Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,617,966 |
T→C |
N125N (AAT→AAC) |
marA → |
MarA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,617,966 | 0 | T | C | 100.0%
| 790.1
/ NA
| 239 | N125N (AAT→AAC) | marA | MarA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (119/120); total (119/120) |
Only 100 of 244 total aligned reads displayed.
CCGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAATCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCTCT > NC_000913/1617876‑1618055
|
ccGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCa < 2:4349023/93‑1 (MQ=255)
ccGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCa > 1:1262200/1‑93 (MQ=255)
ccGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCa > 2:346185/1‑93 (MQ=255)
cGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCAt > 2:3248125/1‑93 (MQ=255)
cGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCAt > 1:3534704/1‑93 (MQ=255)
aaCCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTa > 1:5355221/1‑93 (MQ=255)
aCCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTac < 2:5340240/93‑1 (MQ=255)
aCCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTac < 2:6024193/93‑1 (MQ=255)
cTTGAAAAATGACTTTGATGTTCCTCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTacaa < 2:2617829/93‑1 (MQ=255)
ttCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTacaac < 2:3004082/93‑1 (MQ=255)
ttCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTacaac > 1:672834/1‑93 (MQ=255)
ttCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAACATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTacaac < 1:1407300/93‑1 (MQ=255)
tCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTacaaca > 1:1090883/1‑93 (MQ=255)
cAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAg < 1:2829342/93‑1 (MQ=255)
aaaaaTTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGc > 2:2688806/1‑93 (MQ=255)
aaaaaTTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGc > 1:4301553/1‑93 (MQ=255)
aaaaaTTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGAGAGAATCGCGATTTTTACATCCATTAAACCATTACAACAGc > 1:2154752/1‑93 (MQ=255)
aTTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGt > 2:4978886/1‑93 (MQ=255)
tttGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGaaa > 1:554256/1‑93 (MQ=255)
ttGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGaaaa > 2:1898423/1‑93 (MQ=255)
ttGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGaaaa > 1:3194534/1‑93 (MQ=255)
ttGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGaaaa < 1:3420454/93‑1 (MQ=255)
ttGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGaaaa > 1:1746236/1‑93 (MQ=255)
aTGTTCCGCCGCATAAATACCGGATGACCACTATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACgg > 2:390050/1‑92 (MQ=255)
aTGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGt < 2:4478689/93‑1 (MQ=255)
tGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTg > 2:2962189/1‑93 (MQ=255)
tGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTg < 1:1633841/93‑1 (MQ=255)
gTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGa > 1:2872280/1‑93 (MQ=255)
gTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGa > 1:2520544/1‑93 (MQ=255)
ccgccgCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACaa < 2:2759213/93‑1 (MQ=255)
cATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCAc < 1:3601553/93‑1 (MQ=255)
cATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCAc < 1:2392315/93‑1 (MQ=255)
aTAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACt > 2:5283955/1‑93 (MQ=255)
tAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTg > 2:4001513/1‑93 (MQ=255)
tAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTg > 2:1755308/1‑93 (MQ=255)
aaTACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAg < 2:4602909/93‑1 (MQ=255)
aTACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAgg < 1:81588/93‑1 (MQ=255)
tACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGc > 2:3961654/1‑93 (MQ=255)
tACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGc > 2:2581283/1‑93 (MQ=255)
tACCGGAGGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGc < 2:2884700/93‑1 (MQ=255)
ggATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATc < 1:5837422/93‑1 (MQ=255)
gATGACCACTATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCa > 2:6149172/1‑93 (MQ=255)
gATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCa < 2:578729/93‑1 (MQ=255)
gATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCa > 2:1220557/1‑93 (MQ=255)
aTGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCAt < 1:3925471/93‑1 (MQ=255)
tGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATg < 1:3097589/93‑1 (MQ=255)
gagcAATATGCAGAGCGAATCGCGCTCTTTACATCCATTAAACCCTTTCAACAGCTAGATGACAAAGTGACGATGTAACTGAGGCTATCATGa > 2:4801753/4‑93 (MQ=255)
gACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGa < 2:158088/93‑1 (MQ=255)
ccAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAGCGTGACAACGTCACTGAGGCAATCATGaaa < 1:1446458/93‑1 (MQ=255)
cAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAAc > 1:4812290/1‑93 (MQ=255)
cAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAAc < 1:5899486/93‑1 (MQ=255)
atatGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCa > 1:5446640/1‑93 (MQ=255)
tatGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCAc > 2:1675207/1‑93 (MQ=255)
tatGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCAc > 2:1462633/1‑93 (MQ=255)
tatGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCAc < 2:6279104/93‑1 (MQ=255)
tatGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCAc < 1:5066111/93‑1 (MQ=255)
tatGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCAGGAAACCAc < 2:6159788/93‑1 (MQ=255)
atGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACt < 1:1225591/93‑1 (MQ=255)
atGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACt > 1:1823574/1‑93 (MQ=255)
atGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACt < 1:4450998/93‑1 (MQ=255)
tGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACtt < 1:5244797/93‑1 (MQ=255)
gCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACttt > 2:3639658/1‑93 (MQ=255)
gCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACttt < 1:4783754/93‑1 (MQ=255)
gCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACttt < 1:3551433/93‑1 (MQ=255)
cAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTc < 2:5069033/93‑1 (MQ=255)
aGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCa < 1:5285370/93‑1 (MQ=255)
gggCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCAt < 1:4094021/93‑1 (MQ=255)
gggCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCAt < 2:5592852/93‑1 (MQ=255)
ggCGCATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCCCTTTCATc < 2:6062132/93‑1 (MQ=255)
gCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATcc < 2:1291783/93‑1 (MQ=255)
gCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATcc > 2:554410/1‑93 (MQ=255)
gCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATcc < 2:4261026/93‑1 (MQ=255)
tCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAAt > 1:2225773/1‑93 (MQ=255)
tCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAAt > 1:2063135/1‑93 (MQ=255)
cgcgCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATa > 2:4185603/1‑93 (MQ=255)
cgcgCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATa < 1:941727/93‑1 (MQ=255)
cgcgCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATa < 2:2231317/93‑1 (MQ=255)
cgcTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATagc < 2:4135061/93‑1 (MQ=255)
cgcTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATagc < 1:5672761/93‑1 (MQ=255)
gcTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATagca < 1:1512277/93‑1 (MQ=255)
gcTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATagca > 1:4879392/1‑93 (MQ=255)
tttttACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATagcagc < 1:4978785/93‑1 (MQ=255)
tttttACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATagcagc > 1:5576376/1‑93 (MQ=255)
tttACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTg < 2:1092303/93‑1 (MQ=255)
tttACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTg > 2:3776519/1‑93 (MQ=255)
cATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCt > 2:4736775/1‑93 (MQ=255)
aTCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCtt > 1:173155/1‑93 (MQ=255)
aTCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCtt < 1:2612431/93‑1 (MQ=255)
tCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTa > 1:6028269/1‑93 (MQ=255)
tCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTa > 2:825653/1‑93 (MQ=255)
ccATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTAt > 2:908385/1‑93 (MQ=255)
aTTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATtc < 1:3834684/93‑1 (MQ=255)
aTTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATtc > 2:340137/1‑93 (MQ=255)
aTTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATtc > 2:216253/1‑93 (MQ=255)
aTTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATtc < 2:1024017/93‑1 (MQ=255)
ttAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATtct > 2:654351/1‑93 (MQ=255)
ttAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATtct > 1:6101431/1‑93 (MQ=255)
tAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATtctc < 1:3268044/93‑1 (MQ=255)
tAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATtctc < 1:3778990/93‑1 (MQ=255)
aaaCCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTctct < 1:449841/93‑1 (MQ=255)
|
CCGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAATCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCTCT > NC_000913/1617876‑1618055
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GACCCGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAATCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCTCTTTTC > NC_000913/1617873‑1618059
|
GACCCGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAAC < SRR4302533.345580/94‑1 (MQ=60)
CCCGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCA > SRR4302533.1269749/1‑94 (MQ=60)
CCGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCAT > SRR4302533.3556487/1‑94 (MQ=60)
CCGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCAT > SRR4302533.4514002/1‑94 (MQ=60)
GAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTA < SRR4302533.2214690/94‑1 (MQ=60)
GAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTA > SRR4302533.357041/1‑94 (MQ=60)
GAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTA > SRR4302533.5387366/1‑94 (MQ=60)
GAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTA > SRR4302533.5387367/1‑94 (MQ=60)
ACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACA > SRR4302533.1761724/1‑94 (MQ=60)
CTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAAC > SRR4302533.676808/1‑94 (MQ=60)
CTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAAC < SRR4302533.2876931/94‑1 (MQ=60)
CTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAAC > SRR4302533.1738220/1‑94 (MQ=60)
TTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACA > SRR4302533.1097327/1‑94 (MQ=60)
TTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACA < SRR4302533.2657160/94‑1 (MQ=60)
TTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAACATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACA < SRR4302533.1415810/94‑1 (MQ=60)
TCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAG < SRR4302533.5119462/94‑1 (MQ=60)
CAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGC > SRR4302533.4327429/1‑94 (MQ=60)
CAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGC < SRR4302533.2846752/94‑1 (MQ=60)
CAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGC > SRR4302533.3428761/1‑94 (MQ=60)
CAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGAGAGAATCGCGATTTTTACATCCATTAAACCATTACAACAGC > SRR4302533.2168020/1‑94 (MQ=60)
AAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAG < SRR4302533.4958497/94‑1 (MQ=60)
AATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGT > SRR4302533.3128515/1‑94 (MQ=60)
ATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTT > SRR4302533.2780639/1‑94 (MQ=60)
ATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTT < SRR4302533.3266397/94‑1 (MQ=60)
ATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTT > SRR4302533.4975346/1‑94 (MQ=60)
TACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGA < SRR4302533.972224/94‑1 (MQ=60)
ACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAA < SRR4302533.4206062/94‑1 (MQ=60)
ACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAA > SRR4302533.5459852/1‑94 (MQ=60)
CTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAA > SRR4302533.557542/1‑94 (MQ=60)
TTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAA > SRR4302533.3214189/1‑94 (MQ=60)
TTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAA > SRR4302533.1756858/1‑94 (MQ=60)
TTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAAC < SRR4302533.3441589/94‑1 (MQ=60)
TGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACG > SRR4302533.1539403/1‑94 (MQ=60)
GATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGT > SRR4302533.1299463/1‑94 (MQ=60)
GATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGT > SRR4302533.1253475/1‑94 (MQ=60)
TGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGA > SRR4302533.1698124/1‑94 (MQ=60)
TGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGA > SRR4302533.2536074/1‑94 (MQ=60)
TGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGA < SRR4302533.1643736/94‑1 (MQ=60)
TGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGA > SRR4302533.2889952/1‑94 (MQ=60)
CCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAAC < SRR4302533.91405/94‑1 (MQ=60)
CCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAAC < SRR4302533.3126988/94‑1 (MQ=60)
CGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACG < SRR4302533.3865493/94‑1 (MQ=60)
CCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTC < SRR4302533.5361242/94‑1 (MQ=60)
CCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTC > SRR4302533.5206552/1‑94 (MQ=60)
CGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCA > SRR4302533.1469167/1‑94 (MQ=60)
CGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCA > SRR4302533.3456961/1‑94 (MQ=60)
CGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGATGAAAACGTGACAACGTCC > SRR4302533.1847059/1‑94 (MQ=60)
GCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCAC > SRR4302533.4036374/1‑94 (MQ=60)
CATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACT < SRR4302533.3623716/94‑1 (MQ=60)
CATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACT > SRR4302533.6215992/1‑94 (MQ=60)
CATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACT > SRR4302533.2518366/1‑94 (MQ=60)
CATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACT < SRR4302533.2407082/94‑1 (MQ=60)
AAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAG < SRR4302533.5705040/94‑1 (MQ=60)
AAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAG > SRR4302533.5070040/1‑94 (MQ=60)
ATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGC < SRR4302533.82105/94‑1 (MQ=60)
ATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGC > SRR4302533.3765112/1‑94 (MQ=60)
ACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAA < SRR4302533.2577616/94‑1 (MQ=60)
CCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAAT < SRR4302533.5292626/94‑1 (MQ=60)
CCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAAT < SRR4302533.4422289/94‑1 (MQ=60)
CGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATC > SRR4302533.4070605/1‑94 (MQ=60)
CGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATC > SRR4302533.571062/1‑94 (MQ=60)
GGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCA > SRR4302533.3041425/1‑94 (MQ=60)
GGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCA < SRR4302533.5872717/94‑1 (MQ=60)
GATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCAT < SRR4302533.191580/94‑1 (MQ=60)
ATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATG < SRR4302533.5847883/94‑1 (MQ=60)
ATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATG < SRR4302533.3949441/94‑1 (MQ=60)
TGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGA < SRR4302533.3116634/94‑1 (MQ=60)
GACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAA > SRR4302533.1417518/1‑94 (MQ=60)
CCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAGCGTGACAACGTCACTGAGGCAATCATGAAAC < SRR4302533.1455184/94‑1 (MQ=60)
CCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAAC > SRR4302533.4841457/1‑94 (MQ=60)
CAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACC < SRR4302533.5935114/94‑1 (MQ=60)
CAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACC > SRR4302533.595745/1‑94 (MQ=60)
CAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACC < SRR4302533.4903311/94‑1 (MQ=60)
CAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACC > SRR4302533.2232289/1‑94 (MQ=60)
AATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCA > SRR4302533.5479451/1‑94 (MQ=60)
ATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCAC > SRR4302533.1742644/1‑94 (MQ=60)
ATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCAC > SRR4302533.2166496/1‑94 (MQ=60)
ATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCAC > SRR4302533.1107186/1‑94 (MQ=60)
TATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACT > SRR4302533.1834717/1‑94 (MQ=60)
TATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACT < SRR4302533.5096710/94‑1 (MQ=60)
TATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATAATGAAACAACT > SRR4302533.2418361/1‑94 (MQ=60)
ATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTT < SRR4302533.4477910/94‑1 (MQ=60)
ATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTT < SRR4302533.1232935/94‑1 (MQ=60)
ATGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTT < SRR4302533.3309535/94‑1 (MQ=60)
TGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTT < SRR4302533.5276320/94‑1 (MQ=60)
TGCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTT < SRR4302533.6258078/94‑1 (MQ=60)
GCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTC < SRR4302533.3573311/94‑1 (MQ=60)
GCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTC < SRR4302533.3573310/94‑1 (MQ=60)
GCAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTC < SRR4302533.4812731/94‑1 (MQ=60)
CAGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCA < SRR4302533.760889/94‑1 (MQ=60)
AGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCAT > SRR4302533.472650/1‑94 (MQ=60)
AGGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCAT < SRR4302533.5317030/94‑1 (MQ=60)
GGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATC < SRR4302533.4118943/94‑1 (MQ=60)
GGGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATC < SRR4302533.384655/94‑1 (MQ=60)
GGCGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCC < SRR4302533.3640863/94‑1 (MQ=60)
CGAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGC > SRR4302533.4689116/1‑94 (MQ=60)
GAATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCA > SRR4302533.1507694/1‑94 (MQ=60)
ATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAAT > SRR4302533.2239513/1‑94 (MQ=60)
ATCGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAAT > SRR4302533.2075855/1‑94 (MQ=60)
CGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAG < SRR4302533.2304407/94‑1 (MQ=60)
CGCGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAG < SRR4302533.947266/94‑1 (MQ=60)
CGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCA > SRR4302533.4908953/1‑94 (MQ=60)
CGCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCA < SRR4302533.5707021/94‑1 (MQ=60)
GCTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAG < SRR4302533.1521390/94‑1 (MQ=60)
CTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGC > SRR4302533.3584685/1‑94 (MQ=60)
CTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGC > SRR4302533.5484413/1‑94 (MQ=60)
CTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGC > SRR4302533.5610078/1‑94 (MQ=60)
CTTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCAGCAATAGCAGC > SRR4302533.482214/1‑94 (MQ=60)
TTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCT < SRR4302533.5913969/94‑1 (MQ=60)
TTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCT > SRR4302533.5503578/1‑94 (MQ=60)
TTTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCT < SRR4302533.5008974/94‑1 (MQ=60)
TTTTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAAAGTCACTGAGGCAATCATGAAACCACTCTCCTCCGCAATAGCAGCTG > SRR4302533.1313978/1‑94 (MQ=60)
TTACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCG < SRR4302533.911933/94‑1 (MQ=60)
TACATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAGCGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGC > SRR4302533.4460110/1‑94 (MQ=60)
CATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTT > SRR4302533.174247/1‑94 (MQ=60)
CATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTT > SRR4302533.6000578/1‑94 (MQ=60)
ATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTA < SRR4302533.2628465/94‑1 (MQ=60)
ATCCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTA > SRR4302533.6064804/1‑94 (MQ=60)
CCATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATT > SRR4302533.5593807/1‑94 (MQ=60)
CATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTC > SRR4302533.6082944/1‑94 (MQ=60)
ATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCT < SRR4302533.3858116/94‑1 (MQ=60)
ATTAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCT > SRR4302533.6138271/1‑94 (MQ=60)
TAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCTCT < SRR4302533.3802142/94‑1 (MQ=60)
TAAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCTCT < SRR4302533.3288210/94‑1 (MQ=60)
AAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCTCTT > SRR4302533.348229/1‑94 (MQ=60)
AAACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCTCTT < SRR4302533.452529/94‑1 (MQ=60)
AACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCTCTTT < SRR4302533.2238939/94‑1 (MQ=60)
AACCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCTCTTT < SRR4302533.3268831/94‑1 (MQ=60)
CCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCTCTTTTC > SRR4302533.5751290/1‑94 (MQ=60)
CCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATAAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCTCTTTTC < SRR4302533.2700314/94‑1 (MQ=60)
|
GACCCGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAATCATTACAACAGCTAGTTGAAAACGTGACAACGTCACTGAGGCAATCATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCTCTTTTC > NC_000913/1617873‑1618059
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
