/1‑94 (MQ=60)
GTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTG < SRR4302533.4434184/94‑1 (MQ=60)
TTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGGGCCAGCTGG > SRR4302533.1863594/1‑94 (MQ=60)
TTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGG > SRR4302533.5686974/1‑94 (MQ=60)
TTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGG < SRR4302533.2543315/94‑1 (MQ=60)
TCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGA < SRR4302533.5683807/94‑1 (MQ=60)
CAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAA > SRR4302533.2681/1‑94 (MQ=60)
CAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAA > SRR4302533.386461/1‑94 (MQ=60)
CAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAA < SRR4302533.4239400/94‑1 (MQ=60)
AACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAA < SRR4302533.2212873/94‑1 (MQ=60)
AACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAA > SRR4302533.4233345/1‑94 (MQ=60)
CGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGA > SRR4302533.3693545/1‑94 (MQ=60)
GGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAA > SRR4302533.591276/1‑94 (MQ=60)
GTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAAC < SRR4302533.2315512/94‑1 (MQ=60)
TTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACT < SRR4302533.494085/94‑1 (MQ=60)
GCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGG < SRR4302533.495082/94‑1 (MQ=60)
CCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGG < SRR4302533.5560358/94‑1 (MQ=60)
CGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGG > SRR4302533.2220242/1‑94 (MQ=60)
CGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGG < SRR4302533.5315602/94‑1 (MQ=60)
CGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGG > SRR4302533.1769700/1‑94 (MQ=60)
CGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCACCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGG < SRR4302533.2500063/94‑1 (MQ=60)
GAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGCAACAGAACTGGGGG > SRR4302533.3161817/1‑94 (MQ=60)
GAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGG < SRR4302533.547965/94‑1 (MQ=60)
GAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGG > SRR4302533.4651256/1‑94 (MQ=60)
AAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGT < SRR4302533.196067/94‑1 (MQ=60)
CTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGA < SRR4302533.262707/94‑1 (MQ=60)
CTGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGA > SRR4302533.2584831/1‑94 (MQ=60)
TGGCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGAT > SRR4302533.4663694/1‑94 (MQ=60)
GCAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGGTGATCT > SRR4302533.3569614/1‑94 (MQ=60)
CAGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTG < SRR4302533.6291883/94‑1 (MQ=60)
AGCATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGT > SRR4302533.3419722/1‑94 (MQ=60)
ATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTA < SRR4302533.6313277/94‑1 (MQ=60)
ATAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTA < SRR4302533.2654836/94‑1 (MQ=60)
TAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTAT < SRR4302533.4308914/94‑1 (MQ=60)
TAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTAT < SRR4302533.675617/94‑1 (MQ=60)
TAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTAT < SRR4302533.5495488/94‑1 (MQ=60)
TAACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTAT < SRR4302533.5411764/94‑1 (MQ=60)
AACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATT > SRR4302533.2758949/1‑94 (MQ=60)
AACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATT > SRR4302533.1562614/1‑94 (MQ=60)
ACCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTC > SRR4302533.100385/1‑94 (MQ=60)
ACCCAGGCTGCAGCAAAAGCGCATAGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTC < SRR4302533.6345481/94‑1 (MQ=60)
CCCAGGCTGCAGCAAAAGCGCATCGTGTGCCGTCGAATCTCACTACCCGTCTGCCCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCG < SRR4302533.4651924/94‑1 (MQ=60)
CCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCG > SRR4302533.2946313/1‑94 (MQ=60)
CCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCG > SRR4302533.2946312/1‑94 (MQ=60)
CCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCG < SRR4302533.3174064/94‑1 (MQ=60)
CCCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCG > SRR4302533.1552765/1‑94 (MQ=60)
CCAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGC > SRR4302533.5651067/1‑94 (MQ=60)
CAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCG > SRR4302533.277095/1‑94 (MQ=60)
CAGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCG < SRR4302533.6166592/94‑1 (MQ=60)
AGGCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGA > SRR4302533.3893398/1‑94 (MQ=60)
GCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGA > SRR4302533.3821446/1‑94 (MQ=60)
GCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGA > SRR4302533.5235553/1‑94 (MQ=60)
GCTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGA > SRR4302533.4859828/1‑94 (MQ=60)
CTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAA < SRR4302533.572834/94‑1 (MQ=60)
CTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAA > SRR4302533.2456759/1‑94 (MQ=60)
CTGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAA < SRR4302533.5152651/94‑1 (MQ=60)
TGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTCCCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAAT < SRR4302533.5677060/94‑1 (MQ=60)
TGCAGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAAT < SRR4302533.964654/94‑1 (MQ=60)
AGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAG < SRR4302533.2673216/94‑1 (MQ=60)
AGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAG > SRR4302533.3906660/1‑94 (MQ=60)
AGCAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAG < SRR4302533.4440183/94‑1 (MQ=60)
CAAAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCG < SRR4302533.5830431/94‑1 (MQ=60)
AAAGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGTT < SRR4302533.1110149/94‑1 (MQ=60)
AGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAGACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGTTTA < SRR4302533.3441664/94‑1 (MQ=60)
AGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGTTTA > SRR4302533.3029062/1‑94 (MQ=60)
AGCGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGTTTA > SRR4302533.827908/1‑94 (MQ=60)
CGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGTTTACG > SRR4302533.5617117/1‑94 (MQ=60)
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ATTCACGAATCGAGAATGCTATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGTGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGTTTACG > NC_000913/1612808‑1612994
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
