Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,619,900 |
T→C |
V182A (GTA→GCA) |
ydeF → |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,619,900 | 0 | T | C | 100.0%
| 723.4
/ NA
| 221 | V182A (GTA→GCA) | ydeF | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (110/111); total (110/111) |
Only 100 of 226 total aligned reads displayed.
GCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGTAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGTTTA > NC_000913/1619810‑1619989
|
cACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCaaa < 2:1923683/93‑1 (MQ=255)
aCGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAg < 1:4272760/93‑1 (MQ=255)
aCGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAg < 2:4385777/93‑1 (MQ=255)
aCGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAg < 2:2034339/93‑1 (MQ=255)
cGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAgc < 1:1009812/93‑1 (MQ=255)
cGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAgc < 1:1589937/93‑1 (MQ=255)
cGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAgc > 2:3671941/1‑93 (MQ=255)
gCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAgcg > 2:2867625/1‑93 (MQ=255)
gCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAgcg > 2:380470/1‑93 (MQ=255)
cTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAgcgc > 1:1822069/1‑93 (MQ=255)
tGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCa < 1:492352/93‑1 (MQ=255)
tGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCa > 2:2338905/1‑93 (MQ=255)
gTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAg > 1:4936207/1‑93 (MQ=255)
gTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAg > 2:4287349/1‑93 (MQ=255)
ttGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGc < 2:1629835/93‑1 (MQ=255)
ttGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGc < 2:4702883/93‑1 (MQ=255)
tGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCg < 1:1064931/93‑1 (MQ=255)
tAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCgaga > 1:4277741/1‑93 (MQ=255)
aTGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGaaa > 1:5699931/1‑93 (MQ=255)
agagCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAatca > 2:5024127/1‑93 (MQ=255)
agagCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAatca > 1:5362996/1‑93 (MQ=255)
gagCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAatcat < 1:2819115/93‑1 (MQ=255)
gagCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAatcat > 2:3439853/1‑93 (MQ=255)
agCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAatcatc > 2:3122826/1‑93 (MQ=255)
agCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCAATCAAATTTGGGCAAAGCGCAGCGAGAAAatcatc < 1:5747938/93‑1 (MQ=255)
aTCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGcc > 1:3159248/1‑93 (MQ=255)
aTCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGcc < 1:1352134/93‑1 (MQ=255)
aTCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGcc < 2:1269728/93‑1 (MQ=255)
tCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCa > 1:6155910/1‑93 (MQ=255)
tCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCa > 1:3448883/1‑93 (MQ=255)
cAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCAc > 1:2492654/1‑93 (MQ=255)
cAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCAc > 1:722151/1‑93 (MQ=255)
aaTCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACg < 2:5247392/93‑1 (MQ=255)
tCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGa > 1:3735541/1‑93 (MQ=255)
tGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGaaa < 1:3807951/93‑1 (MQ=255)
tGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGaaa > 1:5615423/1‑93 (MQ=255)
gCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAAc < 1:1498803/93‑1 (MQ=255)
cccTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACa > 1:5029451/1‑93 (MQ=255)
cccTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACa < 2:2433864/93‑1 (MQ=255)
cTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAgg > 2:3320527/1‑93 (MQ=255)
ttCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGc < 2:3981094/93‑1 (MQ=255)
ttCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGc > 1:610889/1‑93 (MQ=255)
ttCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGc < 2:5521749/93‑1 (MQ=255)
ctggctggCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAg < 2:4244508/93‑1 (MQ=255)
ctggctggCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAg < 2:797059/93‑1 (MQ=255)
ctggctggCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAg > 2:6236400/1‑93 (MQ=255)
ggctggcAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAgtg < 1:360231/93‑1 (MQ=255)
ggctggcAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAgtg < 1:44389/93‑1 (MQ=255)
ggctggcAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAgtg > 1:2082153/1‑93 (MQ=255)
ctggcAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTc < 2:4075853/93‑1 (MQ=255)
ctggcAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTc < 1:1950929/93‑1 (MQ=255)
gcAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTgg > 2:4193125/1‑93 (MQ=255)
aGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTc > 1:5478252/1‑93 (MQ=255)
gCTATCTGTTCCGCGTTTCCCATTCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCg > 2:5098886/1‑93 (MQ=255)
gCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCg > 2:5930960/1‑93 (MQ=255)
cTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGc > 1:227766/1‑93 (MQ=255)
tATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGcc > 2:1811749/1‑93 (MQ=255)
aTCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCg > 1:6035344/1‑93 (MQ=255)
tGTTCCGCGTTTGCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGACAGTGTCTGGTTGCCGaaa > 1:1752881/1‑93 (MQ=255)
tGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGaaa < 1:5266778/93‑1 (MQ=255)
tGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGGGTCTGGTCGCCGaaa < 1:4175487/93‑1 (MQ=255)
ttCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGt > 2:4439202/1‑93 (MQ=255)
cgcgTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGtttt < 2:393974/93‑1 (MQ=255)
gcgTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTtta < 2:923762/93‑1 (MQ=255)
gcgTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTtta < 1:2786412/93‑1 (MQ=255)
cgTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTttat > 1:1125870/1‑93 (MQ=255)
cgTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTttat > 2:516381/1‑93 (MQ=255)
cgTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTttat > 1:4602084/1‑93 (MQ=255)
gTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTttatt > 1:197372/1‑93 (MQ=255)
tttCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTttatta > 1:3117480/1‑93 (MQ=255)
tCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACa > 2:5993657/1‑93 (MQ=255)
cccATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACaa < 2:3593758/93‑1 (MQ=255)
cccATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACaa > 2:242037/1‑93 (MQ=255)
cccATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACaa < 2:3496380/93‑1 (MQ=255)
ccATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAg > 1:4853407/1‑93 (MQ=255)
cATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGa < 2:1683024/93‑1 (MQ=255)
aTGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGAt > 2:2964960/1‑93 (MQ=255)
aTGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGAt < 2:5175377/93‑1 (MQ=255)
tGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATa < 1:2337345/93‑1 (MQ=255)
cTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATaaa > 2:3007848/1‑93 (MQ=255)
cTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATaaa < 2:489315/93‑1 (MQ=255)
ttttCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAg > 2:5842949/1‑93 (MQ=255)
tttCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGc > 2:1407752/1‑93 (MQ=255)
tttCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGc < 2:57006/93‑1 (MQ=255)
tttCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGc < 2:327558/93‑1 (MQ=255)
tcattcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCAc < 2:2725409/93‑1 (MQ=255)
tcattcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCAc < 2:1599343/93‑1 (MQ=255)
tcattcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCAc < 1:1623588/93‑1 (MQ=255)
cattcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACt > 1:521035/1‑93 (MQ=255)
attcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACtg < 1:3305178/93‑1 (MQ=255)
ttcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACtgt > 2:3847581/1‑93 (MQ=255)
tcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACtgtt < 2:860760/93‑1 (MQ=255)
tcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACtgtt < 1:1215583/93‑1 (MQ=255)
aaaTTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACtgttgt < 2:1919428/93‑1 (MQ=255)
aaaTTGGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACtgttgt < 2:1571429/93‑1 (MQ=255)
aaTTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTtgtg < 1:2708380/93‑1 (MQ=255)
aaTTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTtgtg > 1:663629/1‑93 (MQ=255)
tttGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGt > 1:3042131/1‑93 (MQ=255)
tGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGttt > 2:636963/1‑93 (MQ=255)
gggCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGTTTa > 2:6290857/1‑93 (MQ=255)
|
GCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGTAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGTTTA > NC_000913/1619810‑1619989
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGTAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGTTTACCTG > NC_000913/1619807‑1619993
|
TCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGC > SRR4302533.5530536/1‑94 (MQ=60)
TCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGC < SRR4302533.2655002/94‑1 (MQ=60)
CGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCA > SRR4302533.2042474/1‑94 (MQ=60)
CGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCA < SRR4302533.2663264/94‑1 (MQ=60)
CACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAG > SRR4302533.3575107/1‑94 (MQ=60)
ACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGC < SRR4302533.4298473/94‑1 (MQ=60)
CGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCG < SRR4302533.1015717/94‑1 (MQ=60)
CGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCG > SRR4302533.2818356/1‑94 (MQ=60)
CGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCG < SRR4302533.1599553/94‑1 (MQ=60)
GCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGC > SRR4302533.1833200/1‑94 (MQ=60)
GCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGC > SRR4302533.2444353/1‑94 (MQ=60)
GCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGC < SRR4302533.6164345/94‑1 (MQ=60)
TGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAG < SRR4302533.495294/94‑1 (MQ=60)
TGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAG > SRR4302533.4966094/1‑94 (MQ=60)
TGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGA < SRR4302533.1071185/94‑1 (MQ=60)
GTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGA > SRR4302533.4307133/1‑94 (MQ=60)
GTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGA > SRR4302533.4303466/1‑94 (MQ=60)
AATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAA > SRR4302533.5734352/1‑94 (MQ=60)
CAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCA > SRR4302533.5395205/1‑94 (MQ=60)
CAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCA < SRR4302533.4977487/94‑1 (MQ=60)
AGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCAT < SRR4302533.4299531/94‑1 (MQ=60)
GAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATC < SRR4302533.2836461/94‑1 (MQ=60)
AGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCG > SRR4302533.2583556/1‑94 (MQ=60)
AGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCAATCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCG < SRR4302533.5782614/94‑1 (MQ=60)
CATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCC > SRR4302533.3178691/1‑94 (MQ=60)
CATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCC > SRR4302533.2347259/1‑94 (MQ=60)
ATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCA > SRR4302533.3470176/1‑94 (MQ=60)
ATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCA > SRR4302533.3746596/1‑94 (MQ=60)
ATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCA > SRR4302533.1070924/1‑94 (MQ=60)
ATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCA > SRR4302533.1550/1‑94 (MQ=60)
ATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCA < SRR4302533.1360266/94‑1 (MQ=60)
ATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCA > SRR4302533.6192944/1‑94 (MQ=60)
ATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCA > SRR4302533.1820057/1‑94 (MQ=60)
TCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCAC > SRR4302533.2508008/1‑94 (MQ=60)
TCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCAC > SRR4302533.726414/1‑94 (MQ=60)
ATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGA < SRR4302533.1629673/94‑1 (MQ=60)
ATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGA > SRR4302533.3758459/1‑94 (MQ=60)
ATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGA < SRR4302533.4035867/94‑1 (MQ=60)
TCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAA < SRR4302533.495391/94‑1 (MQ=60)
TCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAA > SRR4302533.5289643/1‑94 (MQ=60)
CTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAA > SRR4302533.5649366/1‑94 (MQ=60)
TGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAAC < SRR4302533.3831245/94‑1 (MQ=60)
GCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACA < SRR4302533.1507834/94‑1 (MQ=60)
GCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACA > SRR4302533.4280310/1‑94 (MQ=60)
GCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACA > SRR4302533.5059902/1‑94 (MQ=60)
CCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAG < SRR4302533.4546751/94‑1 (MQ=60)
CCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAG < SRR4302533.5039264/94‑1 (MQ=60)
CCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGAGCAGCGAGAAAATCATCGCCACGGAAACAGG > SRR4302533.1970312/1‑94 (MQ=60)
CCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAANTTNGGCAAAGCNCAGCGANNNANTCATCNCNACngnnnangg > SRR4302533.1242989/1‑85 (MQ=60)
CTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCACATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGC > SRR4302533.4536563/1‑94 (MQ=60)
CTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGC > SRR4302533.614480/1‑94 (MQ=60)
CTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGC > SRR4302533.5442262/1‑94 (MQ=60)
TGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTG > SRR4302533.2094968/1‑94 (MQ=60)
GGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGT < SRR4302533.44692/94‑1 (MQ=60)
GGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGT < SRR4302533.362422/94‑1 (MQ=60)
CTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCT < SRR4302533.3137101/94‑1 (MQ=60)
CTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCT < SRR4302533.1962818/94‑1 (MQ=60)
CTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCT < SRR4302533.4145382/94‑1 (MQ=60)
CTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCT < SRR4302533.1658883/94‑1 (MQ=60)
TGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTG < SRR4302533.3079282/94‑1 (MQ=60)
TGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTG < SRR4302533.109370/94‑1 (MQ=60)
GCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGT < SRR4302533.5467000/94‑1 (MQ=60)
CAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTC < SRR4302533.5085810/94‑1 (MQ=60)
CAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTC > SRR4302533.2742129/1‑94 (MQ=60)
CAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTC > SRR4302533.5511276/1‑94 (MQ=60)
AGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCG < SRR4302533.4665057/94‑1 (MQ=60)
GCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGC > SRR4302533.2252625/1‑94 (MQ=60)
GCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGC > SRR4302533.229182/1‑94 (MQ=60)
GCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGC > SRR4302533.3194802/1‑94 (MQ=60)
CTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCC < SRR4302533.311552/94‑1 (MQ=60)
TATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCG > SRR4302533.5763690/1‑94 (MQ=60)
TATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCG > SRR4302533.6071919/1‑94 (MQ=60)
TCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAA > SRR4302533.3590301/1‑94 (MQ=60)
CTGTTCCGCGTTTGCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGACAGTGTCTGGTTGCCGAAA > SRR4302533.1763559/1‑94 (MQ=60)
TGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAG < SRR4302533.1476626/94‑1 (MQ=60)
TGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAG > SRR4302533.2509935/1‑94 (MQ=60)
TGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAG < SRR4302533.5298379/94‑1 (MQ=60)
TGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGGGTCTGGTCGCCGAAAG < SRR4302533.4200788/94‑1 (MQ=60)
CCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTT > SRR4302533.6039593/1‑94 (MQ=60)
CCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTT > SRR4302533.1345568/1‑94 (MQ=60)
CCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTT < SRR4302533.5665475/94‑1 (MQ=60)
GCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTAT > SRR4302533.4629966/1‑94 (MQ=60)
GCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTAT < SRR4302533.1272427/94‑1 (MQ=60)
GCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTAT > SRR4302533.1132556/1‑94 (MQ=60)
GCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTAT < SRR4302533.2803535/94‑1 (MQ=60)
GCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTAT > SRR4302533.5375955/1‑94 (MQ=60)
CGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATT > SRR4302533.198615/1‑94 (MQ=60)
GTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTA > SRR4302533.3136646/1‑94 (MQ=60)
TTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTAC > SRR4302533.672242/1‑94 (MQ=60)
TTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACA > SRR4302533.5528033/1‑94 (MQ=60)
TCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAA > SRR4302533.2873810/1‑94 (MQ=60)
CCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTAGAAG > SRR4302533.6310879/1‑94 (MQ=60)
CCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAG > SRR4302533.4882819/1‑94 (MQ=60)
CATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGAT < SRR4302533.382207/94‑1 (MQ=60)
ATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATA > SRR4302533.3445311/1‑94 (MQ=60)
ATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATA < SRR4302533.2079419/94‑1 (MQ=60)
ATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATA > SRR4302533.2024638/1‑94 (MQ=60)
TGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAA < SRR4302533.2351812/94‑1 (MQ=60)
CTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAG < SRR4302533.725252/94‑1 (MQ=60)
CTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAG > SRR4302533.1721042/1‑94 (MQ=60)
TCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACT > SRR4302533.524125/1‑94 (MQ=60)
TCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACT < SRR4302533.1633422/94‑1 (MQ=60)
ATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGT < SRR4302533.3325588/94‑1 (MQ=60)
ATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGT > SRR4302533.591833/1‑94 (MQ=60)
TTCAAATGTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTT < SRR4302533.1836293/94‑1 (MQ=60)
TCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTG < SRR4302533.1222885/94‑1 (MQ=60)
AAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTG > SRR4302533.667546/1‑94 (MQ=60)
AATTTGGGCAAAGCGCAGCGAGAAAATCGTCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGG < SRR4302533.6098779/94‑1 (MQ=60)
AATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGG < SRR4302533.4928191/94‑1 (MQ=60)
AATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGG < SRR4302533.1174795/94‑1 (MQ=60)
AATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGG < SRR4302533.2724997/94‑1 (MQ=60)
ATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGT > SRR4302533.3060752/1‑94 (MQ=60)
GGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGTTTAC > SRR4302533.2972586/1‑94 (MQ=60)
GGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGTTTAC > SRR4302533.836620/1‑94 (MQ=60)
GCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGTTTACCT < SRR4302533.2933467/94‑1 (MQ=60)
CAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGTTTACCTG < SRR4302533.1546065/94‑1 (MQ=60)
CAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGTTTACCTC > SRR4302533.3086832/1‑94 (MQ=60)
|
TCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGTAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGTTTACCTG > NC_000913/1619807‑1619993
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
