Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,616,587 |
T→C |
S116G (AGT→GGT) |
ydeB ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,616,587 | 0 | T | C | 100.0%
| 605.5
/ NA
| 189 | S116G (AGT→GGT) | ydeB | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (95/94); total (95/94) |
Only 100 of 192 total aligned reads displayed.
GCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAA > NC_000913/1616497‑1616676
|
gCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCgg > 1:1102936/1‑93 (MQ=255)
gCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCgg > 2:4047507/1‑93 (MQ=255)
aCTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGt > 1:4516501/1‑93 (MQ=255)
aCTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGt < 1:2283520/93‑1 (MQ=255)
aCTGTGGACGCCGAGATAATAATCATCGATATGGTTCACGGACCGCCAGTGCTGGGCATTGCTAGCGGCACAAAGCCAATCTTGGCACCGGGt < 2:5037389/93‑1 (MQ=255)
tgGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCAt > 1:4287342/1‑93 (MQ=255)
tgGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCAt > 2:6292418/1‑93 (MQ=255)
ggACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATc < 2:5914325/93‑1 (MQ=255)
gACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCt > 1:473876/1‑93 (MQ=255)
aCGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCtt < 1:6143054/93‑1 (MQ=255)
cGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTc < 2:4614482/93‑1 (MQ=255)
gCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTcc > 1:252282/1‑93 (MQ=255)
gCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTcc < 1:656034/93‑1 (MQ=255)
gCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTcc < 1:72839/93‑1 (MQ=255)
cccGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCTGCACAAAGGCAATATTGGCACCGGGTTCATCTTcc < 2:5603305/92‑1 (MQ=255)
gAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGc > 2:4237824/1‑93 (MQ=255)
gAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGc > 1:106994/1‑93 (MQ=255)
aGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGct < 1:880688/93‑1 (MQ=255)
gCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctc > 2:5339055/1‑93 (MQ=255)
gCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGctc > 1:1981276/1‑93 (MQ=255)
aataatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTc < 1:4575372/93‑1 (MQ=255)
aataatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTc < 2:5886036/93‑1 (MQ=255)
taatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCg < 1:2399935/93‑1 (MQ=255)
aatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGa < 2:1637389/93‑1 (MQ=255)
aatCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGa > 2:2165961/1‑93 (MQ=255)
atcatcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGAc < 2:3721132/93‑1 (MQ=255)
catcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACtt > 1:2349744/1‑93 (MQ=255)
atcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTg > 2:3504867/1‑93 (MQ=255)
tcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGc < 2:1060116/93‑1 (MQ=255)
tcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGc < 2:5180975/93‑1 (MQ=255)
tcGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAACGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGc > 1:6014240/1‑93 (MQ=255)
cTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCttt < 2:2764693/93‑1 (MQ=255)
tATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCtttt > 2:2349269/1‑93 (MQ=255)
aTGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTc < 2:2541710/93‑1 (MQ=255)
tGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCg > 1:4384583/1‑93 (MQ=255)
tGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGATCATCTTCCAGCTCTTCCGACTTGCTTTTct > 1:5818237/1‑92 (MQ=255)
ggTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGCCTTGCTTTTCGc > 1:4756548/1‑93 (MQ=255)
gTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGcc > 1:2649687/1‑93 (MQ=255)
tCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTc > 1:6274592/1‑93 (MQ=255)
cccGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTcc < 1:4694526/93‑1 (MQ=255)
cccGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTcc < 1:2887187/93‑1 (MQ=255)
cccGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTcc < 2:5972124/93‑1 (MQ=255)
cGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCgg > 2:2915604/1‑93 (MQ=255)
ggACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGt > 2:3154403/1‑93 (MQ=255)
gACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTg > 2:3162417/1‑93 (MQ=255)
ccGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaa < 1:4481144/93‑1 (MQ=255)
cGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaat < 2:5357784/93‑1 (MQ=255)
cGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaat > 1:3450942/1‑93 (MQ=255)
cGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaat > 1:317871/1‑93 (MQ=255)
cGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaat > 1:1013642/1‑93 (MQ=255)
gCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatca > 1:2809986/1‑93 (MQ=255)
gCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatca > 1:4183276/1‑93 (MQ=255)
cAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaa > 2:3527486/1‑93 (MQ=255)
aGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaat > 2:3265443/1‑93 (MQ=255)
aGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaat > 2:1785454/1‑93 (MQ=255)
gtgcTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaatc < 2:3216414/90‑1 (MQ=255)
gtgcTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGaatcaatc < 1:1658627/90‑1 (MQ=255)
tgcTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCg < 2:4424288/91‑1 (MQ=255)
tgcTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCg > 2:2032227/3‑93 (MQ=255)
cTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCt < 2:855364/93‑1 (MQ=255)
ttGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCtt < 2:774904/93‑1 (MQ=255)
tGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCttt > 1:4621919/1‑93 (MQ=255)
tGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCttt < 2:460434/93‑1 (MQ=255)
tGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCttt < 1:4214534/93‑1 (MQ=255)
ggCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTc < 2:3892111/93‑1 (MQ=255)
gCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATGTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCt > 1:3375240/1‑93 (MQ=255)
cATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTg < 1:2695455/93‑1 (MQ=255)
cATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTg > 2:4112857/1‑93 (MQ=255)
aTTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGt < 2:1490233/93‑1 (MQ=255)
aTTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGt > 1:2841185/1‑93 (MQ=255)
ttGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGtt > 1:5079580/1‑93 (MQ=255)
ttGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGtt < 2:6044920/93‑1 (MQ=255)
gCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGc > 1:3662836/1‑93 (MQ=255)
gCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGc < 1:533739/93‑1 (MQ=255)
gCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGc < 1:3618414/93‑1 (MQ=255)
gCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGc < 2:5390550/93‑1 (MQ=255)
gCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGc < 1:2206705/93‑1 (MQ=255)
ccAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCTGGTGAATCAATCGCTTTCTGTTGCg < 1:2071573/93‑1 (MQ=255)
ccAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCg > 1:1042442/1‑93 (MQ=255)
gCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGaa < 2:4202336/93‑1 (MQ=255)
gCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGaa > 2:4762281/1‑93 (MQ=255)
cGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGaaa < 2:2106908/93‑1 (MQ=255)
cGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGaaa < 1:5567578/93‑1 (MQ=255)
acaAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGc < 1:4836130/93‑1 (MQ=255)
acaAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGc > 2:983173/1‑93 (MQ=255)
acaAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGc < 1:3054543/93‑1 (MQ=255)
caAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCa < 2:1197026/93‑1 (MQ=255)
caAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCa < 2:273392/93‑1 (MQ=255)
caAAGGCAATATTGGCACCGGGTTCATCGTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCa < 1:1244975/93‑1 (MQ=255)
aaGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATc > 1:1723332/1‑93 (MQ=255)
aGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATcc < 1:4031788/93‑1 (MQ=255)
aGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATcc > 2:833856/1‑93 (MQ=255)
ggCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCg < 2:3333746/93‑1 (MQ=255)
ggCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCg < 1:2178456/93‑1 (MQ=255)
cAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGaa < 1:1452987/93‑1 (MQ=255)
tGGCAGCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGa < 2:4442992/93‑1 (MQ=255)
tGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGa < 2:6014240/93‑1 (MQ=255)
ggCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGAt > 2:1091456/1‑93 (MQ=255)
ggCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGAt < 1:4959214/93‑1 (MQ=255)
cACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATaa < 1:3826944/93‑1 (MQ=255)
|
GCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAA > NC_000913/1616497‑1616676
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGC > NC_000913/1616494‑1616680
|
GACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACC < SRR4302533.2190970/94‑1 (MQ=60)
GACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACC > SRR4302533.4953363/1‑94 (MQ=60)
ACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCACTATTGGCACCG > SRR4302533.3397220/1‑94 (MQ=60)
ACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCG < SRR4302533.3738189/94‑1 (MQ=60)
ACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCG > SRR4302533.3334196/1‑94 (MQ=60)
CGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGG > SRR4302533.5558284/1‑94 (MQ=60)
CGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGG > SRR4302533.1109466/1‑94 (MQ=60)
GCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGG < SRR4302533.2073282/94‑1 (MQ=60)
GCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGG > SRR4302533.3116641/1‑94 (MQ=60)
CACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGT > SRR4302533.4543851/1‑94 (MQ=60)
ACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTT > SRR4302533.4568430/1‑94 (MQ=60)
ACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTT < SRR4302533.2297654/94‑1 (MQ=60)
ACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGGT > SRR4302533.131775/1‑94 (MQ=60)
GTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCAT > SRR4302533.4313123/1‑94 (MQ=60)
GGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCT > SRR4302533.476706/1‑94 (MQ=60)
GGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCT < SRR4302533.2403901/94‑1 (MQ=60)
GACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTT < SRR4302533.2888698/94‑1 (MQ=60)
GACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTT > SRR4302533.4782026/1‑94 (MQ=60)
ACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTC < SRR4302533.6180045/94‑1 (MQ=60)
CGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCC > SRR4302533.253835/1‑94 (MQ=60)
GCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCA > SRR4302533.4625854/1‑94 (MQ=60)
GCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCA > SRR4302533.2639432/1‑94 (MQ=60)
GCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCA < SRR4302533.6337791/94‑1 (MQ=60)
GCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCA < SRR4302533.659904/94‑1 (MQ=60)
GCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCA < SRR4302533.466432/94‑1 (MQ=60)
GCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCA < SRR4302533.73307/94‑1 (MQ=60)
CCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAG > SRR4302533.2707295/1‑94 (MQ=60)
CGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGC > SRR4302533.2768034/1‑94 (MQ=60)
CGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGC > SRR4302533.107663/1‑94 (MQ=60)
AGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTC > SRR4302533.1993404/1‑94 (MQ=60)
AGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTC < SRR4302533.885859/94‑1 (MQ=60)
AGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTC > SRR4302533.4532037/1‑94 (MQ=60)
GCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCT < SRR4302533.4931946/94‑1 (MQ=60)
TAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCTGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTC > SRR4302533.5838857/1‑94 (MQ=60)
TAATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTC > SRR4302533.5158405/1‑94 (MQ=60)
AATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCC < SRR4302533.3806109/94‑1 (MQ=60)
AATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCC > SRR4302533.3302202/1‑94 (MQ=60)
AATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCC < SRR4302533.1477497/94‑1 (MQ=60)
AATAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCC < SRR4302533.4603099/94‑1 (MQ=60)
TAATCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGA < SRR4302533.2414755/94‑1 (MQ=60)
TCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTT > SRR4302533.6094080/1‑94 (MQ=60)
TCATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTT > SRR4302533.2364279/1‑94 (MQ=60)
ATCGCTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAACGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGC > SRR4302533.6050686/1‑94 (MQ=60)
CTATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTT > SRR4302533.2448968/1‑94 (MQ=60)
ATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCG > SRR4302533.4411054/1‑94 (MQ=60)
ATGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGATCATCTTCCAGCTCTTCCGACTTGCTTTTCT > SRR4302533.5853384/1‑94 (MQ=60)
TGGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGCCTTGCTTTTCGC > SRR4302533.4785411/1‑94 (MQ=60)
GGTTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCC > SRR4302533.2665963/1‑94 (MQ=60)
TTCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTC > SRR4302533.6312066/1‑94 (MQ=60)
TCCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCC > SRR4302533.4414606/1‑94 (MQ=60)
CCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCG < SRR4302533.2904938/94‑1 (MQ=60)
CCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCG < SRR4302533.1953754/94‑1 (MQ=60)
CCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCG < SRR4302533.4722973/94‑1 (MQ=60)
CCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCG > SRR4302533.1144009/1‑94 (MQ=60)
CCCGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCG < SRR4302533.1055512/94‑1 (MQ=60)
CGGACCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGT > SRR4302533.2848219/1‑94 (MQ=60)
CCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAAT > SRR4302533.1019578/1‑94 (MQ=60)
CCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAAT < SRR4302533.4508254/94‑1 (MQ=60)
CCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAAT > SRR4302533.3472250/1‑94 (MQ=60)
CCGGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAAT > SRR4302533.319821/1‑94 (MQ=60)
GGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCA > SRR4302533.4208607/1‑94 (MQ=60)
GGCAGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCA > SRR4302533.2827277/1‑94 (MQ=60)
AGTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATC < SRR4302533.4806934/94‑1 (MQ=60)
GTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCG < SRR4302533.1668660/94‑1 (MQ=60)
GTGCTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCG > SRR4302533.3588434/1‑94 (MQ=60)
TTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTT > SRR4302533.4649931/1‑94 (MQ=60)
TTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTT < SRR4302533.4101001/94‑1 (MQ=60)
TGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTC < SRR4302533.4240031/94‑1 (MQ=60)
TGGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTC < SRR4302533.2208758/94‑1 (MQ=60)
GGCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATGTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCT > SRR4302533.3396086/1‑94 (MQ=60)
GGCATCGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCT < SRR4302533.2490190/94‑1 (MQ=60)
GCATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTG < SRR4302533.723947/94‑1 (MQ=60)
CATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGT > SRR4302533.2858670/1‑94 (MQ=60)
CATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGT < SRR4302533.2711973/94‑1 (MQ=60)
CATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGT > SRR4302533.2188335/1‑94 (MQ=60)
ATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTT > SRR4302533.1728842/1‑94 (MQ=60)
ATTGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTT > SRR4302533.5110283/1‑94 (MQ=60)
TGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGG > SRR4302533.5917155/1‑94 (MQ=60)
TGCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGC > SRR4302533.3685352/1‑94 (MQ=60)
GCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCG < SRR4302533.536914/94‑1 (MQ=60)
GCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCG > SRR4302533.1048570/1‑94 (MQ=60)
GCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCG < SRR4302533.2220313/94‑1 (MQ=60)
GCCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCG < SRR4302533.3640671/94‑1 (MQ=60)
CCAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCTGGTGAATCAATCGCTTTCTGTTGCGG < SRR4302533.2084333/94‑1 (MQ=60)
CAGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGA > SRR4302533.6282195/1‑94 (MQ=60)
AGCGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAA > SRR4302533.2229301/1‑94 (MQ=60)
CGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAG < SRR4302533.4245606/94‑1 (MQ=60)
CGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAG > SRR4302533.2918511/1‑94 (MQ=60)
CGGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAG < SRR4302533.5601231/94‑1 (MQ=60)
GGCACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGA < SRR4302533.4380774/94‑1 (MQ=60)
ACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCA > SRR4302533.925479/1‑94 (MQ=60)
ACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCA < SRR4302533.3073262/94‑1 (MQ=60)
ACAAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCA < SRR4302533.4865443/94‑1 (MQ=60)
CAAAGGCAATATTGGCACCGGGTTCATCGTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCAT < SRR4302533.1252408/94‑1 (MQ=60)
AAAGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATC > SRR4302533.1733786/1‑94 (MQ=60)
AGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCG < SRR4302533.3939294/94‑1 (MQ=60)
AGGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCG < SRR4302533.4056332/94‑1 (MQ=60)
GGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGA < SRR4302533.2191884/94‑1 (MQ=60)
GGCAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGA > SRR4302533.5051191/1‑94 (MQ=60)
CAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAA < SRR4302533.1461752/94‑1 (MQ=60)
CAATATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAA > SRR4302533.3416366/1‑94 (MQ=60)
TATTGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACC > SRR4302533.1104785/1‑94 (MQ=60)
TGGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGAT < SRR4302533.4226809/94‑1 (MQ=60)
GGCACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATA < SRR4302533.4989258/94‑1 (MQ=60)
CACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAA > SRR4302533.2223755/1‑94 (MQ=60)
CACCGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAA < SRR4302533.3850339/94‑1 (MQ=60)
CGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGC > SRR4302533.2713515/1‑94 (MQ=60)
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GACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGATAAACGC > NC_000913/1616494‑1616680
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
